Distribution of dimethylsulfide and dimethylsulfoniopropionate and its relation with phytoneuston in the surface microlayer of the western North Atlantic during summer

One of the key steps towards predicting dimethylsulfide (DMS) emission to the atmosphere is to understand the distribution and cycling of biogenic sulfur in the microlayer. In this study, we examined the distribution of DMS and dissolved and particulate fractions of dimethylsulfoniopropionate (DMSPd and DMSPp) in the surface microlayer and bulk water of the western North Atlantic during July 2003. DMS concentrations in the bulk water varied from 0.71 to 7.65 nM. In contrast, DMS concentrations in the surface microlayer were fairly low (0.17–1.33 nM). Average concentrations of DMSPd and DMSPp in the bulk water were 2.09 (1.87–6.25) and 44.1 (8.06–119.8) nM, respectively, and those in the surface microlayer were 15.4 (4.06–54.3) and 29.9 (7.32–97.0) nM. In general, DMS was depleted in the microlayer (mean concentration: 0.60 nM) relative to the bulk water (mean concentration: 2.38 nM) with enrichment factors (the ratio of the microlayer concentration to bulk water concentration) ranging from 0.13 to 0.54. There was no consistent enrichment of DMSPp and chlorophyll a in the microlayer. On the contrary, DMSPd appeared to be highly enriched in the microlayer with an average EF of 4.89. The concentration of phaeopigments was also generally greater in the microlayer than in the bulk water, presumably due to enhanced photo-oxidation of chlorophyll a under high surface light intensities in the microlayer. In the study area, the concentration of DMSPp was significantly correlated with the abundance of dinoflagellates in the microlayer. Moreover, a significant correlation between the distributions of DMS, DMSPp, chlorophyll a and phaeopigment concentrations in the microlayer and the bulk water demonstrated that the biogenic materials in the microlayer come primarily from the bulk water below.     

Degradation of arsenobetaine to inorganic arsenic by bacteria in seawater

The substances suspended in seawater were fractionated by membrane filtration into three fractions. Fraction 1 was collected on a membrane filter of 0.22 µm pore-size, fraction 2 on a 5 µm pore-size and fraction 3 on 0.22 µm pore-size from the filtrate passed through the 5 µm membrane filter. Arsenobetaine was incubated with each of these fractions in two media (ZoBell 2216E and a solution of inorganic salts) at 25 °C in the dark under aerobic conditions. The mixture added with fraction 3 was considered to contain only bacteria. In every case, in the inorganic salt medium, inorganic arsenic(V) was derived from arsenobetaine via trimethylarsine oxide. In the ZoBell medium, arsenobetaine was not degraded to inorganic arsenic, although trimethylarsine oxide was derived in every case. We conclude that the degradation of arsenobetaine to trimethylarsine oxide or inorganic arsenic can be accomplished in seawater by bacteria alone.     

Photosynthetic capacity at the surface microlayer during the mixing period

The pbytoplankton biomass and primary production of the seasurface microlayer (upper 3 mm) and the bulk water (1, 10, 20,30 and 40 m) were investigated in Saronicos Gulf, Aegean Sea,during the period of November-December 1987. The experimentswere performed by using newly developed sampling and incubationin situ techniques regarding the surface microlayer. In thewell mixed water column, maximum assimilation ratios rangingfrom 2.63 to 10.97 mg C mg Chla^–1 h^–1 were recordedat 1 m depth and these values were reduced to {small tilde}45%at the surface microlayer regardless of the uniform distributionof chlorophyll a in these layers. The 1% light level variedbetween 20 and 40 m depth and the assimilation ratio at thislevel averaged 12% in relation to the maximum value at 1 m depth.The problems associated with the static bottle incubations andthe type of glass of the bottles used are discussed with respectto the photosynthetic measurements at the surface microlayer.     

Enrichment and Association of Bacteria and Particulates in Salt Marsh Surface Water

Elevated counts of bacteria were found during outgoing tides in surface microlayers (~300 μm) of Sippewissett salt marsh, Falmouth, Massachusetts, and Palo Alto salt marsh, Palo Alto, California. At both sampling sites, the degrees by which bacteria were concentrated into the surface microlayer were linearly dependent upon surface concentration of particulate material. A significant percentage of bacteria in the microlayer were found to be attached to particulate material, while bacterial populations in the subsurface water were largely planktonic. Proportions of the bacterial populations which could be grown on seawater nutrient agar were also greater in the microlayer than in the subsurface waters and were positively correlated with the fraction of bacteria attached to particulate matter. Data from these studies suggest that particulates in the microlayer waters of the salt marsh influenced the observed increase in both the readily grown and the total numbers of bacteria.     

Plant responses to past concentrations of CO2

The influence of recent historical changes in atmospheric CO₂ have been investigated by two methods: 1, the responses of leaf development and physiology as indicated by leaves stored in herbaria and 2, by investigating the differential growth responses of populations originating from naturally different CO₂ concentrations. Herbarium leaves indicate that stomatal density and leaf nitrogen have decreased over the last 150 to 200 years, while water use efficiency, estimated from leaf ¹³C and historical measurements of climate, has increased.Natural populations ofBoehmeria cylindrica were found growing at sites, in Florida, with CO₂ mole fractions varying naturally from 350 µmol mol^-1 to 505 µmol mol^-1. Plants were grown in the controlled environment, using seeds originating from populations occurring in the different CO₂ mole fractions. Plants from the different ambient CO₂ mole fractions showed different rates of growth and different non-linear responses of the shoot to root ratio in response to changes in the CO₂ mole fraction from 350 to 675 µmol mol^-1.The proposal that plants originating from high altitude will whow greater stimulations of growth with an increase in CO₂, than plants from low altitude, was rejected in experiments which simulated the atmospheric pressure at altitudes of 0 and 2000m, at CO₂ mole fractions of 350 and 700 µmol mol^-1 and on populations ofPlantago major originating from altitudes of 0 and 3335 m.     

Trophic cascading in the Polar Frontal Zone of the Southern Ocean during austral autumn 2002

Trophic cascading resulting from coupling among phytoplankton, protozooplankton (2–200 µm) and the mesozooplankton fractions <1,000 µm and <2,000 µm was investigated at three stations in the Polar Frontal Zone of the Southern Ocean during austral autumn 2002. In the absence of any grazers, net growth rate of the phytoplankton was positive and ranged between 0.209 and 0.402 day^–1. Among the heterotrophic components of the zooplankton, protozooplankton were identified as the most important consumers of the phytoplankton biomass. The low impact of the mesozooplankton on the phytoplankton may have been related to the inability of the larger grazers to feed efficiently on the small phytoplankton cells, which dominated the total chlorophyll concentration at two of the three sampling stations. It appears that the mesozooplankton <1,000 µm consumed protozooplankton, which resulted in a decrease in the impact of the latter organisms on the phytoplankton. The presence of predatory zooplankton (mainly chaetognaths and amphipods) >1,000 µm led to a decrease in the carnivory of the <1,000-µm mesozooplankton fraction on the protozooplankton. In this situation, protozooplankton were again able to exert a considerable impact on the phytoplankton.     

Dissolved organic carbon and bacterial populations in the gelatinous surface microlayer of a Norwegian fjord mesocosm

The sea surface microlayer is the interfacial boundary layer between the marine environment and the troposphere. Surface microlayer samples were collected during a fjord mesocosm experiment to study microbial assemblage dynamics within the surface microlayer during a phytoplankton bloom. Transparent exopolymer particles were significantly enriched in the microlayer samples, supporting the concept of a gelatinous surface film. Dissolved organic carbon and bacterial cell numbers (determined by flow cytometry) were weakly enriched in the microlayer samples. However, the numbers of Bacteria 16S rRNA genes (determined by quantitative real-time PCR) were more variable, probably due to variable numbers of bacterial cells attached to particles. The enrichment of transparent exopolymer particles in the microlayer and the subsequent production of a gelatinous biofilm have implications on air–sea gas transfer and the partitioning of organic carbon in surface waters.     

Seasonal variation in abundance and size structure of phytoplankton in Baie des Chaleurs,southwestern Gulf of St. Lawrence,in relation to physical oceanographic conditions

We investigated changes in the abundance and size structure of phytoplankton and organic seston in relation to temperature, stratification and current patterns at Gascons on the north shore of Baie des Chaleurs, eastern Canada. Phytoplankton biomass showed a general decrease during the study (May to November 1989), except for a brief diatom bloom in late October. During most of the summer, a strong temperature driven stratification was present and <5 µm cells dominated the phytoplankton community. Particles measuring <5 µm also dominated the particulate organic matter (POC and PON) throughout the year. However, only 40% of these particles could be associated with phytoplankton cells. For both particulate matter and phytoplankton, the abundance of the <5 µm size fraction was positively correlated with the Brunt-Väilsälä index of stability of the water column. Inorganic nitrogen may have limited the phytoplankton growth, as generally reported for stratified environments. Most of the biomass was probably supported by nitrogen regenerated through microbial organisms. A large bacterioplankton community was suggested by the abundance of small (<5 µm) non-phytoplanktonic particles with a low and relatively uniform C/N ratio. Larger particles were only abundant at the beginning of the study (May–June) and on one date in October. Their C/N ratios indicated they were of varied origins.     

Spatial variation in basic chemistry of streams draining a volcanic landscape on Costa Rica's Caribbean slope

Spatial variability in selected chemical, physical and biological parameters was examined in waters draining relatively pristine tropical forests spanning elevations from 35 to 2600 meters above sea level in a volcanic landscape on Costa Rica's Caribbean slope. Waters were sampled within three different vegetative life zones and two transition zones. Water temperatures ranged from 24–25 °C in streams draining lower elevations (35–250 m) in tropical wet forest, to 10 °C in a crater lake at 2600 m in montane forest. Ambient phosphorus levels (60–300 µg SRP L^–1; 66–405 µg TP L^–1) were high at sites within six pristine drainages at elevations between 35–350 m, while other undisturbed streams within and above this range in elevation were low (typically <30.0 µg SRP L^–1). High ambient phosphorus levels within a given stream were not diagnostic of riparian swamp forest. Phosphorus levels (but not nitrate) were highly correlated with conductivity, Cl, Na, Ca, Mg and SO₄. Results indicate two major stream types: 1) phosphorus-poor streams characterized by low levels of dissolved solids reflecting local weathering processes; and 2) phosphorus-rich streams characterized by relatively high Cl, SO₄, Na, Mg, Ca and other dissolved solids, reflecting dissolution of basaltic rock at distant sources and/or input of volcanic brines. Phosphorus-poor streams were located within the entire elevation range, while phosphorus-rich streams were predominately located at the terminus of Pleistocene lava flows at low elevations. Results indicate that deep groundwater inputs, rich in phosphorus and other dissolved solids, surface from basaltic aquifers at breaks in landform along faults and/or where the foothills of the central mountain range merge with the coastal plain.     

Comparative analysis between protist communities from the deep‐sea pelagic ecosystem and specific deep hydrothermal habitats

Protist communities associated with deep seawater and bivalves from six hydrothermal sites in the Pacific Ocean were characterized by microscopy and molecular rRNA gene surveys (18S rRNA) and compared with planktonic communities from Pacific deep‐pelagic seawater (from 500 to 3000 m in depth). Genetic libraries from larger size fractions (> 3 µm) of deep‐pelagic water were mainly dominated by Dinophyceae, whereas small size fractions (< 3 µm) mainly revealed radiolarians and Syndiniales. In contrast, more specific opportunistic detritivores and grazers, mostly belonging to Stramenopiles and Cercozoa, were detected from water surrounding vent chimneys. Protist communities were different in the pallial cavity of the giant hydrothermal bivalves Bathymodiolus thermophilus and Calyptogena magnifica, dominated by Ciliophora (primarily belonging to Phyllopharyngea, Oligohymenophorea and Oligotrichea) and Cercozoa. Interestingly, protist communities retrieved from the pallial cavity liquid of hydrothermal bivalves were remarkably homogeneous along the Southern East Pacific Rise, in contrast to bivalves collected on the Mid‐Atlantic Ridge hydrothermal vents and cold seeps from the Gulf of Mexico. Hence, complex protist communities seem to occur inside hydrothermal bivalves, and these metazoa may constitute a stable micro‐niche for micro‐eukaryotes, including grazers, detritivores, symbionts and potential parasites. From these communities, new lineages within the ciliates may emerge.     

Neustonic versus epiphytic bacteria of eutrophic lake and their biodegradation ability on deltamethrin

This study evaluated biodegradation of the insecticide deltamethrin (1 μg l⁻¹) by pure cultures of neustonic (n = 25) and epiphytic (n = 25) bacteria and by mixed cultures (n = 1), which consisted of a mixture of 25 bacterial strains isolated from the surface microlayer (SM ≈ 250 μm) and epidermis of the Common Reed (Phragmites australis, (Cav.) Trin. ex Steud.) growing in the littoral zone of eutrophic lake Chełmżyńskie. Results indicate that neustonic and epiphytic bacteria are characterized by a similar average capacity to degrade deltamethrin. After a 15-day incubation, bacteria isolated from the surface microlayer reduced the initial concentration of deltamethrin by 60%, while the average effectiveness of the bacteria found on the Common Reed equaled 47%.     

Distribution and Diversity of Bacteria in a Saline Meromictic Lake as Determined by PCR-DGGE of 16S rRNA Gene Fragments

The variations in vertical distribution and composition of bacteria in the meromictic Lake Faro (Messina, Italy) were analysed by culture-independent methods in two different mixing conditions. Water samples were collected from a central station from the surface to the bottom (30 m depth) on two different sampling dates—the first characterised by a well-mixed water mass and the second by a marked stratification. A ‘red-water’ layer, caused by a dense growth of photosynthetic sulphur bacteria, was present at a depth of 25 m in December 2005 and at 15 m in August 2006, defining two different zones in terms of their physicochemical properties. The vertical distribution of bacterioplankton showed that the interface zones were more densely populated than others. In both sampling periods, the highest numbers of live cells were observed within ‘red water’ layers. The dominant phylotypes of the bacterial community were determined by sequencing the Denaturing Gradient Gel Electrophoresis (DGGE) bands resulting from PCR amplification of 16S rRNA gene fragments. The number of DGGE bands, considered indicative of the total species richness, did not vary predictably across the two different sampling periods. Proteobacteria (α-, γ-, δ- and ε subclass members), Cytophaga–Flavobacterium–Bacteroides, green sulphur bacteria and Cyanobacteria were retrieved from Lake Faro. Most of the bands showed DNA sequences that did not match with other previously described organisms, suggesting the presence of new indigenous bacterial phylotypes.     

Propagation of excitation in surviving neocortical slices

Propagation of excitation was investigated in neocortical guinea-pig slices maintained in vitro. Stimuli were applied at different distances from the chosen neuron. A comparison between latencies of induced spike responses would point to complex structure and configuration of vertically oriented columnar array. Such arrays of relatively synchronously activated neurons have a narrow peak in layer II (of up to 300 µm), a broad central portion in layer V about 600 µm or above), and a narrower base in layer VI (of about 300 µm). Layer-by-layer diversity in excitation propagation was found within the array, moreover.Institute of Biological Physics, Academy of Sciences of the USSR, Pushchino-on-Oka. Translated from Neirofiziologiya, Vol. 22, No. 4, pp. 472–481, July–August, 1990.     

Isospora ptyodactyli n. sp. (Apicomplexa: Eimeriidae), a new coccidian parasite of the fan-footed gecko Ptyodactylus puiseuxi Boutan, 1893 (Reptilia: Gekkonidae) from Jordan

Faecal samples from 17 fan-footed geckoes Ptyodactylus puiseuxi Boutan were examined for coccidian parasites. Five geckoes (29%) were found to be passing oöcysts of the genus Isospora Schneider. Comparison with other members of the genus Isospora indicates that the coccidian found represents a new species. Sporulated oöcysts of I. ptyodactyli n. sp. are spherical or subspherical, 22.1 (19.0–24.0) × 21.2 (18.0–23.0) µm, with a shape-index (length/width) of 1.04; and a smooth and bilayered oöcyst wall, 1.0–1.5 µm thick. A micropyle, oöcyst residuum and polar granule are absent. The sporocysts are ellipsoidal, 12.2 (11.0–14.0) × 8.0 (7.5–9.0) µm, with a shape index of 1.5 (1.4–1.9). Stieda and substieda bodies are present, the Stieda body being knob-like and the substieda body spherical to subspherical. A sporocyst residuum is present and composed of numerous granules of different size scattered among the sporozoites. The sporozoites are vermiform, with a slightly granulated surface appearance, and are arranged head to tail within the sporocyst. Most oöcysts have still to sporulate when excreted; sporulation was completed within 12 h at 25 °C. Endogenous development occurs inside the nuclei of enterocytes in the small intestine.     

A laboratory study of feeding and assimilation in Euchlanis dilatata lucksiana

Feeding of Euchlanis dilatata lucksiana, a brachionid rotifer isolated from the Loosdrecht Lakes (The Netherlands), was examined in the laboratory using ¹⁴C-labelled food. The gut-filling time at a food concentration of 9.6 µg C ml^–1 was about 15 minutes. Animals which were fed on 3 size fractions of the lake seston (< 7 µm, 7–15 µm, and 15–33 µm) showed a clear preference (Jacobs' selectivity index) for the largest size fraction. This fraction was composed predominantly of filamentous cyanobacteria. For animals weighing 0.37–0.49 µm C ind.^–1 the daily ration (daily food consumption per unit body weight × 100) ranged from 50 to 100% at food levels of 2 mg C l^–1 and below, but increased to 150–250% at food concentrations of 5 mg C l^–1 and above. The assimilation efficiency was 100% up to 5 mg C l^–1 of food, but decreased to about 80% at higher food levels.     

Influence of phytoplankton fractions on growth and reproduction of tropical cladocerans

The influence of two seston fractions, < 20 µm (nanoplankton) and 20 µm (microplankton), on growth and reproduction of cladoceran species with different sizes, from Lake Monte Alegre, was evaluated through individual growth and life table experiments. Size, shape and other features of the algae in the fractions were described. The procedure of filtering lake water through a 20 µm net for seston fractionation caused mutual contamination. The smallest cladoceran species, Ceriodaphnia cornuta Sars and Moina micrura Kurz, produced larger clutch sizes and exhibited higher intrinsic rates of population growth (r) in the nanoplankton, despite contamination of their food by inedible algae. The largest species, Simocephalus mixtus Sars, produced larger clutch sizes in the microplankton. There were no differences in juvenile biomass growth between treatments for M. micrura and Daphnia gessneri Herbst, but lower value of the exponential growth rate (g) in the microplankton was significant for M. micrura. Fecundity (eggs/total female) of M. micrura was significantly lower in the microplankton, while D. gessneri did not reproduce in this fraction, at the end of growth experiments. Spines, colonies, cenobium, filaments, hard cell wall, and gelatinous sheaths, represented constraints to cladoceran reproductive performance, besides algae size. Microplankton contamination by nanoplanktonic algae, in the experiments, probably minimized the negative effect of inedible algae. Nanoplankton was more suitable for the smallest species and microplankton for the largest one.     

Geochemical composition,phosphorus speciation and mass transport of fine-grained sediment in two Lake Erie tributaries

The concentration of major elements (Si, Al, Ca, Mg, Na, K, Fe, Ti, Mn and P), particulate phosphorus forms (NH₄Cl-RP, BD-RP, NaOH-RP, HCl-RP and NaOH₍₈₅₎-RP) and carbon content were determined in six size fractions (<8, 8–12, 12–19, 19–31, 31–42 and 42–<60 µm) of sediment collected at gauging stations located in two Lake Erie tributaries (Big Creek and Big Otter Creek). Concentrations of major elements and phosphorus forms were remarkably similar in sediment size fractions from both rivers. Nonapatite inorganic P (NAIP) and organic P (OP) concentrations increased with decreasing grain size while apatite inorganic P (AIP) content decreased with decreasing grain size. Results of phosphorus fractionation studies were combined with historical (particle size) and hydrometric data to simulate the export of particle P on tributary sediment < 63 µm. AIP represents 67 and 70% of the calculated particulate P mass while NAIP accounts for 26 and 23% of sediment-bound P transported in Big Otter Creek and Big Creek, respectively. The < 8 µm size fraction of tributary sediment is the most significant for the potential release of bioavailable P into the water column.     

Mesh-size effects on drift sample composition as determined with a triple net sampler

Nested nets of three different mesh apertures were used to study mesh-size effects on drift collected in a small mountain stream. The innermost, middle, and outermost nets had, respectively, 425 µm, 209 µm and 106 µm openings, a design that reduced clogging while partitioning collections into three size groups. The open area of mesh in each net, from largest to smallest mesh opening, was 3.7, 5.7 and 8.0 times the area of the net mouth. Volumes of filtered water were determined with a flowmeter. The results are expressed as (1) drift retained by each net, (2) drift that would have been collected by a single net of given mesh size, and (3) the percentage of total drift (the sum of the catches from all three nets) that passed through the 425 µm and 209 µm nets. During a two day period in August 1986, Chironomidae larvae were dominant numerically in all 209 µm and 106 µm samples and midday 425 µm samples. Large drifters (Ephemerellidae) occurred only in 425 µm or 209 µm nets, but the general pattern was an increase in abundance and number of taxa with decreasing mesh size. Relatively more individuals occurred in the larger mesh nets at night than during the day. The two larger mesh sizes retained 70% of the total sediment/detritus in the drift collections, and this decreased the rate of clogging of the 106 µm net. If an objective of a sampling program is to compare drift density or drift rate between areas or sampling dates, the same mesh size should be used for all sample collection and processing. The mesh aperture used for drift collection should retain all species and life stages of significance in a study. The nested net design enables an investigator to test the adequacy of drift samples.     

Examination of a freshwater surface microlayer for diel changes in the bacterioneuston

The surface microlayer of a small freshwater pond was sampled every 6–8 hours on four occasions (April, July, September, and November) to examine changes in total and respiring bacterioneuston for diel cycles and comparing them to similar measurements of the bacterioplankton. Dissolved organic carbon (DOC), dissolved reactive phosphorous (DRP) and ammonia nitrogen (NH₃-N) were also measured. Both the mean numbers and enrichments of the two bacterial parameters in the surface microlayer samples showed seasonal differences, but in general, no significant difference (P > 0.05, ANOVA) in the mean numbers of total and respiring bacterioneuston were observed over diel periods except in November. The converse was true for the bacterioplankton. The presence of a visually thick surface film contributed to the results. The mean numbers of bacterioneuston and their enrichments were not correlated to any of the physical/chemical parameters measured.     

Direct detection of Vibrio cholerae and ctxA in Peruvian coastal water and plankton by PCR

Seawater and plankton samples were collected over a period of 17 months from November 1998 to March 2000 along the coast of Peru. Total DNA was extracted from water and from plankton grouped by size into two fractions (64 micro m to 202 micro m and >202 micro m). All samples were assayed for Vibrio cholerae, V. cholerae O1, V. cholerae O139, and ctxA by PCR. Of 50 samples collected and tested, 33 (66.0%) were positive for V. cholerae in at least one of the three fractions. Of these, 62.5% (n = 32) contained V. cholerae O1; ctxA was detected in 25% (n = 20) of the V. cholerae O1-positive samples. None were positive for V. cholerae O139. Thus, PCR was successfully employed in detecting toxigenic V. cholerae directly in seawater and plankton samples and provides evidence for an environmental reservoir for this pathogen in Peruvian coastal waters.