The effect of stratification and seasonal variability on the profile of an anaerobic swine waste treatment lagoon

In this study, the characterization of an anaerobic swine waste treatment lagoon from a farrowing operation (approximately 2000 sows) was carried out to examine the dynamics of the system due to stratification and seasonal variability. Swine waste samples were taken at different depths with a pulley system equipped with a special sampler that allows for sampling exclusively at certain depth. Chemicals and microbial dynamics were monitored throughout a one-year-period. Results showed that nutrient (C, N, P, S) concentrations varied according to stratified lagoon layers and season. Trace minerals (Al, Ca, Fe, and Mg), on the other hand, appeared to be affected more by stratification than seasonal variability. Molecular analysis also showed that microbial community structure appeared to be affected by the stratification and seasonal variability. Based on these data, it is important to consider the effect of stratification and seasonal variability in managing these open lagoons.     

Environmental science and management of coastal lagoons in the Southern Mediterranean Region: key issues revealed by the MELMARINA Project

Lagoons in the heavily populated, semi-arid coastal zone of the Southern Mediterranean Region exemplify the conflict between human utilisation of water and related resources and aquatic ecosystems. Having recognised the requirement to improve understanding of the functioning of the region’s coastal wetlands, the MELMARINA Project undertook integrated hydro-ecological monitoring and modelling within lagoons in Morocco, Tunisia and Egypt. This article highlights some key issues regarding environmental science and management of the region’s coastal lagoons revealed during the course of the project. It stresses the importance of hydrology as a key control upon lagoon functioning and ecosystem dynamics. Hydrological modifications due to water resource management schemes are the cause of many recent changes experienced within lagoons. Linkages between water quality, water availability, human activities and biological characteristics of coastal lagoons are discussed with particular reference to the controls upon vegetation within the MELMARINA lagoons. A series of methodological advances are reviewed which have potential for wider application within coastal lagoons. It is suggested that the use of lagoon sediment for environmental reconstruction can be invaluable, especially when monitoring data are lacking. Recent advances in instrumentation technologies make long-term continuous monitoring more feasible although these approaches can be combined with more traditional site surveys to provide wider spatial coverage at the expense of temporal resolution. Wider spatial coverage can also be achieved through the use of space-borne or aerial remote sensing imagery whilst longer-term trends in site characteristics can be assessed through historical map analyses. Geographical Information Systems, which facilitate the storage and interrogation of large and varied datasets, have enormous potential. Similarly, coupled hydro-ecological models can inform understanding of lagoon functioning and can assess scenarios associated with environmental change or alternative management approaches. The application of integrated, basin-wide approaches to the management of water resources and aquatic ecosystems in the Southern Mediterranean Region is advocated. This includes the application of principles from the EU’s Water Framework Directive. Finally, the need to place management in the context of climate change and associated sea level rise is stressed. Emphasis should be placed on the development of adaptation strategies designed to minimise the effects of these changes. Guest editors: J. R. Thompson & R. J. Flower Hydro-ecological Monitoring and Modelling of North African Coastal Lagoons     

Identification of bacterial populations in dairy wastewaters by use of 16S rRNA gene sequences and other genetic markers

Hydraulic flush waste removal systems coupled to solid/liquid separators and circulated treatment lagoons are commonly utilized to manage the large amounts of animal waste produced on high-intensity dairy farms. Although these systems are common, little is known about the microbial populations that inhabit them or how they change as they traverse the system. Using culture-based and non-culture-based methods, we characterized the microbial community structure of manure, water from the separator pit, and water from the circulated treatment lagoon from a large dairy in the San Joaquin Valley of California. Our results show that both total bacterial numbers and bacterial diversity are highest in manure, followed by the separator pit water and the lagoon water. The most prevalent phylum in all locations was the Firmicutes (low-G+C, gram-positive bacteria). The most commonly occurring operational taxonomic unit (OTU) had a 16S rRNA gene (rDNA) sequence 96 to 99% similar to that of Clostridium lituseburense and represented approximately 6% of the manure derived sequences, 14% of the separator pit-derived sequences and 20% of the lagoon-derived sequences. Also highly prevalent was an OTU with a 16S rDNA sequence 97 to 100% similar to that of Eubacterium tenue, comprising approximately 3% of the manure-derived sequences, 6% of the separator pit-derived sequences and 9% of the lagoon-derived sequences. Taken together, these sequences represent approximately one-third of the total organisms in the lagoon waters, suggesting that they are well adapted to this environment.     

Identification of Bacterial Populations in Dairy Wastewaters by Use of 16S rRNA Gene Sequences and Other Genetic Markers

Hydraulic flush waste removal systems coupled to solid/liquid separators and circulated treatment lagoons are commonly utilized to manage the large amounts of animal waste produced on high-intensity dairy farms. Although these systems are common, little is known about the microbial populations that inhabit them or how they change as they traverse the system. Using culture-based and non-culture-based methods, we characterized the microbial community structure of manure, water from the separator pit, and water from the circulated treatment lagoon from a large dairy in the San Joaquin Valley of California. Our results show that both total bacterial numbers and bacterial diversity are highest in manure, followed by the separator pit water and the lagoon water. The most prevalent phylum in all locations was the Firmicutes (low-G+C, gram-positive bacteria). The most commonly occurring operational taxonomic unit (OTU) had a 16S rRNA gene (rDNA) sequence 96 to 99% similar to that of Clostridium lituseburense and represented approximately 6% of the manure derived sequences, 14% of the separator pit-derived sequences and 20% of the lagoon-derived sequences. Also highly prevalent was an OTU with a 16S rDNA sequence 97 to 100% similar to that of Eubacterium tenue, comprising approximately 3% of the manure-derived sequences, 6% of the separator pit-derived sequences and 9% of the lagoon-derived sequences. Taken together, these sequences represent approximately one-third of the total organisms in the lagoon waters, suggesting that they are well adapted to this environment.     

Bacterial and archaeal phylogenetic diversity associated with swine sludge from an anaerobic treatment lagoon

Over the last decades, the demand for pork products has increased significantly, along with concern about suitable waste management. Anaerobic-lagoon fermentation for swine-sludge stabilization is a good strategy, although little is known about the microbial communities in the lagoons. Here, we employed a cloning- and sequencing-based analysis of the 16S rRNA gene to characterize and quantify the prokaryotic community composition in a swine-waste-sludge anaerobic lagoon (SAL). DNA sequence analysis revealed that the SAL library harbored 15 bacterial phyla: Bacteroidetes, Cloroflexi, Proteobacteria, Firmicutes, Deinococcus-Thermus, Synergystetes, Gemmatimonadetes, Chlorobi, Fibrobacteres, Verrucomicrobia and candidates division OP5, OP8, WWE1, KSB1, WS6. The SAL library was generally dominated by carbohydrate-oxidizing bacteria. The archaeal sequences were related to the Crenarchaeota and Euryarchaeota phyla. Crenarchaeota predominated in the library, demonstrating that it is not restricted to high-temperature environments, being also responsible for ammonium oxidation in the anaerobic lagoon. Euryarchaeota sequences were associated with the hydrogenotrophic methanogens (Methanomicrobiales and Methanobacteriales). Quantitative PCR analysis revealed that the number of bacterial cells was at least three orders of magnitude higher than the number of archaeal cells in the SAL. The identified prokaryotic diversity was ecologically significant, particularly the archaeal community of hydrogenotrophic methanogens, which was responsible for methane production in the anaerobic lagoon. This study provided insight into the archaeal involvement in the overall oxidation of organic matter and the production of methane. Therefore, the treatment of swine waste in the sludge anaerobic lagoon could represent a potential inoculum for the start-up of municipal solid-waste digesters.     

Survival of Escherichia coli O157:H7 in wastewater from dairy lagoons

AIM: To determine the survival of Escherichia coli O157:H7 in dairy wastewater from on-site holding lagoons equipped with or without circulating aerators. METHODS AND RESULTS: Survival was monitored in dairy lagoon microcosms equipped with or without scale-size circulators. Both laboratory strains of E. coli O157:H7 and an isolate of E. coli H7 from wastewater had poor survival rates and none proliferated in water from waste lagoons with or without circulators. Furthermore, the decline of E. coli O157:H7 was not enhanced in those microcosms equipped with circulators. Strain variation in survival was observed in both circulated and settling waters. The decline rate of E. coli O157:H7 Odwalla strain increased proportionately with the inoculum load. Escherichia coli failed to establish itself in wastewater even after four sequential inoculations simulating continuous faecal input into the lagoon. The native aerobic bacteria survived longer with a decimal reduction time of 21.3 days vs either introduced or native E. coli, which declined rapidly with decimal reduction time of 0.5-9.4 days. CONCLUSIONS: Escherichia coli O157:H7 failed to establish and proliferate in dairy wastewater microcosms equipped with or without circulating aerators. SIGNIFICANCE AND IMPACT OF THE STUDY: This study furthers our knowledge of pathogen survival in wastewater, and suggests that proper management of wastewater before its use in irrigation is essential to reduce pathogen transfer to crops.     

Bacterial population dynamics in dairy waste during aerobic and anaerobic treatment and subsequent storage

The objective of this study was to model a typical dairy waste stream, monitor the chemical and bacterial population dynamics that occur during aerobic or anaerobic treatment and subsequent storage in a simulated lagoon, and compare them to those of waste held without treatment in a simulated lagoon. Both aerobic and anaerobic treatment methods followed by storage effectively reduced the levels of total solids (59 to 68%), biological oxygen demand (85 to 90%), and sulfate (56 to 65%), as well as aerobic (83 to 95%), anaerobic (80 to 90%), and coliform (>99%) bacteria. However, only aerobic treatment reduced the levels of ammonia, and anaerobic treatment was more effective at reducing total sulfur and sulfate. The bacterial population structure of waste before and after treatment was monitored using 16S rRNA gene sequence libraries. Both treatments had unique effects on the bacterial population structure of waste. Aerobic treatment resulted in the greatest change in the type of bacteria present, with the levels of eight out of nine phyla being significantly altered. The most notable differences were the >16-fold increase in the phylum Proteobacteria and the approximately 8-fold decrease in the phylum Firmicutes. Anaerobic treatment resulted in fewer alterations, but significant decreases in the phyla Actinobacteria and Bacteroidetes, and increases in the phyla Planctomycetes, Spirochetes, and TM7 were observed.     

Local completion of the pelagic larval stage of coastal fishes in coral-reef lagoons of the Society and Tuamotu Islands

In four lagoons at two atolls and one high island in the Tuamotu and Society Islands, French Polynesia, plankton samples were taken weekly during 4 weeks in January/February 1989. A third atoll lagoon was sampled once. The lagoons varied in size and physical openness. We also sampled in the ocean near two atolls and the high island. All locations were sampled during the day, and three lagoons (two atolls and one high island) were also sampled at night. Pelagic fish eggs were more abundant in the ocean than in the lagoons at the atolls, but not at the high island. Larvae of coastal fishes were abundant in all lagoons. In the atoll lagoons, larvae of oceanic fishes were very rare to absent, but in the high-island lagoons and in the ocean, they were commonly encountered. In the ocean, larvae of many typical reef-fish taxa were abundant (58 taxa were represented by at least 10 individuals), but in the lagoons, most of these were rare or absent, and we conclude that these rare and absent taxa normally do not complete their larval phase in lagoons.Taxa were considered to be able to complete their pelagic phase in a lagoon (i.e., were 'completers') if they were present in the lagoon plankton samples from across a full larval size range. In the high-island barrier-reef lagoon, young, preflexion larvae were abundant, but only two taxa (of 56 captured) were present over a wide size range and were considered completers in this lagoon. In the high-island lagoonal bay, 11 taxa (of 67 captured) were considered completers. The numbers of taxa captured in the three atoll lagoons ranged from 39–44, and the number of taxa considered to be completers increased with increasing lagoon size and physical openness. The 17 completer taxa in the smallest, most enclosed atoll lagoon were, with one exception, a subset of those (18) in the second lagoon which, in turn, with one exception, were a subset of those in the largest, most open lagoon (26). Completer taxa were of the families Apogonidae, Blenniidae, Bothidae, Callionymidae, Carangidae, Gobiidae, Microdesmidae, Mullidae, Pomacentridae, Schindleriidae, and Tetraodontidae. The species that can complete their pelagic periods in coral-reef lagoons are a highly predictable group, and not simply a random selection of the potential species pool. Most of these species hatch from non-pelagic eggs. Water renewal times in the atoll lagoons, unlike the high-island barrier-reef lagoon, were much longer than expected pelagic larval durations of completer taxa. Demographically, lagoon populations of completer taxa apparently self-recruit and are probably near the closed end of the open/closed population continuum. The lagoonal bay on the high island differs from the other lagoons in containing larvae of species not found elsewhere, including some completers, and lacking some species that are abundant completers in other lagoons. In French Polynesia, lagoon size is a strong predictor of the number of lagoon completer taxa. The number of completer taxa apparently peaks at intermediate lagoon water-exchange times.     

Positive and negative selection towards tetracycline resistance genes in manure treatment lagoons

Aims: To evaluate the role of manure treatment lagoons of swine operations in the fate of faeces‐ and feed‐borne tetracycline‐resistant genes (TRG). Methods and Results: Samples of feed, faeces, lagoon liquid and lagoon sediment in farm’s vicinity were collected at three swine operations varied on their operational practices and analysed on the presence and frequencies of incidence of sixteen TRG in upstream sources (feed, faeces) and downstream receptacles (lagoon liquid and sediments). The highest frequency of TRG incidence was observed in a farm with extensive antibiotic usage and the lowest in the antibiotic‐free farm. The study revealed a decrease in TRG richness and diversity in the downstream habitats of each farm. The observed TRG diverged into two groups, the persistent genes that were detected both upstream and downstream, and the transient genes that were detected in the upstream habitats but became nondetectable in the lagoons. Quantitative PCR analysis revealed that upstream concentrations and abundances (determined as TRG/16S rRNA gene ratios) of transient and persistent TRG were similar; however, the former were attenuated in the lagoons to the levels below the detection limit, whereas the latter were ～ 100‐1000 fold amplified in their (mostly) liquid phases and were also detected in farms’ vicinities. Conclusion: Manure lagoons of swine operations imposed both positive and negative selection towards faeces‐ and feed‐borne TRG that, respectively, caused either their proliferation or attenuation in those environments. Significance and Impact of the Study: The study reveals that discharge of antibiotic resistance genes from swine farms to the environment is linked to their positive selection (defined as an impact leading to proliferation of those genes) in manure lagoons.     

Bacterial Population Dynamics in Dairy Waste during Aerobic and Anaerobic Treatment and Subsequent Storage

The objective of this study was to model a typical dairy waste stream, monitor the chemical and bacterial population dynamics that occur during aerobic or anaerobic treatment and subsequent storage in a simulated lagoon, and compare them to those of waste held without treatment in a simulated lagoon. Both aerobic and anaerobic treatment methods followed by storage effectively reduced the levels of total solids (59 to 68%), biological oxygen demand (85 to 90%), and sulfate (56 to 65%), as well as aerobic (83 to 95%), anaerobic (80 to 90%), and coliform (>99%) bacteria. However, only aerobic treatment reduced the levels of ammonia, and anaerobic treatment was more effective at reducing total sulfur and sulfate. The bacterial population structure of waste before and after treatment was monitored using 16S rRNA gene sequence libraries. Both treatments had unique effects on the bacterial population structure of waste. Aerobic treatment resulted in the greatest change in the type of bacteria present, with the levels of eight out of nine phyla being significantly altered. The most notable differences were the >16-fold increase in the phylum Proteobacteria and the approximately 8-fold decrease in the phylum Firmicutes. Anaerobic treatment resulted in fewer alterations, but significant decreases in the phyla Actinobacteria and Bacteroidetes, and increases in the phyla Planctomycetes, Spirochetes, and TM7 were observed.     

Discordance between genetic structure and morphological, ecological, and physiological adaptation in Lake Magadi tilapia

The Magadi tilapia (Alcolapia grahami, formerly Oreochromis alcalicus grahami) is a remarkable example of teleost life in an extreme environment. Typical conditions include water pH=10, titration alkalinity>300 mM, osmolality=525 mOsm, temperatures ranging from 23 degrees to 42 degrees C, and O(2) levels fluctuating diurnally between extreme hyperoxia and anoxia. A number of relatively small tilapia populations are present in various thermal spring lagoons around the margin of the lake separated by kilometers of solid trona crust (floating Na(2)CO(3)) underlain by anoxic water. Despite the apparent isolation of different populations, annual floods may provide opportunities for exchange of fish across the surface of the trona and subsequent gene flow. To assess the question of isolation among Lake Magadi populations, we analyzed the variable control region of the mitochondrial DNA (mtDNA) from six lagoons. A total of seven mtDNA haplotypes, including three common haplotypes, were observed in all six populations. Several of the Lake Magadi populations showed haplotype frequencies indicative of differentiation, while others showed very little. However, differentiation among lagoon populations was discordant with their geographical distribution along the shoreline. All populations exhibited the unusual trait of 100% ureotelism but specialized morphological and physiological characteristics were observed among several of the lagoon systems. In addition, distinct differences were observed in the osmolality among the lagoons with levels as high as 1,400-1,700 mOsm kg(-1), with corresponding differences in the natural levels of whole-body urea. These levels of osmotic pressure proved fatal to fish from less alkaline systems but remarkably were also fatal to the fish that inhabited lagoons with this water chemistry. Upon more detailed inspection, specific adaptations to differential conditions in the lagoon habitat were identified that allowed survival of these cichlids. Additional evidence against potential for gene flow among lagoons despite the sharing of common mtDNA haplotypes was that the osmolality of floodwaters following a heavy rain showed lethal levels exceeding 1,700 mOsm kg(-1). In isolation, different mtDNA haplotypes would be predicted to go to fixation in different populations due to rapid generation times and the small effective population sizes in a number of lagoons. We propose a model of balancing selection to maintain common mtDNA sequences through a common selection pressure among lagoons that is based on microhabitats utilized by the tilapia.     

Initial crop growth in soil collected from a closed animal waste lagoon

In the 21st century, remediation of the soil beneath animal waste lagoons will become an important issue, as they are closed due to environmental regulations or to abandonment. The possibility of growing crops in the soil, which has high concentrations of ammonium-N, has not been studied. The objective of this experiment was to determine if crop species would germinate and grow in lagoon soil. Soil was gathered from a lagoon that had received wastes from swine (Sus scrofa) and beef (Bos taurus) since 1968. Eight crops were grown in greenhouse pots containing the lagoon soil: winter barley (Hordeum vulgare L. 'Weskan'); field corn (Zea mays L., Cargill's hybrid 7997); 'Plainsman' winter rapeseed [Brassica napus L. spp. oleifera (Metzg.) Sinsk. f. biennis]; soybean [Glycine max (L.) Merr. 'KS 4694'); forage sorghum [Sorghum bicolor (L.) Moench 'Norkan']; sunflower (Helianthus annuus L. 'Hysun 354'); and winter wheat (Triticum aestivum L.)--two cultivars: '2137' and 'Turkey.' Plants were grown for 35 days in lagoon soil or an agricultural soil (Haynie very fine sandy loam; coarse-silty, mixed, superactive, calcareous, mesic Mollic Udifluvent) obtained from a field near the closed lagoon. Ammonium-N (average value of 692 mg/kg) was about 70-85 times greater than the average value of 8-10 mg/kg NH4-N in Kansan soils. The lagoon soil was nonsodic and had a salinity ranking of "medium" with an electrical conductivity averaging 2.29 dS/m. The high ammonium-N concentration in the lagoon soil was not inhibitory to emergence and growth. The eight crops grew taller in the lagoon soil than in the agricultural soil. Except for '2137' wheat, dry weight was higher in the lagoon soil than in the agricultural soil. The results showed that the lagoon soil is not detrimental to early growth of eight crops.     

Mediterranean Temporary Lagoon: Proposal for a definition of this endangered habitat to improve its conservation

Coastal lagoons have been recognised as a priority habitat for conservation and have benefited from several conservation plans. Under the Mediterranean climate, some of these lagoons might dry out during summer due to drought events. We propose the term Mediterranean Temporary Lagoons (MTLs) for these ephemeral water bodies and discuss their definition and characteristics. This term emerged in France among its coastal zone managers, who now commonly use it for conservation purposes. It is used in both natural systems as well as most artificial salt ponds in abandoned saltworks.In Europe, two directives have integrated lagoons as key targets to be preserved. Nonetheless, a certain discrepancy in the different definitions of lagoons has constrained joint actions. Indeed, while institutional definitions were originally derived from the scientific concept, their legislative and managerials meanings have been gradually modified and nowadays often differ from the original concept to create difficulties in the field. In addition, while it has been recommended to consider MTLs as a coastal lagoon habitat in the European Habitat Directive, its interpretation among EU member states is unsettled. Thus, clarifying lagoon habitats' terminology is required to ensure better management, monitoring and planning, and coordinate conservation actions.We discuss the inclusion of MTLs in habitat 1150 by confronting scientific and institutional literature and propose a new framework to better delimitate lagoon habitat around the Mediterranean basin, integrating MTLs. MTLs represent a specific habitat that hosts a pool of stenoecious macrophytes of conservation interest like Althenia filiformis, Riella helicophylla or Tolypella salina.     

Abundance of six tetracycline resistance genes in wastewater lagoons at cattle feedlots with different antibiotic use strategies

The abundance of six tetracycline resistance genes tet(O), tet(Q), tet(W), tet(M), tet(B) and tet(L), were quantified over time in wastewater lagoons at concentrated animal feeding operations (CAFO) to assess how feedlot operation affects resistance genes in downstream surface waters. Eight lagoons at five cattle feedlots in the Midwestern United States were monitored for 6 months. Resistance and 16S-rRNA gene abundances were quantified using real-time PCR, and physicochemical lagoon conditions, tetracycline levels, and other factors (e.g. feedlot size and weather conditions) were monitored over time. Lagoons were sorted according to antibiotic use practice at each site, and designated as 'no-use', 'mixed-use' or 'high-use' for comparison. High-use lagoons had significantly higher detected resistance gene levels (tet(R); 2.8 x 10(6) copies ml(-1)) relative to no-use lagoons (5.1 x 10(3) copies ml(-1); P < 0.01) and mixed-use lagoons (7.3 x 10(5) copies ml(-1); P = 0.076). Bivariate correlation analysis on pooled data (n = 54) confirmed that tet(R) level strongly correlated with feedlot area (r = 0.67, P < 0.01) and 'total' bacterial 16S-rRNA gene level in each lagoon (r = 0.51, P < 0.01), which are both characteristic of large CAFOs. tet(M) was the most commonly detected gene, both in absolute number and normalized to 16S-rRNA gene level, although tet(O), tet(Q) and tet(W) levels were also high in the mixed and high-use lagoons. Finally, resistance gene levels were highly seasonal with abundances being 10-100 times greater in the autumn versus the summer. Results show that antibiotic use strategy strongly affects both the abundance and seasonal distribution of resistance genes in associated lagoons, which has implications on water quality and feedlot management practices.     

Characterization of the waterbird communities wintering in Tunisian coastal lagoons

This article aims at studying wintering waterbirds in Tunisian coastal lagoons in order to support effective conservation measures. Species number and abundance of wintering waterbirds were assessed in January, each year from 2002 to 2007, in 10 lagoon sites belonging to four different lagoon systems. We counted 76 species and on average more than 120,000 birds per year, which represented more than 25% of the national population sizes. The most abundant taxonomic groups were waterfowls and waders, which also represented the highest species number. In general, the six most abundant bird species comprised collectively more than 77% of all birds counted. Considering all the studied lagoon systems collectively, for 13 species the lagoon systems should be considered as of international importance according the Ramsar Convention as they support regularly more than 1% of the populations. Only the lagoon system of the North held regularly more than 20,000 birds. The species abundances and species richness varied significantly among year and among lagoon systems. Based on our results we proposed priority conservation measures, these ecosystems being of major importance for wintering birds, at both national and international level.     

Hydrological characteristics of three North African coastal lagoons: insights from the MELMARINA project

Hydrological and hydrodynamic characteristics are important controls in all wetlands including coastal lagoons. Enhanced understanding of lagoon functioning can be obtained through the acquisition and interpretation of hydrological, meteorological and related data. The MELMARINA Project investigated links between hydrological and ecological conditions within North African coastal lagoons. It employed three primary sites: Merja Zerga in Morocco, Ghar El Melh in Tunisia and Lake Manzala in Egypt. Hydrological, meteorological and related data were acquired for these lagoons. Data included precipitation, evaporation, wind speed and direction, freshwater discharges into the lagoons, tides beyond the lagoons in the open sea, lagoon bathymetry and time series of lagoon water levels/depths. Data were acquired from secondary sources (including online archives) and targeted field survey and monitoring programmes. Interpretation of these data provides insights into the hydrological functioning of the lagoons and contributed to the modelling requirements of MELMARINA. The functioning of Merja Zerga is dominated by the exchange of water between the Atlantic and the lagoon. Large, tidally induced oscillations in water level are responsible for the inundation of extensive inter-tidal mudflats whilst the rapid replacement of water by exchanges with the sea diminishes the influence of freshwater inflows and winter rainfall. The smaller Mediterranean tides reduce the magnitude of lagoon–sea exchanges and result in much smaller water level oscillations within Ghar El Melh. As a result, this lagoon lacks the inter-tidal environments found within the Moroccan site and hydrodynamic conditions are more likely influenced by wind set up. Although freshwater inflows to Ghar El Melh are smaller than those in Merja Zerga, their effects, coupled with heavy winter rainfall, can persist due to longer residence times of water within the lagoon. Freshwater inflows are central to the functioning of Lake Manzala. Large discharges of relatively freshwater are provided by major drains which cross the Nile Delta. These influence lake water levels and are responsible for the freshwater conditions within large parts of the lake. The small tidal range of the eastern Mediterranean, coupled with constricted connections with the sea, reduces the influence of lake–sea exchanges and tidally induced water level oscillations within Lake Manzala. Guest editors: J. R. Thompson & R. J. Flower Hydro-ecological Monitoring and Modelling of North African Coastal Lagoons     

Human impacts and the status of water quality in the Bundala RAMSAR wetland lagoon system in Southern Sri Lanka

The brackish coastal wetlands in the Bundala National Park, the only RAMSAR site of southern Sri Lanka, are an important waterfowl habitat and economic zone. Bundala Lagoon, one of the three key lagoons of the Bundala wetlands, remains largely intact and relatively pristine, but the other two interconnected lagoons, namely, Embilikala and Malala, are impacted by drainage from 25.6 km² of upstream agricultural lands. Seasonal variations of water quality of the three lagoons and the key processes affecting water quality and quantity in these lagoons were studied during three agricultural seasons, to better understand the characteristics of the system. Bundala Lagoon, which was not affected by agriculture, recorded the highest ammonia and total nitrogen concentrations and the lowest phosphorus levels. Higher phosphorus levels in Embilikala Lagoon were related to the upstream agricultural activities with 65% of its total phosphorus measured being reactive phosphorous. Phosphorus additions occurred during the early months of the paddy cultivating seasons. Processes affecting the water quality of the Embilikala-Malala lagoon system included agricultural drainage, livestock additions, and breaching of the sand bar between Malala Lagoon and the sea. The salinity level of the Bundala Lagoon was higher than the others due to the connection to the sea, salt farms in the western part, and less dilution of salt from relatively low surface runoff and rainwater. All three lagoons reported pH levels conducive to most aquatic species. The primary production by phytoplankton in the lagoons of the Bundala wetland was phosphorus limited regarding their ratios of nitrogen to phosphorus. This study provides an overview of the present status of the lagoons of the wetland. Further work is needed to evaluate the impact of the external nutrient and water inputs on the flora and fauna of the lagoon environments. Suitable management practices to ensure the sustainability of the lagoon ecosystem can be derived through this increased understanding.     

Remediation of Ammonium-Contaminated Abandoned Animal Waste Lagoon Soil: Physical Properties and Growth of Barley

Remediation of the soil beneath closed animal waste lagoons is an important issue, particularly for lagoons in environmentally sensitive regions. Few studies address the possibility of using plants to remediate these soils. The objectives of this research were to determine whether barley (Hor-deum vulgare L.), a salt-tolerant crop, would grow in lagoon soil and to determine the effect of plant residue amendments on barley growth and soil physical properties. The lagoon soil was collected from a closed swine lagoon. Oat-straw and corn-cob residues were added at rates of 0 (control), 15, 30, 45, 60, and 75?g/kg lagoon soil. Barley grew in all soils, including the soil with no residues. Average grain yield of plants in pots with oat straw was more than twice that of plants in pots with corn cobs (10.7?g/pot and 4.5?g/pot, respectively). Bulk density and oxygen diffusion rate decreased with increasing amounts of residue in the soil. Infiltration was lower in pots with oat straw than in pots with corn cobs. Irrigation water moved rapidly through macropores visible in the soil with corn cobs. The soil amended with corn cobs retained less water, causing poor growth of the barley. The results showed that corn-cob residue created preferential flow paths in the lagoon soil.     

Fish community structure in lakeshore lagoons on long point,lake Erie,Canada

Synopsis The interaction of fluctuating water level and the Long Point topography is discussed with regard to the formation of lake-shore lagoons and their subsequent invasion by fishes. The species composition of fish communities in these lagoons was determined by 12 collections from lagoons (23 m² to 25 ha) which yielded 33 fish species. The relationship of the number of fish species to lagoon area was lognormal; that is, with increasing lagoon area the number of species rose rapidly at first but soon decreased sharply, probably limited by the number of species capable of surviving in the habitat. The marked effect of area on species number in small lagoons is considered in the context of a hypothetical seasonal pattern of occasional invasion and continuous extinction.A sequence of reproductive guilds was found. In beach lagoons psammophils and lithophils were dominant. In a large vegetated lagoon in the interior phytophils and speleophils were dominant. This sequence was paralleled by an increase in the proportion of guarding and nesting species in the communities. The sequence was disrupted in the small interior lagoons where adaptations for survival were more important than reproductive strategy.     

Recent evolution of fishery and land reclamation in Curonian and Lesina lagoons

The evolution of fishery and land reclamation in Lesina (Italy) and Curonian (Lithuania/Russia) lagoons was analysed as an example of recent trends in European coastal lagoons. Social and political changes were considered, addressing resource exploitation and inherent impacts on ecosystems. In both lagoons, the mismanagement of the fish stock led to the depletion of fish resources and to the decline of commercial fishery. In parallel, vast wetland fringes were reclaimed and turned into intensively managed farmland, with a marked loss of aquatic–terrestrial ecotones. In the last decades, the annual fish yield fell to less than 40 kg ha⁻¹ in the Lesina lagoon, where the fishermen dwindled to 40 units, mostly pensioners rounding off their income. Recently, in the Curonian lagoon, more than 100 small private fishing enterprises were licensed to fish. Overall, the landed catches were difficult to monitor, which resulted in a substantial uncontrolled landing of fish (up to 60% of the fish yield). Under these conditions, the sustainable exploitation of lagoons and their resources can be achieved through an integrated management of watershed and lagoons. The restoration of ecotones, marshes and floodplains and the preservation of semi-natural agricultural ecosystems have to be considered as priorities. Examples of such approach are provided by pilot programs, aiming at the commercial exploitation of the reed belts along the Curonian lagoon fringes. Reed harvesting would increase the acreage of important migration corridors and spawning habitats for fish, also providing an additional income to the local communities. Guest editors: A. Razinkovas, Z. R. Gasiūnaitė, J. M. Zaldivar and P. Viaroli European Lagoons and their Watersheds: Function and Biodiversity