Genetic analysis of incompatibility in the diploid Ipomoea species closely related to the sweet potato

Summary In order to identify the genotypic constitutions of incompatibility in the diploid species, Ipomoea leucantha Jacq. (K221), which is most closely related to the sweet potato, the progenies derived from the reciprocal crosses, backcrosses and testcrosses were analysed. All the plants examined were self-incompatible, and pollen germination was inhibited on the stigma after incompatible pollinations. No reciprocal differences were found in the incompatibility reactions. In the progenies three incompatibility groups were observed which showed the rather simple segregation ratios. The homozygous plants for incompatibility alleles were obtained in the progenies. The experimental results demonstrated a sporophytic type of incompatibility controlled by a single locus with multiple S-alleles exhibiting a dominance relationship in both the pollen and the stigma. The plants obtained in the progenies had the following genotypes: S ₁ S ₂, S ₁ S ₃, S ₂ S ₂, S ₂ S ₃ and S ₃ S ₃.     

Evolutionary reorganizations of ontogenesis in related frog species of the family Myobatrachidae

Literary data on the comparative embryology of Australian endemic frogs of the family Myobatrachidae have been considered. Six main types of development have been recognized, the important criteria for which are egg size, the site of embryo and tadpole development (in water or on land), the character of larval nutrition (exotrophic or endotrophic), the occurrence of direct development, brooding, etc. An attention has been also paid to the character of the early cleavage process in the embryos of various species. The peculiarities of ontogeny in Myobatrachidae are compared with those in representatives of other families in the order Anura. The perspectives of some further embryological studies of this Australian frog family have been out-lined.     

The relationship between anti-predator behaviour and aggression among conspecifics in the three-spined stickleback, Gasterosteus Aculeatus

The response of individual breeding three-spined sticklebacks to territorial intruders of various species was compared with their response to a predator outside the breeding season. The nature of the territorial response to the different intruders, as revealed by factor analysis, was very similar and the level of aggression shown to the different species co-varied across individuals and during each breeding cycle. The level of territorial aggression of the individual fish was positively correlated with their ‘boldness’ towards a predator. These results provide tentative support for the idea that anti-predator behaviour and aggression towards conspecifics are linked in this species. Supporting evidence for and possible adaptive significance of these results are discussed.     

Evolutionary reorganizations of ontogenesis in related species of coenobial volvocine algae

The evolutionary aspects of ontogenesis in green volvocine algae have been considered on the basis of the author's and published data, as well as the information on taxonomy, phylogeny, and ecology of this group. Analysis of the rate, diurnal rhythm, and light/dark control of cell divisions in various species, as well as experiments with the nucleic acid and protein synthesis inhibitors made it possible to elucidate cellular mechanisms underlying evolutionary rearrangements of asexual development in the genus Volvox.     

Evolutionary reorganizations of ontogenesis in related species of coenobial volvocine algae

The evolutionary aspects of ontogenesis in green volvocine algae have been considered on the basis of the author’s and published data, as well as the information on taxonomy, phylogeny, and ecology of this group. Analysis of the rate, diurnal rhythm, and light/dark control of cell divisions in various species, as well as experiments with the nucleic acid and protein synthesis inhibitors made it possible to elucidate cellular mechanisms underlying evolutionary rearrangements of asexual development in the genus Volvox.     

Comparison of the primary structure ofwaxy proteins (granule-bound starch synthase) between polyploid wheats and related diploid species

Thewaxy proteins encoded by the genomes A, B, and D in polyploid wheats and related diploid species were isolated by SDS-PAGE. The N-terminal amino acid sequences of mature proteins and V8 protease-induced fragments were determined. A total of five amino acid substitutions was detected in these sequences, which represent about 10% of the whole sequences of thewaxy proteins. A comparison of these sequences in polyploid wheats with those in related diploid species revealed the following: (i)waxy proteins encoded by the A genome of polyploid wheats were identical to that ofTriticum monococcum, (ii) thewaxy protein encoded by the B genome ofT. turgidum was identical to that ofT. searsii, but differed from those ofT. speltoides andT. longissimum by one amino acid substitution, (iii) thewaxy protein encoded by the B genome ofT. aestivum differed from that encoded by the B genome ofT. turgidum by one amino acid substitution, and (iv) thewaxy protein encoded by the D genome ofT. aestivum was identical to that ofT. tauschii.     

A study of chromosome association in hybrids between diploid species of Festuca

Hybrids between the two diploid species Festuca donax and F. drymeja had regular chromosome association, forming 7 bivalents at metaphase I. However, when the two species were crossed with a third species F. scariosa, the hybrids involving F. drymeja showed greater desynapsis than those with F. donax. When the F₁ hybrid F. donax × F. drymeja was crossed with F. scariosa, the trispecific progeny could be grouped into three classes according to the degree of desynapsis recorded. Abnormalities associated with the fusion of pollen mother cells, which produced highly polyploid cells, were also observed in the trispecific hybrids. Failure of chromosomal pairing and the occurrence of syncytes is attributed to genotypic interactions.     

Phylogeny and species delimitation of the C-genome diploid species in Oryza

The diploid Oryza species with C-genome type possesses abundant genes useful for rice improvement and provides parental donors of many tetraploid species with the C-genome (BBCC,CCDD).Despite extensive studies,the phylogenetic relationship among the C-genome species and the taxonomic status of some taxa remain controversial.In this study,we reconstructed the phylogeny of three diploid species with C-genome (Oryza officinalis,O.rhizomatis,and O.eichingeri) based on sequences of 68 nuclear single-copy genes.We obtained a fully resolved phylogenetic tree,clearly indicating the sister relationship of O.officinalis and O.rhizomatis,with O.eichingeri being the more divergent lineage.Incongruent phylogenies of the C-genome species found in previous studies might result from lineage sorting,introgression/hybridization and limited number of genetic markers used.We further applied a recently developed Bayesian species delimitation method to investigate the species status of the Sri Lankan and African O.eichingeri.Analyses of two datasets (68 genes with a single sample,and 10 genes with multiple samples) support the distinct species status of the Sri Lankan and African O.eichingeri.In addition,we evaluated the impact of the number of sampled individuals and loci on species delimitation.Our simulation suggests that sampling multiple individuals is critically important for species delimitation,particularly for closely related species.     

New Hypoxylon species and notes on some names associated with or related to Hypoxylon

These new species of Hypoxylon are described: H. elevatidiscus, H. squamulosum, H. subalbum and H. vinosopulvinatum. A referenced list of all Hypoxylon species known to us described since 1996 is given and a key presented. Names associated with Hypoxylon that were not given in the Ju and Rogers monograph are annotated and diagnostic corrections of taxa discussed in that monograph are given.     

Single-tissue and cross-tissue heritability of gene expression via identity-by-descent in related or unrelated individuals

Family studies of individual tissues have shown that gene expression traits are genetically heritable. Here, we investigate cis and trans components of heritability both within and across tissues by applying variance-components methods to 722 Icelanders from family cohorts, using identity-by-descent (IBD) estimates from long-range phased genome-wide SNP data and gene expression measurements for approximately 19,000 genes in blood and adipose tissue. We estimate the proportion of gene expression heritability attributable to cis regulation as 37% in blood and 24% in adipose tissue. Our results indicate that the correlation in gene expression measurements across these tissues is primarily due to heritability at cis loci, whereas there is little sharing of trans regulation across tissues. One implication of this finding is that heritability in tissues composed of heterogeneous cell types is expected to be more dominated by cis regulation than in tissues composed of more homogeneous cell types, consistent with our blood versus adipose results as well as results of previous studies in lymphoblastoid cell lines. Finally, we obtained similar estimates of the cis components of heritability using IBD between unrelated individuals, indicating that transgenerational epigenetic inheritance does not contribute substantially to the "missing heritability" of gene expression in these tissue types.     

Survival of diploid yeast cells to Bleomycin in combination with UV-light or hyperthermia

Summary In the present work we have investigated the possible interaction between Bleomycin (B) and UV light or hyperthermia (HT) in the induction of lethal events in diploid yeast populations in the stationary phase of growth. UV and B acting as single agents determine sigmoid survival curves. The combination of UV + B produces different degrees of sensitization depending on dose ranges. For [B] = 7.5 µg/ml combined with different UV fluences an exponential course is observed, suggesting overlapping lesion specificity of the involved repair pathways (excision and recombination). The hyperthermia plus Bleomycin treatment produces different degrees of inactivation depending on the sequences. Maximal inactivation effect was obtained for the sequence B + HT. In the case of HT + B ([B] > 7.5 µg/ml) the obtained sensitization is lower.     

Retrotransposon mdg3 is transferred between somatic cells of unrelated species in coculture

Since retrovirus-like particles of gypsy (mdg4) are capable of interspecific transfer, other Drosophila melanogaster gypsy-related retrotransposons were tested for this property. As a donor and a recipient, D. melanogaster and D. virilis cultured cells were used. Recipient cell DNA was analyzed with probes directed to mdg1, mdg3, 17.6, 297, 412, or B104/roo. Transfer was demonstrated for mdg3, which lacks env. The possible mechanism of transfer is discussed.     

Analysis of nrDNA polymorphism in closely related diploid sexual, tetraploid sexual and polyploid agamospermous species

Nuclear sequences of ITS1-5.8S-ITS2 region of rDNA may be an important source of phylogenetically informative data provided that nrDNA is cloned and the character of sequence variation of clones is properly analyzed. nrDNA of selected Taraxacum sections was studied to show sequence variation differences among diploid sexual, tetraploid sexual and polyploid agamospermous species. We examined nucleotide characteristics, substitution pattern, secondary structure, and the phylogenetic utility of ITS1-5.8S-ITS2 from 301 clones of 32 species representing 11 sections. The most divergent sequences of ITS1&2 differed by 17.1% and in 5.8S only by 3.7%. The ITS1-5.8S-ITS2 characteristics, integrity and also stability of secondary structures confirmed that pseudogenes are not responsible for the above variation. The within-individual polymorphism of clones implies that the concerted evolution of ITS cistron of agamospermous polyploid Taraxacum is remarkably suppressed. Sequences of ITS clones proved to be a useful tool for mapping pathways of complex reticulation (polyploid hybridity) in agamospermous Taraxacum.