Occurrence and function of yeasts in Asian indigenous fermented foods

In the Asian region, indigenous fermented foods are important in daily life. In many of these foods, yeasts are predominant and functional during the fermentation. The diversity of foods in which yeasts predominate ranges from leavened bread-like products such as nan and idli, to alcoholic beverages such as rice and palm wines, and condiments such as papads and soy sauce. Although several products are obtained by natural fermentation, the use of traditional starter cultures is widespread. This minireview focuses on the diversity and functionality of yeasts in these products, and on opportunities for research and development.     

Ontogenic variations in the content and distribution of progesterone receptor isoforms in the reproductive tract and brain of chicks

Progesterone participates in the regulation of several functions in chicks such as ovulation, gonadal differentiation, and sexual and nesting behaviors. Many progesterone actions are mediated by specific intracellular receptors (PR) which are ligand-induced transactivators. Two PR isoforms that are functionally distinct in their ability to activate genes and regulate distinct physiological processes have been described in chicks: a full length form PR-B and the N-terminally truncated one PR-A which lacks the amino-terminal 128 amino acids of PR-B. PR isoforms have been detected in several tissues of both the adult and the embryo chick such as brain, ovary and oviduct. PR isoforms expression ratio varies among progesterone target tissues and under different hormonal and environmental conditions such as those presented during avian sexual maturity and the seasons of the year. These data let us to conclude that progesterone actions in brain, ovary, and oviduct highly depend on PR isoforms expression pattern and regulation.     

水鳖科植物花和花序的形态学及发育的基本式样

通过野外调查 ,结合实体解剖和扫描电镜观察 ,对国产水鳖科植物花和花序的分化式样及花部结构多样性进行了研究 ,并探讨了水鳖科植物的花部发育的基本式样 ,结果表明 ,在花部是三基数的植物中 ,如水筛属 (Blyxa)、水车前属 (Ottelia)等 ,花器官原基以轮状 ,向心发育 ,辐射对称的方式发生 ,后一轮倾向于与前一轮相交替 ;在花部非三基数的植物中 ,如虾子草属 (Nechamandra) ,苦草属 (Vallisneria)等 ,由于部分花器官缺失 ,花器官原基呈不规则发生。     

Applications of biotechnology and genomics in goats

Goat breeding has many advantages, including economic (low cost); sociological (products made from skin and other elements), and ecological (goat adaptability). Products such as goat kid meat (cabrito), which is considered a delicacy, and goat milk cheese are some of the most appreciated. Many high priced products such as purses, shoes, jackets, and other articles are made from the fur and skin of goats. Presently, by applying new biotechnology research to the goat industry, their productivity, molecular diagnosis, health, and genetic diversity can be improved. Surely there are many more opportunities to come for modern biotechnology. Discussing these with audiences, such as those attending specialized international conferences on goat production, are of great importance because there is a lack of knowledge among goat breeders and resistance for carrying out this type of research. Events of this type should be of great use for instructing attendants, publicizing the usefulness of goat production, and creating steps towards discovering available benefits and promises of modern biotechnology.     

放线菌中亮氨酸应答调控蛋白的生物学功能及其调控机理

放线菌是一类革兰氏阳性细菌,可产生氨基酸等初级代谢产物和抗生素等次级代谢产物,其广泛用于食品、医药、添加剂及化妆品行业。此外,还有少数放线菌,如分枝杆菌等,是可以引起人和动植物病害的病原菌。亮氨酸应答调控蛋白(Leucine-responsive regulatory protein,Lrp)是一类在氨基酸代谢及其相关代谢过程中的重要转录调控子,能够应答各种氨基酸,参与调控微生物细胞的多个生理过程,例如氨基酸代谢和转运、中心代谢、细菌的持久性和毒力等。本文总结了放线菌Lrp的生物学功能,并综述了放线菌中不同种属Lrp以及天蓝色链霉菌和红色糖多孢菌Lrp调控机理的研究进展。     

miRNA及其靶位点多态性的研究进展

微RNA(microRNA,miRNA)是一类进化上保守、长度为21～23nt的非编码单链小RNA,参与个体发育、器官形成、细胞增殖、分化和细胞凋亡等生物学过程,并在其中发挥重要的调节作用。近年来研究发现,miRNA及其靶位点的多态将引起不同类型的疾患。文章主要从miRNA及其靶位点的多态类型,以及由多态性引起的相关疾病等方面来阐述miRNA的最新进展。     

海鞘再生的细胞学过程及其调控机制研究进展与展望

再生现象在后生动物中普遍存在,但不同物种的再生能力存在显著差别.无脊椎动物如水螅和涡虫等再生能力较强,具有部分组织或细胞即可再生出一个完整个体的能力,被称为整体再生;而脊椎动物的再生能力相对较弱,局限在某些特定器官或身体结构,被称为部分再生,如蝾螈的附肢.海鞘作为进化上介于无脊椎动物与脊椎动物之间的尾索动物,既包括具备...     

Patterns and properties of polarized light in air and water

Natural sources of light are at best weakly polarized, but polarization of light is common in natural scenes in the atmosphere, on the surface of the Earth, and underwater. We review the current state of knowledge concerning how polarization and polarization patterns are formed in nature, emphasizing linearly polarized light. Scattering of sunlight or moonlight in the sky often forms a strongly polarized, stable and predictable pattern used by many animals for orientation and navigation throughout the day, at twilight, and on moonlit nights. By contrast, polarization of light in water, while visible in most directions of view, is generally much weaker. In air, the surfaces of natural objects often reflect partially polarized light, but such reflections are rarer underwater, and multiple-path scattering degrades such polarization within metres. Because polarization in both air and water is produced by scattering, visibility through such media can be enhanced using straightforward polarization-based methods of image recovery, and some living visual systems may use similar methods to improve vision in haze or underwater. Although circularly polarized light is rare in nature, it is produced by the surfaces of some animals, where it may be used in specialized systems of communication.     

Line-of-descent and genealogical processes,and their applications in population genetics models

A variety of results for genealogical and line-of-descent processes that arise in connection with the theory of some classical selectively neutral population genetics models are reviewed. While some new results and derivations are included, the principle aim is to demonstrate the central importance and simplicity of genealogical Markov chains in this theory. Considerable attention is given to “diffusion time scale” approximations of such genealogical processes. A wide variety of results pertinent to (diffusion approximations of) the classical multiallele single-locus Wright-Fisher model and its relatives are simplified and unified by this approach. Other examples where such genealogical processes play an explicit role, such as the infinite sites and infinite alleles models, are discussed.     

Functional aspects of polyisoprenoid protein substituents: roles in protein-protein interaction and trafficking

There are now numerous examples of post-translational modification with geranylgeranyl or farnesyl substituents. Once thought of as solely a mechanism for association of proteins with membranes, other functional aspects of protein prenylation have come to be appreciated. Although, in almost all instances, such proteins are membrane associated, they are often found to also engage in protein-protein interactions. In some instances, such interactions are critical aspects of prenylated protein trafficking. In this review, the role of prenylation in mediating protein-protein interactions will be considered. The hypothesis will be developed that such interactions occur through recognition of the prenyl group and a second domain, on the prenylated protein, by a heterodimeric protein partner.     

小麦赤霉病镰孢菌毒素的生物合成及其分子调控

禾谷镰刀菌是小麦赤霉病的主要致病菌,其真菌次生代谢产生的单端孢霉烯类B型毒素,如雪腐镰刀菌烯醇(nivalenol,NIV)、脱氧雪腐镰刀菌烯醇(deoxynivalenol,DON)和其它乙酰化衍生物等污染小麦籽粒后对人畜健康构成威胁。综述了近年来国内外对小麦赤霉病镰孢菌单端孢霉烯类B型毒素生物合成的主要途径及分子调控研究进展,对毒素合成过程中的重要调控基因如TRI5、TRI7和TRI13在农业中的应用进行了阐述。     

苔藓植物的化学元素含量及其特点

苔藓植物是化学元素最有效的积累者,在指示环境质量变化方面有其独到之处。本文阐述了苔藓植物体内地球化学元素的组成、含量、来源及其特点,用以揭示影响苔藓植物地球化学元素的因素,从而为苔藓植物作为指示生物提供更可靠的理论依据。苔藓植物体内所含的元素种类很多,主要来自大气沉降(如降水、降尘、扬尘、树冠淋溶等)和生长基质(如土壤、岩石等),元素含量受到区域空间、生态系统、苔藓种类以及时间季节的影响。苔藓植物体内地球化学元素含量可以指示环境条件(如区域空间、生态系统和时间)的差异。     

Staphylococci in colonization and disease: prospective targets for drugs and vaccines

Pathogenic staphylococci are now regarded in the scientific community as antibiotic resistant 'superbugs' because they have an amazing capacity to acquire resistance traits. Surprisingly, antibiotic development has decelerated. Promising targets for drug development are enzymes involved in the biosynthesis of cell envelope structures such as peptidoglycan, teichoic acids, membrane lipids, or cell wall associated adhesins. Compounds that inactivate or neutralize the most aggressive toxins such as the superantigens and the pore forming toxins have also been considered. In the past decade, global regulatory systems have been studied that contribute to virulence and might be candidates for target development. Targets that are particularly promising include all enzymatic reactions that are unique to bacteria and that are involved in central metabolism, such as methionine-tRNA(fMet) formyltransferase or the peptide deformylase, which have been successfully used for designing new inhibitors. There are also several known antibiotics that have roused new interest especially if they are active against multi-resistant staphylococci. Various cell wall components are promising candidates for active and passive immunization strategies such as capsule, slime, teichoic acids or cell wall bound adhesins. Several new targets for drugs or vaccines will arise from the functional analysis of the staphylococcal genomes that contain many hitherto unknown targets.     

Decomposition and nitrogen mineralization in natural and agroecosystems: the contribution of soil animals

The present article centres on the contribution of soil animals to organic. matter decomposition and nitrogen mineralization in natural and agro-ecosystems. Criteria are presented for the categorisation of the soil fauna in functional groups in order to be able to quantify the contribution of the soil fauna. Three types of classifications: size, habitat and food, are discussed. For various natural ecosystems, such as prairies and forests, and for agro-ecosystems a rather similar outcome of the faunal contribution to nitrogen mobilization of approximately 30% appears to exist. This value is dependent on various types of interactions among functional groups, changes in population density of microorganisms and soil fauna, seasonally changing abiotic factors and management, such as fertilization, harvesting and addition of harvest residues to the soil. Finally, to improve management of ecosystems as related to soil faunal activity in decomposition, lines are set out for further research such as the development of dynamic models, studies concerning the effects of perturbation in relation to microbial dominance and the integration of the study of below-ground food webs with ecological theories.     

Restoration of Natural and Semi-Natural Wetland Systems in Central Europe: Progress and Predictability of Developments

After almost 40 years of experience in wetland restoration in Central Europe in which vegetation changes have been monitored by means of permanent plots or vegetation maps, some light can be shed on the intrinsic dynamics of such ecosystems, showing the limits of restoration and constraints in its manipulation. Sometimes such constraints in the restoration process can be identified, mostly being constraints in nutrient availability or in the water regime, but unexpected changes can also be the result of intrinsic species fluctuations or invasive species. Unexpected vegetation developments are sometimes undesired, can be very persistent and may indicate that environmental conditions are not suitable for target communities. Unexpected developments also illustrate the limits in restoration ecology. Very often the restoration process simply proceeds along successional pathways we did not anticipate. Theories about such alternative pathways can be explored using prediction models, such as cellular automata, which can handle the results of biomonitoring very efficiently. Biomonitoring during 40 years, however, has also shown that a certain amount of unpredictability has to be taken for granted, both in natural wetlands and in areas under restoration.     

Overexpression and purification of halophilic proteins in Haloferax volcanii

Halophilic enzymes function optimally at high salt concentrations and are active at low water availability. Such conditions are encountered at elevated concentrations of solutes such as salts and sugars, and at high concentrations of organic solvents. However, expression in heterologous hosts such as Escherichia coli can cause problems, since halophilic proteins typically misfold and aggregate in conditions of low ionic strength. We have harnessed the sophisticated genetic tools available for the haloarchaeon Haloferax volcanii, to develop a system for the overexpression and purification of halophilic proteins under native conditions.     

Caspase-containing complexes in the regulation of cell death and inflammation

Caspases are a family of cysteine proteases that are essential in the initiation and execution of apoptosis and the proteolytic maturation of inflammatory cytokines such as IL-1beta and IL-18. Caspases can be subdivided into those that have a large prodomain and those that have not. In general, apoptotic and inflammatory signalling pathways are initiated when large-prodomain caspases are recruited to large protein complexes via homotypic interactions involving death domain folds. The formation of these specialised multimeric platforms involves three major functions: (1) the sensing of cellular stress, damage, infection or inflammation; (2) multimerisation of the platform; and (3) recruitment and conformational activation of caspases. In this overview we discuss the complexes implicated in the regulation of cell death and inflammatory processes such as the death-inducing signalling complex (DISC), the apoptosome, the inflammasomes and the PIDDosome. We describe their sensing functions, compositions and functional outcomes. Inhibitory protein families such as FLIPs and CARD-only proteins prevent the recruitment of caspases in these sensing complexes, avoiding inappropriate initiation of cell death or inflammation.