狗肝脏苯甲二氮Zhuo结合抑制因子的cDNA克隆及序列分析

在研究狗抗吗啡活性肽ＰＰＣ过程中,发现它与牛的ＤＢＩ的氨基酸序列有很高的同源性,但尚未见到有关狗的ＤＢＩ的文献报道,为了更好的探讨ＰＰＣ和ＤＢＩ相互间的关系,对狗的ＤＢＩ的ｃＤＮＡ进行了克隆和序列分析。本研究利用大鼠ＤＢＩ的基因片段为探针,从狗肝脏ｃＤＮＡ文库中,筛选得到了一个阳性克隆,并进行了全自动和手工测序,得到了ＤＢＩ的全长基因。根据ＥＢＭＬ ｂａｎｋ序列检索,发现狗的ＤＢＩ核酸序列与牛的同     

鸡传染性法氏囊病病毒内蒙古毒株VP2基因的克隆和序列分析

以鸡传染性法氏囊病病毒内蒙古毒株（ＩＢＤＶ-ＮＭ）ｄｓＲＮＡ为模板,用ＲＴ-ＰＣＲ法扩增其主要寄主保护抗原ＶＰ２基因的全长ｃＤＮＡ,克隆于ｐＵＣ１９的ＸｂａＩ／ＫｐｎＩ位点,进行了全序列分析。序列比较发现ＩＢＤＶ-ＮＭ毒株ＶＰ２基因与已报道的其它７个ＩＢＤＶＣＪ８０１ｂｋｆ、Ｃｕ１、ＰＢＧ９８、５２／７０、００２—７３、ＳＴＣ及ＶａｒｉａｎｔＥ毒株之间高度同源,其核苷酸序列的同源率为９１.６％～９６．２％,推测的氨基酸序列的同源率为９６.２％～９８．６％。ＩＢＤＶ-ＮＭ毒株ＶＰ２高变异区的第一个亲水区氨基酸序列与ＣＪ８０１ｂｋｆ、Ｃｕ１、ＰＢＧ９８、５２／７０、ＳＴＣ、００２—７３比较,有一个氨基酸差异,第二个亲水区氨基酸序列与上述６个毒株完全相同。而与ＶａｒｉａｎｔＥ比较,两个亲水区内各有两个氨基酸差异。此外,ＩＢＤＶ-ＮＭ毒株ＶＰ２具有强毒株所特有的７肽保守区：ＳＷＳＡＳＧＳ。这些结果表明,ＩＢＤＶ-ＮＭ毒株为标准血清Ⅰ型ＩＢＤＶ强毒株。     

黄瓜花叶病毒山东株（CMV—SD）RNA2全和cDNA克隆的构建及全序列分析

分别利用５’ＲＡＣＥ和３’ＲＡＣＥ确定了ＣＭＶ－ＳＤＲＮＡ２的５’和３’未端序列,在此基础上,利用ＲＴ－ＰＣＲ得到了ＲＮＡ２的５’端一半的ｃＤＮＡＤＱ ＢＴＧ Ｐｃ２５和３’端一半的ｃＤＮＡ克隆ＰＣ２３,并通过拼接构建了ＲＮＡ２全长ｃＤＮＡ克隆ＰＣ２Ｆ。     

黄瓜花叶病毒山东株(CMV-SD)RNA2全长cDNA克隆的构建及全序列分析

分别利用５’ＲＡＣＥ和３’ＲＡＣＥ确定了ＣＭＶＳＤＲＮＡ２的５’和３’末端序列,在此基础上,利用ＲＴＰＣＲ得到了ＲＮＡ２的５’端一半的ｃＤＮＡ克隆ｐＣ２５和３’端一半的ｃＤＮＡ克隆ｐＣ２３,并通过拼接构建了ＲＮＡ２全长ｃＤＮＡ克隆ｐＣ２Ｆ。通过对ｐＣ２５和ｐＣ２３进行序列测定,得到了ＲＮＡ２的全序列。序列分析结果表明ＣＭＶＳＤＲＮＡ２由３０４８ｎｔ组成,其中存在２个部分重叠的阅读框ＯＲＦ１（７９～２６５２ｎｔ）和ＯＲＦ２（２４１４～２７４６ｎｔ）,分别编码８５８ａａ的２ａ蛋白和１１１ａａ的２ｂ蛋白,并在２ａ蛋白的序列中发现了动植物病毒复制酶所特有的两个保守序列。该株系ＲＮＡ２核苷酸序列与分属ＣＭＶＩ亚组的Ｆｎｙ株系和ＩＩ亚组的Ｑ株系ＲＮＡ２的核苷酸序列同源性分别为９１７％和７５６％;２ａ蛋白的氨基酸序列同源性分别为９３８％和６７７％,２ｂ蛋白的氨基酸序列同源性分别为８３０％和５１３％。同源性比较的结果表明ＳＤ株系属于ＣＭＶＩ亚组。     

香蕉束顶病毒基因克隆和序列分析

对香蕉束顶病毒（ＢＢＴＶ）中国分离株ＤＮＡ组份Ｉ（ＤＮＡ－１）、外壳蛋白（ＣＰ）和运转蛋白（ＭＰ）基因进行了克隆和序列分析。ＢＢＴＶＤＮＡ－１含有１１０３个核苷酸,与南太平洋和亚洲分离株分别有８７％－８８％ ９６．９－９８％的核苷酸序列同源性。由ＤＮＡ－１编码的复制酶含有１８６个在酸残基。与南太平洋和亚洲分离株分别有８４．４％－９５．８％和９７．６％、９８．０％的氨基酸序列同源性。外壳蛋白基因由５     

鸡传染性支气管炎病毒中国流行株免疫原S1基因的分子克隆,序？…

对来源于我国华东地区的鸡传染性支气管炎病毒流行株ＱＤ免疫原Ｓ１基因ｃＤＮＡ进行了克隆,序列分析了和ＤＮＡ免疫的初步研究,ＲＴ－ＰＣＲ扩增ＱＤ毒株的Ｓ１基因,将其５′和３′端分别进行了分子修饰后插入克隆载体ＰＵＣ１８的ＢａｍＨＩ／ＨｉｎｄⅢ位点,大肠杆菌中实现了目的基因的克隆,利用英国ＩＢＶ毒株Ｓ１全基因核酸探针与ＱＤ毒株Ｓ１基因的重组克隆质粒子分杂交后,采用ＨａｅⅢ,ＰｖｕⅡ和ＸｂａＩ等限制酶对此     

中国河南株丁型肝炎病毒全基因组的cDNA克隆和序列分析

从我国河南－抗丁型肝炎病毒抗原（ａｎｔｉ－ＨＤＡｇ）及丁型肝炎病毒（ＨＤｖ）ＲＮＡ双阳性的ＨＢｓＡｇ携带者血清中提取ＲＮＡ,采用人工合成的引物进行逆转录和聚合酶链反应（ＰＣＲ）,获得了贯穿ＨＤＶ全基因组的６个相互重叠的ｃＤＮＡ片段。经双脱氧末端终止法进行核苷酸序列分析,得到了长度为１６７４ｂｐ的我国人河南株ＨＤＶｃＤＮＡ全序列。计算机分析表明,该株与我国台湾株（ＨＤＶＩＡ型）、美国－１株（ＨＤＶＩＢ型）、日本－１株（ＨＤＶⅡ型）和秘鲁－１株（ＨＤＶⅢ型）的核苷酸同源性分别为的９４．３％、８６．８％、７５．４％和６６．３％,氨基酸序列的同源性分别为８９．７％、８５．１％、７１．９％和６４．６％,并在核苷酸和推导的ＨＤＡｇ氨基酸序列中分别发现了５个和２个集中保守的区域。这些区域均与ＨＤＶ的某些重要功能密切相关。     

传染性法氏囊病病毒CJ－801bkf毒株VP2 cDNA基因结构的分析

以传染性法氏囊病病毒（ＩＢＤＮ）中国毒株ＣＪ－８０１ｂｋｆ的基因组Ａ片段ｄｓＲＭＡ为模板,经反向转录和ＰＣＲ扩增,克隆了保护性抗原ＶＰ２ｃＤＮＡ基因。经Ｓａｎｇｅｒ法测序,确定了ＶＰ２ｃＤＮＡ基因有１４８４个核苷酸,推测了ＶＰ２氨基酸的顺序,与已报导的６株ＩＢＤＶ毒株ＣｕＩ、ＰＢＧ９８、５２／７０、００２－７３、ＳＴＣ和ＶａｒｉａｎｔＥ的ＶＰ２区做了比较,证明：克隆的ＣＪ－８０１ｂｋｆＶＰ２ｃＤＮＡ基因是全长的,含有正确的起始密码子ＡＴＧ;ＣＪ－８０１ｂｋｆ与毒株Ｃｕｌ和ｐＢＧ９８同源性最高;ＣＪ－８０１ｂｋｆＶＰ２高可变区内两个亲水区的氨基酸顺序与ＣｕＩ、ＰＢＧ９８、５２／７０、００２－７３和ＳＴＣ完全相同;７肽区内第三个丝氨酸残基则变异为精氨酸。这些结果提示,中国ＣＪ－８０１ｂｋｆ毒株应属标准血清Ｉ型ＩＢＤＶ弱毒株。     

猪瘟病毒糖蛋白E0基因的克隆及其表达研究*

用ＲＴ－ＰＣＲＡ法扩增分别获得了中国猪瘟病毒强毒石门株和免化弱毒株糖蛋白Ｅ０基因ｃＤＮＡ,并克隆到ｐＧＥＭ Ｔ载体中测定其核着酸序列和推导出其对应氨基酸序列;结果表明这两个毒株间的Ｅ０基因核着酸序列同源性为９５．３％,氨基酸序列同源性为９４％,有１４个残基的差异;与几个代表毒株ＡＬＤ株、ＧＰＥ株、Ｂｒｅｓｃｉａ株、Ａｌｆｏｒｔ株和国外测得的免化弱毒Ｃ株相应序列进行比较,所测石门病毒核苷酸序列与上述各株对应序列的同源性分别为９８．０％、９７．１％、９２．７％、８６．８％和９５．４％;氨基酸序列同源性分别为９     

稻胚凝集素基因的克隆,序列分析及表达

以水稻基因组ＤＮＡ为模板,以特异引物经聚合酶链式反应方法扩增出稻胚凝集素基因并克隆到Ｅ．ｃｏｌｉ质粒ｐＢｌｕｅｓｃｒｉｐｔＳＫ（＋）的ＳｍａⅠ位点。序列分析表明,克隆到的基因片段大小为７８１ｂｐ,没有内含子,编码１条长２２７个氨基酸、分子量约２３ｋＤ的肽链,其中Ｎ－端２８个氨基酸是信号肽。与报道的稻胚凝集素ｃＤＮＡ序列进行顺序同源性比较,发现它们之间有很高的同源性（９９．７４％）,其编码区第１６７     

猪脑苯甲二氮结合性抑制物的分离纯化及其镇痛活性

纯化猪脑苯甲二氮结合性抑制物 (DBI)并研究它在镇痛方面的生物学功能 .猪脑提取液经SephadexG 5 0分子筛层析、SP SepharoseFastFlow阳离子交换柱层析、SourceTM30SFPLC和RP HPLC分离得到DBI ,纯度达 93 5 % .经测定其相对分子质量 (Mr)为 980 8.3,pI为 7 2 .氨基酸组成及其序列检测结果表明 ,该蛋白由 86个氨基酸组成 ,与猪肠DBI的序列相同 ,而且N端都是乙酰化封闭的 .镇痛活性实验在SD雄性大鼠上进行 ,测量其对伤害性热和机械刺激反应的潜伏期作为指标 .将DBI注射到大鼠的侧脑室和脊髓蛛网膜下腔内 ,都产生明确的镇痛作用 ,在吗啡耐受的大鼠侧脑室注射DBI仍有镇痛作用 .无论在脊髓或脑水平 ,DBI对吗啡的抗伤害作用均无明显影响 .结果提示 ,中枢神经系统内 ,DBI在一定剂量内有明确的镇痛作用 ,对吗啡耐受的大鼠DBI仍有镇痛作用     

Nucleotide sequence encoding the precursor of the small subunit of ribulose 1,5-bisphosphate carboxylase from Lemna gibba L.G-3

We have sequenced a cDNA clone, pLgSSU, which encodes the small subunit of ribulose 1,5-bisphosphate carboxylase of Lemna gibba L.G-3 a monocot plant. This clone contains a 832 basepair insert which encodes the entire 120 amino acids of the mature small subunit polypeptide (Mr = 14,127). In addition this clone encodes 53 amino acids of the amino terminal transit peptide of the precursor polypeptide and 242 nucleotides of the 3' non-coding region. Comparison of the nucleotide sequence of pLgSSU with Lemna gibba genomic sequences homologous to the 5' end of the cDNA clone suggests that nucleotides encoding four amino-terminal amino acids of the transit peptide are not included in the cDNA clone. The deduced amino acid sequence of the Lemna gibba mature small subunit polypeptide shows 70-75% homology to the reported sequences of other species. The transit peptide amino acid sequence shows less homology to other species. There is 50% homology to the reported soybean sequence and only 25% homology to the transit sequence of another monocot, wheat.     

Gene expression and cDNA cloning identified a major basic protein constituent of bovine seminal plasma as bovine monocyte-chemoattractant protein-1 (MCP-1).

P6 is one of the major basic proteins of bovine seminal plasma. Using cell-free translation of poly(A)+RNA from bovine seminal vesicle tissue and monospecific anti-P6-IgGs, we show that P6 is a secretory product of the seminal vesicles. Immunohistochemical experiments supported this finding. Immunoscreening of a lambda gt11 cDNA library derived from seminal vesicle poly(A)+RNA furnished a number of positive cDNA clones, from which clone pH42 was characterized by sequencing. The partial amino acid sequence of a CNBr-fragment of P6 permitted identification of the reading frame of clone pH42 encoding the precursor protein of P6. The P6 precursor contains a signal peptide of 23 amino acids followed by the mature P6 sequence of 76 amino acid residues. The cDNA sequence of pH42 was 80% homologous with that of the human monocyte-chemoattractant protein-1 (hMCP-1). The respective amino acid sequences for the precursor molecules are 72% identical. Northern analysis of seminal vesicle poly(A)+RNA using pH42 as probe probe identified a 0.9-kb P6 mRNA. Stimulation of P6 mRNA expression by phytohemagglutinin in bovine peripheral mononuclear leukocytes suggests that P6 is identical to bovine MCP-1.     

The primary structure of human dopamine-beta-hydroxylase: insights into the relationship between the soluble and the membrane-bound forms of the enzyme.

A full length dopamine-beta-hydroxylase (DBH) cDNA clone was isolated from a human pheochromocytoma lambda gt11 library. Both structural and functional evidence confirms the authenticity of the clone: (i) antibodies selected with fusion proteins generated by positive clones precipitate DBH activity, (ii) the sequence of three internal DBH tryptic peptides are included in the deduced DBH sequence, (iii) the previously reported N-terminal 15 amino acids of bovine DBH exhibits a nearly complete identity with that predicted for human DBH. The polypeptide chain of DBH comprises 578 amino acids corresponding to an unmodified protein of 64 862 daltons and is preceded by a cleaved signal peptide of 25 residues. DBH exists in both membrane-bound and soluble forms. The hydropathy plot reveals no obvious hydrophobic segment, except the signal peptide. S1 mapping analysis indicates no diversity in the 5' and 3' extremities of the DBH mRNA. Taken together with available biochemical data, these observations suggest that the membrane attachment of DBH probably results from a post-translational modification, glypiation being the most likely candidate. Comparative amino acid sequence analysis establishes that DBH shares no homology with the other catecholamine synthesizing enzymes, tyrosine hydroxylase and phenylethanolamine-N-methyl transferase.     

Identification of a cDNA clone for the beta-subunit of the pyruvate dehydrogenase component of human pyruvate dehydrogenase complex

We report the isolation of a 1.5 kb cDNA clone for the beta subunit of human pyruvate dehydrogenase (E1) from a human liver lambda gt11 cDNA library using anti-E1 serum. We generated a peptide sequence of 24 amino acids starting from the N-terminus of bovine heart mature E1 beta. The identity of the E1 beta cDNA clone was confirmed by the similarity between the amino acid sequence deduced from the cDNA nucleotide sequence and the known amino acid sequence of bovine heart E1 beta. In Northern analysis of total RNA extracted from human heart, the E1 beta cDNA clone hybridized to a major 1.6 kb and a minor 5.2 kb RNA species.     

Molecular cloning and sequence analysis of a cDNA for factor V activating enzyme.

The complete amino acid sequence of a factor V activator (VLFVA) is deduced from the nucleotide sequence of a cDNA encoding the enzyme. The cDNA was isolated by PCR screening a venomous gland cDNA library of Central Asian Vipera lebetina snake. The full-length cDNA clone, derived from two overlapping fragments, comprises 1563 basepairs which encode an open reading frame of 259 amino acids. The amino acid sequence of VLFVA (235 amino acids) shows significant homology with snake venom and mammalian serine proteinases. It contains 12 half-cysteines which form, by analogy with other serine proteinases, 6 disulfide bridges. VLFVA has the catalytic triad His43-Asp88-Ser182. The amino terminal amino acid valine is preceded by 24 amino acids: a putative signal peptide of 18, mainly hydrophobic, amino acids and an activating peptide of 6, mainly hydrophilic amino acid residues. This is the first cloned factor V activating enzyme from snake venom.     

Primary amino acid sequence of bovine dopamine beta-hydroxylase

Fifty-eight tryptic and Staphylococcus aureus V8 protease generated peptides from bovine dopamine beta-hydroxylase were isolated by reverse-phase high pressure liquid chromatography and sequenced. These peptide sequences were compared with the deduced amino acid sequences of bovine and human dopamine beta-hydroxylase obtained from the cloned cDNAs. Bovine peptide sequences had five differences with the sequence derived from the bovine cDNA, and four of the changes could be accounted for by a single base change in the DNA. N-terminal sequence analysis of the bovine enzyme indicated that it contained two N termini, one of which is 3 amino acids longer than the other and begins with the sequence Ser-Ala-Pro. The amino acid sequences deduced from the bovine and human cDNAs are 19 and 25 amino acids longer, respectively, and these additional amino acids represent leader peptide sequences. Two bovine peptide sequences contained glycosylation sites and gave positive tests for carbohydrate residues, and two others contained the consensus sequence for a glycosylation site but were negative in the carbohydrate test. The bovine enzyme contains 6 Trp, as compared with 7 in the bovine cDNA and 8 in the human cDNA. The protein and bovine cDNA contain 24 Tyr each, as compared with 26 in the human cDNA. These numbers indicate that the true epsilon 1% 280 = 8.95, and, therefore, that it is 28% lower than the previously determined value. The data also identify 5 His-containing regions that may be involved in Cu2+ coordination at the active site.     

Molecular cloning and nucleotide sequence of a cDNA clone coding for rat brain myelin proteolipid

A cDNA library from rat brain was constructed in pBR322 and screened with a 14-mer mixed oligonucleotide probe based on residues 231-235 of bovine proteolipid (PLP). A positive clone was isolated: it contained a 1334-base-pair cDNA insert and was subjected to DNA sequence analysis. The cDNA encoded information for the 276 amino acids of rat PLP. Comparison with bovine PLP sequence showed a complete amino acid sequence homology except for 4 amino acid residues.     

Peptide alignment of the porcine 21-hydroxylase cytochrome P-450 using a cDNA sequence of the corresponding bovine enzyme

The amino acid sequence deduced from a cDNA clone of the bovine adrenal steroid 21-hydroxylase cytochrome P-450 has been utilized to align peptide sequences derived from the corresponding porcine enzyme. Homology analysis revealed that only fifty percent of the amino acid sequence predicted by the cDNA clone overlapped with peptide sequences from the porcine enzyme. The homology in the remaining portions of the bovine sequence was restored by considering amino acid sequences predicted by the two additional DNA reading frames of the cDNA sequence. Forty eight percent of the bovine sequences predicted by the two alternate reading frames showed strong homology with the porcine peptide sequences. A minimum of 4 nucleotide sequencing errors account for the observed reading frame alterations and the approximate position of each error in the bovine cDNA sequence has been established.     

Identification and characterization of the bovine immunodeficiency-like virus tat gene.

A cDNA clone of the bovine immunodeficiency-like virus (BIV) trans-activator gene (tat) was identified and characterized. The tat cDNA clone was generated by splicing, and on the basis of sequence analysis, the Tat protein was found to be encoded entirely by the first exon. It is 103 amino acids in size and shares sequence homology with the human immunodeficiency virus (HIV) Tat. The BIV tat clone can trans activate the BIV promoter effectively, as measured by the expression of the bacterial chloramphenicol acetyltransferase gene, when transfected into bovine cells. Besides activating the BIV promoter, the BIV Tat can also trans activate the HIV promoter effectively. It is possible that BIV Tat and HIV Tat employ similar mechanisms in trans activation of the viral long terminal repeat-directed gene expression.