浅谈"协同进化"

“协同进化”(Coevolution)一词是 196 4年 Ehrhich和 Raven在《Evolution》(进化 )杂志上正式首次提出 ,用以阐述昆虫与植物 (蝴蝶及其采食植物之间 )进化历程中的相互关系。现已广泛用于描述自然界中相互之间有密切关系的物种 (甚至器官 )的进化模式 ,是进化生物学、系统学、生态学乃至发育生物学等学科的一个研究热点。援引《Biology》(Starr主编 ,1994 ,第 2版 )中的定义 ,协同进化是指自然生境中两个或多个物种 ,由于生态上的密切联系 ,其进化历程相互依赖 ,当一个物种进化时 ,物种间的选择压力发生改变 ,其他物种将发生与之相适应…     

植物进化与物种绝灭现象

物种绝灭现象在自然界是普遍存在的,绝灭因素是多种多样的,的绝灭和进化是生物发展史上的两个重要方面,进化表现出连续,而绝灭表现出间断,后者对植物进化具有重要意义。     

种间作用对物种分布模拟的影响及建模方法

物种分布模型(SDMs)通过量化物种分布和环境变量之间的关系,并将其外推到未知的景观单元,模拟、预测地理空间中生物的潜在分布,是生态学、生物地理学、保护生物学等研究领域的重要工具.然而,目前物种分布模型主要采用非生物因素作为预测变量,由于数据量化和建模表达困难,生物因素特别是种间作用在物种分布模型中常被忽略,将种间作用...     

种间杂种染色体配对所揭示的披碱草属植物StY基因组分化及其进化意义

在同倍体(homoploid)植物杂交-分化的物种形成(speciation)过程中,杂交后代与亲本之间的有效生殖隔离是新物种形成的关键。杂种与亲本在时间、空间、生态环境和基因水平上的隔离,保证了杂种后代的分化和稳定,并逐渐形成新物种。为了研究披碱草属(Elymus)含StY基因组四倍体物种的系统演化关系,本文对来自亚洲不同地理分布区的26种披碱草属植物进行了大规模的种间杂交和杂种F1减数分裂染色体配对行为的分析。结果表明各物种之间有不同程度的杂交亲合力,杂交结实率在各杂交组合之间有较大的变异(在4．8％-100％之间);但各物种之间的杂种F1完全不育。证明各物种之间形成了明显的生殖隔离。种间杂种F1减数分裂中期-I染色体配对分析的结果进一步表明,StY基因组随各披碱草属物种地理分布的不同而有不同程度的分化。来自同一分布区(如东亚或西亚分布区之内)物种的StY基因组分化程度较低,但来自不同分布区(如东亚和西亚)物种之间相同的StY基因组具有显著的分化。表明地理隔离对含StY基因组物种的分化起到了十分重要的作用。通过对种间和种内杂种F1的减数分裂异常现象和染色体配对频率变化规律的分析,作者认为细胞学水平的变化,如基因组同源性的分化和染色体结构的变异等都在杂种后代与亲本之间产生生殖隔离并逐渐形成新物种的进化过程中起到了积极的作用。     

从种内、种间化感作用分析入侵种薇甘菊及其近邻种的非协同进化趋势

为预测入侵植物与其邻近物种间的非协同进化趋势,分别提取薇甘菊(Mikania micrantha)及其近邻种五爪金龙(Ipomoea cairica)、葛藤(Pueraria lobata)和鸡矢藤(Paederia scandens)的叶片水提液处理幼苗,对薇甘菊及其近邻种的种内、种间化感作用进行研究。结果表明,薇甘菊对3种近邻种的化感作用呈现不同趋势(SE=0.50, 0.61,–0.16),但种内存在较强的化感促进作用(SE=0.61),说明其种内化感竞争较弱;葛藤的种内化感促进作用(SE=0.32)弱于薇甘菊,种间的化感促进作用与薇甘菊相似(SE=0.52, 0.50);五爪金龙种内化感促进作用(SE=0.06)弱于薇甘菊和葛藤(SE=0.32),种间促进作用(SE=0.24)弱于薇甘菊(SE=0.61);鸡矢藤的种内、种间化感作用均表现为抑制作用(SE=–0.18,–0.07),说明种内、种间化感竞争较强。野外调查表明4种植物分布的频度和多度均表现为薇甘菊葛藤五爪金龙鸡矢藤,这与化感竞争力结果一致。可见,种内与种间化感作用在入侵植物与近邻植物的综合竞争力中扮演着极为重要的作用,这为入侵种与近邻种之间的非协同进化趋势指明了方向。     

从动物驯养谈进化问题

人类驯化和家养动植物的历史可以上溯至一万多年前。2002年Diamond发表于英国《自然》杂志上的章认为,对动植物的驯养是人类在过去13000年的历史中所取得的最重要进步。从某种意义来讲,人类社会的真正兴起与动植物的驯养是密切相关的。动植物的家养,首先是为人类提供了大量食     

由环境关系揭示物种演化与人类进化性质及进步实质

综合一些新研究和人类进化历史,阐明人类进化与物种演化性质不同：物种演化是适应特定环境,与特定环境产生依存关系,人类进化是适应不同环境或不再依存特定环境,出现与环境关系性质改变。说明人类进步实质是脑等变化带来与环境关系性质改变,使人类生存和进步出现由偶然性到必然性变化,进步标准是适应不同环境,即出现与特定环境依存度减小的趋势性变化。以环境关系为衡量尺度,对物种进步标准、进化定义和进化树结构提出修正意见。     

内蒙古昆虫物种多样性分布格局及其机制

物种多样性的地理分布格局及其机制是宏生态学和生物地理学的核心问题之一。区域尺度与局域尺度的影响因素, 如温度、降水、海拔变化、生境过滤、捕食、竞争与互惠等, 共同影响昆虫物种多样性的分布格局。然而, 迄今为止少有研究同时讨论不同尺度驱动因子对昆虫多样性地理分布格局的影响。本文基于内蒙古自治区86个旗县的昆虫多样性数据, 结合各地年平均气温、年降水量、古气候变化、海拔变化及植物多样性, 探讨昆虫物种多样性分布格局及其主要驱动因子。结果发现内蒙古昆虫多样性主要受到植物多样性与海拔变化的影响, 而气候因子对昆虫物种多样性的影响并不大。这一结果表明种间关系(食物多样性)与生境异质性可能对内蒙古昆虫多样性的分布格局起着主导作用。     

长白山暗针叶林群落物种多样性维持机制

植物群落物种多样性维持机制一直是生态学研究的热点话题,其中生态位理论和中性理论是被普遍接受的两种理论观点,但是目前关于生态位理论和中性理论在群落物种多样性维持中的相对重要性还没有统一定论。基于长白山暗针叶林群落数据,采用单物种-面积关系模型探究特定树种对邻域物种丰富度的影响,并借助同质性和异质性泊松零模型检验其显著性。(1)群落水平上,在3—15 m空间尺度上,促进种占据优势地位,在>15 m空间尺度上,中性种逐渐取代促进种起主导作用,抑制种比例较低,并且随着空间尺度变化幅度不大。(2)物种水平上,采用同质性泊松零模型检验树种对邻域物种丰富度的影响,臭冷杉、花楷槭、青楷槭在0—20 m空间尺度上对邻域物种丰富度增加起促进作用,黄花落叶松、鱼鳞云杉在0—20 m空间尺度上抑制了邻域物种丰富度增加。花楸树、黑桦和硕桦在全部研究尺度上表现为中性种,髭脉槭、大青杨、红松等在不同研究尺度上表现为不同的作用效果。剔除了生境过滤作用的异质性泊松零模型检验结果与同质性泊松零模型结果差异不显著,表明研究样地内生境过滤作用对多样性格局形成影响不大,各树种间的相互作用对群落物种组成影响较大,进一步证明...     

DNA限制酶切位点的似近分析及猕猴属五个种间进化关系初探

谭远德(1991)在相似(相关)分析的基础上发展了一种称为似近分析方法。之后,谭远德和吴昌谋(1993)将这一方法成功地用于鱼类的核型分类;吴昌谋(1996)和姚世呜等(1996)亦将其运用于蝗虫的核型分类,获得较好的分类结果。王晓佳和谭远德(1994)对似近分析进行拓广,建立了多维似...     

Patterns of evolution of genes disrupted in expression in Drosophila species hybrids

Divergence between species in regulatory pathways may contribute to hybrid incompatibilities such as sterility. Consistent with this idea, genes involved in male fertility often evolve faster than most other genes both in amino acid sequence and in expression. Previously, we identified a panel of male-specific genes under-expressed in sterile male hybrids of Drosophila simulans and D. mauritiana relative to pure species, and we showed that this under-expression is associated with infertility. In a preliminary effort to assess the generalities in the patterns of evolution of these genes, I examined patterns of mRNA expression in three of these genes in sterile F 1 hybrid males of D. pseudoobscura and D. persimilis . F 1 hybrid males bearing D. persimilis X chromosomes under-expressed all these genes relative to the parental species, while hybrids bearing D. pseudoobscura X chromosomes under-expressed two of these three genes. Interestingly, the third gene, CG5762 , has undergone extensive amino acid evolution within the D. pseudoobscura species group, possibly driven by positive natural selection. We conclude that some of the same genes exhibit disruptions in expression within each of the two species groups, which could suggest commonalities in the regulatory architecture of sterility in these groups. Alternative explanations are also considered.     

KRAB型锌指蛋白的进化及在物种演化中的功能

C2H2型锌指蛋白家族是目前发现的哺乳动物中最大的转录/转录调控因子家族,由一小群古老的含有真核锌指结构的转录因子经过多次基因复制和功能分化演化而来。KRAB型锌指蛋白(KRAB-containing zinc finger proteins, KRAB-ZFPs)作为C2H2型锌指蛋白家族中最大的亚家族,最早出现在四足脊椎动物,并随物种的进化数量快速增长,在人类中占据C2H2型锌指蛋白的60%左右。在物种演化中,进化压力主要改变KRAB-ZFPs的DNA结合能力,而KRAB-ZFPs介导的转录抑制能力则稳定存在。同时,多种KRAB-ZFPs能够与KRAB相关蛋白1(KRAB-associated protein 1, KAP1)协同作用沉默哺乳动物中反转录元件的活性,并与之协同进化,严格限制反转录原件的跳跃能力。本文综述了KRAB-ZFPs的数量倍增、锌指结构的灵活多变、KRAB-ZFPs/KAP1的转录抑制能力和反转录元件的跳跃性在促进哺乳动物调控网络的差异、基因组稳定性的变化和物种进化中的作用,旨在进一步揭示KRAB-ZFPs在推动物种稳定演化中的特点和功能。     

Molecular evolution of maize catalases and their relationship to other eukaryotic and prokaryotic catalases

We have compared the nucleotide and protein sequences of the three maize catalase genes with other plant catalases to reconstruct the evolutionary relationship among these catalases. These sequences were also compared with other eukaryotic and prokaryotic catalases. Phylogenies based on distances and parsimony analysis show that all plant catalases derive from a common ancestral catalase gene and can be divided into three distinct groups. The first, and major, group includes maizeCatl, barleyCat1, riceCatB and most of the dicot catalases. The second group is an apparent dicot-specific catalase group encompassing the tobaccoCat2 and tomatoCat. The third is a monocot-specific catalase class including the maize Cat3, barley Cat2, and riceCatA. The maize Cat2 gene is loosely related to the first group. The distinctive features of monocot-specific catalases are their extreme high codon bias at the third position and low degree of sequence similarity to other plant catalases. Similarities in the intron positions for several plant catalase genes support the conclusion of derivation from a common ancestral gene. The similar intron position between bean catalases and human catalase implies that the animal and plant catalases might have derived from a common progenitor gene sequence. Correspondence to: J.G. Scandalios     

Patterns of species richness hotspots and estimates of their protection are sensitive to spatial resolution

Aim

Species richness is a measure of biodiversity often used in spatial conservation assessments and mapped by summing species distribution maps. Commission errors inherent those maps influence richness patterns and conservation assessments. We sought to further the understanding of the sensitivity of hotspot delineation methods and conservation assessments to commission errors, and choice of threshold for hotspot delineation.

Location

United States.

Methods

We created range maps and 30‐m and 1‐km resolution habitat maps for terrestrial vertebrates in the United States and generated species richness maps with each dataset. With the richness maps and the GAP Protected Areas Dataset, we created species richness hotspot maps and calculated the proportion of hotspots within protected areas; calculating protection under a range of thresholds for defining hotspots. Our method allowed us to identify the influence of commission errors by comparing hotspot maps.

Results

Commission errors from coarse spatial grain data and lack of porosity in the range data inflated richness estimates and altered their spatial patterns. Coincidence of hotspots from different data types was low. The 30‐m hotspots were spatially dispersed, and some were very long distances from the hotspots mapped with coarser data. Estimates of protection were low for each of the taxa. The relationship between estimates of hotspot protection and threshold choice was nonlinear and inconsistent among data types (habitat and range) and grain size (30‐m and 1‐km).

Main conclusions

Coarse mapping methods and grain sizes can introduce commission errors into species distribution data that could result in misidentifications of the regions where hotspots occur and affect estimates of hotspot protection. Hotspot conservation assessments are also sensitive to choice of threshold for hotspot delineation. There is value in developing species distribution maps with high resolution and low rates of commission error for conservation assessments.     

鸢尾属部分种种子微形态特征与系统演化关系

用HITACHI S-520型扫描电子显微镜对鸢尾属植物10个种及1变种、1外类群的种子微形态进行观察、比较分析,探讨了鸢尾属植物部分种种子微形态特征分类学意义及系统演化关系。结果表明：鸢尾属植物种子表面微形态特征具有种的稳定性,与分布区无关;同一种的种子凹、凸面微形态差异很大,同一类群比较时应选择相同部位观察。所研究的鸢尾种都为网状（网纹或负网纹）文饰,种间差异明显,微形态特征可用于鸢尾属间、属下系的等级划分,但不适于种下等级鉴别。研究给出了鸢尾属植物种子表面纹饰的系统进化关系,证明了种子表面微形态对鸢尾属植物分类及系统演化关系具有重要意义。     

Extensive mismatches between species distributions and performance and their relationship to functional traits

Mismatches between species distributions and their optimal habitat are predicted by ecological theory and will affect species responses to changing climate. However, empirical tests lack consensus on the prevalence of such mismatches and their underlying mechanisms. Here we present a conceptual framework to quantify the mismatch between optimal conditions for species occurrence and multiple measures of population and individual performance (density, adult growth and survival, and recruitment) and the associated performance reduction, or cost. We quantified these mismatches for 59 tree species in the western US along a soil water balance gradient and found high variability in mismatches among species and among performance measures, often resulting in high costs. We used functional traits to explore how dispersal limitation, migration lags, and competitive exclusion may cause mismatches. Overall, the large variability in mismatches, their costs and the relationship with functional traits highlight the nuanced relationships between species’ performance and their distributions.     

Patterns of sequence divergence and evolution of the S orthologous regions between Asian and African cultivated rice species

A strong postzygotic reproductive barrier separates the recently diverged Asian and African cultivated rice species, Oryza sativa and O. glaberrima. Recently a model of genetic incompatibilities between three adjacent loci: S(1)A, S(1) and S(1)B (called together the S(1) regions) interacting epistatically, was postulated to cause the allelic elimination of female gametes in interspecific hybrids. Two candidate factors for the S(1) locus (including a putative F-box gene) were proposed, but candidates for S(1)A and S(1)B remained undetermined. Here, to better understand the basis of the evolution of regions involved in reproductive isolation, we studied the genic and structural changes accumulated in the S(1) regions between orthologous sequences. First, we established an 813 kb genomic sequence in O. glaberrima, covering completely the S(1)A, S(1) and the majority of the S(1)B regions, and compared it with the orthologous regions of O. sativa. An overall strong structural conservation was observed, with the exception of three isolated regions of disturbed collinearity: (1) a local invasion of transposable elements around a putative F-box gene within S(1), (2) the multiple duplication and subsequent divergence of the same F-box gene within S(1)A, (3) an interspecific chromosomal inversion in S(1)B, which restricts recombination in our O. sativa×O. glaberrima crosses. Beside these few structural variations, a uniform conservative pattern of coding sequence divergence was found all along the S(1) regions. Hence, the S(1) regions have undergone no drastic variation in their recent divergence and evolution between O. sativa and O. glaberrima, suggesting that a small accumulation of genic changes, following a Bateson-Dobzhansky-Muller (BDM) model, might be involved in the establishment of the sterility barrier. In this context, genetic incompatibilities involving the duplicated F-box genes as putative candidates, and a possible strengthening step involving the chromosomal inversion might participate to the reproductive barrier between Asian and African rice species.     

Patterns of feeding behaviour in adult male riodinid butterflies and their relationship to morphology and ecology

Adult butterflies are known to visit a wide variety of food substrates, but, with the exception of flower visitation, little is known about what substances are being sought or what determines substrate choice. This is especially true for the Riodinidae, a large family [c. 1300 spp.) of almost exclusively Neotropical butterflies. We present adult male feeding records for 124 species in 41 genera of Riodinidae (out of a total of 441 species in 85 genera collected in the study), based on ten months sampling in Ecuador. Records of food substrates visited in this study include flowers, damp sand or mud (‘puddling’) and rotting carrion. Rotting carrion placed in traps was the most frequently recorded food source in terms of numbers of individuals and taxa, attracting 89 species from 32 genera. A correlation is found between food substrate choice and morphology, specifically wing area to thoracic volume ratio (WA: TV ratio). Our data suggest the possible existence of two adaptive syndromes whose species have significantly different mean WA:TV ratios and differing suites of accompanying ecological traits, with lower ratios being significantiy correlated with species that were recorded feeding. Among species recorded feeding, carrion feeders and puddlers have significantly lower mean WA:TV ratios than flower nectarers, and carrion feeders have a lower mean WA:TV ratio than species not recorded on this food source, a correlation that is significant across all tribes and within some tribes (Riodinini and Saratoni). We reanalyse previously published data on flight and morphology for species in other butterfly and moth families and show mat the ratio of wing area to thoracic mass is significantly negatively correlated with flight speed and oxygen consumption (a direct indicator of metabolic rate). We suggest that adult male riodinids may puddle and feed at rotting carrion to supplement nutrient stores from larval feeding, not only to increase reproductive success, but also to provide the necessary nutrients to maintain high metabolic rates during rapid flight.     

Endothelium-derived reactive oxygen species: their relationship to endothelium-dependent hyperpolarization and vascular tone

Opinions on the role of reactive oxygen species (ROS) in the vasculature have shifted in recent years, such that they are no longer merely regarded as indicators of cellular damage or byproducts of metabolism--they may also be putative mediators of physiological functions. Hydrogen peroxide (H2O2), in particular, can initiate vascular myocyte proliferation (and, incongruously, apoptosis), hyperplasia, cell adhesion, migration, and the regulation of smooth muscle tone. Endothelial cells express enzymes that produce ROS in response to various stimuli, and H2O2 is a potent relaxant of vascular smooth muscle. H2O2 itself can mediate endothelium-dependent relaxations in some vascular beds. Although nitric oxide (NO) is well recognized as an endothelium-derived dilator, it is also well established, particularly in the microvasculature, that another factor, endothelium-derived hyperpolarizing factor (EDHF), is a significant determinant of vasodilatory tone. This review primarily focuses on the hypothesis that H2O2 is an EDHF in resistance arteries. Putative endothelial sources of H2O2 and the effects of H2O2 on potassium channels, calcium homeostasis, and vascular smooth muscle tone are discussed. Furthermore, given the perception that ROS can more likely elicit cytotoxic effects than perform signalling functions, the arguments for and against H2O2 being an endogenous vasodilator are assessed.