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1.
While modelling habitat suitability and species distribution, ecologists must deal with issues related to the spatial resolution of species occurrence and environmental data. Indeed, given that the spatial resolution of species and environmental datasets range from centimeters to hundreds of kilometers, it underlines the importance of choosing the optimal combination of resolutions to achieve the highest possible modelling prediction accuracy. We evaluated how the spatial resolution of land cover/waterbody datasets (meters to 1 km) affect waterbird habitat suitability models based on atlas data (grid cell of 12 × 11 km). We hypothesized that the area, perimeter and number of waterbodies computed from high resolution datasets would explain distributions of waterbirds better because coarse resolution datasets omit small waterbodies affecting species occurrence. Specifically, we investigated which spatial resolution of waterbodies better explain the distribution of seven waterbirds nesting on ponds/lakes with areas ranging from 0.1 ha to hundreds of hectares. Our results show that the area and perimeter of waterbodies derived from high resolution datasets (raster data with 30 m resolution, vector data corresponding with map scale 1:10 000) explain the distribution of the waterbirds better than those calculated using less accurate datasets despite the coarse grain of the species data. Taking into account the spatial extent (global vs regional) of the datasets, we found the Global Inland Waterbody Dataset to be the most suitable for modelling distribution of waterbirds. In general, we recommend using land cover data of a resolution sufficient to capture the smallest patches of the habitat suitable for a given species’ presence for both fine and coarse grain habitat suitability and distribution modelling.  相似文献   

2.
Masters  J.E.G.  Welton  J.S.  Beaumont  W.R.C.  Hodder  K.H.  Pinder  A.C.  Gozlan  R.E.  Ladle  M. 《Hydrobiologia》2002,483(1-3):185-191
Seven pike Esox lucius L., implanted with radio-transmitters, were tracked throughout autumn and winter in the River Frome, a southern English chalk river. During the first flood events of the year, pike remained within the main river channel but during subsequent flood events, pike could also be found in flooded fields, in drainage ditches or in a millstream. Eighty percent of the fixes over flooded land occurred within 10 m of the riverbank, although distances of up to 89 m from the bank were recorded. In ditches, pike could be found over 250 m from the main river. For pike in ditches and flooded fields, distance from the main river channel was positively correlated with discharge. There was individual variation amongst pike for the habitat types selected, with some pike utilising flooded field or ditch habitat more often than others. The proportion of time spent out of the main river channel does not appear to be related to the size of the pike. It is hypothesised that pike are leaving the main river channel to exploit feeding opportunities in the flooded fields and drainage ditches, rather than using these areas as refugia from high flow conditions.  相似文献   

3.
Discharge fluctuations in the St. Lawrence River (Canada) affect reproduction habitat for Northern pike (Esox lucius Linnaeus). We developed a spatially explicit model for that large-scale river system to predict spawning habitat surfaces available for egg deposition and the potential mortality by dewatering occurring during the embryonic-larval stages. The spatial model used simulated current velocity, wetland type and water temperature at a high spatial resolution over the entire fluvial St. Lawrence River, Canada. Those three variables were integrated into a habitat suitability index (HSI) and weighted according to the literature. A new thermal preferendum curve, based on a field experiment, was included in the HSI, reflecting that the probability of observing pike spawners in a given area increased with temperature. The reproduction chronology was predicted every year with an original model based on air temperature in order to reconstitute the historic habitat surfaces for the period 1960–2000. The results revealed that discharge had a substantial effect on both suitable habitat for egg deposition and potential mortality following dewatering. The best and the largest spawning habitats were identified, as well as the most limiting regions in the river. The present findings have already been used to prepare a new discharge regulation plan for the Lake Ontario–St. Lawrence River system. Guest editors: J. M. Farrell, C. Skov, M. Mingelbier, T. Margenau & J. E. Cooper International Pike Symposium: Merging Knowledge of Ecology, Biology, and Management for a Circumpolar Species  相似文献   

4.
Radio-tagging is widely used for studies of movements, resource use and demography of land vertebrates, with potential to combine such data for predictive modelling of populations from individuals. Such modelling requires standard measures of individual space use, for combination with data on resources, survival, dispersal and breeding. This paper describes how protocols for efficient collection of space-use data can be developed during a pilot study, and reviews the ways in which such data can be used for space-use indices that help answer biological questions, with examples from a study of riverine pike (Esox lucius). Analyses of diurnal activity and spatio-temporal correlation were used to assess when to record locations, and analyses of home range increments were used to define the number of location records necessary to assess seasonal ranges. We stress the importance of developing protocols that use minimal numbers of locations from each individual, so that analyses can be based on samples of many individuals. The efficacy of link-distance (e.g. cluster analysis) and location density (e.g. contouring) techniques for spatial analysis for river fish were compared, and the utility of clipping off areas to river banks was assessed. In addition, a new automated analysis was used to estimate distances along river mid-lines. These techniques made it possible to quantify interactions between individuals and their habitat: including a significant increase in core range size during floods, significant preference for deep pools, and a lack of exclusive territories.  相似文献   

5.
In highly impaired watersheds, it is critical to identify both areas with desirable habitat as conservation zones and impaired areas with the highest likelihood of improvement as restoration zones. We present how detailed riparian vegetation mapping can be used to prioritize conservation and restoration sites within a riparian and instream habitat restoration program targeting 3 native fish species on the San Rafael River, a desert river in southeastern Utah, United States. We classified vegetation using a combination of object‐based image analysis (OBIA) on high‐resolution (0.5 m), multispectral, satellite imagery with oblique aerial photography and field‐based data collection. The OBIA approach is objective, repeatable, and applicable to large areas. The overall accuracy of the classification was 80% (Cohen's κ = 0.77). We used this high‐resolution vegetation classification alongside existing data on habitat condition and aquatic species' distributions to identify reaches' conservation value and restoration potential to guide management actions. Specifically, cottonwood (Populus fremontii) and tamarisk (Tamarix ramosissima) density layers helped to establish broad restoration and conservation reach classes. The high‐resolution vegetation mapping precisely identified individual cottonwood trees and tamarisk thickets, which were used to determine specific locations for restoration activities such as beaver dam analogue structures in cottonwood restoration areas, or strategic tamarisk removal in high‐density tamarisk sites. The site prioritization method presented here is effective for planning large‐scale river restoration and is transferable to other desert river systems elsewhere in the world.  相似文献   

6.
Aim Habitat selection studies have mainly focused on behavioural choices of individuals or on the habitat‐related regional distribution of a population, with little integration of the two approaches. This is despite the fact that traditional biogeography theory sees the geographical distribution of a species as the collective outcome of the adaptive habitat choices of individuals. Here, we integrate individual habitat choices with regional distribution through a bottom‐up Geographical Information System (GIS)‐based approach, by using a 9‐year data set on a large avian predator, the eagle owl (Bubo bubo L.). We further examine the potential population level and biodiversity consequences of this approach. Location The study was conducted in the Trento Region (central‐eastern Italian Alps) and in six other areas of the nearby Lombardia Region in the central Alps. Methods We used stepwise logistic regression to build a habitat suitability model discriminating between eagle owl territories and an equal number of random locations. The model was applied to the whole Trento region by means of a GIS so as to predict suitable habitat patches. The predicted regional distribution (presence–absence in 10‐km grid quadrats) was then compared with the observed one. Furthermore, we compared estimates of biodiversity in quadrats with and without eagle owls, so as to test whether the presence of this top predator may signal macro‐areas of high biodiversity. Results The logistic habitat suitability model showed that, compared with a random distribution, eagle owls selected low‐elevation breeding sites with high availability of prey‐rich habitats in their surroundings. Breeding performance increased with the availability of prey‐rich habitats, confirming the adaptiveness of the detected habitat choices. We applied the habitat suitability model to the 6200 km2 study region by means of a GIS and found a close fit between the observed and predicted regional distribution. Furthermore, population abundance was positively related to the availability of habitat defined as suitable by the above analyses. Finally, high biodiversity levels were associated with owl presence and with the amount of suitable owl habitat, demonstrating that modelling habitat suitability of a properly chosen indicator species may provide key conservation information at the wider ecosystem level. Main conclusions Our bottom‐up modelling approach may increase the conservation‐value of habitat selection models, by (1) predicting local and regional distribution, (2) estimating regional population size, (3) stimulating further hypothesis testing, (4) forecasting the population effects of future habitat loss and degradation and (5) aiding in the identification and prioritization of high‐biodiversity areas.  相似文献   

7.
The ideal free distribution (IFD) theory is one of the most influential theories in evolutionary ecology. It predicts how animals ought to distribute themselves within a heterogeneous habitat in order to maximize lifetime fitness. We test the population level consequence of the IFD theory using 40-year worth data on pike (Esox lucius) living in a natural lake divided into two basins. We do so by employing empirically derived density-dependent survival, dispersal and fecundity functions in the estimation of basin-specific density-dependent fitness surfaces. The intersection of the fitness surfaces for the two basins is used for deriving expected spatial distributions of pike. Comparing the derived expected spatial distributions with 50 years data of the actual spatial distribution demonstrated that pike is ideal free distributed within the lake. In general, there was a net migration from the less productive north basin to the more productive south basin. However, a pike density-manipulation experiment imposing shifting pike density gradients between the two basins managed to switch the net migration direction and hence clearly demonstrated that the Windermere pike choose their habitat in an ideal free manner. Demonstration of ideal free habitat selection on an operational field scale like this has never been undertaken before.  相似文献   

8.
Modelling approaches have the potential to significantly contribute to the spatial management of the deep-sea ecosystem in a cost effective manner. However, we currently have little understanding of the accuracy of such models, developed using limited data, of varying resolution. The aim of this study was to investigate the performance of predictive models constructed using non-simulated (real world) data of different resolution. Predicted distribution maps for three deep-sea habitats were constructed using MaxEnt modelling methods using high resolution multibeam bathymetric data and associated terrain derived variables as predictors. Model performance was evaluated using repeated 75/25 training/test data partitions using AUC and threshold-dependent assessment methods. The overall extent and distribution of each habitat, and the percentage contained within an existing MPA network were quantified and compared to results from low resolution GEBCO models. Predicted spatial extent for scleractinian coral reef and Syringammina fragilissima aggregations decreased with an increase in model resolution, whereas Pheronema carpenteri total suitable area increased. Distinct differences in predicted habitat distribution were observed for all three habitats. Estimates of habitat extent contained within the MPA network all increased when modelled at fine scale. High resolution models performed better than low resolution models according to threshold-dependent evaluation. We recommend the use of high resolution multibeam bathymetry data over low resolution bathymetry data for use in modelling approaches. We do not recommend the use of predictive models to produce absolute values of habitat extent, but likely areas of suitable habitat. Assessments of MPA network effectiveness based on calculations of percentage area protection (policy driven conservation targets) from low resolution models are likely to be fit for purpose.  相似文献   

9.
《Ecological Engineering》2007,29(3):305-315
This paper presents an integrated modelling approach to simulate and assess ecological effects of physical habitat changes in rivers. An ecohydraulic simulation tool was created by combining a 1D hydraulic model based on HEC-RAS software and the fish habitat module of CASiMiR, a fuzzy logic-based ecohydraulic modelling system. This tool was applied on a river stretch commonly occurring in Belgium and elsewhere in Europe. In particular the effect of weir removal on habitat suitability for bullhead (Cottus gobio L.) was simulated. Physical conditions of the studied stretch after weir removal were simulated with a hydraulic model. CASiMiR linked these conditions to ecological expert knowledge to calculate habitat suitability for three life stages of bullhead at four different flow rates based on fuzzy logic. Results indicated that after weir removal, habitat suitability increased significantly for all life stages and all flow rates. The presented approach is promising regarding fish community assessment and ecological river engineering.  相似文献   

10.
Species distribution and endangerment can be assessed by habitat-suitability modelling. This study addresses methodical aspects of habitat suitability modelling and includes an application example in actual species conservation and landscape planning. Models using species presence-absence data are preferable to presence-only models. In contrast to species presence data, absences are rarely recorded. Therefore, many studies generate pseudo-absence data for modelling. However, in this study model quality was higher with null samples collected in the field. Next to species data the choice of landscape data is crucial for suitability modelling. Landscape data with high resolution and ecological relevance for the study species improve model reliability and quality for small elusive mammals like Muscardinus avellanarius. For large scale assessment of species distribution, models with low-detailed data are sufficient. For regional site-specific conservation issues like a conflict-free site for new wind turbines, high-detailed regional models are needed. Even though the overlap with optimally suitable habitat for M. avellanarius was low, the installation of wind plants can pose a threat due to habitat loss and fragmentation. To conclude, modellers should clearly state the purpose of their models and choose the according level of detail for species and environmental data.  相似文献   

11.
We developed a sampling protocol for pike (Esox lucius L., 1758) in large alluvial rivers in order to estimate adult population density and structure. This species is known as an indicator of lowland river biotic integrity in Europe evidencing the interest to determine population densities to a reliable degree of accuracy. A two occasion mark-recapture experiment based on a combination of net fishing and boat electro-fishing was specifically designed for monitoring of backwaters and channel sectors during the annual high flow level of an alluvial river, the Allier (France). Estimated densities calculated by using Chapman-Petersen and Loglinear models were weak, ranging from 0.68 (±0.16) fish.ha?1 to 0.71 (±0.20) fish.ha?1. However, when the densities are divided by the area of potential riverine habitats, pike abundance was calculated as being 15.3 (±3.7) fish.ha?1 to 15.9 (±3.8) fish.ha?1. Pike growth was high and 8 to 9 year-old females were captured. Age and sex distribution emerged as unbalanced, highlighting the precarious status of pike in the studied stretch of the river due to very limited recruitment. Pike were mainly captured in parapotamic side arms which underlines the importance of lateral habitats in semi regulated large alluvial rivers with wide riffle-pool-run sequences dominating geomorphological units.  相似文献   

12.
Habitat suitability and the distinct mobility of species depict fundamental keys for explaining and understanding the distribution of river fishes. In recent years, comprehensive data on river hydromorphology has been mapped at spatial scales down to 100 m, potentially serving high resolution species-habitat models, e.g., for fish. However, the relative importance of specific hydromorphological and in-stream habitat variables and their spatial scales of influence is poorly understood. Applying boosted regression trees, we developed species-habitat models for 13 fish species in a sand-bed lowland river based on river morphological and in-stream habitat data. First, we calculated mean values for the predictor variables in five distance classes (from the sampling site up to 4000 m up- and downstream) to identify the spatial scale that best predicts the presence of fish species. Second, we compared the suitability of measured variables and assessment scores related to natural reference conditions. Third, we identified variables which best explained the presence of fish species. The mean model quality (AUC = 0.78, area under the receiver operating characteristic curve) significantly increased when information on the habitat conditions up- and downstream of a sampling site (maximum AUC at 2500 m distance class, +0.049) and topological variables (e.g., stream order) were included (AUC = +0.014). Both measured and assessed variables were similarly well suited to predict species’ presence. Stream order variables and measured cross section features (e.g., width, depth, velocity) were best-suited predictors. In addition, measured channel-bed characteristics (e.g., substrate types) and assessed longitudinal channel features (e.g., naturalness of river planform) were also good predictors. These findings demonstrate (i) the applicability of high resolution river morphological and instream-habitat data (measured and assessed variables) to predict fish presence, (ii) the importance of considering habitat at spatial scales larger than the sampling site, and (iii) that the importance of (river morphological) habitat characteristics differs depending on the spatial scale.  相似文献   

13.
A brief review is provided in some advances in understanding the ecology of pike Esox lucius Linnaeus over the last 10 years. Based on long-term studies and manipulative, often short-term experiments (laboratory, field and mesocosms) several established theories have been supported, as well as new concepts developed. Despite their wide distribution pike show low levels of polymorphism and divergence indicative of a recent common ancestral population. Recent genetic studies, however, indicate a single refugium in North America compared to several refugia in Europe. Pike are found in rivers, lakes and weakly saline waters. Variables such as growth and mortality are mainly affected by factors such as temperature, water transparency, productivity, availability of prey and density of pike and other predators. In choice of habitat pike have been shown to support the ideal free-distribution theory. The importance of macrophyte habitat in the life history of pike has been reconfirmed and pike have been shown to be flexible in response to water clarity. Pike are extremely ‘plastic’ in choice of prey types, prey size and in response to prey behaviour (e.g. they are unaffected by shoal size). Predation by pike not only affects abundance and biomass of prey (including younger and smaller pike through cannibalism which plays a major role in population dynamics, other fishes and invertebrates) but also evolution and adaptation of their morphology (in particular body shape) and behaviours. There appears to be no relationship between stock and recruitment. Recruitment is influenced by several abiotic factors in lakes and rivers. Pike play a major role in structuring freshwater communities and have been used in stocking programmes to improve water quality (biomanipulation). Many new concepts have been developed in pike behaviour in maximizing these stocking programmes both in biomanipulation and fisheries management. Despite many recent advances in understanding the ecology of pike, particularly at the individual level, developments in quantifying and modelling the role of pike as a top predator in large ecosystems have been limited, probably due to the difficulties of sampling natural populations. Guest editors: J. M. Farrell, C. Skov, M. Mingelbier, T. Margenau & J. E. Cooper International Pike Symposium: Merging Knowledge of Ecology, Biology, and Management for a Circumpolar Species  相似文献   

14.
Increasing demand for water and a desire for greater human water security has facilitated the global expansion of dams, with river regulation acknowledged as the leading cause of biodiversity decline in rivers. Native biota within these stressed systems are also impacted by reductions in habitat availability, decreased hydraulic diversity, increased sedimentation, movement barriers, invasive species and altered flows that may profoundly change the character and functioning of rivers. Construction or enlargement of reservoirs is continuing, and whilst downstream impacts are often considered, upstream impacts receive far less attention. We develop a population model to examine the impacts of reservoir expansion on a threatened riverine species in South Eastern Australia: the two-spined blackfish. We examined two processes, loss of breeding habitat and increased predation, directly linked to reservoir expansion as well as a broader threat of recruitment failure due to sedimentation. These threatening processes were assessed using the expected minimum population size as an indicator of risk. As is often the case for threatened species, limited data were used to parameterise the model and sensitivity analysis performed to assess the appropriateness of the model parameterisation. The outcomes indicate that the two-spined blackfish population is vulnerable to the loss of breeding habitat particularly if two-spined blackfish are unable to spawn in the larger dam, although this vulnerability is ameliorated if the whole river is accounted for. Including possible impacts from the resident trout population for the whole river, indicates the two-spined blackfish to be vulnerable to low level predation particularly if the trout population have a high growth rate. Population modelling has rarely been used to predict the consequences of dam construction on aquatic species/communities. The example here shows it to be a powerful tool to visualise and quantify potential biodiversity outcomes.  相似文献   

15.
1.  Most species' surveys and biodiversity inventories are limited by time and money. Therefore, it would be extremely useful to develop predictive models of animal distributions based on habitat, and to use these models to estimate species' densities and range sizes in poorly sampled regions.
2.  In this study, two sets of data were collected. The first set consisted of over 2000 butterfly transect counts, which were used to determine the relative density of each species in 16 major habitat types in a 35-km2 area of fragmented landscape in north-west Wales. For the second set of data, the area was divided into 140 cells using a 500-m grid, and the extent of each habitat and the presence or absence of each butterfly and moth species was determined for each cell.
3.  Logistic regression was used to model the relationship between species' distribution and predicted density, based on habitat extent, in each grid square. The resultant models were used to predict butterfly distributions and occupancy at a range of spatial scales.
4.  Using a jack-knife procedure, our models successfully reclassified the presence or absence of species in a high percentage of grid squares (mean 83% agreement). There were highly significant relationships between the modelled probability of species occurring at regional and local scales and the number of grid squares occupied at those scales.
5.  We conclude that basic habitat data can be used to predict insect distributions and relative densities reasonably well within a fragmented landscape. It remains to be seen how accurate these predictions will be over a wider area.  相似文献   

16.
Density-dependent habitat selection theory was mainly tested on active foragers and therefore its applicability to trap-building predators is poorly understood. The high sensitivity of trap-building predators to changes in their physical environment, combined with their limited movement capability, can lead to habitat specialization, reducing their utilization of alternative habitats. We studied density-dependent habitat selection in two pit-building antlions, differing in their habitat utilization spectrum. The habitat generalist, Myrmeleon hyalinus, inhabits and performs equally well in both sand- and loess-derived soils, although preferring the former, more productive coarse-grained soils. In contrast, the habitat specialist, Cueta lineosa, only inhabits fine-grained soils such as loess, while showing reduced foraging performance in coarse-grained sandy soils. We allowed larvae to select between these two soils, while manipulating con-specific density and initial stocking position. Irrespective of the initial stocking position, the number of M. hyalinus pits in the sand was positively correlated with the number of con-specific pits in the loess, implying that this species is a density-dependent habitat selector. Furthermore, these patterns of density-dependence were consistent with the expectations of ideal pre-emptive distribution (i.e., strong non-linearity in the distribution of antlions between soils with increased total density), suggesting that interference competition largely dictates habitat selection in this species. In contrast, the habitat specialist showed constant habitat selectivity, as neither con-specific density nor initial stocking positions influenced its habitat preference. Although mainly tested on active foragers, habitat selection theory can be applicable for trap-building predators, demonstrating how mechanisms operating at the individual level influence spatial distribution patterns.  相似文献   

17.
18.
Expansion within breeding colonies may critically depend upon the availability of suitable breeding habitat. Here we use topographic modelling in a GIS to characterise suitable pupping habitat and accurately predict the pattern of colonisation in an expanding grey seal breeding colony – the Isle of May (Scotland). We use high resolution images from large format aerial photographs of the colony to generate sub‐metre accurate Digital Terrain Models (DTMs). GIS modelling with these DTMs provides topographic measures of elevation, slope and ease of access to sea and freshwater pools at a 2 m grid cell size. Seal locations during the 1994 breeding season, with sex‐age class, were also digitised from the same images. We examine how the physical attributes of cells (locations) with and without pups differ and identify areas suitable for pupping but remaining unoccupied during 1994. We predict patterns of future colonisation by characterising areas differentiated by the densities of pups within 5 m grid cells and identifying areas, both occupied or unoccupied, with a potential for increased future pupping densities. Our predictions were tested by examining pup distributions observed in the 1998 breeding season. Occupied sites were significantly closer to freshwater pools and access to the sea (p<0.001) than unoccupied sites suggesting that proximity to water may restrict colony expansion before all areas of suitably flat terrain are occupied. All pup density classes occurred in sites with similar slope values and distance to pools. However, higher pupping densities occurred closer to access points (p=0.014). Pup densities observed in 1998 revealed that our 1994 predictions were accurate (p<0.0001). Only 12% of 466 grid cells had higher densities in 1998 than predicted, of which 88% differed by only 1 pup. These incorrectly classified cells occurred at the expanding edge of the colony (in a more topographically homogenous area) and at the main access points from the sea (major traffic zones). These results demonstrate the value of the accurate quantification of topographic parameters at the appropriate spatial grain (in this case below the size of the individual) for use in habitat classification and predictions of habitat utilisation.  相似文献   

19.
20.
1. The effects of predation risk, fish density and discharge on habitat use by juvenile brown trout, Salmo trutta, in four artificial streams were studied. Each stream contained three habitats, riffles, runs and pools, the latter two each being further divided into shallow margins and deeper mid-regions. 2. The presence of northern pike, Esox Indus, caused trout to decrease use of pool midregions, where pike also occurred, and to increase use of other habitats. Increasing the number of trout caused trout to increase use of pools and the shallow margins of runs. Decreasing discharge reduced the area of the run and pool margins covered by water, thereby reducing use of these areas by trout. 3. Habitat selection indices for the different treatments were calculated. The data indicated that riffles and the mid-regions of runs were preferred habitats, whereas run margins and pools were inferior habitats used when intraspecific fish densities were high. 4. Despite density- and discharge-dependent habitat use by trout, the number of trout consumed by pike was independent of trout density and discharge. 5. The results reveal the flexibility of habitat use by trout and illustrate the potential danger of applying data on habitat use in one stream to others where habitat availability and bioric interactions may differ.  相似文献   

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