A faecal index of diet quality that predicts reproductive success in a marsupial folivore

Estimating the nutritional value of a herbivore’s diet is difficult because it requires knowing what the animal eats, the relative quality of each component and how these components interact in relation to animal physiology. Current methods are cumbersome and rely on many assumptions that are hard to evaluate. We describe a new method for estimating relative diet quality directly from faeces that avoids the problems inherent in other methods. We combine this method with near infrared reflectance spectroscopy (NIRS) to analyse many samples and thus provide a technique with immense value in ecological studies. The method stems from the correlation between the concentrations of dietary and faecal nitrogen in herbivores eating a tannin-free diet, but a weaker relationship in browsers that ingest substantial amounts of tannins, which form complexes with proteins. These complexes reduce the availability of nitrogen and may increase faecal nitrogen concentrations. Using the tannin-binding compound, polyethylene glycol, we showed that tannin-bound nitrogen is a significant and variable part of faecal nitrogen in wild common brushtail possums (Trichosurus vulpecula). We developed a technique to measure faecal available nitrogen and found that it predicted the reproductive success of female brushtail possums in northern Australia. Faecal available nitrogen combined with NIRS provides a powerful tool for estimating the relative nutritional value of the diets of browsing herbivores in many ecological systems. It is a better indicator of diet quality than other commonly used single-nutrient measures such as faecal nitrogen and foliage analysis paired with observed feeding behaviour.     

Gastrointestinal nematodes and dietary fibre: Two factors to consider when using FN for wildlife nutrition monitoring

Faecal nitrogen (FN) – the combination of metabolic nitrogen and residual food nitrogen – has been used as a proxy for diet quality in wild and domestic ruminants for over half a century. However, a common misconception in some of these studies is that FN is a direct proxy for dietary N, in spite of experimental evidence that links FN to general diet digestibility. Additionally, gastrointestinal nematodes (GIN) can alter N metabolism and increase FN by various mechanisms. To clarify the role of dietary N, fibre and GIN as a factor in FN excretion, 10 naturally parasitised sheep were fed two different isocaloric diets (LPF: low-protein, low-fibre; HPF: high-protein, high-fibre). One month after these diets began, a single anthelmintic treatment was applied to remove GIN, after which the sheep were kept on the same diet for an additional 2 weeks. Throughout the experiment, individual faecal samples were obtained to estimate both FN and GIN intensity (using faecal egg counts, FEC). In addition, two blood samples were taken before and after deworming to measure serum total protein concentrations (TP) as a proxy for protein absorption. In spite of the difference in dietary protein, FN was higher on an LPF diet, supporting the overall digestibility concept. The influence of GIN on FN was later revealed by the anthelmintic treatment, which led to a decrease of FEC and FN in both dietary groups. Serum total protein showed a slight but non-significant increase in both groups after the anthelmintic treatment. Our study supports not only the concept that FN is a proxy for diet digestibility, and not directly for dietary N, but also that gastrointestinal nematodes limit its use as a proxy for diet quality in ruminants, especially under high parasite loads (e.g., 1000 faecal eggs per gram of faeces). Such limitations should be considered before using FN for wildlife nutrition monitoring. Some recommendations are given to avoid misinterpretations.     

Food Sorting by Collared Lemmings (Dicrostonyx groenlandicus) and Prairie Voles (Microtus ochrogaster): A Cautionary Note for Digestibility Studies

Small herbivores are often confronted with poor quality diets; in response to this situation, they may sort their food to increase diet quality. Neutral detergent fiber (NDF) levels were measured in three pelleted diets fed to collared lemmings (Dicrostonyx groenlandicus) and prairie voles (Microtus ochrogaster) and compared to levels in orts collected from the same diets and animals. Lemmings sorted and discarded the fibrous parts of food pellets on all three diets (17.3% to 25.9% higher NDF in orts), whereas voles sorted out fibrous particles on only one diet. Calculations of NDF digestibility were significantly reduced by particle sorting (up to 16.9% decrease in digestibility). In reviewing the literature, we found that in more than half of studies examined, orts may not have been analyzed for these differences. Researchers must carefully consider such effects, especially when conducting digestibility studies with herbivores on pelleted diets.     

Impact of animal density on cattle nutrition in dry Mediterranean rangelands: a faecal near-IR spectroscopy-aided study

In the context of determining the sustainable carrying capacity of dry-Mediterranean herbaceous rangelands, we examined the effect of animal density on cattle nutrition, which is fundamental to animal performance and welfare. The effects on dietary components of low (0.56 cows/ha; L) and high (1.11 cows/ha; H) animal densities were monitored for three consecutive years in grazing beef cows. In the dry season (summer and early autumn), cows had free access to N-rich poultry litter (PL) given as a dietary supplement. In each season, near-IR spectroscopy (NIRS) was used to predict the chemical composition of herbage samples (ash, NDF, CP, in vitro dry matter digestibility (IVDMD) and metabolizable energy (ME) content from IVDMD). Near-IR spectroscopy was applied also to faecal samples to determine the chemical composition of the diet selected by the animal, as well as the contents of ash, NDF and CP in the faeces themselves. A faecal-NIRS equation was applied to estimate the dietary proportion of PL. Seasonal categories were green, dry without PL supplementation and dry with it. We found no effects of animal density on nutrition during the green season but effects were apparent when cows consumed dry pasture. Ash content predicted by faecal NIRS was higher in the diet than in plant samples clipped from pasture, which infers that cows ingested soil. Dietary and faecal ash contents were higher (P<0.05) at the H, implying greater soil intake in these animals. During the dry period, dietary contents of ME were higher in L than in H (P<0.05). Poultry litter supplementation was associated with a marked increase (P<0.01) in dietary and faecal CP contents. Poultry litter represented 0.45 and 0.59 of the diet in treatments L and H, respectively (P<0.05). Consequently, treatment H had higher faecal protein (P<0.05). A tendency of higher dietary protein (P=0.08) and lower dietary NDF (P=0.10) in treatment H was probably related to greater PL ingestion. Given that high and sustained rates of poultry litter consumption are detrimental to animal health, the above results cast doubts on the long-term sustainability of the higher of the animal densities tested. Although it may be sustainable vis-à-vis the vegetation, treatment H may have exceeded the boundaries of what is acceptable for cow health. Chemical information revealed with NIRS can be used to evaluate whether animal densities are compatible with animal health and welfare standards and can play a role in determining the carrying capacity of Mediterranean rangelands.     

The relationship between forage cell wall content and voluntary food intake in mammalian herbivores

• 1 It is generally assumed that animals compensate for a declining diet quality with increasing food intake. Differences in the response to decreasing forage quality in herbivores have been postulated particularly between cattle (ruminants) and horses (hindgut fermenters). However, empirical tests for both assumptions in herbivorous mammals are rare.
• 2 We collected data on voluntary food intake in mammals on forage‐only diets and related this to dietary neutral detergent fibre (NDF) content, assuming a nonlinear correlation between these measurements. Generally, the paucity of corresponding data is striking.
• 3 Elephants and pandas showed very high food intakes that appeared unrelated to dietary fibre content. Only in small rodents, and possibly in rabbits, was an increase in food intake on forages of higher NDF content evident. In particular, other large herbivores, including horses, followed patterns of decreasing intake with increasing forage NDF, also observed in domestic cattle or sheep.
• 4 For large herbivores, empirical data therefore do not – so far – support the notion that intake is increased in response to declining diet quality. However, data are in accord with the assumption that most large herbivores have an anticipatory strategy of acquiring body reserves when high‐quality forage is available, and reducing food intake (and potentially metabolic losses) when only low‐quality forage is available.
• 5 Intake studies in which the influence of digestive strategy on food intake capacity is tested should be designed as long‐term studies that outlast an anticipatory strategy and force animals to ingest as much as possible.
• 6 We suggest that a colonic separation mechanism coupled with coprophagy, in order to minimize metabolic faecal losses, is necessary below a body size threshold where an anticipatory strategy (living off body reserves, migration) is not feasible. Future studies aimed at investigating fine‐scale differences, for example between equids and bovids, should focus on non‐domesticated species.

     

Effect of high fibre diets formulated with different fibrous ingredients on performance,nutrient digestibility and faecal microbiota of weaned piglets

The aim of the experiment on 180 weaned piglets (8.9 kg body weight) was to investigate the influence of high fibre diets formulated with different fibrous ingredients on performance, nutrient digestibility, diarrhoea incidence and numbers of faecal microbiota. The dietary treatments included a Control diet and five high fibre diets formulated with different fibre sources including wheat bran, soybean hulls, naked oat hulls, palm kernel expeller and bamboo fibre. The high fibre diets averaged 14.6% neutral detergent fibre with different non-starch polysaccharides (NSP) components and were fed ad libitum for 28 d. Faecal samples were collected during the last 3 d of the experiment and the apparent total tract digestibility of nutrients and fibre components were determined. Pigs fed the Control and wheat bran diets had a higher (p ≤ 0.05) average daily gain (ADG) than pigs fed the palm kernel expeller and bamboo meal diets. The reduced ADG for pigs appeared to be related to reductions in the digestibility of gross energy and dry matter, respectively. The feed-to-gain ratio was significantly higher (p ≤ 0.05) for pigs fed the fibre diets. The digestibility of NSP components was different among the treatments. The diarrhoea incidence was not affected by treatments. The abundance of faecal bifidobacteria was significantly higher (p ≤ 0.05) for pigs fed the wheat bran diet than for pigs fed the bamboo meal diet. It was concluded that the diets formulated with different fibre sources when fed to weaned piglets have different effects on pig performance, nutrient digestibility and numbers of faecal microbiota. The wheat bran diet rich in arabinoxylans enabled a better performance than the other tested diets with fibre addition.     

大熊猫和小熊猫粪便DNA提取的简易方法

采集了大熊猫和小熊猫的新鲜粪便样品 ,使用 1 0 0 %乙醇保存。通过重复离心富集研究动物的肠道脱落细胞 ,并使用乙醇和双蒸水洗涤以除去抑制物。用 1 %的SDS快速裂解细胞 ,离心除去残渣后 ,向裂解液中加入蛋白酶进行消化。消化结束后使用等体积的酚 /氯仿抽提 ,乙醇沉淀DNA。用双蒸水溶解粪便DNA后 ,使用PCR产物纯化试剂盒对粪便DNA进行纯化。电泳检测结果显示 ,从乙醇保存的大、小熊猫粪便样品中抽提到高质量的粪便DNA。对线粒体控制区、细胞色素b基因、 1 2SrRNA基因的PCR扩增反应以及测序结果也证实了样品保存方法和DNA抽提方法可靠而高效。此方法使用实验室内常用的分子生物学试剂 ,不仅克服了分子粪便学研究中常见的抑制物粪便DNA微量降解严重等障碍 ,与商业化的粪便抽提试剂盒 (QIAampDNAStoolMiniKit,Qiagen)相比还是一种经济的试验方法 (抽提反应成本为试剂盒的 1 / 5 )。文中还对粪便DNA内细菌基因组等背景DNA可能对分子粪便学试验结果的影响进行了探讨。在基于PCR技术的遗传学研究中 ,对于植食性动物而言 ,粪便内的背景DNA对目标动物DNA片断的扩增和序列测定未见影响 ;但对于肉食性动物 ,则必须考虑被捕食者基因组对试验可能产生的影响 ,应谨慎对待     

A dual marker technique to estimate individual feed intake in young pigs

Accurate estimation of individual feed intake (FI) of pigs could help better understand the variation in performance between individual animals. We studied dual marker methods to estimate individual FI in pigs. This method is based on the measurement of the ratio between two indigestible markers in faeces. Twelve 6.5-week-old individually housed male pigs were assigned to one of three oral dosing treatments supplying 180 mg of ytterbium chloride (YbCl₃)/day and 111 mg of dotriacontane (C32)/day as reference markers, either once (R1), three times (R3) or five times (R5) daily. Pigs were offered a diet containing 0.46 g/kg of chromium chloride (CrCl₃) and 0.15 g/kg of hexatriacontane (C36) as in-feed markers. The experiment lasted for 10 days: days ?5 to 0: adaptation; days 1–3: dosing of reference marker; days 2–4: total faecal collection. Spot faecal samples were taken on day 3 at 1200 h, 1700 h and on day 4 at 0700 h. Pigs were fed restrictedly three times daily, at 133.6 g/kg BW^0.60. Individual measured FI was recorded daily and was compared to predicted FI using the ratio of the dual marker pairs (Yb:Cr and C32:C36), both in total faecal collection and spot samples. Due to unequal variance, R1 pigs were omitted from the statistical treatment comparison. When using total faecal collection samples, the absolute prediction error (APE) (predicted FI minus measured FI) in R3 and R5 pigs was numerically lower than in R1 pigs, regardless of the marker pair used. The APE measured by C32:C36 was numerically lower than measured by Yb:Cr at all frequencies, and significantly (P = 0.039) in R3 pigs (C32:C36: 0.15 ± 0.02 kg/day; Yb:Cr: 0.29 ± 0.04 kg/day). This was related to a larger difference in faecal recovery between Yb and Cr compared with C32 and C36. Daily total faecal collection revealed that for R3 pigs, starting faecal collections 2 days after the onset of provision of the reference marker improved the APE when compared with starting after 1 day. When using C32:C36 to predict feed intake, pooled, but not single spot samples gave similar APEs compared with total faecal collections. Therefore, we recommend dosing the reference marker three times per day for 2 days on days 1 and 2, combined with pooled spot faecal sampling collected on days 3 and 4. In this way, absolute prediction errors of 10%-15% of simultaneously measured intakes of multiple nutrient resources in a complex housing system are feasible using the dual marker technique.     

Interactions among host diet, nutritional status and gastrointestinal parasite infection in wild bovids

In this study, I explored the interactions among host diet, nutritional status and gastrointestinal parasitism in wild bovids by examining temporal patterns of nematode faecal egg shedding in species with different diet types during a drought and non-drought year. Study species included three grass and roughage feeders (buffalo, hartebeest, waterbuck), four mixed or intermediate feeders (eland, Grant's gazelle, impala, Thomson's gazelle) and two concentrate selectors (dik-dik, klipspringer). Six out of the nine focal species had higher mean faecal egg counts in the drought year compared to the normal year, and over the course of the dry year, monthly faecal egg counts were correlated with drought intensity in four species with low-quality diets, but no such relationship was found for species with high-quality diets. Comparisons of dietary crude protein and faecal egg count in impala showed that during the dry season, individuals with high faecal egg counts (> or =1550 eggs/g of faeces) had significantly lower crude protein levels than individuals with low (0-500 eggs/g) or moderate (550-1500 eggs/g) egg counts. These results suggest that under drought conditions, species unable to maintain adequate nutrition, mainly low-quality feeders, are less able to cope with gastrointestinal parasite infections. In particular, during dry periods, reduced protein intake seems to be associated with declining resilience and resistance to infection.     

Faecal soiling and gastrointestinal helminth infection in lambs

The accumulation of faeces in the wool of the breech area (tail, perineum and anus) of lambs, known as faecal soiling, has been shown to be one of the major factors predisposing sheep to blowfly strike. However, the causes of faecal soiling of lambs in the UK are not clearly understood. Hence, in this investigation, the relationships between faecal soiling, gastrointestinal parasitic nematode infection and resultant diarrhoea were examined in a longitudinal study of 200 lambs at two farms in south-west England. Faecal egg counts, pasture worm burdens, faecal soiling and growth rates were recorded for individually tagged lambs over the summer of 2003. Grass growth and nutritional composition (protein and fibre) and weather data were also recorded over this period. Analysis using linear mixed models showed that faecal soiling was associated with higher strongyle-type egg counts, longer periods since worming, lower live-weights, female gender, lower faecal consistency and pasture quality. The data indicate that dag scoring, especially in mid- to late summer, could be used as a rapid, non-invasive technique for selecting animals, particularly lambs, with high faecal egg counts for selective drenching to reduce the incidence of anthelmintic resistance. Selective drenching of lambs with high dag scores would also be expected to aid in the control of blowfly strike.     

Nutrient leaching and settling rate characteristics of the faeces of Atlantic salmon (Salmo salar L.) and the implications for modelling of solid waste dispersion

The present study determined the settling velocity and leaching rates of carbon and nitrogen from the faecal matter of Atlantic salmon (Salmo salar L.) fed two commercial diets, high energy (HE) and standard, in three separate experiments (December, March and May) which coincided with winter, spring and summer. Faecal settling velocities for individual samples were in the range of 3.7–9.2 cm s^?1. There were significant differences (P < 0.05) in settling velocities among the three experiments, with lowest velocities measured in faecal samples collected in winter and highest velocities measured in samples collected in summer. There were no significant differences (P > 0.05) in faecal settling velocity among fish fed the different diet types. Faecal nutrient content in the different treatment groups prior to leaching was 269–318 mg g^?1 for carbon and 28–37 mg g^?1 for nitrogen. Both carbon and nitrogen contents were higher in faeces from fish fed the standard diet than in fish fed the HE diet (P < 0.05). Thus the use of HE diets resulted in a 12% reduction in faecal carbon content and an 8% reduction in faecal nitrogen when compared with standard diets. There were no consistent differences in faecal carbon among samples collected during the three experiments; however, significant differences in faecal nitrogen content were detected in samples collected on the three different occasions. Leaching of faecal carbon and faecal nitrogen ranged between 4–14% and 9–16% of the original amount, respectively, after 2.5‐min immersion in sea water, although there was no further significant (P > 0.05) leaching after this time. No significant difference in nutrient leaching rate was found in faeces of fish fed HE and standard diets, and no significant differences in leaching rates were apparent among samples collected at different times of the year. These values suggest there may be an overestimation by dispersion models of the amount of nutrients entering seabed sediments. The amount of nutrients leaching from faeces may also have an important role in nutrient flux in the water column.     

Predicting feed digestibility from NIRS analysis of pig faeces

Digestibility is a key parameter in the evaluation of feeds; however, the measurements on animals require heavy experimental trials, which are hardly feasible when large numbers of determinations are required – for example, in genetic studies. This experiment aimed at investigating the possibility to predict digestibility from NIRS spectra measured on faeces. A total of 196 samples were available from a digestibility experiment investigating the effects of age and genetic background of Large White pigs fed the same diet, rich in fibre (NDF=21.4% DM). Digestibility of dry matter (dDM), organic matter (dOM), nitrogen content (dN), energy (dE) and apparent digestible energy content (ADE) were calculated, as well as total N content of faeces (N). The faeces samples were submitted to reflectance NIRS analysis after freeze-drying and grinding. Calibration errors and validation errors were, respectively, 0.08 and 0.13% DM for total N in faeces, 0.97% and 1.08% for dDM, 0.79% and 1.04% for dOM, 1.04% and 1.47% for dN, 0.87% and 1.12% for dE and 167 and 213 kJ/kg DM for ADE. These results indicate that NIRS can account for digestibility differences due to animal factors, with an acceptable accuracy. NIRS appears to be a promising tool for large-scale evaluations of digestibility. It could also be used for the study of digestibility of different feeds, after appropriate calibration based on a wide range of feed types.     

Stress physiological responses to tourist pressure in a wild population of European pine marten

The tourist pressure in natural parks is a potential source of stress and may cause an increase in the adrenal activity of wild populations of European pine marten (Martes martes). Seventy-six faecal samples were collected during 15 months in a natural park of Northwest Spain. Analysis of faecal DNA was used for the specific identification using the PCR-RFLPs technique. Faecal steroid determinations were performed by EIA. Natural park was divided in three areas: free entry, restricted area, and integral reservation, and number of daily human visitors recorded. Faecal glucocorticoid metabolite levels (ng/g dry faeces) were significantly higher in spring (56.36 ± 19.62) and summer (31.27 ± 11.98) compared to autumn (15.33 ± 6.89) and winter (11.13 ± 3.30). These data are closely related to daily number of visitors (spring: 3204, summer: 1672, winter: 646, autumn: 551). Androgen, progestin and oestrogen levels were also significantly higher in spring (reproductive season) showing values of 43.62 ± 18.6, 154.31 ± 53.50 and 829.62 ± 456.1, respectively. Glucocorticoid levels were significantly lower in integral reservation (15.95 ± 3.56) compared to restricted (31.4 ± 16.30) and free entry areas (41.59 ± 12.73), respectively. Wild populations of European pine marten showed stress physiological response induced by the tourist pressure and this response is higher during reproductive season.     

Occurrence and removal of parasites, enteric bacteria and faecal contamination indicators in wastewater natural reclamation systems in Tenerife-Canary Islands, Spain

Two wastewater natural reclamation systems (WWNRS) have been compared regarding their efficiencies on faecal bacteria removal and the persistence of enteric pathogens. These WWNRS are constituted of a combination of anaerobic treatment, small sub-surface flow constructed wetland refilled of volcanic ashes and a final pond as water reservoir. Faecal coliforms, enterococci, Escherichia coli, Clostridium perfringens, somatic coliphages, Salmonella sp., Campylobacter sp., Cryptosporidium sp., Giardia sp. and helminth eggs were analyzed in constructed wetlands inlet and outlet and storage pond effluent. Low numbers of protozoan positive samples (4.54% in Albergue de Bolico for both protozoa, and 19.05% in Carrizal Alto for Giardia sp.) and absence of helminth eggs were found. Both systems demonstrated efficient reduction of faecal contamination indicators in the wastewaters (removal rates values of 2 log₁₀). The natural systems for wastewater treatment used to be efficient in Salmonella abatement, this fact was confirmed in the reported systems, since enterobacteriaceae were found in only one of the effluents. Campylobacter species associated with the access of animals to storage ponds were detected in the reclaimed water.     

A comparative study of the apparent total tract digestibility of carbohydrates in Icelandic and Danish warmblood horses fed two different haylages and a concentrate consisting of sugar beet pulp and black oats

Four Icelandic (ICE) and four Danish Warmblood (DW) horses were used in a crossover study with two treatments to investigate the effect of breed and the effect of stage of maturity of haylage on the apparent total tract digestibility (ATTD) of a diet consisting of sugar beet pulp, black oats and haylage early or late cut. Fibre was analysed as crude fibre (CF), acid detergent fibre (ADF), neutral detergent fibre (NDF) and dietary fibre (DF = non-starch polysaccharides (NSP) plus lignin). In haylage all analysed fibre fractions increased with advancing stage of maturity, with the cell wall components cellulose, non-cellulosic residue, xylose and lignin causing this increase. Crude protein (CP) and sugars decreased with advancing stage of maturity. Feeding early cut haylage resulted in a significantly (p < 0.05) higher ATTD of dry matter (DM), organic matter (OM), energy, NDF, total NSP, DF and CP compared to feeding late cut haylage. There was a significantly (p < 0.05) higher ATTD of CF, DF and starch in ICE than in DW. Diet affected several faecal parameters with a significantly (p < 0.05) lower pH in faeces when horses were fed the early cut haylage. Concentrations of total short-chain fatty acids were significantly (p < 0.05) higher in faeces from horses fed early cut haylage, reflecting the higher fermentability (higher ATTD) of this diet. There was no marked effect of breed on faecal parameters. The DF analysis method gave the most appropriate differentiation of the fibre fractions and their digestibility, compared to the traditional CF, ADF and NDF analyses. A major advantage of the DF analysis is the capacity of recovering soluble fibres. The results suggested that ICE had higher ATTD of DF than DW, and this was caused by a tendency for a higher ATTD of cellulose, but further studies are required to verify that in general.     

FOOD HABITS OF WILDEBEEST, ZEBRA, HARTEBEEST AND CATTLE IN KENYA MASAILAND

A study was conducted of grass selectivity shown by four herbivores on open range lands of Kenya Masailand. At four seasons over one year, wildebeest, zebra and kongoni (Coke's hartebeest) were taken. Stomach materials and faeces were sampled from each animal. Faecal samples were collected from cattle that had been grazing in the same area. Simultaneously, vegetation availability assessments were made. A comparison of techniques for determining the food selectivity indicates that faecal and stomach-content analyses provide similar results when the diets are almost entirely grass. The selectivity exhibited by the four herbivores was determined by faecal analyses. Three grass species were preponderant in all diets as well as in the available menu. In comparing the selectivity shown for the three dominant grasses there is a high degree of similarity even though statistical differences are demonstrated. All animals favoured Themeda triandra over Pennisetum mezianum and Digitaria macroblephara. Kongoni displayed the highest degree of selectivity and cattle and zebra had the greatest similarity in diets. Each animal species had a wide spectrum of grasses in their diets: these contained a greater number of species during the drier seasons than during the rainy seasons. Wild animals had a greater diet variation between seasons than did cattle, the diet of the latter remaining much more consistent than the combination of available grasses.     

Fecal Nitrogen Concentration as a Nutritional Quality Indicator for European Rabbit Ecological Studies

Measuring the quality of the nutritional resources available to wild herbivores is critical to understanding trophic regulation processes. However, the direct assessment of dietary nutritional characteristics is usually difficult, which hampers monitoring nutritional constraints in natural populations. The feeding ecology of ruminant herbivores has been often assessed by analyzing fecal nitrogen (FN) concentrations, although this method has been less evaluated in other taxa. This study analyzed the suitability of FN as an indicator of ingesta quality in the European rabbit (Oryctolagus cuniculus), which is a keystone lagomorph species in Mediterranean ecosystems and of great conservation interest. Firstly, domestic O. cuniculus were used to evaluate under experimental conditions the accuracy of total FN and the metabolic FN as diet quality indicators of forages with characteristics similar to those available under natural conditions. Secondly, the accuracy of Near-Infrared Spectroscopy (NIRS) to calculate FN was tested using partial least squares regression. Thirdly, a pilot field study was conducted to monitor FN dynamics from wild O. cuniculus in three different habitats during wet and drought periods. A strong association was found between diet type and total FN and metabolic FN (Pseudo-R² ≥ 0.89). It was also found that NIRS calibrations were accurate for depicting nitrogen concentrations (R² > 0.98 between NIRS and chemical results). Finally, the seasonal FN dynamics measured in the field were consistent with current knowledge on vegetation dynamics and forage limitations in the three habitats. The results support the use of NIRS methods and FN indices as a reliable and affordable approach to monitoring the nutritional quality of rabbit habitats. Potential applications include the assessment of the mechanistic relationships between resource limitations and population abundance, e.g., in relation to natural drought cycles and to habitat interventions aimed at reinforcing rabbit populations.     

Faecal indices predict organic matter digestibility, short chain fatty acid production and metabolizable energy content of browse-containing sheep diets

The ability of faecal composition to accurately predict nutritional characteristics of browse-containing sheep diets was investigated. Predictive regression models were developed using data derived from three feeding experiments conducted with Acacia saligna (i.e., Avena sativa control and five inclusion levels of A. saligna), Chamaecytisus palmensis (i.e., A. sativa control and five inclusion levels) and Atriplex amnicola (i.e., A. sativa control and five inclusion levels). The fourth experiment conducted to validate the predictive models included six levels of A. saligna and five levels of C. palmensis. Feed and faecal samples collected from six replicate sheep were analysed for neutral detergent fiber (NDFom), acid detergent fiber (ADFom), lignin(sa), ash and crude protein (CP) contents. Total phenolics (TP) and tannin (TT) contents and in vitro gas production of the feed samples were also measured. Organic matter digestibility (OMD), short chain fatty acid production (SCFA) and metabolizable energy (ME) content of diets were determined. Feed and faecal data of experiments 1, 2 and 3 were pooled. Correlation coefficients among feed and faecal variables were estimated. The predictive regression models of dietary characteristics were developed from faecal composition by a stepwise regression procedure. The significant (i.e., P<0.05) predictive model with the highest R² and lowest residual standard deviation (RSD) was selected (i.e., best-fit predictive model). The model was used to predict nutritional characteristics of diets in the validation experiment from respective faecal indices. The predicted nutritional characteristics were then regressed against measured nutritional characteristics. The best-fit predictive regression model for dietary CP had a very low R² (0.21). The best-fit regression models predicting dietary TP, TT, OMD, SCFA and ME from faecal N, ash and lignin(sa)/NDFom had R² greater than 0.78 and low RSD. In the validation experiment, regressions between measured and predicted TP and TT had positive intercepts (P<0.05) and low R². Slopes of these regressions were much lower than 1.0. Intercepts of the regressions between measured and predicted OMD, SCFA and ME did not different from zero. The R² of these regressions were very high and slopes were close to 1. Dietary CP content of browse-containing diets cannot be predicted from faecal fiber, lignin(sa) and ash contents. However, these faecal indices collectively can predict the OMD, SCFA production and ME contents of browse-containing diets, and these predictive models have broad application. Further research is necessary to understand the poor validity of the predictive models of TP and TT.     

变性梯度凝胶电泳法研究断奶仔猪粪样细菌区系变化

利用PCR和DGGE技术分析了12头仔猪在断奶后其粪样细菌区系的变化。粪样细菌16S rDNA的V6～V8可变区经PCR扩增,扩增产物经DGGE电泳后再进行相似性分析。结果表明,仔猪断奶当天粪样 DGGE谱带少,同窝仔猪间图谱相似。断奶后,随着断奶时间的推移,每头仔猪的DGGE图谱带逐渐增多,变得复杂和多样,仔猪个体间DGGE图谱差异逐渐增大。仔猪是否同窝以及所采食日粮类型对DGGE图谱没有明显影响。相似性分析还表明,日粮中添加寡果糖的仔猪在断奶后第1周,其粪样微生物区系变化迅速,而后缓慢。     

Variation in faecal digestibility values related to feed efficiency traits of grower-finisher pigs

Providing pigs a diet that matches their nutrient requirements involves optimizing the diet based on the nutrient digestibility values of the considered feed ingredients. Feeding the same quantity of a diet to pigs with similar BW but with different requirements, however, can result in a different average daily gain (ADG) and backfat thickness (BF) between pigs. Digestibility may contribute to this variation in efficiency. We investigated variation in feed efficiency traits in grower-finisher pigs associated with variation in faecal digestibility values, independent of feed intake at the time of measuring faecal digestibility. Considered traits were ADG, average daily feed intake (ADFI), feed conversion ratio (FCR), BF and residual feed intake (RFI). Feed intake, BW, and BF data of one hundred and sixty three-way crossbreed grower-finisher pigs (eighty female and eighty male) were collected during two phases, from day 0 of the experiment (mean BW 23 kg) till day 56 (mean BW 70 kg) and from day 56 to slaughter (mean BW 121 kg). Pigs were either fed a diet based on corn/soybean meal or a more fibrous diet based on wheat/barley/by-products, with titanium dioxide as indigestible marker. Faecal samples of one hundred and five pigs were collected on the day before slaughter and used to determine apparent faecal digestibility of DM, ash, organic matter (OM), CP, crude fat (CFat), crude fibre (CF), and to calculate the digestibility of nonstarch polysaccharides (NSPs) and energy (E). The effects of diet, sex and covariate feed intake at sampling (FIs) on faecal digestibility values were estimated and were significant for all except for CFat. Faecal digestibility values of each individual pig determined at the day before slaughter, corrected for diet, sex and FIs, were used to estimate their association with ADG, ADFI, FCR, BF, and RFI. In the first phase, a one percent unit increase in faecal digestibility of DM, ash, OM, E, CP, CFat, CF, NSP, and Ash individually was related to 0.01–0.03 unit reduction in FCR and 6–23 g/day reduction in RFI. A unit increase in CP digestibility was related to 0.1 mm increase in BF and 10 g/day increase in ADG. In the second phase, a one percent unit increase in faecal digestibility of DM, CP and Ash was related to a decrease of 16–20 g/day in RFI. In conclusion, the relationship between variation in feed efficiency traits and faecal digestibility values is different across the developmental stages of a pig.