The crystal and molecular structure of tri-o-ethylamylose (tea 3)

The crystal and molecular structure of a tri-O-ethylamylose polymorph, TEA 3, has been solved by stereochemical conformation and packing analysis, combined with X-ray fibre diffraction analysis. The unit cell is orthorhombic, space group P2₁2₁2₁, with a  15.36 (±0.03) Å, b  12.18 (±0.05) Å, and c (fibre repeat)  15.48 (±0.01) Å. The actual chain conformation is a 4₃ helix with the EtO-6 group in the tg position, as was found in the polymorph TEA 1.     

X-ray crystal structure and antimony-121 Mössbauer spectrum of catecholato bis(1,10-phenanthroline)antimony(III) tetraphenylborate

The crystal structure of the title compound was solved by means of X-ray diffraction at room temperature. The salt consists of a tetrahedral tetraphenylborate anion and a complex cation containing a catecholatoantimony(III) unit chelated by two 1,10-phenanthrolines. The three bidentate ligands are essentially arranged in one half of the Sb coordination sphere, leaving ample space to accomodate the lone pair of electrons. The Mössbauer parameters of the title compound and of the complex (C₆H₄O₂)SbF·Phen were measured and their rationalization accomplished in the light of their respective molecular structures.     

Chelating and bridging bis(diphenylphosphino)aniline complexes of copper(I)

The ligand bis(diphenylphosphino)aniline (dppan) has been shown to be a versatile ligand sporting different coordination modes and geometries as dictated by copper(I) and the counter ion. The molecular structures of its Cu(I) complexes were characterized by X-ray crystallography. The ligand was found in a chelating mode and monomeric complexes were formed when the ligand to copper ratio was 2:1 and the anion was non-coordinating. However, with thiocyanate as the counter anion, the ligand was found to adopt two different modes, with one ligand chelating and the other acting as a monodentate ligand. With CuX (X = Cl, Br), dppan formed a tetrameric complex when the ligand and metal were reacted in the ratio of 1:1. But reactions containing ligand and metal in the ratios of 1:2 or 2:1, resulted in the formation of a mixture of species in solution. Crystallization however, led to the isolation of the tetrameric complex. Variable temperature ³¹P{¹H} NMR spectra of the isolated tetramers did not show the presence of chelated structures in solution. Tetra-alkylammonium salts were added to solutions of various complexes of dppan and studied by ³¹P{¹H} NMR to probe the effect of anions on the stability of complexes in solution. The Cu-dppan complexes were robust and did not interconvert with other structures in solution unlike the bis(diphenylphosphino)isopropylamine complexes.     

A Mesorhizobium lipopolysaccharide (LPS) specific lectin (CRL) from the roots of nodulating host plant, Cicer arietinum

A 30 kDa rabbit erythrocyte agglutinating glycoprotein isolated and characterized from the roots of Cicer arietinum and designated as cicer root lectin (CRL). Hemagglutination activity of CRL is strongly inhibited by cell surface LPS of nodulating cicer specific Rhizobium. CRL agglutinates mesorhizobial cells and not Escherichia coli or yeast cells. It binds to immobilized LPS of cicer specific Rhizobium only. The primary structure of CRL as predicted by peptide mass fingerprinting by MALDI-TOF (matrix-assisted laser desorption/ionization-time of flight) indicated ∼54% amino acid sequence homology with C. arietinum seedling lectin (Accession no. gi/3204123) and ∼26% with C. arietinum (Accession no. gi/110611256), and Pisum sativum (Accession nos. gi/230612, gi/6729956, gi/126148) lectins. These suggested CRL to be a member of vegetative tissue lectin. Circular dichroism analysis indicated that the secondary structure of CRL consists of 48% β-sheets, 26% random coils, and 11% α-helix. CRL has six isoforms of closely associated molecular mass with differential acidic pI of 5.30, 5.20, 5.15, 5.05, 5.00, 4.80. Identity of these isoforms was confirmed from their binding with cicer specific Rhizobium LPS. All the isoforms of CRL are differentially glycosylated as identified by deglycosylation and monosaccharide analysis using high-performance anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD). All these results suggest that unlike other plant lectins CRL is a LPS-binding lectin.     

Syntheses and characterization of novel binuclear chromium (III) complexes of 1,4,8,11-tetraazacyclotetradecane (cyclam)

The syntheses and characterization of novel binuclear chromium (III) complexes of 1,4,8,11-tetraazacyclotetradecane (cyclam) are described. The complex [(cyclam)Cr(OH)]₂Cl₄ · 7H₂O (1) crystallizes in the monoclinic space group C2/c with four binuclear formula units in a cell of dimensions a = 17.403 (2), b = 16.803 (3), c = 12.708 (2) Å, and β = 100.83 (1)°. The cation in 1 consists of di-μ-hydroxodichromium (III) units. The bridging OH groups lie on a twofold axis, which relates one end of the dimer to the other and gives rise to a rigorously planar Cr₂O₂ bridging unit. The Cr?Cr separation is 3.122 (1) Å and the average bridging Cr-O-Cr angle is 104.6 (4)°. The complex [(cyclam)Cr(SO₄)]₂ (ClO₄) · H₂O (5) crystallizes in the monoclinic space group P2₁/c with two binuclear formula units in a cell of dimensions a = 9.516 (2), b = 13.263 (3), c = 14.870 (3) Å, and β = 104.08 (3)°. This cation consists of bis-μ-sulfato-di-chromium (III) units, in which the two chromium centers are bridged by two bridging sulfate groups leading to an eight-membered {Cr-O-S-O}₂ bridging framework. Both dimers exhibit antiferromagnetic interactions, with J = 27.7 cm⁻¹ for complex 1 and J = 4.7 cm⁻¹ for complex 5. The EPR spectrum of the complex 1 has been simulated, demonstrating that the spectrum almost entirely originates from the quintet state, while a few lines can be attributed as triplet and septet transitions.     

The crystal and molecular structure of diethylenetriammonium hexachloro-antimonate(III)

A compound of the type [DenH₃]SbCl₆ (DenH₃ = diethylenetriammonium cation) was prepared and characterized by means of structural and vibrational measurements. The structure consists of monomeric SbCl₆^3? anions and triprotonated diethylenetriam-monium cations. The SbCl₆^3? anion has a strongly distorted octahedral geometry, presenting three short (2.415–2.495 Å) and three long (2.836–3.114 Å) SbCl bonds. The presence of multiple hydrogen bonds, mainly involving the counterion and the three long-bonded chlorine atoms, is considered to be responsible for the octahedral distortion. Vibrational properties of the complex are discussed in the light of its known crystal structure.     

Insecticidal Toxic Proteins Produced by Photorhabdus luminescens akhurstii,a Symbiont of Heterorhabditis indica

We describe the isolation and characterization of an insect pathogenic bacterium from the entomopathogenic nematode Heterorhabditis indica (Karnataka strain), an isolate from the southern regions of India. The strain has been identified and characterized by phenotypic, biochemical tests and PCR-RFLP analysis of the 16S rRNA gene as Photorhabdus luminescens subsp. akhurstii. The insecticidal toxin complex produced by this bacterium has been purified through a series of steps including ultrafiltration, anion exchange chromatography, and gel filtration chromatography. The toxin consists of two protein complexes of approximately 1,000 kD and was active against the larvae of Spodoptera litura and Galleria mellonella.     

The preparation and electrochemistry of cysteine-ester oxovanadium(IV) complexes

An improved synthesis of VO(CysOCH₃)₂, (CysOCH₃  the anion of cysteine methyl ester), is reported, as is an analogous preparation of VO(CysOCH₂CH₃)₂, (CysOCH₂CH₃  the anion of cysteine ethyl ester). These are the first two examples of isolated vanadium-cysteine compounds. The oxidation of VO(CysOCH₃)₂ in DMSO is a reversible one electron change at 0.24 V versus SCE followed by a rapid chemical reaction which produces a stable vanadium(V) species. This species is reduced back to the vanadium(IV) complex at −1.30 V. The electrochemistry of VO(Cys-OCH₂CH₃)₂ is nearly identical to that of the methyl ester compound.     

Synthesis and crystal structure of a tetranuclear five-coordinated copper(II) complex with Schiff-base of N-(3-carboxylsalicylidene)-4-(2-iminoethyl)-morpholine

A tetranuclear copper(II) complex [Cu₄L₂(CH₃COO)₂(OH)₂]·6H₂O, in which L stands for the dianion of N-(3-carboxylsalicylidene)-4-(2-iminoethyl)morpholine, was synthesized and characterized by elemental analysis, IR, UV-Vis, TGA and X-ray single crystal diffraction. The crystal structure shows that the coordination unit is centrosymmetric with all the Cu(II) ions in square pyramidal coordination geometry. The coordination unit consists of two equivalent parts [Cu₂L(CH₃COO)(OH)], each containing two Cu(II) ions, a tetradentate N₂O₂ Schiff base dianion L²⁻, a CH₃COO⁻, and a OH⁻ anion. In [Cu₂L(CH₃COO)(OH)], the six coordination atoms (N₂O₄) are nearly coplanar, with Cu(1) and Cu(2) enchased in between; the phenolate oxygen and the OH⁻ oxygen as bridging atoms bind the two Cu(II) ions in close proximity; both O₄ around Cu(1) and N₂O₂ around Cu(2) form the basal plane of the coordination square pyramids. The two parts are connected by sharing two μ₃-OH⁻ oxygens and two μ₂-CH₃COO⁻ oxygens from each other, forming four edge-sharing coordination square pyramids around the four Cu(II) ions. A 3D network is formed through hydrogen bonding along a and c axis, and π-π interaction along b axis.     

Precibarial and cibarial chemosensilla in the whitefly,Bemisia tabaci (Gennadius) (Homoptera: Aleyrodidae)

The internal anatomy of the anterior alimentary canal of the whitefly, Bemisia tabaci (Gennadius) (Homoptera: Aleyrodidae) B-biotype, was examined by light, scanning, and transmission electron microscopy to elucidate the location and number of precibarial and cibarial gustatory sensilla. Elucidation of the epipharyngeal organ complex within the precibarium revealed 10 precibarial sensilla located proximal to where the paired maxillary stylets diverge on their retraction. The sensory organ complex within the cibarium consists of 8 sensilla, 6 on the epipharyngeal sclerite with 2 found within the hypopharyngeal sclerite. Fine structure investigation revealed the individual neurons to terminate at sensillar pores, which allow direct contact with passing fluids, thus supporting a chemosensory function. Ultrastructure of the neurons is similar to that of precibarial and cibarial gustatory chemosensilla found in other piercing-sucking insects. Their importance to whitefly feeding is discussed.     

The Spt-Ada-Gcn5 Acetyltransferase (SAGA) Complex in Aspergillus nidulans

A mutation screen in Aspergillus nidulans uncovered mutations in the acdX gene that led to altered repression by acetate, but not by glucose. AcdX of A. nidulans is highly conserved with Spt8p of Saccharomyces cerevisiae, and since Spt8p is a component of the Spt-Ada-Gcn5 Acetyltransferase (SAGA) complex, the SAGA complex may have a role in acetate repression in A. nidulans. We used a bioinformatic approach to identify genes encoding most members of the SAGA complex in A. nidulans, and a proteomic analysis to confirm that most protein components identified indeed exist as a complex in A. nidulans. No apparent compositional differences were detected in mycelia cultured in acetate compared to glucose medium. The methods used revealed apparent differences between Yeast and A. nidulans in the deubiquitination (DUB) module of the complex, which in S. cerevisiae consists of Sgf11p, Sus1p, and Ubp8p. Although a convincing homologue of S. cerevisiae Ubp8p was identified in the A. nidulans genome, there were no apparent homologues for Sus1p and Sgf11p. In addition, when the SAGA complex was purified from A. nidulans, members of the DUB module were not co-purified with the complex, indicating that functional homologues of Sus1p and Sgf11p were not part of the complex. Thus, deubiquitination of H2B-Ub in stress conditions is likely to be regulated differently in A. nidulans compared to S. cerevisiae.     

A new polymorph of dichlorido(1,10-phenanthroline)platinum(II)

A yet unreported polymorph of [PtCl₂(1,10-phenanthroline)] was obtained by slow decomposition, in CH₂Cl₂ solution, of [Pt{CH₂CH₂N(CH₂CH₃)₂-κC,κN}(1,10-phenanthroline)](ClO₄). The structure of the new orthorhombic form, III, (space group Pna2₁), is described and compared to those of the two already reported forms, I and II, which are monoclinic (space group P2₁/c) and orthorhombic (space group Pca2₁), respectively [21]. Polymorph III appears to be the least stable of the three.     

Synthesis and characterization of square planar nickel(II) complexes with p-fluorobenzaldehyde thiosemicarbazone derivatives

New thiosemicarbazone nickel complexes (1–7), derived from p-fluorobenzaldehyde and differently substituted thiosemicarbazides, were synthetized and characterized by means of NMR and IR techniques. The p-fluorobenzaldehyde 4-ethylthiosemicarbazone Et-Hfbt (1) and its complex [Ni(Et-fbt)₂] (2) were also characterized by X-ray diffractometry. Molecule 1 consists of two units: the p-fluorobenzaldehyde residue and the thiosemicarbazonic chain. In the reaction of 1 with NiAc₂·4H₂O, complex 2 was afforded. The molecular structure of 2 consists of the neutral complexes [Ni(Et-fbt)₂] with the metal not lying on a symmetry centre, with two consequently independent ligand molecules; the coordination results in a square planar geometry slightly twisted towards a tetrahedron, involving the sulfur and the hydrazine nitrogen atoms of the two ligands in a trans configuration.     

Synthesis of 2-(nitromethyl)ornithine from ornithine mediated by cobalt(III)

Rac.-p-(tris(2-aminoethyl)amine-2-(nitromethyl)ornithine)cobalt(III) trichloride (2d) was obtained by a simple three-step procedure from ornithine using cobalt template chemistry. p-(Tris(2-aminoethyl)amine-ornithine)cobalt(III) trichloride (2a) was obtained from tris(2-aminoethyl)amine (tren) and (S)-ornithine in the presence of cobalt(II), which was oxidised to cobalt(III) during the reaction. Complex 2a was selectively oxidised with thionyl chloride-dimethyl formamide to p-(tris(2-aminoethyl)amine-dehydro-ornithine)cobalt(III) trichloride 2b. Complex 2c, in which reaction of thionyl chloride-dimethyl formamide has also occurred at the δ-amine of ornithine, was obtained at longer reaction times. Complex 2b reacted with nitromethane anion to give rac.-p-(tris(2-aminoethyl)amino-2-(nitromethyl)ornithine)cobalt(III) trichloride (2d). The amino acid rac.-2-(nitromethyl)ornithine (1b) was released by reducing complex 2d with aqueous ammonium sulfide. Complex 2d was expected to release 2-(nitromethyl)ornithine (1b) in hypoxic cells, where the amino acid could act as an inhibitor of ornithine decarboxylase. Preliminary data indicated that complex 2d was weakly cytotoxic in one cell type studied.     

Cytotoxic palladium(II) complexes of 8-aminoquinoline derivatives and the interaction with human serum albumin

Palladium(II) complexes are potential antitumor metallodrugs for their chemical resemblance to platinum(II) complexes. Two palladium(II) complexes (1 and 2) in the formula of [PdLⁿCl] [L¹ = N-(tert-butoxycarbonyl)-l-methionine-N′-8-quinolylamide, L² = L-alanine-N′-8-quinolylamide] have been synthesized accordingly. The structures of the complexes were fully characterized by X-ray crystallography. The palladium(II) center in 1 is coordinated by two N atoms and an S atom from L¹ with one chloride anion as the leaving group; while that in 2 is coordinated by three N atoms from L² with one chloride anion as the leaving group. The interaction between complex 1 and human serum albumin (HSA) has been investigated using fluorescence and circular dichroism spectroscopies. The complex seems to react with HSA chiefly through hydrophobic and electrostatic interactions, and it does not alter the α-helical nature of HSA. The cytotoxicity of these complexes has been tested against the human cervical cancer (HeLa), human mammary cancer (MCF-7), and human lung cancer (A-549) cell lines. Complex 1 displays a cytotoxic activity comparable to that of cisplatin, but complex 2 is less active than cisplatin.     

Salts of cationic platinum dithiolenes with anionic platinum complexes: structural characterization of [Pt(Me2pipdt)2][Pt(SCN)4] (Me2pipdt = N,N-dimethyl-piperazine-2,3-dithione)

[Pt(Me₂pipdt)₂](BF₄)₂ salts [Me₂pipdt = N,N^′-dimethyl-piperazine-2,3-dithione] bearing cationic dithiolene complexes react with (Bu₄N)₂[Pt(X)₄] (X = SCN, CN) to form [Pt(Me₂pipdt)₂][Pt(SCN)₄ ] (1) and [Pt(Me₂pipdt)₂][Pt(CN)₄] (2) salts by metathesis. Black crystals of 1 have been structurally characterized showing that the two metals lie on inversion centers and exhibit a square planar coordination. The Pt-S bond distances in the anion complex (2.324(2) Å) are longer than in the cation complex (2.280(2) Å) whereas the C-S bond distances are shorter in SCN⁻ (average 1.669 Å) than in Me₂pipdt (average 1.694 Å). The chelating Me₂Pipdt ligand is found disordered in the λ/δ conformations with site occupancies of 50/50, respectively. The cation and anion complexes run parallel to a.     

ZYGOTE FORMATION IN ASCARIS LUMBRICOIDES (NEMATODA)

Ultrastructural observations of the in utero sperm of Ascaris lumbricoides reveal that it consists of a relatively clear, ameboid anterior region and a conical posterior region containing numerous surface membrane specializations, dense mitochondria, a lipid-like refringent body of variable size, and a dense nucleus which lacks an apparent nuclear envelope. No acrosomal complex was observed. Pseudopods emanating from the anterior cytoplasm make first contact with the primary oocytes and appear to be responsible for the localized removal of the extraneous coat covering the oolemma. Subsequently the gamete membranes interdigitate and finally fuse. Because this pseudopodial action appears similar to that reported for the acrosomal filaments in flagellated sperm, the anterior region of the Ascaris sperm is thought to serve an acrosomal function. Following gamete-membrane fusion, the sperm nucleus acquires a particulate appearance and becomes disorganized. Once inside the oocyte, the sperm cytoplasm consists of dense mitochondria, ribosomes, and vesicles derived from the surface membrane specializations. The refringent body, whose contents possibly contribute to the synthesis of ribosomes, is usually absent by the time the sperm cytoplasm attains a central position in the egg.     

Preparation,structure and properties of dicyano silver complexes of the M(en)3Ag2(CN)4 and M(en)2Ag2(CN)4 type

Complexes of the M(en)₃Ag₂(CN)₄ (M = Ni, Zn, Cd) and M(en)₂Ag₂(CN)₄ (M = Ni, Cu, Zn, Cd) type were prepared and identified by elemental analysis, infrared spectroscopy, measurement of magnetic susceptibility, and X-ray powder diffractometry. The crystal structures of Ni(en)₃Ag₂(CN)₄ (I) and Zn(en)₂Ag₂(CN)₄ (II) were determined by the method of monocrystal structure analysis. Complex I crystallizes in the space group C2/c, a = 1.2639(5), b = 1.3739(4), c = 1.2494(4) nm, β = 113.25(4)°, D_m = 1.86(1), D_c = 1.86 gcm⁻³ Z = 4, R = 0.0429. The crystal structure of I consists of complex cations [Ni(en)₃]²⁺ and complex anions [Ag(CN)₂]⁻. Complex II crystallizes in the space group I2/m, a = 0.9150(3), b = 1.3308(4), c = 0.6442(2) nm, β = 95.80(3)°, D_m = 2.14(1), D_c = 2.15 gcm⁻³, Z = 2, R = 0.0334. Its crystal structure consists of infinite, positively charged chains of the [-NCAgCNZn- (en)₂]_nⁿ⁺ type and isolated [Ag(CN)₂]⁻ anions. The atoms of Ag are positioned parallely to the z axis and the AgAg distance is equal to 0.3221(2) nm.