Molecular characterization of Cryptosporidium sp. isolated from northern Alaskan caribou (Rangifer tarandus)

Cryptosporidium sp. was found in 3 out of 49 caribou (Rangifer tarandus) from northern Alaska. Segments of both the 18S ribosomal RNA and the heat shock protein genes were amplified from the caribou isolate and compared with that obtained from an isolate from a wild white-tailed deer (Odocoileus virginianus) in Virginia as well as other species and isolates available from GenBank. Analyses showed the white-tailed deer isolate to be identical with the C. parvum cattle genotype; however, the caribou isolate represents a new genotype closely related to C. serpentis, C. muris, and C. andersoni. Giardia sp. was not detected in any of the caribou samples nor was Cryptosporidium sp. or Giardia sp. detected in any of the 42 moose (Alces alces) samples examined.     

Brucella suis biotype 4: a case of granulomatous nephritis in a barren ground caribou (Rangifer tarandus groenlandicus L.) with a review of the distribution of rangiferine brucellosis in Canada

Severe granulomatous nephritis caused by Brucella suis biotype 4 was found in a barren ground caribou (Rangifer tarandus groenlandicus) from Northwest Territories, Canada. A review of the distribution of human and animal cases of brucellosis in northern Canada indicated that B. suis biotype 4 is distributed widely and is probably enzootic in most Canadian caribou herds.     

Snow depth does not affect recruitment in a low-density population of boreal woodland caribou (<Emphasis Type="Italic">Rangifer tarandus caribou</Emphasis>)

Winter snow depth may be an important driver of annual variability in recruitment of ungulate calves, and low calf recruitment has been implicated as a factor in declining boreal caribou (Rangifer tarandus caribou) populations. We used 11 consecutive years (2006–2016) of aerial survey data to document calf recruitment in a low-density population of boreal woodland caribou in the Northwest Territories, Canada. We measured snow depth in winter and tested two hypotheses: (1) that calf recruitment was lower in winters with greater snow depth and (2) that calf recruitment was lower following winters with greater snow depth (1-year time lag). Recruitment, the number of calves/adult female in March, ranged twofold from 0.23 to 0.45, and snow depth also ranged twofold from 41 to 85 cm. Yet, we found no support for the hypothesis that late-winter snow depth in the current or previous year was inversely related to calf recruitment.     

Diseases and parasites in wolves of the Riding Mountain National Park region, Manitoba, Canada

We examined wolf (Canis lupus) blood and fecal samples from the Riding Mountain National Park (RMNP) region of Manitoba, Canada. In 601 fecal samples collected during two study periods in RMNP and the Duck Mountain Provincial Park and Forest (DMPPF) we found gastrointestinal helminth eggs from Alaria sp. (15.5%), Capillaria sp. (1.0%), taeniid tapeworms (30.8%), Toxascaris sp. (1.7%), Toxocara sp. (0.2%), Trichuris sp. (2.2%), and Moniezia sp. (0.5%). In addition, we found Demodex sp. (0.2%) and the protozoal cysts/oocysts of Sarcocystis sp. (37.3%), Cryptosporidium sp. (1.2%), coccidia (Isospora sp. or Eimeria sp.) (1.7%), and Giardia sp. (29.5%). No fecal shedding of canine parvovirus (CPV, n=387) was detected. All 18 blood samples collected in RMNP showed CPV exposure and eight of 18 blood samples indicated canine distemper virus (CDV) exposure. One wolf died from CDV. Our results are consistent with previous findings on pathogens affecting wolves and with high Giardia sp. prevalence in wolves inhabiting agricultural regions.     

Prevalence of Toxoplasma gondii antibodies in barren-ground caribou (Rangifer tarandus groenlandicus) from the Canadian Arctic

Prevalence of antibodies to Toxoplasma gondii was determined in 147 barren-ground caribou (Rangifer tarandus groenlandicus) from 5 herds in the Northwest Territories and Nunavut, northern Canada, by the modified agglutination test (MAT). In the mainland herds (Bluenose, Bathurst, and Beverly), antibodies were found in 43 (37%) of 117 caribou, and MAT titers were 1:25 in 10, 1:50 in 24, and 1:500 in 9. In the island herds, only 1 (4.3%) of 23 animals sampled from the North Baffin Island herd was positive (titer = 1:25) and no antibodies were detected in 7 caribou from the Dolphin and Union herd. The high prevalence of antibodies to T. gondii in the mainland caribou herds indicates that caribou meat may contain viable T. gondii.     

Cryptosporidium,Giardia, and Cyclospora in ancient Peruvians

Twenty-two coprolites of human origin, collected from excavations along the north-central coast of Peru, were examined using fluorescent microscopy for the presence of fecal parasites, with emphasis on Cryptosporidium sp., Giardia sp., and Cyclospora sp. Three samples were positive. One coprolite dated between ca. 2,375 and 1,525 BC contained Giardia sp. cysts. This coprolite corresponded to the Peruvian preceramic period. Another positive coprolite ca. AD 770-830 corresponded to Epoch 3 of the Middle Horizon and contained Cryptosporidium sp. oocysts. The third positive coprolite (corresponding to the Middle Horizon. ca. AD 500-900) contained Giardia sp. cysts. This report demonstrates that Giardia sp. and Cryptosporidium sp. were present in Peruvian coastal populations for at least 4,300 and 1,100 BP.     

Barren‐ground caribou (Rangifer tarandus groenlandicus) behaviour after recent fire events; integrating caribou telemetry data with Landsat fire detection techniques

Fire regimes are changing throughout the North American boreal forest in complex ways. Fire is also a major factor governing access to high‐quality forage such as terricholous lichens for barren‐ground caribou (Rangifer tarandus groenlandicus). Additionally, fire alters forest structure which can affect barren‐ground caribou's ability to navigate in a landscape. Here, we characterize how the size and severity of fires are changing across five barren‐ground caribou herd ranges in the Northwest Territories and Nunavut, Canada. Additionally, we demonstrate how time since fire, fire severity, and season result in complex changes in caribou behavioural metrics estimated using telemetry data. Fire disturbances were identified using novel gap‐free Landsat surface reflectance composites from 1985 to 2011 across all herd ranges. Burn severity was estimated using the differenced normalized burn ratio. Annual area burned and burn severity were assessed through time for each herd and related to two behavioural metrics: velocity and relative turning angle. Neither annual area burned nor burn severity displayed any temporal trend within the study period. However, certain herds, such as the Ahiak/Beverly, have more exposure to fire than other herds (i.e. Cape Bathurst had a maximum forested area burned of less than 4 km²). Time since fire and burn severity both significantly affected velocity and relative turning angles. During fall, winter, and spring, fire virtually eliminated foraging‐focused behaviour for all 26 years of analysis while more severe fires resulted in a marked increase in movement‐focused behaviour compared to unburnt patches. Between seasons, caribou used burned areas as early as 1‐year postfire, demonstrating complex, nonlinear reactions to time since fire, fire severity, and season. In all cases, increases in movement‐focused behaviour were detected postfire. We conclude that changes in caribou behaviour immediately postfire are primarily driven by changes in forest structure rather than changes in terricholous lichen availability.     

Demographic responses of boreal caribou to cumulative disturbances highlight elasticity of range-specific tolerance thresholds

Conserving species-at-risk requires quantifiable knowledge of the key drivers of population change. Non-linear demographic responses to habitat loss have been documented for many species and may serve to establish quantitative habitat thresholds for management purposes. In Canada, boreal populations of woodland caribou are considered threatened; Environment Canada’s empirical model of calf recruitment–range disturbance suggests that at least 65% undisturbed habitat is required to ensure viability. We tested the relationship upon which this conservation guideline is based by pairing demographic estimates with range conditions over a 10-year period for three boreal caribou populations. Our objectives were (1) to evaluate evidence of intra-population demographic responses to fluctuations in range quality over time; (2) to evaluate inter-population differences in demographic responses to cumulative range disturbances; and (3) to evaluate the sensitivity of disturbance tolerance thresholds to variation in local population demography. We found strong evidence in support of the disturbance–recruitment relationship for within-population responses over time (R² = 0.77). Mixed effects logistic regression modeling revealed variations in local population responses to cumulative habitat depletion. Range-specific disturbance thresholds derived from Monte Carlo simulations were highly elastic in response to observed variation in local population demography, suggesting that 65% undisturbed habitat is insufficient when adult female survival and/or sex ratio is suboptimal. Study populations were determined to be not self-sustaining (Pr(λ ≥ 0.99) = 37–47%). Adult survival was comparable to estimates reported elsewhere despite Aboriginal harvesting for subsistence purposes. Results underscored potential trade-offs between forest harvesting and wildlife habitat conservation. Protection and restoration of sufficient quantities of undisturbed habitat, particularly via road reclamation, is essential for caribou population recovery.     

Herpesvirus infection in woodland caribou in Alberta, Canada

Sera and genital swabs collected from 121 adult woodland caribou (Rangifer tarandus caribou) in five subpopulations in northern Alberta, Canada, between December 1997 and October 1999, were examined for evidence of infection with herpesviruses or pestiviruses. No virus was isolated from sera or swabs, and no antibodies against bovine viral diarrhea virus were detected. However, 63 (52%) of the 121 animals had neutralizing antibody titers against bovine herpesvirus 1. There was sufficient serum from 37 of the 121 caribou to allow parallel testing for antibodies against a new alphaherpesvirus isolated from an elk (Cervus elaphus nelsoni), and 20 animals had antibodies against this virus. Paired sera collected 11 mo apart from 14 caribou showed seroconversion in seven animals, indicating that an active herpesvirus infection was present. Virus neutralization data suggest that these caribou are infected with a distinct alphaherpesvirus.     

Changing northern vegetation conditions are influencing barren ground caribou (Rangifer tarandus groenlandicus) post‐calving movement rates

Aim

To quantify changes in vegetation productivity over the past three decades across five barren ground caribou (Rangifer tarandus groenlandicus) herd ranges and assess how these changes are influencing caribou movement rates.

Location

Northwest Territories and Nunavut, Canada.

Methods

As an indicator of vegetation productivity, the enhanced vegetation index (EVI) was calculated on newly developed cloud‐free, gap‐free, Landsat surface reflectance image composites representing 1984–2012. Changes in EVI were assessed on a pixel basis using Theil‐Sen's nonparametric regression and compared across herd ranges and land cover types using generalized least squares regression. Animal movement velocity was calculated from caribou telemetry data and generalized additive mixed models were used to link movement rates with vegetation productivity during the post‐calving phase of the year (July and August).

Results

Vegetation productivity increased across the five caribou herd ranges examined. The largest productivity increase occurred over the ranges of the most western herds, with the largest observed changes in grassland or shrub habitats. Caribou tended to move more slowly through tundra habitats with elevated levels of productivity to a point, while grasslands movement rates decreased linearly with increasing productivity. Movement velocities peaked at intermediate productivity levels in shrub habitats.

Main conclusions

Over the three decades of collected data, barren ground caribou habitats have become more productive, which is consistent with other studies that have documented increases in Arctic vegetation productivity. The more western herds, whose ranges are also closest to the Arctic Ocean, experienced the largest increases in productivity. Finally, we demonstrate that barren ground caribou movement patterns will likely change as a result of changing vegetation productivity in complex manners depending on herd, habitat type and the magnitude of change in vegetation productivity.     

Spatial differences in genetic diversity and northward migration suggest genetic erosion along the boreal caribou southern range limit and continued range retraction

With increasing human activities and associated landscape changes, distributions of terrestrial mammals become fragmented. These changes in distribution are often associated with reduced population sizes and loss of genetic connectivity and diversity (i.e., genetic erosion) which may further diminish a species' ability to respond to changing environmental conditions and lead to local population extinctions. We studied threatened boreal caribou (Rangifer tarandus caribou) populations across their distribution in Ontario/Manitoba (Canada) to assess changes in genetic diversity and connectivity in areas of high and low anthropogenic activity. Using data from >1,000 caribou and nine microsatellite loci, we assessed population genetic structure, genetic diversity, and recent migration rates using a combination of network and population genetic analyses. We used Bayesian clustering analyses to identify population genetic structure and explored spatial and temporal variation in those patterns by assembling networks based on R_ST and F_ST as historical and contemporary genetic edge distances, respectively. The Bayesian clustering analyses identified broad‐scale patterns of genetic structure and closely aligned with the R_ST network. The F_ST network revealed substantial contemporary genetic differentiation, particularly in areas presenting contemporary anthropogenic disturbances and habitat fragmentation. In general, relatively lower genetic diversity and greater genetic differentiation were detected along the southern range limit, differing from areas in the northern parts of the distribution. Moreover, estimation of migration rates suggested a northward movement of animals away from the southern range limit. The patterns of genetic erosion revealed in our study suggest ongoing range retraction of boreal caribou in central Canada.     

Discovery and description of the "davtiani" morphotype for Teladorsagia boreoarcticus (Trichostrongyloidea: Ostertagiinae) abomasal parasites in muskoxen, Ovibos moschatus, and caribou, Rangifer tarandus, from the North American Arctic: implications for parasite faunal diversity

Collections to explore helminth diversity among free-ranging ungulates in the North American Arctic revealed the occurrence of a third male, or " davtiani ," morphotype for Teladorsagia boreoarcticus . Designated as T. boreoarcticus forma (f.) minor B, the males occurred with T. boreoarcticus f. major and T. borearcticus f. minor A in endemic populations of muskoxen (Ovibos moschatus wardi) and barrenground caribou (Rangifer tarandus groenlandicus) on Victoria Island, Nunavut, Canada, and in muskoxen and Peary caribou ( Rangifer tarandus pearyi ) on Banks Island, Northwest Territories, Canada. These specimens differ from conspecific morphotypes in the structure of the genital cone and Sj?berg's organ. Relative to T. boreoarcticus f. minor A, specimens of T. boreoarcticus f. minor B are consistently smaller, and mean dimensions for the bursa and spicules do not overlap. The robust spicules are similar in form, particularly in the relative length of the dorsal and ventral processes, but mean total length is substantially less in specimens of T. boreoarcticus f. minor B. Differences that distinguish the minor morphotypes of T. boreoarcticus parallel those demonstrated for the T. trifurcata and T. davtiani morphotypes in association with T. circumcincta sensu stricto. New host and geographic records include the 3 morphotypes of T. boreoarcticus in muskoxen and Peary caribou from Banks Island and in barrenground caribou from Victoria Island. Recognition of the ubiquitous nature of cryptic species emphasizes the need to effectively develop and use our collections-based resources and museum archives to build a robust understanding of the biosphere. Field inventory should include provisions for integrative approaches that preserve specimens suitable for comparative morphology, multi-faceted molecular investigations, and population genetics.     

Impacts of spruce budworm defoliation on the habitat of woodland caribou,moose, and their main predators

Forest logging has contributed to the decline of several woodland caribou populations by causing the fragmentation of mature coniferous stands. Such habitat alterations could be worsened by spruce budworm (SBW) outbreaks. Using 6201 vegetation plots from provincial inventories conducted after the last SBW outbreak (1968–1992) in boreal forests of Québec (Canada), we investigated the influence of SBW‐caused tree defoliation and mortality on understory vegetation layers relevant to woodland caribou and its main predators. We found a positive association between severe outbreaks and the cover of most groups of understory plant species, especially in stands that were dominated by balsam fir before the outbreak, where a high canopy openness particularly benefited relatively fast‐growing deciduous plants. Such increases in early successional vegetation could provide high‐quality forage for moose, which is likely to promote higher wolf densities and increase predation pressure on caribou. SBW outbreaks may thus negatively affect woodland caribou by increasing predation risk, the main factor limiting caribou populations in managed forests. For the near future, we recommend updating the criteria used to define critical caribou habitat to consider the potential impacts of spruce budworm defoliation.     

An epizootic of besnoitiosis in captive caribou (Rangifer tarandus caribou), reindeer (Rangifer tarandus tarandus) and mule deer (Odocoileus hemionus hemionus)

Besnoitia sp. was diagnosed in two caribou (Rangifer tarandus caribou) which died of pneumonia at the Assiniboine Park Zoo (Winnipeg, Manitoba, Canada) in 1983. During the following 3 yr besnoitiosis spread to an isolated herd of caribou, to mule deer (Odocoileus hemionus hemionus) and to reindeer (Rangifer tarandus tarandus). Reduction of exposure to biting insects appears to have reduced the transmission of besnoitiosis within the reindeer herd. The morbidity rate was approximately 82% in caribou and 67% in mule deer over the age of 2 mo. Most animals with clinical signs were euthanized; this precluded an estimation of the disease-related mortality rate. Twenty-eight caribou, 10 mule deer and three reindeer have been euthanized or died as a result of this epidemic. Attempts to artificially transmit the disease to potentially susceptible intermediate and definitive hosts were unsuccessful.     

Explaining Geographic Gradients in Winter Selection of Landscapes by Boreal Caribou with Implications under Global Changes in Eastern Canada

Many animal species exhibit broad-scale latitudinal or longitudinal gradients in their response to biotic and abiotic components of their habitat. Although knowing the underlying mechanism of these patterns can be critical to the development of sound measures for the preservation or recovery of endangered species, few studies have yet identified which processes drive the existence of geographical gradients in habitat selection. Using extensive spatial data of broad latitudinal and longitudinal extent, we tested three hypotheses that could explain the presence of geographical gradients in landscape selection of the endangered boreal woodland caribou (Rangifer tarandus caribou) during winter in Eastern Canadian boreal forests: 1) climate-driven selection, which postulates that geographic gradients are surrogates for climatic gradients; 2) road-driven selection, which proposes that boreal caribou adjust their selection for certain habitat classes as a function of proximity to roads; and 3) an additive effect of both roads and climate. Our data strongly supported road-driven selection over climate influences. Thus, direct human alteration of landscapes drives boreal caribou distribution and should likely remain so until the climate changes sufficiently from present conditions. Boreal caribou avoided logged areas two-fold more strongly than burnt areas. Limiting the spread of road networks and accounting for the uneven impact of logging compared to wildfire should therefore be integral parts of any habitat management plan and conservation measures within the range of the endangered boreal caribou. The use of hierarchical spatial models allowed us to explore the distribution of spatially-structured errors in our models, which in turn provided valuable insights for generating alternative hypotheses about processes responsible for boreal caribou distribution.     

Disturbance-Mediated Apparent Competition Decouples in a Northern Boreal Caribou Range

The most widely reported threat to boreal and mountain populations of woodland caribou (Rangifer tarandus caribou; caribou) involves habitat- or disturbance-mediated apparent competition (DMAC). With DMAC, natural and anthropogenic disturbances that increase the abundance of deciduous-browsing cervids (e.g., moose [Alces alces], deer [Odocoileus spp.]) are thought to promote predator (especially wolf [Canis lupus]) numbers, which heightens predation risk to caribou. We know most about the effects of DMAC on caribou where the species is under threat by anthropogenic activities in relatively productive southern boreal and mountain systems. Yet, >60% of extant boreal caribou range in North America consists of northern shield and taiga ecoregions of low productivity where caribou may compete with only 1 ungulate species (moose) in the context of DMAC. In this environment, we know very little of how DMAC acts as a limiting factor to caribou. In Saskatchewan, Canada, from 2014–2018, using a combination of vegetation sampling, aerial surveys, and telemetry data (n = 38 wolves), we searched for evidence of DMAC (trends in data consistent with the hypothesis) in an 87,193-km² section of the Western Boreal Shield, a poorly productive but pristine region (0.18% of land cover classed as an anthropogenic feature) with a historically high fire-return interval (47% of stands aged <40 years). Despite the high levels of disturbance, moose density was relatively low (47 moose/1,000 km²), likely because of the scarcity of deciduous or mixed-wood stands and low abundance of deciduous browse in the young conifer stands that dominated the landscape. In contrast, boreal caribou density was relatively high for the species (37 caribou/1,000 km²). Wolf density (3.1 wolves/1,000 km²) and pack sizes ( = 4.0 wolves/pack) were low and resident (established) territories were large ( = 4,360 km²; 100% minimum convex polygon). The low density of wolves mirrored the low (standardized) ungulate biomass index (UBI; moose + boreal caribou) of the study area (0.36 UBI/km²). We conclude that wolf and hence caribou populations were not responding in accordance with the outcomes generally predicted by DMAC in our study area because the requisite strong, positive response to fire of deciduous-browse and alternate-prey abundance was lacking. As a limiting factor to caribou, DMAC is likely modulated at a macroecological scale by factors such as net primary productivity, a corollary to the general hypothesis that we advance here (i.e., primary productivity hypothesis of DMAC). We caution against managing for caribou based on the presumption of DMAC where the mechanism does not apply, which may include much of boreal caribou range in the north. © 2020 The Wildlife Society.     

Evidence of alphaherpesvirus infections in Alaskan caribou and reindeer

Background  

The reindeer (Rangifer tarandus tarandus) industry in Alaska began with animals imported from Siberia (Russia) in the 1890's. Cervid herpes virus 2 (CvHV2) is endemic in reindeer in Scandinavia. We sought to determine if the same virus, or similar herpesviruses, were circulating in Alaskan reindeer and caribou (Rangifer tarandus granti). Serum samples from 292 reindeer were collected during annual reindeer handlings (1988-2005) near Nome, Alaska. In 2005, swab samples were collected from 40 calves from this herd, near Nome, Alaska. In 2007, ocular and nasal swab samples were collected from 30 apparently healthy reindeer calves near Wales, Alaska. Samples of plasma and white blood cells were collected from three Alaskan caribou herds, Mulchatna (n = 24), Teshekpuk (n = 34) and the Western Arctic (n = 87) in 2009.     

Prevalence of Giardia and Cryptosporidium and characterization of Cryptosporidium spp. isolated from wildlife,human, and agricultural sources in the North Saskatchewan River Basin in Alberta,Canada

The environmental distribution of Giardia spp. and Cryptosporidium spp. is dependent upon human, agricultural, and wildlife sources. The significance of each source with regard to the presence of parasites in the environment is unknown. This 2-year study examined parasite prevalence in human sewage influent, wildlife, and agricultural sources associated with the North Saskatchewan River Basin in Alberta, Canada. Fecal samples were collected from cow-calf, dairy, and hog operations in the watershed area. Sewage-treatment facilities were sampled bimonthly during the 2-year study, and wildlife scat was collected at locations along tributaries of the North Saskatchewan River. All samples were analyzed for the presence of Giardia and Cryptosporidium, using sucrose-gradient separation followed by immunofluorescent microscopy. Giardia and Cryptosporidium were detected in all three sources. The lowest prevalence of both Giardia (3.28%) and Cryptosporidium (0.94%) was found in wildlife, with 6 of 19 species testing positive. Sewage influent had the highest prevalence of Giardia (48.80%) and Cryptosporidium parvum-like oocysts (5.42%); however, the concentration of both parasites was minimal compared with the concentration detected in cattle feces. Cow-calf sources contained the highest concentration of Giardia (mean 5800/g feces, P < 0.01), and dairy sources contained the highest concentration of C. parvum-like oocysts (mean 295/g feces, P < 0.01). Although prevalence and concentration are higher in cattle feces than in sewage, the Giardia and Cryptosporidium in animal manure do not have direct access to water draining into the North Saskatchewan River. PCR-based characterization of rDNA from isolates of Cryptosporidium collected from Alberta human, pig, calf, mature steer, dog, cat, and beaver hosts revealed distinct genetic differences that may reflect host specificity.     

Giardia sp. and Cryptosporidium sp. infections in primates in fragmented and undisturbed forest in western Uganda

In June 2005, we collected 115 fecal samples from wild primates in western Uganda and examined them for Cryptosporidium sp. and Giardia sp. with the use of immunofluorescent antibody (IFA) detection. We sampled primates from an undisturbed forest in Kibale National Park and from 3 highly disturbed forest fragments outside the park. Of disturbed forest samples, red colobus (Pilocolobus tephrosceles) and red-tailed guenons (Cercopithecus ascanius) harbored species of Cryptosporidium or Giardia, but black-and-white colobus (Colobus guereza) did not. All primate samples from undisturbed forest were negative for both parasites. Seven of 35 (20%) red colobus and 1 of 20 red-tailed guenons (5%) from forest fragments were infected with either Cryptosporidium sp. or Giardia sp. The presence of Cryptosporidium and Giardia species in primates living in forest fragments, but not in primates in undisturbed forest, suggests that habitat disturbance may play a role in transmission or persistence of these pathogens.     

Partitioning drivers of spatial genetic variation for a continuously distributed population of boreal caribou: Implications for management unit delineation

Isolation by distance (IBD) is a natural pattern not readily incorporated into theoretical models nor traditional metrics for differentiating populations, although clinal genetic differentiation can be characteristic of many wildlife species. Landscape features can also drive population structure additive to baseline IBD resulting in differentiation through isolation‐by‐resistance (IBR). We assessed the population genetic structure of boreal caribou across western Canada using nonspatial (STRUCTURE) and spatial (MEMGENE) clustering methods and investigated the relative contribution of IBD and IBR on genetic variation of 1,221 boreal caribou multilocus genotypes across western Canada. We further introduced a novel approach to compare the partitioning of individuals into management units (MU) and assessed levels of genetic connectivity under different MU scenarios. STRUCTURE delineated five genetic clusters while MEMGENE identified finer‐scale differentiation across the study area. IBD was significant and did not differ for males and females both across and among detected genetic clusters. MEMGENE landscape analysis further quantified the proportion of genetic variation contributed by IBD and IBR patterns, allowing for the relative importance of spatial drivers, including roads, water bodies, and wildfires, to be assessed and incorporated into the characterization of population structure for the delineation of MUs. Local population units, as currently delineated in the boreal caribou recovery strategy, do not capture the genetic variation and connectivity of the ecotype across the study area. Here, we provide the tools to assess fine‐scale spatial patterns of genetic variation, partition drivers of genetic variation, and evaluate the best management options for maintaining genetic connectivity. Our approach is highly relevant to vagile wildlife species that are of management and conservation concern and demonstrate varying degrees of IBD and IBR with clinal spatial genetic structure that challenges the delineation of discrete population boundaries.