Characterization of natural organic matter (NOM) derived from sewage sludge compost. Part 1: chemical and spectroscopic properties

In this study changes in the properties of natural organic matter (NOM) were studied during composting of sewage sludge in a laboratory experiment using the pile method. Typical physicochemical parameters were measured during 53 days of composting including humic fractions. The effects of humification on the molecular properties of humic acids (HA) were investigated by 13C CP/MAS NMR spectroscopy. On the basis of chemical analyses, 53 days of composting sewage sludge with structural material can be divided into three phases: (i) domination of rapid decomposition of non-humic, easily biodegradable organic matter (two to three weeks), (ii) domination of organic matter humification and formation of polycondensed, humic-like substances (the next two weeks), (iii) stabilization of transformed organic material and weak microbial activity. Spectroscopic characterization (13C NMR) of compost humic acids reveals changes in their structures during maturation. The changes are highly correlated with the processes taking place in bulk compost.     

Effects of the maturity of wood waste compost on the structural features of humic acids

An analytical scheme for the separation of humic substances (HSs) and non-humic substances (non-HSs) was established to estimate the humification index (HI), which was defined as the ratio of HS carbon content to non-HS carbon content. The alkaline compost-extract contained a mixture of HSs and non-HSs, while acidification of the compost-extract resulted in precipitation of humic acid (HA). The acidified supernatant contained fulvic acid (FA) and non-HSs. In the present study, DAX-8 resin was used to separate FA and non-HSs. HI values, which were estimated to evaluate the maturity of wood waste compost, increased with composting duration. To determine the effects of compost maturity on HA structural features, correlations between HI and indicators of the degree of HA humification (atomic ratios, acidic functional group contents, spectroscopic parameters and molecular weight) were investigated. HI values were significantly related to the indicators of the extent of HA humification during composting.     

Production of renewable polymers from crop plants

Plants produce a range of biopolymers for purposes such as maintenance of structural integrity, carbon storage, and defense against pathogens and desiccation. Several of these natural polymers are used by humans as food and materials, and increasingly as an energy carrier. In this review, we focus on plant biopolymers that are used as materials in bulk applications, such as plastics and elastomers, in the context of depleting resources and climate change, and consider technical and scientific bottlenecks in the production of novel or improved materials in transgenic or alternative crop plants. The biopolymers discussed are natural rubber and several polymers that are not naturally produced in plants, such as polyhydroxyalkanoates, fibrous proteins and poly-amino acids. In addition, monomers or precursors for the chemical synthesis of biopolymers, such as 4-hydroxybenzoate, itaconic acid, fructose and sorbitol, are discussed briefly.     

Inhibition of phosphatase activity by dissolved humic substances and hydrolytic reactivation by natural ultraviolet light

1. Phosphatases released extracellularly by aquatic micro-organisms often complex with humic compounds that are released from decomposing tissues of plants and imported in dissolved and colloidal forms to lakes and rivers. 2. Dissolved humic substances from several natural sources formed complexes with phosphatases of bacterial and algal origin and reduced hydrolytic activity by non-competitive inhibition. Restoration of the hydrolytic enzyme activities from the humic substances–enzyme complexes increased progressively over time when exposed experimentally to natural and artificial ultraviolet (UV) irradiance. 3. Greater phosphatase restoration occurred from humic acid–phosphatase complexes when humic acids were extracted from dissolved organic matter (DOM) of mixed natural plant sources, than when humic acids were isolated from a decomposing single plant species. 4. The data support a previously suggested hypothesis that phosphatases and other enzymes in aquatic ecosystems can complex with humic substances that dominate the DOM pool. These humic substances–enzyme complexes, in which the enzyme is temporarily inactivated, can be transported with water movements and displaced to other sites within the ecosystem. Upon exposure to UV irradiance in the photic zone, functional enzymes can be released. The potential for inactivation and storage of enzyme activity, relocation within the ecosystem, and subsequent reactivation holds important implications for regulation of nutrient cycling in fresh waters.     

Fungal laccases - occurrence and properties

Laccases of fungi attract considerable attention due to their possible involvement in the transformation of a wide variety of phenolic compounds including the polymeric lignin and humic substances. So far, more than a 100 enzymes have been purified from fungal cultures and characterized in terms of their biochemical and catalytic properties. Most ligninolytic fungal species produce constitutively at least one laccase isoenzyme and laccases are also dominant among ligninolytic enzymes in the soil environment. The fact that they only require molecular oxygen for catalysis makes them suitable for biotechnological applications for the transformation or immobilization of xenobiotic compounds.     

Biochemical origin and refractory properties of humic acid extracted from maize plants: the contribution of lignin

The soil organic carbon (SOC) pool is the largest terrestrial reservoir of carbon and plant residues play an important role in its maintenance. Up to 70–80% of SOC in arable soil is composed of humic substances (HS). In these soils post-harvested residues, left in arable soil after harvesting the crops, are the basic source of humus. Previous research indicated that maize plants residue contain a humic acid (HA) fraction possessing recalcitrant compounds that contributed to soil-HA fraction. This study presents updated results obtained using Pyrolysis-Gas Chromatography/Mass Spectrometry (Py-GC/MS) to provide an indication of the contribution of the lignin to the soil HA. Results obtained indicated that the HAs from maize plants were mainly composed of lignin-derived moieties that were likely derived from the partial hydrolysis of p-coumaric and ferulic acid that are linked to lignin, polysaccharides or other biopolymers of the cell wall. Lignin composing the HAs derived from plants and incubated in soil was substantially preserved. Nevertheless the modification of the syringyl/guaiacyl ratio and the oxidation of the side-chains of lignin, suggested a turnover of lignin-derived molecules in soil-HA fraction. This fact indicated an involvement of the alkali insoluble fraction of maize plant residue (humin) in the soil-HA formation, up-dating our previous knowledge.     

Spectroscopic properties of dissolved humic substances - a reflection of land use history in a fen area

The elemental composition and spectroscopic properties of dissolved fulvic acids isolated from different sampling media (topsoil, ground and surface water) of a natural fen area (high portion of organic soils) were examined to reveal the effects of land use history. These effects need to be known if dissolved humic substances are to be a major factor in identifying the impact of present and future changes in land use. Dissolved fulvic acids (topsoil, groundwater) from highly degraded peatlands (due to a long-term agricultural use) exhibit lower C/N ratios, higher absorption in the UV spectra, and higher absorption at 1,620 cm^–1 in the FTIR spectra compared with fulvic acids from relatively intact peatlands. These properties illustrate that long-term agricultural use with high inputs results in increased aromatic structures and a further humification of dissolved fulvic acids due to very strong peat decomposition compared with relatively intact peatlands. Synchronous fluorescence spectra also indicate the higher level of aromatic structures within fulvic acids isolated from sites with long-term agricultural use (high peat decomposition) compared with a land use history resulting in a lower peat decomposition. The different sources of fulvic acids in surface water (precipitation, runoff, interflow, groundwater) are the main reason for these effects not being detected in fulvic acids isolated from surface water. Short-term changes in land use characterized by a transition from crop farming to an unimproved grassland were found not to affect the spectroscopic properties of dissolved fulvic acids. A humification index deduced from the synchronous fluorescence spectra is proposed. We have strong evidence that dissolved humic substances indicate changes in the environmental conditions (both anthropogenic and natural) of wetlands with a high proportion of organic soils.     

Mechanisms of alkaline buffering by peat and quantitative estimation of its buffering capacity

The alkaline buffering capacity of humic substances in persistent organic materials such as peats has been utilized for remediation of alkaline soils. The purposes of the present study were to reveal the mechanism of alkaline buffering and to quantify the alkaline buffering capacity of humic substances contained in three peat samples obtained from Hokkaido, Canada, and Sri Lanka. Acidic functional groups in humic acid and fulvic acid extracted from the three natural peats were quantified by alkalimetric titration and pK distribution analyses of the titration curves. The results indicate that the inherent degree of humification of the organic matter can be identified from the pK distribution, which showed that the humic substances in peats contained diprotic acids. The present study also showed that the ratios of amounts of deprotonation to organic carbon content, as well as the organic carbon content, were needed for quantification of the pH buffering capacity. Moreover, the study showed that the composition of the peat from Sri Lanka was different from those of other peats and that it is a effective organic material for buffering under alkaline conditions.     

UV spectroscopy: a tool for monitoring humification and for proposing an index of the maturity of compost

Composting organic matter is an interesting way to valorize waste. Compost is a product obtained after a humification process. The humification of organic matter during composting was studied by the quantification and monitoring of the evolution of humic substances. The final objective was to be able to evaluate the state of humification based on a spectrum of total humic substances using the method of UV spectral deconvolution. This study presented a new index obtained by UV spectroscopy using the deconvolution of an unknown spectrum of compost with 3 reference spectra. This index was compared to the maturity indices usually used, such as total extraction of humic substances (rate of extraction), IP (index of polymerization) or the humic acid to fulvic acid ratio. This new parameter, which was easy and quick to determine, gave precise information about the quality of the compost. It made it possible to disregard the values of aberrant concentrations caused by the classical protocol of extraction. Compared to the humic acid to fulvic acid ratio, the new index obtained by UV spectral deconvolution showed more representative results: the humic acid to fulvic acid ratio for an apparently non-mature compost was abnormally high, suggesting that the compost was mature, whereas the UV index proposed showed that the compost was really young and not yet humified.     

Efficacy of artificial humic acid as a selective nutrient in HV agar used for the isolation of soil actinomycetes

The efficacies of various kinds of humic acid, as the source of carbon and nitrogen in HV agar reported in the previous paper, were compared to the selective isolation of soil actinomycetes. The 4 types of natural humic acid, A, B, P and Rp were prepared from different soils, and 3 kinds of artificial humic acid were made from carbohydrates and urea in our laboratory.Among the natural humic acids, type Rp, which has been reported to be associated with an initial state of humification in natural conditions, showed the greatest efficacy.However, one of the artificial humic acids, which was prepared from glucose and urea, was considered to be superior to the Rp natural humic acid: 1) The HV agar containing this artificial humic acid (HV-glucose HA agar) produced the same large number of actinomycete colonies on the plate as that of the HV agar with type Rp soil humic acid (HV-Rp agar). 2) The HV-glucose HA agar restricted the number of bacterial colonies on the plates to one-half of that on HV-Rp agar plates. 3) The quality of natural himic acids varies, whereas artificial ones are more constant and can be made in any laboratory.     

Microbial community structure in soils with decomposing residues from plants with genetic modifications to lignin biosynthesis

Lignin is a major determinant of the decomposition of plant materials in soils. Advances in transgenic technology have led to the possibility of modifying lignin to improve the pulping properties of plant materials for papermaking. Previous studies have shown that lignin modifications also affect the rate of plant material decay in soil. The aim of this work was to investigate short-term changes in soil microbial community structures when tobacco residues with reduced activity of enzymes in the monolignol pathway decompose. The residues from lignin-modified plants all decomposed faster than unmodified plant materials. The relative proportions of some of the structural groups of microbial phospholipid fatty acids were affected by genetic modifications, especially the proportion of double unsaturated chain fatty acids, indicative of fungi.     

Effect of biodelignification of rice straw on humification and humus quality by Phanerochaete chrysosporium and Streptomyces badius

The effect of biodelignification of rice straw by two different ligninolytic organisms, Phanerochaete chrysosporium (white-rot fungus) and Streptomyces badius (actinomycetes), on humus quality was investigated during a 56-day incubation at 30 °C. Lignin degradation, the release of humic extract (HE), humic acid (HA) and fulvic acid (FA), E4/E6 ratio of HA, and humification index (HI, HA/FA) were measured during the incubation. Lignin was degraded by both organisms, but to different extents. Lignin was degraded to 41% and 31% by P. chrysosporium and S. badius, respectively. HE released by P. chrysosporium and S. badius were, respectively, 2.10 and 2.13 times larger than that in the control at the maximum values. A significant correlation between lignin degradation and humus-related parameters involving HA fraction showed that both organisms are converting lignin to humic substances.     

Agricultural reclamation of disturbed soils in a lignite mining area using municipal and coal wastes: the humus situation at the beginning of reclamation

Soils disturbed by long-term opencast mining were treated with organic waste materials for reclamation. Humic substances were extracted from waste and soil samples and analysed using pyrolysis-gas chromatography/mass spectrometry and electrofocusing. Furthermore, analytical pyrolysis permits to study all starting materials in situ. According to structural similarities, the statistical evaluation of the pyrolysis results clearly indicates three sample groups. The first group, called compost, implies the waste materials compost and composted sewage sludge. Moreover, pyrolysis revealed that coal humic substances are predominant in brown coal sludge, pure mine soils and mine soils treated with the different organic waste materials. They constitute the second group. The sewage sludge contains a high nitrogen potential, as expected, and represents the third group. Finally, pyrolysis generally showed the specific structural characteristics of humic and fulvic acids, respectively. Electrofocusing yielded for all samples a signal pattern that is typical of humic substances. However, number and ratio of the signals differ according to the special structural features of the samples. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date.     

Transformations of carbon and nitrogen in a Calciorthid soil amended with a range of organic residues

A calcareous soil was treated with an organic fertilizer mixture of grape debris and peat, or with pig manure, chicken manure, city refuse or with aerobic or anaerobic sewage sludges. Changes in different fractions of carbon and nitrogen were followed by analysis of the soil, immediately after these additions, after they had decomposed for six months in the soil, after a maize harvest, and after a subsequent barley harvest. The various forms of carbon had decreased after six months. The rate of decrease varied with the nature of the organic materials. In all samples, the fulvic acids fraction decreased most. The main transformations happened during the first six months whether there was a crop growing or not, but the crops had no influence on the breakdown of the organic materials. The ratio of humic acids/fulvic acids had increased after six months of humification and, in general terms, the final values of the ratio oxidizable carbon/extractable carbon were lower than the initial ones, indicating a higher degree of humification in the organic matter by the end of the experiment. The total nitrogen level remained practically constant after the first six months of humification even after the second crop. Part of the organic nitrogen of the soil samples amended with chicken manure, city refuse or the two sludges was transformed into mineral nitrogen during the humification process. The extractable nitrogen values increased because of the fertilizer applied during the pot trials.     

The disruption of Daphnia magna sodium metabolism by humic substances: mechanism of action and effect of humic substance source

Humic substances have important functions in aquatic systems. While these roles are primarily indirect, influencing the physicochemical environment, recent evidence suggests these materials may also have direct biological actions. This study investigated the mechanism by which humic substances perturb sodium metabolism in a freshwater invertebrate, the water flea Daphnia magna. Aldrich humic acid (AHA) stimulated the maximal rate of whole-body sodium influx (Jmax) when experimental pH was 6 and water calcium content was 0.5 mM. This effect persisted at pH 8 and 1 mM calcium but not at pH 8 in the absence of calcium. An indirect action of AHA on apical transporter activity was proposed to explain this effect. At pH 4 AHA promoted a linear sodium uptake kinetic relationship, attributed to altered membrane permeability due to enhanced membrane binding of humic substances at low pH. In contrast, a real-world natural organic matter sample had no consistent action on sodium influx, suggesting that impacts on sodium metabolism may be limited to commercially available humic materials. These findings question the applicability of commercially available humic substances for laboratory investigations and have significant implications for the study of environmental metal toxicity.     

Overview of bacterial cellulose composites: A multipurpose advanced material

Bacterial cellulose (BC) has received substantial interest owing to its unique structural features and impressive physico-mechanical properties. BC has a variety of applications in biomedical fields, including use as biomaterial for artificial skin, artificial blood vessels, vascular grafts, scaffolds for tissue engineering, and wound dressing. However, pristine BC lacks certain properties, which limits its applications in various fields; therefore, synthesis of BC composites has been conducted to address these limitations. A variety of BC composite synthetic strategies have been developed based on the nature and relevant applications of the combined materials. BC composites are primarily synthesized through in situ addition of reinforcement materials to BC synthetic media or the ex situ penetration of such materials into BC microfibrils. Polymer blending and solution mixing are less frequently used synthetic approaches. BC composites have been synthesized using numerous materials ranging from organic polymers to inorganic nanoparticles. In medical fields, these composites are used for tissue regeneration, healing of deep wounds, enzyme immobilization, and synthesis of medical devices that could replace cardiovascular and other connective tissues. Various electrical products, including biosensors, biocatalysts, E-papers, display devices, electrical instruments, and optoelectronic devices, are prepared from BC composites with conductive materials. In this review, we compiled various synthetic approaches for BC composite synthesis, classes of BC composites, and applications of BC composites. This study will increase interest in BC composites and the development of new ideas in this field.     

In vitro Studies on lignocellulose degradation by microbial strains isolated from composting processes

An in vitro study of different strains isolated from composting piles in relation to their capacity to biodegrade lignocellulose was achieved. Thirteen microorganisms (five bacteria, one actinomycete, and seven fungi) isolated from compost windrows were grown on agricultural wastes and analyzed for cellulose, hemicellulose, and lignin degradation. Hemicellulose fraction was degraded to a lesser extent because only two of the isolates, B122 and B541, identified as Bacillus licheniformis and Brevibacillus parabrevis, respectively, were able to decrease the concentration of this polymer. On the contrary, most of the isolates were capable of reducing cellulose and lignin concentrations; strain B541 was the most active cellulose degrader (51%), while isolate B122 showed higher lignin degradation activity (68%). Consequently, an increase in humification indices was detected, especially with respect to humification index (HI) for both bacteria and CAH/AF in the case of strain B122. According to these data, the use of microbial inoculants as a tool to improve organic matter biodegradation processes (i.e., composting) may become important if microorganisms’ capabilities are in accordance with the final characteristics required in the product (high humic content, lignin content decrease, cellulose concentration decrease, etc.).     

土壤有机质概念和分组技术研究进展

土壤有机质一直是土壤学研究领域的重点,在过去的50年里,对土壤质量可持续性观念的增强和寻找快速判断人为因素对土壤质量影响方向指标的强烈愿望导致了土壤有机质的研究重点发生了急剧变化：对农业措施反映慢的土壤腐殖质类物质的研究正在退出土壤有机质研究领域,而侧重点逐渐转向了土壤中未受微生物作用或正在受微生物降解的有机残体;也出现了新的土壤有机质研究概念和对应测试手段：土壤有机质的比重分组、与有机质结合的土壤颗粒大小分组、土壤团聚体中的POM和iPOM以及土壤水溶性有机质和微生物体C等概念和测试手段被相继提了出来,土壤有机质的研究重点正在从土壤微生物的作用产物(腐殖质)向土壤微生物作用前的、具有部分生物活性的有机质(轻组有机质、砂粒组和粗粉砂粒组中的有机质、POM和iPOM)和完全具有生物活性的有机质(微生物体C和水溶性有机质)转移,这一过程与土壤有机质概念的拓展密不可分。     

Chemical changes in humic substances from compost due to incubation with ligno-cellulolytic microorganisms and effects on lettuce growth

 Differences in the chemical properties of the organic matter from a highly lignocellulosic compost after incubation with two ligno- and cellulolytic microorganisms were studied in this work. Inoculation with either of the two microorganisms assayed, Trichoderma viride or Bacillus sp., of soil-compost mixtures enhanced degradation processes and the degree of organic matter humification. According to the humification index, inoculation with T. viride produced the highest humification rate in all the compost-soil proportions studied (10, 20 and 30%). To evaluate the quality of the extracted humic substances according to their electrofocusing behaviours a new index was established. This index showed an increased yield of humic substances of the lowest electrophoretic mobility (highest molecular weight) in treatments inoculated with Bacillus sp., whereas inoculation with T. viride enhanced the formation of molecules of the fastest electrophoretic mobility. These results, together with the fibre analysis performed, showed that the nature of the humic substances produced after incubation appeared to depend greatly on the degradation pathway carried out by the inoculated microorganism, T. viride or Bacillus sp.. Both degradation-humification pathways beneficially affected lettuce growth, demonstrating that inoculation with any of these two microorganisms may be a useful tool to modify agronomic properties of unripe composts. Received: 2 August 1995/Received revision: 14 November 1995/Accepted: 11 December 1995     

Organic polyanions act as complexants of prion protein in soil

The persistence of prions, the causative agents of transmissible spongiform encephalopathies, in soil constitutes an environmental concern and substantial challenge. Experiments and theoretical modeling indicate that a particular class of natural polyanions diffused in soils and waters, generally referred to as humic substances (HSs), can participate in the adsorption of prions in soil in a non-specific way, mostly driven by electrostatic interactions and hydrogen bond networks among humic acid molecules and exposed polar protein residues. Adsorption of HSs on clay surface strongly raises the adsorption capacity vs proteins suggesting new experiments in order to verify if this raises or lowers the prion infectivity.