Root growth and gravireaction: Influence of the shoot

The kinetics of root gravicurvature of intact maize ( Zea mays L., cv. LG 11) seedlings can be separated into two steps. From 0 to 2 h, a rapid downward bending, enhanced by light, occurred. During the next 4 h (2 to 6 h) no further curvature appeared in the dark, whereas it continued in light. The final root gravicurvature was greater for light-than dark-treated seedlings. Growth was particulary inhibited during the first 2 h.
When intact seedlings were placed horizontally and returned to the dark after a 4 h light pretreatment in a vertical position, only the second step (2 to 6 h) was changed. A negative gravitropism, associated with a stimulation of growth, appeared. Thus, when gravireaction took place in darkness, the final root gravicurvature was similar for the light-pretreated intact seedlings and the dark control. Using apical root segments, this phase of negative gravicurvature was not observed although the stimulation of gravicurvature of light-pretreated roots remained. Similar experiments were performed with seedlings having coleoptile or endosperm removed, after intact seedlings had been exposed to a light pretreatment, and gravireaction took place in the dark. Results indicated that these two organs could play an essential role in the development of gravicurvature and in the regulation of the light effects, respectively.     

生产聚羟基脂肪酸酯的微生物细胞工厂

聚羟基脂肪酸酯(PHA)是一类由微生物合成的、生物可再生、生物可降解、具有多种材料学性能的高分子聚合物,在很多领域有着广泛的应用前景。以下从辅酶工程、代谢工程、微氧生产等方面综述了微生物法生产PHA的研究进展,并对利用PHA合成基因提高基因工程菌的代谢潜能进行了讨论。     

蓝细菌乙醇光合细胞工厂的发展与展望

生物乙醇是极具应用潜力和代表性的生物能源产品之一。以蓝细菌为光合平台,利用二氧化碳和太阳能直接进行乙醇合成可以同时起到降低二氧化碳排放和提供可再生能源的效果,具有重要的研究与应用价值。本文回顾了蓝细菌乙醇光合细胞工厂相关技术的发展历程和现状,从途径优化、底盘选择和代谢工程策略等层面对其最新进展和所遇到的问题进行了总结介绍,并对该技术未来发展方向进行了展望。     

Root and shoot development in peas

Seven root and shoot characters of young pea (Pisum sativum and Pisum fulvum) seedlings were analysed to study genetic variability and to obtain measures of heritability in the broad sense. Considerable genetic variation was noted in all characters studied in the thirty genotypes with the length of the main root showing the greatest variability. Estimates of heritability exceeding 50 % were noted for the number of laterals, length of shoot, weight of root and weight of shoot. Seed weight was significantly correlated only with length of longest lateral and weight of root. The length of the longest lateral and the length to the last lateral were correlated with most other characters.     

Plant factories for the production of monoclonal antibodies

Like animal cells, plant cells bear mechanisms for protein synthesis and posttranslational modification (glycosylation and phosphorylation) that allow them to be seriously considered as factories for therapeutic proteins, including antibodies, with the development of biotechnology. The plant platform for monoclonal antibody production is an attractive approach due to its flexibility, speed, scalability, low cost of production, and lack of contamination risk from animal-derived pathogens. Contemporary production approaches for therapeutic proteins rely on transgenic plants that are obtained via the stable transformation of plant cells as well as the transient (temporary) expression of foreign proteins. In this review, we discuss present-day approaches for monoclonal antibody production in plants (MAPP), features of carbohydrate composition, and methods for the humanization of the MAPP carbohydrate profile. MAPPs that have successfully passed preclinical studies and may be promising for use in clinical practice are presented here. Perspectives on using MAPPs are determined by analyzing their economic benefits and production rates, which are especially important in personalized cancer therapy as well as in cases of bioterrorism and pandemics.     

Yeast cell factories for fine chemical and API production

This review gives an overview of different yeast strains and enzyme classes involved in yeast whole-cell biotransformations. A focus was put on the synthesis of compounds for fine chemical and API (= active pharmaceutical ingredient) production employing single or only few-step enzymatic reactions. Accounting for recent success stories in metabolic engineering, the construction and use of synthetic pathways was also highlighted. Examples from academia and industry and advances in the field of designed yeast strain construction demonstrate the broad significance of yeast whole-cell applications. In addition to Saccharomyces cerevisiae, alternative yeast whole-cell biocatalysts are discussed such as Candida sp., Cryptococcus sp., Geotrichum sp., Issatchenkia sp., Kloeckera sp., Kluyveromyces sp., Pichia sp. (including Hansenula polymorpha = P. angusta), Rhodotorula sp., Rhodosporidium sp., alternative Saccharomyces sp., Schizosaccharomyces pombe, Torulopsis sp., Trichosporon sp., Trigonopsis variabilis, Yarrowia lipolytica and Zygosaccharomyces rouxii.     

Creating plant molecular factories for industrial and nutritional isoprenoid production

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Efficient cell factories for the production of N-methylated amino acids and for methanol-based amino acid production

The growing world needs commodity amino acids such as L-glutamate and L-lysine for use as food and feed, and specialty amino acids for dedicated applications. To meet the supply a paradigm shift regarding their production is required. On the one hand, the use of sustainable and cheap raw materials is necessary to sustain low production cost and decrease detrimental effects of sugar-based feedstock on soil health and food security caused by competing uses of crops in the feed and food industries. On the other hand, the biotechnological methods to produce functionalized amino acids need to be developed further, and titres enhanced to become competitive with chemical synthesis methods. In the current review, we present successful strain mutagenesis and rational metabolic engineering examples leading to the construction of recombinant bacterial strains for the production of amino acids such as L-glutamate, L-lysine, L-threonine and their derivatives from methanol as sole carbon source. In addition, the fermentative routes for bioproduction of N-methylated amino acids are highlighted, with focus on three strategies: partial transfer of methylamine catabolism, S-adenosyl-L-methionine dependent alkylation and reductive methylamination of 2-oxoacids.     

Cellulose factories: advancing bioenergy production from forest trees

Fast-growing, short-rotation forest trees, such as Populus and Eucalyptus, produce large amounts of cellulose-rich biomass that could be utilized for bioenergy and biopolymer production. Major obstacles need to be overcome before the deployment of these genera as energy crops, including the effective removal of lignin and the subsequent liberation of carbohydrate constituents from wood cell walls. However, significant opportunities exist to both select for and engineer the structure and interaction of cell wall biopolymers, which could afford a means to improve processing and product development. The molecular underpinnings and regulation of cell wall carbohydrate biosynthesis are rapidly being elucidated, and are providing tools to strategically develop and guide the targeted modification required to adapt forest trees for the emerging bioeconomy. Much insight has already been gained from the perturbation of individual genes and pathways, but it is not known to what extent the natural variation in the sequence and expression of these same genes underlies the inherent variation in wood properties of field-grown trees. The integration of data from next-generation genomic technologies applied in natural and experimental populations will enable a systems genetics approach to study cell wall carbohydrate production in trees, and should advance the development of future woody bioenergy and biopolymer crops.     

Filamentous fungi as cell factories for heterologous protein production

Filamentous fungi have been used as sources of metabolites and enzymes for centuries. For about two decades, molecular genetic tools have enabled us to use these organisms to express extra copies of both endogenous and exogenous genes. This review of current practice reveals that molecular tools have enabled several new developments. But it has been process development that has driven the final breakthrough to achieving commercially relevant quantities of protein. Recent research into gene expression in filamentous fungi has explored their wealth of genetic diversity with a view to exploiting them as expression hosts and as a source of new genes. Inevitably, the progress in the 'genomics' technology will further develop high-throughput technologies for these organisms.     

Root and shoot growth of semi-dwarf and taller winter wheats

Investigations are reported of root and shoot growth in semi-dwarf and taller winter wheat varieties grown in contrasting soils over three years. Comparisons were made of the distribution with depth of roots, estimated by injecting rubidium-86 into stem bases and counting the content in soil cores. The relative ability to absorb phosphate from different zones was measured from the recovery in aerial parts of ³²P injected into the soil at different depths. The distribution of dry matter in roots and aerial parts, and total root length, was measured using soil cores and samples of aerial parts taken during the growth of the crop. Relative growth rates of the aerial parts followed a sigmoid curve, but those of the roots showed little change between germination and anthesis. There was little evidence of varietal differences in root growth, though there was some indication that at depth the roots of the semi-dwarf varieties were more extensive and absorbed more phosphate than those of the taller varieties.     

Root: shoot ratio as a balance between nitrogen productivity and photosynthesis

Abstract It is shown how root : shoot ratios can be derived from two plant characteristics, (i) the nitrogen productivity (amount of biomass produced per unit of nitrogen in the biomass and per unit of time) and (ii) the relationship between photo-synthetic rate and internal nitrogen concentration. Derived root: shoot ratios are compared with experimental data for seedlings of seven tree species grown with stable internal nitrogen concentrations. Agreement is good but more exact knowledge of the relationship between nutrient status and photosynthesis is needed. It is shown that a formula derived for the root: shoot ratio can also be applied under non-steady-state conditions.     

Direct adventitious shoot formation on seedling radicles in seed cultures of strawberry

Mature seeds of strawberry (Fragaria x ananassa) were placed on Murashige and Skoog medium supplemented with 2.22 μM 6-benzyladenine. After four weeks of culture, and without an intervening callus phase, approximately 36% of the resulting seedling radicles had formed numerous adventitious buds near their tips. A few buds on each radicle developed into shoots, while others formed disorganized calli. Consequently, the seedlings exhibited shoot apices at both ends of the axis of polarity. Our overall results suggest that a considerable level of plasticity in organ determination occurs even in higher plants, and that exogenous growth regulators can cause a root primordium in the radicle to be converted to a shoot primordium.     

Immunohistochemical localization of IAA and ABP1 in strawberry shoot apexes during floral induction

By using an anti-indole-acetic acid (anti-IAA) monoclonal antibody and an anti-auxin-binding protein 1 (anti-ABP1) polyclonal antibody, IAA and ABP1 were immunohistochemically localized in strawberry (Fragaria ananassa Duch.) shoot apexes during floral induction. The spatial distribution patterns of endogenous IAA and ABP1 and their dynamic changes during floral induction were investigated. In addition, the affect of 1-N-naphthylphtalamic acid (NPA) on IAA distribution during floral induction was also analyzed. The results showed that IAA was present in the shoot apexes throughout the floral induction process, gradually concentrating in the shoot apical meristem (SAM). The distribution of ABP1 and its dynamic changes were similar to those of IAA. In addition, the ABP1 immune signal in SAM gradually increased as floral induction developed. On a morphological level, these results indicate both the spatial distribution and dynamic changes in endogenous IAA and ABP1 during the floral induction process. The close correlation found between IAA and ABP1 indicates that a cooperation occurs during the regulation of floral induction. The results also suggest that IAA was the significant agent for floral induction, and that SAM might be the place of the main action. Treatment with NPA during floral induction prevented the accumulation of IAA in the SAM, delayed the process of floral differentiation and induced an abnormal flower development. It is likely that IAA in the shoot apex is produced in young leaves and transported through the vascular tissues to the SAM and other places of function. Finally, an appropriate amount of IAA in the SAM and normal polar auxin transport are essential for floral induction and differentiation in strawberries.     

Systems biology of yeast: enabling technology for development of cell factories for production of advanced biofuels

Transportation fuels will gradually shift from oil based fuels towards alternative fuel resources like biofuels. Current bioethanol and biodiesel can, however, not cover the increasing demand for biofuels and there is therefore a need for advanced biofuels with superior fuel properties. Novel cell factories will provide a production platform for advanced biofuels. However, deep cellular understanding is required for improvement of current biofuel cell factories. Fast screening and analysis (-omics) methods and metabolome-wide mathematical models are promising techniques. An integrated systems approach of these techniques drives diversity and quantity of several new biofuel compounds. This review will cover the recent technological developments that support improvement of the advanced biofuels 1-butanol, biodiesels and jetfuels.     

Root deployment and shoot growth for two desert species in response to soil rockiness

Soil texture, as well as the presence of rocks, can determine the water status, growth, and distribution of plants in arid environments. The effects of soil rockiness and soil particle size distribution on shoot and root growth, root system size, rooting depth, and water relations were therefore investigated for the Crassulacean acid metabolism leaf succulent Agave deserti and the C(4) bunchgrass Pleuraphis rigida after precipitation events during the summer and winter/spring rainfall periods in the northwestern Sonoran Desert. The soils at the field site varied from sandy (<3% rocks by volume) to rocky (up to 35% rocks), with greater water availability at higher water potentials for sandy than for rocky soils. Although A. deserti was absent from the sandiest sites, its shoot and root growth during both rainfall periods were greatest in comparatively sandier sites and decreased as the soil rock content increased. Furthermore, A. deserti had twofold greater root surface area, root?:?leaf area ratio, and mean rooting depth at sandier than at rocky sites. As for A. deserti, shoot growth was greater for P. rigida at the sandier sites than at the rockier sites, even though its root surface area and mean rooting depth did not vary significantly. After early spring rainfall events, the leaf water potential for A. deserti did not differ between rocky and sandy sites, but transpiration rates were almost twofold greater at rocky than at sandy sites. During the same period, P. rigida had lower leaf water potentials and 25% lower transpiration rates at rocky than at sandy sites. The greater variability in the deployment of the root systems of A. deserti in response to soil rockiness may reflect its evergreen habit and slower growth, which allow it to endure periods of lower water availability than does P. rigida, whose leaves die during drought.