The uptake and incorporation of leucine and cystine by the mycelial and yeastlike phases of Blastomyces dermatitidis

Uptake and incorporation of L-leucine-C¹⁴ and L-cystine-S³⁵ was studied in the mycelial [MP] and yeastlike [YP] phases of the dimorphic fungal pathogen,Blastomyces dermatitidis. Both amino acids entered the cells of the two morphological forms ofB. dermatitidis by a permease-like system at low external concentrations of substrate. At high substrate levels, the amino acids entered the cells by a simple diffusion-like process in addition to the permease-like system. Michaelis-Menten constants [K_m] for L-leucine was found to be 1.1×10^–5 M and 4.4×10^–5 M for the MP and YP phases, respectively. The K_m for L-cystine was found to be 1.0×10^–5 M for the MP and 0.5×10^–5 M for the YP. A requirement for energy supplied by metabolic activity was demonstrated by the inhibition of uptake and incorporation of the amino acids by cells incubated with either 2,4-dinitrophenol or sodium azide. Amino acid uptake was broadly tolerant of hydrogen ion concentration, but definite optima were demonstrated at pH 7.0 to 7.5.     

Sulfur cycling in forests

Sulfur is essential for the production of certain amino acids in plants. As amino acid sulfur is the major form of sulfur in trees, there is a strong relationship between organic S and organic N in tree tissue. Sulfur deficiencies occur in parts of southeastern Australia and northwestern North America, remote from pollutant inputs. Since bilogical S requirements of forests are modest (< 5 kg · ha^–1 yr^–1 for net vegetative increment), however, atmospheric S inputs in polluted regions (10–80 kg · ha^–1 yr^–1 ) often exceed not only the forest ecosystem S requirement but also its ability to biologically accumulate S. There is some increase in the SO^2– ₄–S content of forest vegetation in response to elevated atmospheric S inputs, but this capacity is apparently easily saturated. Soil SO^2–2 ₄adsorption is often the dominant feature of S cycling in polluted ecosystems and often accounts for net ecosytem S accumulations.Contribution from a symposium on the role of sulfur in ecosystem processes held August 10, 1983, at the annual meeting of the A.I.B.S., Grand Forks, ND; Myron Mitchell, convenor.     

Endogenous ethylene and reversing methyl jasmonate inhibition of Amaranthus caudatus seed germination by benzyladenine or gibberellin

BA at 10^–5 M, GA₃ at 3×10^–4 M or GA₄₊₇ at 3×10^–5 M partially or largely reversed the inhibition of Amaranthus caudatus seed germination due to JA-Me. BA or GA₃ did not affect ethylene production and ACC oxidase activity in vivo in the presence of JA-Me before radicle protrusion. However, both increased ethylene production after 72 h of incubation, when the reversal of the JA-Me inhibition of seed germination was observed. AVG at 3×10^–4 M decreased ethylene production when it was applied simultaneously with BA and JA-Me or GA₃ and JA-Me, but it had no effect on seed germination. NBD almost completely reversed the stimulatory effect of BA, GA₃ or GA₄₊₇ on the germination of seeds in the presence of JA-Me. Exogenous ethylene reversed the inhibitory effect of NBD. The results indicate that action of endogenous ethylene is involved in the response of JA-Me inhibited seeds to BA or GA_s.     

Composition of the xylem sap of tomato seedlings cultivated on media with HCO3 − and nitrogen source as NO3 − or NH4 +

The results of the experiments discussed here present changes in the chemical composition of xylem sap of tomato seedlings cultivated in hydroponics on media containing 5 mmol HCO₃ ^– and an N-source given as NO₃ ^–, NH₄ ⁺ or these two forms in different proportions. The occurrence of free NH₄ ⁺ in the xylem sap of NH₄ ⁺-seedlings and in NO₃ ^–-seedlings indicates that the process of N-assimilation was not only confined to roots. The application of HCO₃ ^– to the medium effected a decrease in the concentration of NH₄ ⁺ in the xylem sap of NH₄ ⁺-seedlings, having no effect on changes in the concentration of NO₃ ^– or NH₄ ⁺ in NO₃ ^–-seedlings. Malate, citrate, fumarate, and succinate were identified in the xylem sap. The concentration of carboxylates in NO₃ ^–-seedlings exceeded by about 50% that recorded in NH₄ ⁺-seedlings. The highest concentration of malate constituting from 80% to 93.5% of this fraction, was determined in this group of compounds. The enrichment of the medium with HCO₃ ^– ions induced an increase in the content of carboxylates, chiefly of malate. In these experimental conditions an increase in the malate concentration in the xylem sap of NO₃ ^– and NH₄ ⁺-seedlings reached relative values of 100% and 36%, respectively. The total concentration of amides and amino acids was about 2.6 times higher in the xylem sap of NH₄ ⁺-seedlings than in NO₃ ^–-seedlings. Amide glutamine was the main component of this fraction in xylem sap and its total concentration was about 3.3 times higher in NH₄ ⁺-seedlings than that determined in NO₃ ^–-seedlings. Glutamine, glutamate, aspargine, and aspartate constituted from 69% to 77% of this fraction. The concentration of the remaining amino acids varied from 0.6% to 7%. The enrichment of the medium with HCO₃ ^– ions also effected an increase in the concentration of amides and amino acids in the xylem sap by about 17% and 56% in the case of NO₃ ^– and NH₄ ⁺-seedlings, respectively, in comparison with the respective controls (without HCO₃ ^–). Abbreviations: DAG – days after germination; DIC – dissolved inorganic carbon; GOGAT – glutamine:2-oxoglutarate aminotransferase; GS – glutamine synthetase; PAR – photosynthetically active radiation; PEPc – phosphoenolpyruvate carboxylase     

Seasonal coupling between phyto- and bacterioplankton in a sand pit lake (Créteil lake,France)

Phyto- and bacterioplankton biomass and activity were simultaneously measured during the course of one year in the shallow Créteil Lake (France).Phytoplankton was dominated, during the whole year, by small-sized organisms (10 to 25 µm). Bacteria were in a majority small coccoids (<0.3 µm). Phyto -and bacterioplankton abundances averaged respectively 3.3 × 10⁶ cells l^–1 and 6 × 10⁹ cells l^–1.The phasing of the activity and biomass periods suggest a close coupling between phyto- and bacterioplankton. There were two distinct periods of high activity and biomass. Maximal values were observed in summer but an early increase occurred also in winter. Low or undetectable phytoplankton excretion rates, when heterotrophic activity was maximum, indicated a bacterial uptake of up to 100% of the released algal products during the incubation period. Heterotrophic uptake measurements with both glucose and amino acids revealed a seasonal change of the substrates in the lake, glucose uptake being associated more with the maximum activity of the algae, while the amino acids uptake was relatively higher during their decline.The maximal photosynthetic rate averaged 21.5 mgC m^–3 h^–1 and mean Vmax values were 0.056 and 0.050 mgC m^–3 h^–1 respectively for glucose and amino acids uptake.     

Glucose-induced nitrate assimilation in prairie and cultivated soils

Native prairie and grassland soils are known to accumulate little inorganic N; however, N0₃ ^– is constantly being formed and re-immobilized. This suggests that microorganisms in prairie soils would be highly efficient in the assimilation of N0₃ ^– and would regularly have the assimilatory N0₃ ^– reductase (ANR) enzyme in an induced and active state. Aerated slurries and static systems prepared from prairie and cultivated soils amended with glucose and N0₃ ^– were observed for changes in N0₃ ^– concentration with time. Nitrate assimilation in the presence of glucose occurred more rapidly in cultivated than in prairie soils from the same soil map unit. Nitrate assimilation rates were not affected by inoculation of prairie soil with cultivated soil. It has been reported that the addition of glucose and NO₃ ^– to soils results in increased peptidase activity and a release of free amino acids. Mixing, sieving, and slurrying of prairie soils followed by treatment with glucose and NO₃ ^– may release free amino acids and other ANR inhibitors into the prairie soil slurries. Prairie soils had higher concentrations of soluble amino-N than cultivated soils with or without glucose and N0₃ ^– additions. Prairie soils also had greater concentrations of total Kjeldahl N and readily hydrolyzed amino acids than corresponding cultivated soils.     

Impact of Agrobacterium tumefaciens-induced stem tumors on NO3− uptake in Ricinus communis

Developing tumors induced by Agrobacterium tumefaciens, strain C58, on stems of Ricinus communis L. var. gibsonii cv. Carmencita were shown to be strong metabolic sinks for sucrose and amino acids, thus causing higher nutrient demand in the host plant. However, NO₃ ^– uptake and, to a lesser extent, also H₂PO₄ ^– uptake were strongly inhibited. Correspondingly, NO₃ ^– concentration was lower in tumorised than in the control plants. NO₃ ^–reductase activity was the same in both plant types, but it was completely suppressed in the tumors. The electrical membrane potential difference of root cells was unaffected in tumorised plants when soil-grown, but significantly lowered when grown hydroponically. Consistent with the low NO₃ ^– uptake rate, NO₃ ^–-dependent membrane depolarisation at the onset of NO₃ ^–/2H⁺-cotransport was nearly zero. In the phloem sap, sucrose and amino acid concentrations were considerably lower in tumorised than in control plants, and lower below than above the tumor. The qualitative pattern of amino acids of the phloem sap of stems was almost the same in tumorised and control plants. It is concluded that neither the overall amino acid concentration nor special amino acids nor ammonium in the transport phloem suppress NO₃ ^– uptake in the roots. Aminocyclopropane-carboxylate, the precursor of ethylene, which is produced in the tumors in high amounts, was low in the stems and the same in both plant types. Thus, ACC and ethylene were ruled out as directly interfering with nutrient uptake in the roots. Root morphology was strongly affected during tumor development. Root fresh weight decreased to 50% of the controls and lateral root development was almost completely prevented. This suggests that the high tumor ethylene production, together with an increasing concentration of phenolic compounds, severely inhibits the basipetal auxin flow to the roots. Auxin accumulation and retention was confirmed by specifically enhanced expression of the auxin-responsive promoter of the soybean gene GH3:GUS in tumors induced in transgenic Trifolium repens L. Hence, root development is poorer and anion uptake inhibited in tumorised plants. This may be aggravated by abscisic acid accumulation in the tumor and its basipetal export into the roots. Moreover, sucrose depletion of the sieve tubes leads to energy shortage at the root level for maintaining energy-dependent anion uptake.     

Production of extracellular free amino acids by cyanobacteriumAnabaena siamensis Antarikanonda

The cyanobacteriumAnabaena siamensis Antarikanonda, isolated from rice paddies of Bangkok, Thailand, liberates substantial quantities of free amino acids into the external medium irrespective of whether it is growing on N₂, NH₄ ⁺, NO₃ ^– or under nitrogen-starved conditions. Addition of such combined nitrogen causes changes in both intracellular and extracellular free amino acid pool patterns. No overall relationship exists between the amino acid efflux and the intracellular pools. The most abundant free amino acids found in the external media of N₂, NO₃ ^–, NH₄ ⁺-grown and N-starved cultures were phenylalanine, threonine, glutamate, and glycine, respectively. These investigations suggest that amino acid liberation by the cyanobacterium is a selective diffusional process that is sensitive to environmental changes.     

Effects of base cation fertilization on the nutrient status,free amino acids and some carbon fractions of the leaves of sugar maple (Acer saccharum Marsh.)

A study was conducted in the Lower Laurentians of southern Quebec to test the hypothesis that base cation fertilization would improve the nutrient status of declining sugar maples (Acer saccharum Marsh.) and alter the partitioning of leaf C and N. Six 40×40 m plots were delineated in an 80 year old stand of sugar maple. Three plots received a mixture of fertilizer and liming materials (500 kg ha^–1 of K₂SO₄, 250 kg ha^–1 of CaCO₃ and 250 kg ha^–1 of CaMg(CO₂)₂) in the spring of 1989. Leaves from mid crown of dominant or co-dominant maples were sampled monthly during the 1990 growing season. Trees were cored in 1992 to measure their response in diameter growth. Fertilization increased diameter growth and foliar K concentration of trees but reduced foliar Ca concentration. Fertilization resulted in lower starch concentrations and higher ratios of soluble sugars to starch in June and September, and in higher free amino acid concentrations but lower ratio of total non-structural carbohydrates to free amino acids in September. Leaf proline concentration was correlated with leaf starch concentration (r=0.39). The results suggest that amelioration of K deficiencies in sugar maple through fertilization with a mixture of base cations can increase tree growth and affect the seasonal dynamics of foliar C and N pools.Abbreviations FAA free amino acids - TNC total non-structural carbohydrates     

Ethylene metabolism in Pisum sativum L.: Kinetic parameters,the effects of propylene,silver and carbon dioxide and comparison with other systems

The kinetic parameters of in vivo ethylene metabolism by seedlings of Pisum sativum L. cv. Alaska have been determined. The oxidation of ethylene to CO₂, (Ox) and the incorporation of ethylene into the tissue (TI) were both shown to display Michaelis-Menten kinetics (K_m Ox = 0.9 × 10^–6 M liquid phase, V_max Ox = 2.4 × 10^–10 moles g^– dry mass h^–1 K_m TI = 1.6 × 10^–6 M liquid phase, V_max TI = 4.5 × 10^–10 moles g^–1 dry mass h^–1). Propylene competitively inhibited both Ox (K_i = 7.0 × 10^–6 M) and TI (K_i = 3.7 × 10^–7 M). A system comparable to Ox was absent from imbibed cotyledons of Vicia faba L. cv. Aquadulce even at saturating concentrations of ethylene similar to those used in kinetic analysis on Pisum. Silver ions were shown to inhibit TI but promoted Ox, while carbon dioxide inhibited Ox but promoted TI. Kinetic data on both these effects are presented. Data on the effect of a range of concentrations of CO₂ on TI and Ox are also presented.To whom editorial correspondence should be sent     

Planktonic bacterial biomass and seasonal pattern of the heterotrophic uptake and respiration of glucose and amino acids in the shallow sandpit lake of Créteil (Paris Suburb,France)

Biomass and activity of planktonic bacteria were investigated during a one year study in a shallow sandpit lake. The shallowness of the lake helped keep the water column homogeneous regarding bacterioplankton. Small free-living bacteria (0.03 µm³ cell^–1) dominated the populations throughout the period studied. Bacterial abundances varied from 1 to 11 × 10⁶ cells ml^–1. Kinetic parameters (V _max, K + S and T) were determined with ¹⁴C labelled compounds (glucose and amino acids mixture). V _max values were high and averaged 0.056 and 0.050 µgCl^–1 h^–1 for glucose and amino acids respectively. Maximal V _max values were observed in summer at the highest temperatures, but also in early spring. T values were much greater in winter. K + S values were significantly higher for amino acids (3 µg Cl^–1) than for glucose (1 µg Cl^–1). A low percentage of mineralization (about 25% for both tracers) could be the expression of the high growth efficiency expected when bacteria are growing at the expense of low molecular weight compounds as phytoplankton exudates.     

A low-cost chemically defined protein free medium for a recombinant CHO cell line producing prothrombin

A chemically defined protein free medium, DF6S, was developed for the cultivation of a recombinant Chinese hamster ovary cell line (CHO2DS) producing human prothrombin in suspension batch culture. DF6S was formulated by optimizing DME/F12 with amino acids and supplementing the optimized DME/F12 with aurintricarboxylic acid, ethanolamine, ferric sulfate, Pluronic F68, putrescine and sodium pyruvate. From a seeding density of 2.3 × 10⁵ cells ml^–1, CHO2DS cells grown in suspension in DF6S medium reached a maximal cell density of 1.92 × 10⁶ cells ml^–1 with an accumulated prothrombin concentration of 16.7 mg l^–1 after 6 days in culture.     

Nitrate or ammonium nutrition in french bean

Summary Bean Plants were grown in a greenhouse in sand irrigated with nutrient solutions containing either 2 mM NO ₃ ^– or 2 mM NH ₄ ⁺ . After 45 days fresh weight of NH ₄ ⁺ plants was half that of NO ₃ ^– plants. Cation concentration in NH ₄ ⁺ plants was 30% less than in NO ₃ ^– plants. Amino acids (SER, ASN, GLN) accummulated 3 to 10 times more in NH ₄ ⁺ plants. The concentration of organic acids (malic, malonic, citric) was 10 to 30 times higher in NO ₃ ^– plants. The ATP-costings for the synthesis of amino acids and organic acids in NH ₄ ⁺ plants was half that of NO ₃ ^– ones: therefore it could not account for the reduction of growth in the ammonium-fed plants.     

Characteristics of single chemoreceptive units sensitive to amino acids and related substances in the crayfish leg

Summary Impulses in single afferent fibres from amino acid receptors were recorded extracellularly. Doseresponse relations were determined for different superfused amino acids; the relations all had a slope of 1, a common saturation level, and the action of different amino acids was characterized by a specific half saturation concentration,K _M. The most effective amino acids were always L-serine, L-alanine and L-histidine, having aK _M of 10^–5, 2·10^–5 and 1.5·10^–4 mol/l, respectively. The sequence of effective amino acids was the same for all units tested. Structural requirements for optimal stimulatory action of the amino acid molecules were concluded.Abbreviation vH van Harreveld solution This work was supported by the Deutsche ForschungsgemeinschaftWe gratefully acknowledge assistance in electronics from Mr. W. Zeitz, and in mechanics from Mr. D. Beyer and Mr. L. Müller. Technical help was provided by Mrs. E. Köster, secretarial help by Mrs. L. Bauer.     

Effect of Nitrate and Aminoethoxyvinylglycine on Cicer Arietinum L. Nodules

The chickpea (Cicer arietinum L.) cv. HC-1 was raised in earthen pots filled with dune sand in screenhouse. At vegetative stage, i.e. 40 – 45 d after sowing, 10, 20 and 40 mM NO₃ ^– was applied through rooting medium. After 24 h of NO₃ ^– treatments an ethylene biosynthesis inhibitor, aminoethoxyvinylglycine (AVG) in concentration 5 M was given. A conspicuous increase in (5 – 9 fold) ethylene evolution in nodules was noticed after NO₃ ^– treatments. This rise was parallel to the increase in 1-aminocyclopropane-1-carboxylic acid (ACC) content and ACC oxidase activity. On the contrary, a sharp decline in ACC content, ACC oxidase activity and ethylene evolution was observed when AVG was given. A decrease of in acetylene reduction assay (ARA) with NO₃ ^– treatments was associated with decline in cytosolic pH (from 6.12 to 5.45), leghemoglobin (Lb) content, accumulation of H₂O₂ and with the loss of membrane integrity. The lipid peroxidation, followed as MDA production and electrolyte leakage increased with NO₃ ^– treatments, however, the level of MDA was brought down in AVG-treated nodules. Results confirm that ethylene might be involved in mechanism by which the functioning of nodules is adversely affected by NO₃ ^–.     

Immunolocalization of myosin in intact and wounded cells of the green algaErnodesmis verticillata (Kützing) Børgesen

Using in-vivo assays at least two classes of ethylene-binding site are shown to exist in pea epicotyls. These classes appear to have identical affinities for ethylene with a K_D of 6 · 10^–11-8 · 10^–11 M; the fast associating class has high and appropriate affinities for physiologically active analogues of ethylene, and CO₂ is without effect upon bfinding. Experiments involving suppression of endogenous ethylene production demonstrate that previous work may have underestimated both the amount of binding sites present and the affinity of such sites for ethylene. The apparent inhibition of binding by silver appears to be the consequence of a stimulation of endogenous ethylene production. The possible role of the sites as ethylene receptors is discussed.Abbreviations AOA amino oxyacetic acid - K_D dissociation constant We are grateful to the Biotechnology Action Programme of the European Economic Communities for support for this work.     

A thermophilic green sulfur bacterium from New Zealand hot springs,Chlorobium tepidum sp. nov.

Thermophilic green sulfur bacteria of the genus Chlorobium were isolated from certain acidic high sulfide New Zealand hot springs. Cells were Gram-negative nonmotile rods of variable length and contained bacteriochlorophyll c and chlorosomes. Cultures of thermophilic chlorobia grew only under anaerobic, phototrophic conditions, either photoautotrophically or photoheterotrophically. The optimum growth temperature for the strains of thermophilic green sulfur bacteria isolated was 47–48°C with generation times of about 2 h being observed. The upper temperature limit for growth was about 52°C. Thiosulfate was a major electron donor for photoautotrophic growth while sulfide alone was only poorly used. N₂ fixation was observed at 48°C and cell suspensions readily reduced acetylene to ethylene. The G+C content of DNA from strains of thermophilic chlorobia was 56.5–58.2 mol% and the organisms positioned phylogenetically within the green sulfur bacterial branch of the domain Bacteria. The new phototrophs are described as a new species of the genus Chlorobium, Chlorobium tepidum.This paper is dedicated to Professor Norbert Pfennig on the occasion of his 65th birthday     

The relative importance of autotrophic and heterotrophic nitrification in a conifer forest soil as measured by 15N tracer and pool dilution techniques

The importance of heterotrophic nitrification was studied in soil from a mixed-conifer forest. Three sites in the forest were sampled: a clear cut area, a young stand and a mature stand. In the mature stand, the mineral soil (0–10 cm) and the organic layer were sampled separately. Gross rates of N mineralization and nitrification were measured by¹⁵NH ₄ ⁺ and¹⁵NO ₃ ^– isotopic pool dilution, respectively. The rates of autotrophic and heterotrophic nitrification were distinguished by use of acetylene as a specific inhibitor of autotrophic nitrification. In samples supplemented with¹⁵NH ₄ ⁺ and treated with acetylene, no¹⁵NO ₃ ^– was detectable showing that the acetylene treatment effectively blocked the autotrophic nitrification, and that NH ₄ ⁺ was not a substrate for heterotrophic nitrification. In the clear cut area, autotrophic nitrification was the most important NO ₃ ^– generating process with total nitrification (45 ug N kg^–1h^–1) accounting for about one-third of gross N mineralization (140 ug N kg^–1 h^–1). In the young and mature forested sites, gross nitrification rates were largely unaffected by acetylene treatment indicating that heterotrophic nitrification dominated the NO ₃ ^– generating process in these areas. In the mature forest mineral and organic soil, nitrification (heterotrophic) was equal to only about 5% of gross mineralization (gross mineralization rates of 90 ug N kg^–1 h^–1 mineral; 550 ug N kg^–1 h^–1 organic). The gross nitrification rate decreased from the clear cut area to the young forest area to the mineral soil of the mature forest (45; 17; 4.5 ug kg^–1 h^–1 respectively). The¹⁵N isotope pool dilution method, combined with acetylene as an inhibitor of autotrophic nitrification provided an effective technique for assessing the importance of heterotrophic nitrification in the N-cycle of this mixed-conifer ecosystem.     

N2(C2H2−C2H4) fixation in two species of Ceanothus seedlings in second year postfire chaparral

Nitrogen fixation in excised root nodules of 2-year-old, postfireCeanothus tomentosus andC. leucodermis seedlings was measured over an 8-month period using the acetylene reduction method. High levels of NO₃–N and NH₄–N present in postfire soils were limited to the upper 10 cm and did not inhibit nodulation in these deeper-rooting seedlings. Decreases in acetylene reduction activity occurred with decreased soil moisture and increased soil temperature. Nitrogen gains from these two Ceanothus shrub seedlings totalled 1.6 kg N ha^–1 yr^–1.     

RNA Affinity for Molecular L-Histidine; Genetic Code Origins

Selection for affinity for free histidine yields a single RNA aptamer, which was isolated 54 times independently. This RNA is highly specific for the side chain and binds protonated L-histidine with 10²−10³-fold stereoselectivity and a dissociation constant (K_D) of 8–54 μM in different isolates. These histidine-binding RNAs have a common internal loop–hairpin loop structure, based on a conserved RAAGUGGGKKN_0–36 AUGUN_0–2AGKAACAG sequence. Notably, the repetitively isolated sequence contains two histidine anticodons, both implicated by conservation and chemical data in amino acid affinity. This site is probably the simplest structure that can meet our histidine affinity selection, which strengthens experimental support for a “stereochemical” origin of the genetic code.[Reviewing Editor: Niles Lehman]