Basking to attention

Researchers are increasingly concerned that the needs of sharks be included in future marine conservation plans. Nigel Williams reports.     

Polyacelylenic alcohols and alkaloid derivatives from a calcareous marine sponge,Leucetta chagosensis

A chemical investigation of the CH₂Cl₂ extract of the marine sponge Leucetta chagosensis afforded 8 secondary metabolites, namely, pellynol A (1), pellynol B (2), pellynol I (3), pellynol D (4), plakohypaphorine B (5), plakohypaphorine E (6), 4-bromo-1H-pyrrole-3-carboxamide (7), and 2-phenylacetamide (8). The structures of these secondary metabolites were elucidated via NMR spectroscopic analysis, MS experiment and compared with those reported in the literature. This is the first report of compounds 1–8 isolated from the marine sponge genus Leucetta and from the class Calcarea. This work contributes expands the knowledge of the chemical diversity of calcareous marine sponges, and the chemotaxonomic significance of the isolates is also discussed.     

Biogeographic and Evolutionary Patterns of Trace Element Utilization in Marine Microbial World

Trace elements are required by all organisms, which are key components of many enzymes catalyzing important biological reactions. Many trace element-dependent proteins have been characterized; however, little is known about their occurrence in microbial communities in diverse environments, especially the global marine ecosystem. Moreover, the relationships between trace element utilization and different types of environmental stressors are unclear. In this study, we used metagenomic data from the Global Ocean Sampling expedition project to identify the biogeographic distribution of genes encoding trace element-dependent proteins (for copper, molybdenum, cobalt, nickel, and selenium) in a variety of marine and non-marine aquatic samples. More than 56,000 metalloprotein and selenoprotein genes corresponding to nearly 100 families were predicted, becoming the largest dataset of marine metalloprotein and selenoprotein genes reported to date. In addition, samples with enriched or depleted metalloprotein/selenoprotein genes were identified, suggesting an active or inactive usage of these micronutrients in various sites. Further analysis of interactions among the elements showed significant correlations between some of them, especially those between nickel and selenium/copper. Finally, investigation of the relationships between environmental conditions and metalloprotein/selenoprotein families revealed that many environmental factors might contribute to the evolution of different metalloprotein and/or selenoprotein genes in the marine microbial world. Our data provide new insights into the utilization and biological roles of these trace elements in extant marine microbes, and might also be helpful for the understanding of how these organisms have adapted to their local environments.     

Advances in concepts and methods for the marine environment: implications for policy

Science-based indicators aimed at measuring the sustainability of human activities on the environment have become of prime importance in the policy arena. At the international level, the Commission on Sustainable Development and the Convention on Biological Diversity and other Multilateral Environmental Agreements have recognised the need to develop a set of scientific indicators related to changes in biodiversity and other environmental issues able to direct policy decisions. In the marine realm, the study of the effects of both ‘top-down’ extractive activities such as fishing is more and more dealt with, in conjunction with ‘bottom-up’ activities such as nutrient loading and the effects on biogeochemical cycles, marine geochemistry and ecosystem structure and functioning of other pollutants and contaminants. ‘Conventional’ approaches such as the identification of taxa, model organisms and related methodologies will continue playing a key role for the monitoring of human-induced changes in the marine environment. On the other hand, newly developed disciplines such as genomics, proteomics and biodiversity informatics are increasingly looked at as a source of information and applications that can respond to questions and concerns by the policy community such as the need to adapt to global and climate change in the marine environment so as to mitigate its societal implications.

Point-of-View: Arguments for conventional fisheries management and against no-take marine protected areas: only half of the story?

Recent arguments for conventional fisheries management approaches (CFMAs) and against no-take marine protected areas (NTMPAs) are reviewed, i.e. CFMAs are more effective, density-dependent factors will lead to reduced fish stock production in and around NTMPAs, rights-based approaches in combination with CFMAs will be more effective, and natural refuges from fishing already exist. It is concluded that these are largely valid but only from a fisheries management perspective. The arguments of proponents of NTMPAs and those of proponents of CFMAs are considered as contrasting storylines, the divergences between which are based on two key factors: different objectives and different science. In relation to different objectives, it is concluded that the arguments against NTMPAs based on their lack of fisheries management benefits must be considered as only applying to the secondary resource conservation objectives of such designations and not to the primary marine biodiversity conservation objectives. On this basis it is argued that it is counter-productive for NTMPAs to be ‘sold’ on a win–win basis, including their potential to deliver fisheries management benefits, as this detracts from their marine biodiversity conservation objectives and leaves such calls open to arguments that CFMAs are better able to deliver fisheries management objectives. In relation to different science, it is concluded that criticisms of NTMPAs and support for CFMAs implicitly resist the shift from Mode 1 (reductive, intra-disciplinary) to Mode 2 (holistic, trans-disciplinary) science that is inherent in calls for NTMPAs as part of an ecosystem approach. Mode 2 science attempts to accommodate both uncertainty and wider societal values and preferences, and it is argued that arguments for NTMPAs should be more explicitly focussed on this potential. It is difficult, if not impossible and inappropriate, to extend the reductive approach inherent in CFMA analyses to encompass the broader ethical and scientific concerns for the health of marine ecosystems and their component populations and habitats that arguments for NTMPAs reflect. NTMPA proponents might focus on stressing that arguments against such designations and in favour of CFMAs do not encompass such valid concerns, therefore they tell only half of the story.

A new strategy for the synthesis of crucigasterin A,and cytotoxic activity of this compound and its related analogues

Stereoselective total synthesis of bioactive marine natural product crucigasterin A has been accomplished from commercially available and inexpensive l-(?)-malic acid as a starting material. Julia olefination and chelation controlled Grignard additions are the key steps involved in the present synthesis. Cytotoxic properties of crucigasterin A and its related analogues crucigasterins B and D have been evaluated. Crucigasterin A showed promising activities against both the human cervical cancer cell line and human breast adenocarcinoma cell line.     

First evaluation of the cookie-cutter sharks (<Emphasis Type="Italic">Isistius sp.</Emphasis>) predation pattern on different cetacean species in Martinique

Cookie-cutter sharks (Isistius sp.) are small squaloid sharks that live in tropical and sub-tropical oceans. Their name comes from their unique tactic of feeding, which enables them to parasitize marine mega-fauna, like cetaceans. Due to their morphological and anatomical characteristics, they are responsible of crater-like wounds on the skin of marine mammals. Little is known on Isistius sp. around the globe especially in Martinique, which represents a potential habitat. The main goal of this study was to assess the impact of cookie-cutter sharks on cetaceans by determining (1) seasonal changes in the occurrence of bites, (2) intra- and interspecific differences in frequencies and locations of bites among the different species of cetaceans, and (3) link behavior patterns of both cookie-cutter sharks and cetaceans. Data were collected from a 3-year photo-identification database of Cetaceans in Caribbean coast of Martinique. 431 wounds of various stages on 396 individuals from nine species of marine mammals were recorded. Results did not show any significant variation in the occurrence of wounds between seasons. Intermediate state was more important, most injuries were observed on the SCF (Superior Central Flank) (62.40%) and in a lesser extent on young individuals (3.25%). The predation of cookie-cutter sharks on different cetacean species has been confirmed consistently in Martinique. Further studies are required with both scientists and fishermen to better understand their specific role in this marine ecosystem.     

Synthesis of two marine farnesylacetones that dilate the basilar arteries of rabbits

We have synthesized novel vasodilatation farnesylacetones 1 and 2, which are major active constituents of Sargassum siliquastrum collected from the coast of the East Sea in Korea, in 9 steps. A test of the vasodilatation effect of synthetic intermediates and their deprotected compounds on the basilar arteries of rabbits revealed that 14 and 14-1 have a similar dilation effect as their target marine natural products 1 and 2.     

Tyrokeradines A and B,new bromotyrosine alkaloids with an imidazolyl-quinolinone moiety from a Verongid sponge

Two new bromotyrosine alkaloids, tyrokeradines A (1) and B (2), with an imidazolyl-quinolinone moiety have been isolated from an Okinawan marine sponge of the order Verongida. The structures of 1 and 2 were elucidated on the basis of spectroscopic data.     

A tetramic acid derivative with protein tyrosine phosphatase 1B inhibitory activity and a new nortriterpene glycoside from the Indonesian marine sponge Petrosia sp.

During the search for protein tyrosine phosphatase 1B (PTP1B) inhibitors from marine organisms, the known tetramic acid derivative, melophlin C (1), was isolated as an active component together with the new nortriterpenoid saponin, sarasinoside S (2), and three homologues: sarasinosides A₁ (3), I₁ (4), and J (5), from the Indonesian marine sponge Petrosia sp. The structure of 2 was elucidated on the basis of its spectroscopic data. Compound 1 inhibited PTP1B activity with an IC₅₀ value of 14.6 μM, while compounds 2–5 were not active at 15.2–16.0 μM. This is the first study to report the inhibitory effects of a tetramic acid derivative on PTP1B activity.     

Responses of marine organisms to physical and chemical impacts

Studies on the effects of a variety of exogenous and anthropogenic environmental factors, including endocrine disruptors, heavy metals, UV light, high temperature, and others, on marine organisms have been presented at the 2nd Bilateral Seminar Italy–Japan held in November 2006. Reports were discussed in order to reveal the current situation of marine ecosystems, aiming at evaluation and prediction of environmental risks.

Marine invertebrates,model organisms,and the modern synthesis: epistemic values,evo-devo,and exclusion

A central reason that undergirds the significance of evo-devo is the claim that development was left out of the Modern synthesis. This claim turns out to be quite complicated, both in terms of whether development was genuinely excluded and how to understand the different kinds of embryological research that might have contributed. The present paper reevaluates this central claim by focusing on the practice of model organism choice. Through a survey of examples utilized in the literature of the Modern synthesis, I identify a previously overlooked feature: exclusion of research on marine invertebrates. Understanding the import of this pattern requires interpreting it in terms of two epistemic values operating in biological research: theoretical generality and explanatory completeness. In tandem, these values clarify and enhance the significance of this exclusion. The absence of marine invertebrates implied both a lack of generality in the resulting theory and a lack of completeness with respect to particular evolutionary problems, such as evolvability and the origin of novelty. These problems were salient to embryological researchers aware of the variation and diversity of larval forms in marine invertebrates. In closing, I apply this analysis to model organism choice in evo-devo and discuss its relevance for an extended evolutionary synthesis.

Lodopyridones B and C from a marine sediment-derived bacterium Saccharomonospora sp.

HPLC-UV guided isolation of the culture broth of a marine bacterium Saccharomonospora sp. CNQ-490 has led to the isolation of two new natural products, lodopyridones B and C (1 and 2) along with the previously reported lodopyridone A (3). Their chemical structures were established from the interpretation of 2D NMR spectroscopic data and the comparison of NMR data with the lodopyridone A (3). Lodopyridones B and C (1 and 2) possess the thiazole, and chloroquinoline groups which are characteristic features of these molecules. Lodopyridones A–C show weak inhibitory activities on the β-site amyloid precursor protein cleaving enzyme 1 (BACE1).     

Purpuroines A–J,halogenated alkaloids from the sponge Iotrochota purpurea with antibiotic activity and regulation of tyrosine kinases

Ten new halogenated alkaloids named purpuroines A–J (1–10), and a known analogue (11), were isolated from the marine sponge Iotrochota purpurea. Their structures were elucidated by extensive spectroscopic (IR, MS, 1D and 2D NMR) data analyses. The inhibitory activity of some compounds against a panel of human disease related fungi and bacteria are evaluated. Bioassay for the regulation of tyrosine kinases revealed compounds 1 and 4 possessing selective inhibition against the kinase LCK. Primary structure–activity relationship is discussed.     

(−)-Dibromophakellin: An α2B adrenoceptor agonist isolated from the Australian marine sponge,Acanthella costata

Bioassay-guided fractionation of the organic extract from the marine sponge Acanthella costata resulted in the isolation of the known natural product, (?)-dibromophakellin (1). Using a fluorescence imaging plate reader (FLIPR) based assay, compound 1 was identified as displaying agonist activity against the α_2B adrenoceptor, with an EC₅₀ of 4.2 μM. Debromination and Suzuki–Miyaura coupling reactions were undertaken in order to provide structure activity data about the pyrrole ring of this marine metabolite. These synthetic studies generated the known natural product analogues, (?)-phakellin (2), and (?)-monobromophakellin (3), along with the new synthetic derivatives (?)-4-bromo-5-phenylphakellin (5) and (?)-4,5-diphenylphakellin (6). Substitution of the C-5 Br of 1 with H (2 and 3) or phenyl (5 and 6) resulted in loss of activity indicating that Br at C-5 is required for agonist activity.     

Marine spongian sesquiterpene phenols,dictyoceratin-C and smenospondiol,display hypoxia-selective growth inhibition against cancer cells

In the course of our search for hypoxia-selective growth inhibitors against cancer cells, a sesquiterpene phenol, dictyoceratin-C (1), was isolated from the Indonesian marine sponge of Dactylospongia elegans under the guidance of the constructed bioassay. Dictyoceratin-C (1) inhibited proliferation of human prostate cancer DU145 cells selectively under hypoxic condition in a dose-dependent manner at the concentrations ranging from 1.0 to 10 μM. The subsequent structure–activity relationship study using nine sesquiterpene phenol/quinones (2–10), which were isolated from marine sponge, was executed. We found that smenospondiol (2) also exhibited the similar hypoxia-selective growth inhibitory activity against DU145 cells, and the para-hydroxybenzoyl ester moiety would be important for hypoxia-selective growth inhibitory activity of 1. In addition, the mechanistic analysis of dictyoceratin-C (1) revealed that the 10 μM of 1 inhibited accumulation of Hypoxia-Inducible Factor-1α under hypoxic condition.     

Assessing Marine Resource Exploitation in Lofanga,Tonga: One Case Study—Two Approaches

This paper is an attempt to combine the results and conclusions of two independently designed research projects, in order to achieve a more complete understanding of the degree of exploitation of living marine resources by a small Tongan coastal fishing community. Results of a socioeconomic resource-driven survey and an anthropological study adopting a commons dilemma approach, agree substantially on the impact of tradition and changes, but disagree with regard to the driving forces. The socioeconomic study argues that dynamics between traditional and modern economic values best explain the state of the community’s coastal fisheries; while the anthropological study argues that social values and obligations still determine to a great extent the goals people pursue with their economic activities. Current fishing pressure, the marine tenure system, and present and future marketing potentials are all factors which may result in conflict between the traditional Tongan system and the modern cash-based, remittance sustained system. These will ultimately affect the current and future status of coastal resources and the social cohesion of the community.

Five new indole derivatives from the cyanobacterium Moorea producens

Chemical analysis of the hydrophilic fraction from marine cyanobacterium Moorea producens extracts led to the isolation of five new indole derivatives (1-5). So far, 2-formyl-4,5,6,7-tetrahydroindole has been reported only for 6 from the nature, consequently compounds 1-5 were the second representatives of this class. Cytotoxicity, diatom growth inhibition, and antibacterial activity tests for compounds 1-5 showed no bioactivity at the concentration tested.     

Nakijiquinones E and F,new dimeric sesquiterpenoid quinones from marine sponge

Two new dimeric sesquiterpenoid quinones, nakijiquinones E (1) and F (2), have been isolated from an Okinawan marine sponge, and the structures and relative stereochemistry of 1 and 2 were elucidated on the basis of the spectral data. Nakijiquinones E (1) and F (2) were the first dimeric sesquiterpenoid quinones possessing a 3-aminobenzoate moiety.