A novel method to improve individual animal identification based on camera-trapping data

We present a novel method to improve individual identification of animals based on camera-trapping data. The method combines computer tools and human visual recognition to help multiple users to reach identification agreement. Application of this method to a bobcat (Lynx rufus) picture database from the Jasper Ridge Biological Preserve resulted in a progressive increase in identification agreement between 2 users, as measured by the adjusted Rand index (ARI). An initial ARI value of 0.28 increased to a final value of 0.84 (1 = maximum agreement). In contrast, comparisons involving random picture groupings consistently rendered low ARI values (≤0.05). The numbers of individuals named by the 2 users decreased from initial values of 46 and 43 to final values of 25 and 29, respectively. The tool presented here will help researchers and wildlife managers to identify individual mammals and monitor populations. © 2011 The Wildlife Society.     

Cross-modal individual recognition in domestic horses (Equus caballus) extends to familiar humans

It has recently been shown that some non-human animals can cross-modally recognize members of their own taxon. What is unclear is just how plastic this recognition system can be. In this study, we investigate whether an animal, the domestic horse, is capable of spontaneous cross-modal recognition of individuals from a morphologically very different species. We also provide the first insights into how cross-modal identity information is processed by examining whether there are hemispheric biases in this important social skill. In our preferential looking paradigm, subjects were presented with two people and playbacks of their voices to determine whether they were able to match the voice with the person. When presented with familiar handlers subjects could match the specific familiar person with the correct familiar voice. Horses were significantly better at performing the matching task when the congruent person was standing on their right, indicating marked hemispheric specialization (left hemisphere bias) in this ability. These results are the first to demonstrate that cross-modal recognition in animals can extend to individuals from phylogenetically very distant species. They also indicate that processes governed by the left hemisphere are central to the cross-modal matching of visual and auditory information from familiar individuals in a naturalistic setting.     

Nutritional ecology beyond the individual: a conceptual framework for integrating nutrition and social interactions

Over recent years, modelling approaches from nutritional ecology (known as Nutritional Geometry) have been increasingly used to describe how animals and some other organisms select foods and eat them in appropriate amounts in order to maintain a balanced nutritional state maximising fitness. These nutritional strategies profoundly affect the physiology, behaviour and performance of individuals, which in turn impact their social interactions within groups and societies. Here, we present a conceptual framework to study the role of nutrition as a major ecological factor influencing the development and maintenance of social life. We first illustrate some of the mechanisms by which nutritional differences among individuals mediate social interactions in a broad range of species and ecological contexts. We then explain how studying individual‐ and collective‐level nutrition in a common conceptual framework derived from Nutritional Geometry can bring new fundamental insights into the mechanisms and evolution of social interactions, using a combination of simulation models and manipulative experiments.     

Joyful by nature: approaches to investigate the evolution and function of joy in non-human animals

The nature and evolution of positive emotion is a major question remaining unanswered in science and philosophy. The study of feelings and emotions in humans and animals is dominated by discussion of affective states that have negative valence. Given the clinical and social significance of negative affect, such as depression, it is unsurprising that these emotions have received more attention from scientists. Compared to negative emotions, such as fear that leads to fleeing or avoidance, positive emotions are less likely to result in specific, identifiable, behaviours being expressed by an animal. This makes it particularly challenging to quantify and study positive affect. However, bursts of intense positive emotion (joy) are more likely to be accompanied by externally visible markers, like vocalisations or movement patterns, which make it more amenable to scientific study and more resilient to concerns about anthropomorphism. We define joy as intense, brief, and event-driven (i.e. a response to something), which permits investigation into how animals react to a variety of situations that would provoke joy in humans. This means that behavioural correlates of joy are measurable, either through newly discovered ‘laughter’ vocalisations, increases in play behaviour, or reactions to cognitive bias tests that can be used across species. There are a range of potential situations that cause joy in humans that have not been studied in other animals, such as whether animals feel joy on sunny days, when they accomplish a difficult feat, or when they are reunited with a familiar companion after a prolonged absence. Observations of species-specific calls and play behaviour can be combined with biometric markers and reactions to ambiguous stimuli in order to enable comparisons of affect between phylogenetically distant taxonomic groups. Identifying positive affect is also important for animal welfare because knowledge of positive emotional states would allow us to monitor animal well-being better. Additionally, measuring if phylogenetically and ecologically distant animals play more, laugh more, or act more optimistically after certain kinds of experiences will also provide insight into the mechanisms underlying the evolution of joy and other positive emotions, and potentially even into the evolution of consciousness.     

Food safety behaviour and handling practices among Saudi women during the COVID-19 pandemic

Although it is commonly known that viruses cannot multiply in food as they need a living host for growth, adenoviruses and corona viruses can reportedly survive on surfaces and food packages for several days. Therefore, food item mishandling could increase the risk of infection. In this cross-sectional study, we assessed the changes in the food purchasing habits, food safety behavior, and food handling practices among Saudi women during the COVID-19 pandemic. The study included 1356 women who were randomly approached via convenience sampling using an anonymous questionnaire distributed through various social media platforms. The variables were described in terms of frequency and percentage, and the Chi-square test was applied to assess the relationship between the dependent and independent variables. Approximately 62.5% of the participants were aware that SARS-CoV-2 is not transmitted via food. Most participants (90%) reported a shift from outdoor to indoor meal preparation, along with avoidance of visits to grocery stores for food purchase (55%) and increased usage of online grocery delivery services (27%). Most participants obtained good overall scores for food safety behavior during grocery shopping (mean score: 10.83±1.62/12 points, 90.25%), grocery unpacking at home (10.60±2.65/13 points, 81.55%), and personal hygiene (28.84±3.16/36 points, 80%). However, a moderate overall score was obtained for food preparation practices (7.77 ±1.91/12 points, 77.7%). Older and/or retired individuals, patients with chronic diseases, and/or individuals living with children showed better food safety behavior and handling practices compared to their counterparts. This study reported good overall food safety behavior and handling practice scores among participants under most categories studied. However, our results highlight the need for more customized public education programs for Saudi women, who are the primary food handlers in most households, particularly during food preparation, to further improve food safety practices and prevent potential food mishandling, which will eventually help preventing the spread of COVID-19.     

Unraveling the dynamics of a ground‐dwelling beetle population exposed to quarry exploitation and restoration practices

Quarry exploitation and restoration practices are expected to have overarching and contrasting impacts on animal communities. Although many studies describe these impacts, they generally overlook the effects on population dynamics and individual movements. We assessed the impacts of quarry exploitation and restoration activity on population dynamics, individual movement, and habitat use of a sand‐dwelling specialist beetle (Scarites cyclops). The study was performed on three plots: one adjacent to the margin of quarry exploitation, another subjected to restoration practices, and a control plot with no disturbance. A capture‐mark‐recapture approach was undertaken to estimate population parameters, movement, and habitat use. In the exploitation plot S. cyclops exhibited lower probability of recapture and lower apparent survival, as well as many movements fleeing away from quarry limits. Habitat suitability modeling showed that the exploitation plot provided better habitat conditions for the species than the restoration plot. It exhibited higher bare ground cover with scattered clumps of vegetation and higher proportions of fine sand (<0.4 mm). In the restoration plot, S. cyclops population showed a lower abundance, with a higher rate of recaptures, and a more limited dispersal ability of the individuals. There is an apparent early stage of colonization by S. cyclops in the restoration plot, but movements may already be hampered by unsuitable habitat restoration (higher herbaceous cover and different soil texture). We suggest preserving suitable habitat patches in the vicinity of the impacted areas and providing dispersal routes. Beyond vegetation, soil texture must be considered to allow local animal communities to establish in restored areas.     

Global positioning system and associated technologies in animal behaviour and ecological research

Biologists can equip animals with global positioning system (GPS) technology to obtain accurate (less than or equal to 30 m) locations that can be combined with sensor data to study animal behaviour and ecology. We provide the background of GPS techniques that have been used to gather data for wildlife studies. We review how GPS has been integrated into functional systems with data storage, data transfer, power supplies, packaging and sensor technologies to collect temperature, activity, proximity and mortality data from terrestrial species and birds. GPS ‘rapid fixing’ technologies combined with sensors provide location, dive frequency and duration profiles, and underwater acoustic information for the study of marine species. We examine how these rapid fixing technologies may be applied to terrestrial and avian applications. We discuss positional data quality and the capability for high-frequency sampling associated with GPS locations. We present alternatives for storing and retrieving data by using dataloggers (biologging), radio-frequency download systems (e.g. very high frequency, spread spectrum), integration of GPS with other satellite systems (e.g. Argos, Globalstar) and potential new data recovery technologies (e.g. network nodes). GPS is one component among many rapidly evolving technologies. Therefore, we recommend that users and suppliers interact to ensure the availability of appropriate equipment to meet animal research objectives.     

Behavioural defences in animals against pathogens and parasites: parallels with the pillars of medicine in humans

No other theme in animal biology seems to be more central than the concept of employing strategies to survive and successfully reproduce. In nature, controlling or avoiding pathogens and parasites is an essential fitness strategy because of the ever-present disease-causing organisms. The disease-control strategies discussed here are: physical avoidance and removal of pathogens and parasites; quarantine or peripheralization of conspecifics that could be carrying potential pathogens; herbal medicine, animal style, to prevent or treat an infection; potentiation of the immune system; and care of sick or injured group members. These strategies are seen as also encompassing the pillars of human medicine: (i) quarantine; (ii) immune-boosting vaccinations; (iii) use of medicinal products; and (iv) caring or nursing. In contrast to animals, in humans, the disease-control strategies have been consolidated into a consistent and extensive medical system. A hypothesis that explains some of this difference between animals and humans is that humans are sick more often than animals. This increase in sickness in humans leading to an extensive, cognitively driven medical system is attributed to an evolutionary dietary transition from mostly natural vegetation to a meat-based diet, with an increase in health-eroding free radicals and a dietary reduction of free-radical-scavenging antioxidants.     

Linking behavioral thermoregulation,boldness, and individual state in male Carpetan rock lizards

Mechanisms affecting consistent interindividual behavioral variation (i.e., animal personality) are of wide scientific interest. In poikilotherms, ambient temperature is one of the most important environmental factors with a direct link to a variety of fitness‐related traits. Recent empirical evidence suggests that individual differences in boldness are linked to behavioral thermoregulation strategy in heliothermic species, as individuals are regularly exposed to predators during basking. Here, we tested for links between behavioral thermoregulation strategy, boldness, and individual state in adult males of the high‐mountain Carpetan rock lizard (Iberolacerta cyreni). Principal component analysis revealed the following latent links in our data: (i) a positive relationship of activity with relative limb length and color brightness (PC1, 23% variation explained), (ii) a negative relationship of thermoregulatory precision with parasite load and risk‐taking (PC2, 20.98% variation explained), and (iii) a negative relationship between preferred body temperature and relative limb length (PC3, 19.23% variation explained). We conclude that differences in boldness and behavioral thermoregulatory strategy could be explained by both stable and labile state variables. The moderate link between behavioral thermoregulatory strategy and risk‐taking personality in our system is plausibly the result of differences in reproductive state of individuals or variation in ecological conditions during the breeding season.     

林业活动和森林片断化对甲虫多样性的影响及保护对策

森林片断化是造成生物多样性丧失的主要原因之一,而林业活动是导致森林片断化的重要因素,同时也在森林恢复中起重要作用。本文从小尺度、局域尺度以及生物地理尺度（大尺度）3个生态尺度分析林业活动和森林片断化对甲虫多样性的影响。在小尺度下,林业活动能够通过改变森林生境或微生境的类型和特性而影响甲虫物种分布。在局域尺度下,林业活动（尤其是森林砍伐）往往能提高许多甲虫类群（如步甲）的物种丰富度（α多样性）,这主要与来自周围环境物种扩散以及保留了若干耐受新环境能力较强的森林物种有关;然而,对森林生境依赖性很强的特有种受到了森林片断化的负面影响,面临局域种群灭绝的危险。在生物地理尺度下,林业活动（伐木或森林恢复）使森林生境单一化、异质性降低,从而导致对森林生境变化敏感的物种种群数量降低甚至灭绝。基于以上结果,可以归纳出3个基本原则用于指导林业管理,既能保证林业经济收益,又能维持森林生物多样性。首先,保留大面积的原始森林作为特有种的栖息环境基地,为这些物种在将来森林恢复后重新定居提供资源;其次,由于保护区内原始森林面积有限,且所代表的生境类型有限,所以发展依据自然干扰模式的新伐木方法十分必要;最后,依据自然规律（如火灾）进行森林恢复和天然演替,避免森林的单一化,丰富森林生境类型。     

人类聚居地的古树:分布格局、驱动因素与保护实践

古树是人类聚居地最具标志性的生物体,具有极其重要的社会文化和生态价值。由于人类活动和气候变化的影响,全球范围内的古树正面临衰退。如何保护人类聚居地的古树及其社会文化和生态价值是科学家和林业管理者需要共同思考的问题。尽管目前在世界范围内有一定数量的古树研究论文发表,但仍然缺乏对人类聚居地古树研究现状和观点的总结。我们从古树的社会文化和生态价值、分布格局和驱动因素、保护的文化根源和保护实践,以及古树保护面临的挑战等方面对目前人类聚居地古树的研究现状和观点进行了综述。希望能够对未来古树的研究提供一定的思考和启发,并为古树的可持续保护提供建议和参考。     

Empathy,home environment,and attitudes toward animals in relation to animal abuse

Abstract

Recent years have seen an increase in interest in the social, behavioral, psychological, and developmental correlates of animal abuse. The current study examined the relationships between empathy, family environment, attitudes toward animals and participation in animal abuse using a self-report methodology among a sample of college students. Within a sample of 286 college students, scores on the Attitudes Toward the Treatment of Animals Scale (ATTAS) were significantly correlated with scores on the Interpersonal Reactivity Index (IRI), a measure of empathy. The Caregiving subscale of the ATTAS was found to significantly differentiate abusers from non-abusers, and to differentiate abusers who reported having first engaged in abuse prior to age 13 years from those who reported having first engaged in abuse at age 13 or later. Abusers scored significantly higher on the IRI Fantasy subscale than did non-abusers. Men who reported a history of sexual abuse were more likely to report participating in animal abuse than were those who reported no history of sexual abuse. Finally, the effect of sexual abuse on animal abuse was found to be independent of individual differences in empathy and attitudes toward animals. The potential roles of trauma and fantasy in the genesis of animal abuse are discussed.     

Feedback loops between 3D vegetation structure and ecological functions of animals

Ecosystems function in a series of feedback loops that can change or maintain vegetation structure. Vegetation structure influences the ecological niche space available to animals, shaping many aspects of behaviour and reproduction. In turn, animals perform ecological functions that shape vegetation structure. However, most studies concerning three-dimensional vegetation structure and animal ecology consider only a single direction of this relationship. Here, we review these separate lines of research and integrate them into a unified concept that describes a feedback mechanism. We also show how remote sensing and animal tracking technologies are now available at the global scale to describe feedback loops and their consequences for ecosystem functioning. An improved understanding of how animals interact with vegetation structure in feedback loops is needed to conserve ecosystems that face major disruptions in response to climate and land-use change.     

Advances in research on the prenatal development of skeletal muscle in animals in relation to the quality of muscle-based food. I. Regulation of myogenesis and environmental impact

Skeletal muscle development in vertebrates - also termed myogenesis - is a highly integrated process. Evidence to date indicates that the processes are very similar across mammals, poultry and fish, although the timings of the various steps differ considerably. Myogenesis is regulated by the myogenic regulatory factors and consists of two to three distinct phases when different fibre populations appear. The critical times when myogenesis is prone to hormonal or environmental influences depend largely on the developmental stage. One of the main mechanisms for both genetic and environmental effects on muscle fibre development is via the direct action of the growth hormone-insulin-like growth factor (GH-IGF) axis. In mammals and poultry, postnatal growth and function of muscles relate mainly to the hypertrophy of the fibres formed during myogenesis and to their fibre-type composition in terms of metabolic and contractile properties, whereas in fish hyperplasia still plays a major role. Candidate genes that are important in skeletal muscle development, for instance, encode for IGFs and IGF-binding proteins, myosin heavy chain isoforms, troponin T, myosin light chain and others have been identified. In mammals, nutritional supply in utero affects myogenesis and the GH-IGF axis may have an indirect action through the partitioning of nutrients towards the gravid uterus. Impaired myogenesis resulting in low skeletal myofibre numbers is considered one of the main reasons for negative long-term consequences of intrauterine growth retardation. Severe undernutrition in utero due to natural variation in litter or twin-bearing species or insufficient maternal nutrient supply may impair myogenesis and adversely affect carcass quality later in terms of reduced lean and increased fat deposition in the progeny. On the other hand, increases in maternal feed intake above standard requirement seem to have no beneficial effects on the growth of the progeny with myogenesis not or only slightly affected. Initial studies on low and high maternal protein feeding are published. Although there are only a few studies, first results also reveal an influence of nutrition on skeletal muscle development in fish and poultry. Finally, environmental temperature has been identified as a critical factor for growth and development of skeletal muscle in both fish and poultry.     

Acquisition of object-robbing and object/food-bartering behaviours: a culturally maintained token economy in free-ranging long-tailed macaques

The token exchange paradigm shows that monkeys and great apes are able to use objects as symbolic tools to request specific food rewards. Such studies provide insights into the cognitive underpinnings of economic behaviour in non-human primates. However, the ecological validity of these laboratory-based experimental situations tends to be limited. Our field research aims to address the need for a more ecologically valid primate model of trading systems in humans. Around the Uluwatu Temple in Bali, Indonesia, a large free-ranging population of long-tailed macaques spontaneously and routinely engage in token-mediated bartering interactions with humans. These interactions occur in two phases: after stealing inedible and more or less valuable objects from humans, the macaques appear to use them as tokens, by returning them to humans in exchange for food. Our field observational and experimental data showed (i) age differences in robbing/bartering success, indicative of experiential learning, and (ii) clear behavioural associations between value-based token possession and quantity or quality of food rewards rejected and accepted by subadult and adult monkeys, suggestive of robbing/bartering payoff maximization and economic decision-making. This population-specific, prevalent, cross-generational, learned and socially influenced practice may be the first example of a culturally maintained token economy in free-ranging animals.This article is part of the theme issue ‘Existence and prevalence of economic behaviours among non-human primates''.     

Integrating sensory ecology and predator-prey theory to understand animal responses to fire

Fire regimes are changing dramatically worldwide due to climate change, habitat conversion, and the suppression of Indigenous landscape management. Although there has been extensive work on plant responses to fire, including their adaptations to withstand fire and long-term effects of fire on plant communities, less is known about animal responses to fire. Ecologists lack a conceptual framework for understanding behavioural responses to fire, which can hinder wildlife conservation and management. Here, we integrate cue-response sensory ecology and predator-prey theory to predict and explain variation in if, when and how animals react to approaching fire. Inspired by the literature on prey responses to predation risk, this framework considers both fire-naïve and fire-adapted animals and follows three key steps: vigilance, cue detection and response. We draw from theory on vigilance tradeoffs, signal detection, speed-accuracy tradeoffs, fear generalization, neophobia and adaptive dispersal. We discuss how evolutionary history with fire, but also other selective pressures, such as predation risk, should influence animal behavioural responses to fire. We conclude by providing guidance for empiricists and outlining potential conservation applications.