Epigenetic Programming： The Challenge to Species Hybridization

In many organisms, the genomes of individual species are isolated by a range of reproductive barriers that act before or after fertilization. Successful mating between species results in the presence of different genomes within a cell （hybridization）, which can lead to incompatibility in cellular events due to adverse genetic interactions. In addition to such genetic interactions, recent studies have shown that the epigenetic control of the genome, silencing of transposons, control of non-additive gene expression and genomic imprinting might also contribute to reproductive barriers in plant and animal species. These genetic and epigenetic mechanisms play a significant role in the prevention of gene flow between species. In this review, we focus on aspects of epigenetic control related to hybrid incompatibility during species hybrid- ization, and also consider key mechanism（s） in the interaction between different genomes.     

Potential Risk of Hybridization in Ex Situ Collections of Two Endangered Species of Sinojackia Hu （Styracaceae）

Spontaneous hybridization in ex situ facilities can undermine the genetic integrity of ex situ collections and potentially contaminate open-pollinated seeds or seedlings destined for the reintroduction of endangered plant species into the wild. In the present study, the potential risk of hybridization between two endangered Chinese endemic species, namely Sinojackia xylocarpa Hu and S. rehderiana Hu, which are naturally allopatric species but were conserved ex situ in Wuhan Botanical Garden （WBG）, Wuhan, China, were investigated over three consecutive years from 2003 to 2005. The entire overlapping flowering period of the two species was 14-20 d and the two species shared the same pollinator insects during the entire flowering season in WBG. The floral isolation between the two species was not an issue in the ex sltu collection at WBG. The results suggest an opportunity for pollen transfer between species and a potential risk of genetic Introgression and loss of genetic identity of open-pollinated seeds produced in the ex sltu Collection of these two endangered species. An artificial reciprocal cross between S xylocarpa and S. rehderlana confirmed that the two congener species could readily set seeds, indicating no post-pollination barriers to hybridization and the importance of spatial isolation as a barrier to inter-specific crossing. Therefore, to manage these crossable species with overlapping flowering times and shared pollination vectors in ex situ facilities, spatial isolation should be carefully considered to minimize the possibility of spontaneous hybridization.     

Ceratopteris chunii and Ceratopteris chingii(Pteridaceae),two new diploid species from China,based on morphological,cytological,and molecular dataOA

Understanding how natural hybridization and polyploidizations originate in plants requires identifying potential diploid ancestors.However,cryptic plant species are widespread,particularly in Ceratopteris(Pteridaceae).Identifying Ceratopteris cryptic species with different polyploidy levels is a challenge because Ceratopteris spp.exhibit high degrees of phenotypic plasticity.Here,two new cryptic species of Ceratopteris,Ceratopteris chunii and Ceratopteris chingii,are described and illustrated.Ph...     

Genetic Structure of the Red-spotted Tokay Gecko,Gekko gecko(Linnaeus, 1758)(Squamata: Gekkonidae) from Mainland Southeast Asia

This study was performed to explore the genetic diversity and genetic structure of red-spotted tokay geckos(Gekko gecko) from 23 different geographical areas in Thailand, Lao PDR and Cambodia. The mitochondrial tRNAGln/tRNA-Met/partial NADH dehydrogenase subunit 2 from 166 specimens was amplified and sequenced. A total of 54 different haplotypes were found. Highly significant genetic differences occurred between populations from different localities. The haplotype network revealed six major haplogroups(G1 to G6) belonging to different clades(clade A–E). Clade D and clade E were newly observed in this study. Haplogroup G4(clade D) was a sympatric population with haplogroup G1(clade B). The populations from northern Thailand were divided into two distinct haplogroups separated by mountain range. Genetic structure and genetic differentiation of the tokay in Southeast Asia was related to the geographical region sampled, spatial distance and natural barriers. Our results indicate that red-spotted tokay geckos from mainland Southeast Asia are cryptically diverse. Morphological comparisons, in addition to an intensive genetic investigation covering the whole species range, are needed to clarify the systematic and population structure of this species group.     

Leaf hydraulics coordinated with leaf economics and leaf size in mangrove species along a salinity gradientOA

Independence among leaf economics,leaf hydraulics and leaf size confers plants great capability in adapting to heterogeneous environments.However,it remains unclear whether the independence of the leaf traits revealed across species still holds within species,especially under stressed conditions.Here,a suite of traits in these dimensions were measured in leaves and roots of a typical mangrove species,Ceriops tagal,which grows in habitats with a similar sunny and hot environment but different soi...     

The identity of Dinochloa species and enumeration of Melocalamus(Poaceae:Bambusoideae) in ChinaOA

Three woody bamboo species collected in Hainan,China in 1940 have been described as Dinochloa based on vegetative specimens.However,the identity of these species has long been in doubt,largely because the vegetative phase in species of Dinochloa is morphologically similar to that in species of Melocalamus,a climbing or scrambling bamboo genus of the paleotropical woody bamboos(Poaceae:Bambusoideae)that consists of about 15 species and one variety.To determine the phylogenetic affinity of the thr...     

粤东的红树林

Rhizophora stylosa, Heritiera littoralis and Lumnitzera racemosa are the new records of geographical distribution of the mangrove floristic composition in the coast district of east Guangdong. In the mangrove of this coast district, there are 13 families, 20 genera, 20 species, making up 24% of the total species of mangrove of the world, ess than Hainan Island but almost equal to west Guangdong. It shows the physiognomy and structure of shrubland and forest. According to the floristiccomposition, physiognomy, structure and characteristics of habitat, it may be divided into two types: beach-mangrove and coast-semi-mangrove and seven formations.The distribution of angrove in the coast of east Guangdong indicates the situation of the mangrove of this district in the geographical distribution of mangrove in the world and the tropical character of vegetation and the transition of vegetation from tropics to subtropics in this district.     

会议报道:北京生物入侵国际研讨会:2004年6月6日-11日

Scientists and policy-makers are now well aware of the ecological and societal problems associated with the introduction of species by humans across natural barriers to dispersal. Some introduced species spread abundantly in their new habitats and have negative effects on existing species, both agricultural and natural. Such introduced,invasive species can alter fire, nutrient, and hydrological regimes and have large economic costs.     

Plastid phylogenomics and species discrimination in the "Chinese" clade of Roscoea(Zingiberaceae)OA

Roscoea is an alpine or subalpine genus from the pan-tropical family Zingiberaceae,which consists of two disjunct groups in geography,namely the "Chinese" clade and the "Himalayan" clade.Despite extensive research on the genus,Roscoea species remain poorly defined and relationships between these species are not well resolved.In this study,we used plastid genomes of nine species and one variety to resolve phylogenetic relationships within the "Chinese" clade of Roscoea and as DNA super barcodes f...     

Genetic Relationships Among Five Basic Genomes St, E, A, B and D in Triticeae Revealed by Genomic Southern and in situ Hybridization

The St and E are two important basic genomes in the perennial tribe Triticeae （Poaceae）. They exist in many perennial species and are very closely related to the A, B and D genomes of bread wheat （Triticum aestivum L.）. Genomic Southern hybridization and genomic in situ hybridization （GISH） were used to analyze the genomic relationships between the two genomes （St and E） and the three basic genomes （A, B and D） of T. aestivum. The semi-quantitative analysis of the Southern hybridization suggested that both St and E genomes are most closely related to the D genome, then the A genome, and relatively distant to the B genome. GISH analysis using St and E genomic DNA as probes further confirmed the conclusion. St and E are the two basic genomes of Thinopyrum ponticum （StStE^eE^bE^x） and Th. intermedium （StE^eE^b）, two perennial species successfully used in wheat improvement. Therefore, this paper provides a possible answer as to why most of the spontaneous wheat-Thinopyrum translocations and substitutions usually happen in the D genome, some in the A genome and rarely in the B genome. This would develop further use of alien species for wheat improvement, especially those containing St or E in their genome components.     

Creation of the technique of interspecific hybridization for breeding in cotton

The new technique of interspecific hybridization was created in Gossypium, which could remarkably overcome abortion of interspecific hybridization and hybrid sterility of F1. A large number of germplasm resources were obtained from seventy cross combinations among the cultivated species and between the cultivated and the 14 wild species, respectively. 8 varieties have been developed, of which 4 were from the cross combination of G. hirsutumXG. arboretum and the other are the first breed from the hybrids between G. hirsutum and 4 wild species, respectively. Of them Shiyuan 321 (jimian 24) is a new variety which had the highest increase in the national Yellow River Valley Regional test, with planting area added up to 933333 ha in the recent three years. The breeding system of interspecific hybridization was established.     

Relative importance of long‐term changes in climate and land‐use on the phenology and abundance of legume crop specialist and generalist aphids

Abstract Insect populations are prone to respond to global changes through shifts in phenology, distribution and abundance. However, global changes cover several factors such as climate and land-use, the relative importance of these being largely unknown. Here, we aim at disentangling the effects of climate, land-use, and geographical drivers on aphid abundance and phenology in France, at a regional scale and over the last 40 years. We used aerial data obtained from suction traps between 1978 and 2015 on five aphid species varying in their degree of specialization to legumes, along with climate, legume crop area and geographical data. Effects of environmental and geographical variables on aphid annual abundance and spring migration dates were analyzed using generalized linear mixed models. We found that within the last four decades, aphids have advanced their spring migration by a month, mostly due to the increase in temperature early in the year, and their abundance decreased by half on average, presumably in response to a combination of factors. The influence of legume crop area decreased with the degree of specialization of the aphid species to such crops. The effect of geographical variation was high even when controlling for environmental variables, suggesting that many other spatially structured processes act on aphid population characteristics. Multifactorial analyses helped to partition the effects of different global change drivers. Climate and land-use changes have strong effects on aphid populations, with important implications for future agriculture. Additionally, trait-based response variation could have major consequences at the community scale.     

Distribution and conservation of near threatened plants in ChinaOA

Plants classified as Near Threatened(NT) are at high risk of becoming threatened because of anthropogenic interference and climate change.Especially in conservation efforts,such species have however long been overlooked.Here,we obtained 98,419 precise occurrence points for 2442 NT plants in China,and used species richness,species complementarity,and weighted endemism that consider all,endemic and narrow-ranged species in order to identify the diversity hotspots of NT plants.Then we evaluated the...     

Insights into cryptic speciation of quillworts in ChinaOA

Cryptic species are commonly misidentified because of high morphological similarities to other species.One group of plants that may harbor large numbers of cryptic species is the quillworts(Iso?tes spp.),an ancient aquatic plant lineage.Although over 350 species of Iso?tes have been reported globally,only ten species have been recorded in China.The aim of this study is to better understand Iso?tes species diversity in China.For this purpose,we systematically explored the phylogeny and evolution ...     

Distribution of gamasid mites on small mammals in Yunnan Province, China

An investigation of gamasid mites on the body surface of small mammals was carried out in Yunnan Province of China from 1990 to 2004. The small mammal hosts were captured from 25 counties which represent five geographical subregions, namely Middle Subregion of Hengduan Mountains, Southern Subregion of Hengduan Mountains, Eastern Plateau Subregion of Yunnan, Western Plateau Subregion of Yunnan and Southern Moun- tainous Subregion of Yunnan. The captured 10 803 small mammal hosts belong to nine families, 29 genera and 52 species in four orders （Rodentia, Insectivora, Scandentia and Lagomorpha）. A total of 68 571 gamasid mites were collected from the body surface of the captured small mammal hosts and all the gamasid mites were identified to 10 families, 33 genera and 112 species. This paper lists all the mite species, together with their taxonomic position （genera and families） and their corresponding hosts. Much more mite species were found in the Middle Subregion of Hengduan Mountains than in other geographical subregions. The total individuals of mites and small mammals in the Middle Subregion of Hengduan Mountains are also the most plentiful in the five geographical subregions. Three dominant mite species and three dominant small mammal hosts were determined as the dominant species in the investigated areas of Yunnan Province. The dominant hosts are Rattus flavipectus （which accounts for 34.85% of the total individuals）, Apodemus chevrieri （13.43%） and Rattus norvegicus （10.40%） while the dominant gamasid mite species are Laelaps nuttalli （Hirst, 1915） （27.84%）, Laelaps echidninus （Berlese, 1887） （18.38%） and Laelaps guizhouensis （Gu et Wang, 1981） （14.79%）. The results showed the high species diversity of gamasid mites in Yunnan Province and the uneven distribution feature in different subregions.     

Geographical Distribution and Morphological Variability of the Rapid Racerunner,Eremias velox (Pallas,1771)(Reptilia,Lacertidae) in the Eastern Periphery of Its Range

Phenotypic traits are usually correlated with the environment where organism occurs. In this study, the distribution of Eremias velox in the eastern periphery of its range was specified, and its morphological variation was analyzed. Linear dimensions, pholidosis, coloration and pattern features were compared among 135 specimens from nine populations inhabiting the Balkhash, Ili and Alakol basins, Junggar and Turpan depressions in the territory of Southeast Kazakhstan and Xinjiang, Northwest China. The populations from the Junggar Depression(Kuytun, Shihezi and Urumqi) were characterized by higher mean values of linear characters, the number of scales across the middle of the body and gular, and were similar in the dominant coloration patterns. Small size, dark coloration and almost complete dominance of the striped-type coloration pattern among the specimens from the Alakol Lake islands seem to have an adaptive significance associated with the isolation of the population and type of their habitats. The subspecies Eremias velox roborowskii(endemic to the Turpan Depression) is elevated to species level, as supported by morphological divergence congruent with molecular and geographical data, including its peculiar type of coloration pattern, significantly lower amount of femoral pores and a higher percentage of specimens with one enlarged preanal scale(72.7%). These results together confirm a high degree of variability in morphology for E. veloх in the eastern periphery of its range, reflecting a complex orography and the existence of multiple geographical barriers in this territory.     

Phylogeography and Cryptic Species Diversity of Paramesotriton caudopunctatus Species Group(Salamandridae: Paramesotriton) in Guizhou,China

The Paramesotriton caudopunctatus species group is mainly distributed in the karst mountain ecosystems of Guizhou, China. Although some species have been included in previous phylogenetic studies, the evolutionary relationships and divergence-time of members of this species group as a whole remain unexplored. In this study, we report the sequencing of one protein coding mitochondrial gene fragment(ND2) and one nuclear gene(POMC), and use a combination of phylogenetic analyses and coalescent simulations to explore the cryptic diversity and evolutionary history of the P. caudopunctatus species group. Phylogenetic relationships revealed that the P. caudopunctatus species group is composed of two major groups, i. e., East Clade and Western-South Clade. The divergence-time and ancestral area estimation suggested that the P. caudopunctatus species group likely originated in the Doupeng Mountains in Guizhou, China at 12.34 Ma(95% HPD: 8.30–14.73), and intraspecific divergence began at about 2.17 Ma(95% HPD: 1.39–2.97). This timing coincides with the orogenesis of the Miaoling Mountains during the Late Miocene to early Pleistocene. The delimitation of species in the P. caudopunctatus species group supports the existence of the currently identified species, and consensus was confirmed across methods for the existence of least to two cryptic species within what has been traditionally considered to be P. caudopunctatus species group. This study is of significance for understanding the species formation, dispersal, and diversity of the tailed amphibians in the karst mountains ecosystem of Guizhou and the role of the Miaoling Mountains as a geographical barrier to species dispersal.     

Latitudinal changes in species diversity of permafrost wetland plant communities in Great Xing’an Mountain valleys of Northeast China

Studying the changes of species diversity in plant communities along latitude gradients is important to discover the correlation between biodiversity and environmental factors. Along the main ridges of the Great Xing’an Mountains, 12 natural permafrost wetlands in the valleys were investigated from north to south. Latitudinal changes in species diversity were analyzed with regressive analysis. About 150 plant species were recorded and were found to be in the 12 permafrost wetland plant communities. Most plants belong to the Compositae or Gramineae. The number of family, genus and species increased significantly in the herb layer with decreasing latitude (P < 0.01), but decreased significantly in the shrub layer (P < 0.01). Species composition and the orders of dominant species in the plant communities by importance value changed along latitude. Latitudinal changes of α-diversity in permafrost wetland plant communities were different in the herb and shrub layers. With decreasing latitude, species richness and species diversity increased in the herb layer; but decreased in the shrub layer. The opposite patterns were found for species dominance. Species evenness in the shrub layer decreased with decreasing latitude. ?-diversity in the herb and shrub layers decreased first, and then increased, and finally decreased with increasing latitude. Species composition in the herb layer was similar among the plots at higher latitudes.     

Latitudinal changes in species diversity of permafrost wetland plant communities in Great Xing’an Mountain valleys of Northeast China

Studying the changes of species diversity in plant communities along latitude gradients is important to discover the correlation between biodiversity and environmental factors. Along the main ridges of the Great Xing’an Mountains, 12 natural permafrost wetlands in the valleys were investigated from north to south. Latitudinal changes in species diversity were analyzed with regressive analysis. About 150 plant species were recorded and were found to be in the 12 permafrost wetland plant communities. Most plants belong to the Compositae or Gramineae. The number of family, genus and species increased significantly in the herb layer with decreasing latitude (P < 0.01), but decreased significantly in the shrub layer (P < 0.01). Species composition and the orders of dominant species in the plant communities by importance value changed along latitude. Latitudinal changes of α-diversity in permafrost wetland plant communities were different in the herb and shrub layers. With decreasing latitude, species richness and species diversity increased in the herb layer; but decreased in the shrub layer. The opposite patterns were found for species dominance. Species evenness in the shrub layer decreased with decreasing latitude. ?-diversity in the herb and shrub layers decreased first, and then increased, and finally decreased with increasing latitude. Species composition in the herb layer was similar among the plots at higher latitudes.     

Intraspecific floral colour variation in three Pedicularis speciesOA

Flower constancy describes the phenomenon that pollinators tend to successively visit flowers of a single species during foraging, reducing reproductive interference in natural communities. The extent of flower constancy is largely determined by the floral traits of co-flowering species. Both higher inter-specific and lower intraspecific differences of floral traits should contribute to a higher level of flower constancy.However, previous studies mainly focused on interspecific difference, and t...