Importance of functional classification in the use of carabids for the environmental risk assessment of the GE crops and other agricultural practices

Carabids(Coleoptera:Carabidae)seem to be suitable bioindicalors of the environmental impacts of novel agrotechnologies,including deployment of the genetically engineered(GE)crops.In this article,we describe our effort to employ carabids in the environmental risk assessment(ERA).GE maize MON88017,its near-isogenic hybrid nontreated or treated with the soil insccticide chlorpyrifos,and two reference hybrids were used to compare three different ways how to utilize carabids in ERA.The analysis of abundance of all captured carabids or of the most abundant carabid specics did not disclose any differences between the treatments.The analysis based on the categories of functional traits revealed distinct fecatures of some treatments and proved suitable for ERA because it permitted field data transportability in spite of different species compositions.Our results indicate that GE maize has no detrimental environmental effecl,On the other hand,we found significant trends toward lower abundance and lower species number(including analysis of all carabid species together)in plots treated with the insecticide,and some tendencies to higher abundance and higher species number in plots sown with the reference hybrid PR38N86.Using functional group indicators alows identification of unintended changes in ecological functions of agroecosystem and comparability across geographics.We recommend data evaluation at the level of the categories of functional traits in ERA of GE crops and other agricultural practices.     

RAD-sequencing improves the genetic characterization of a threatened tree peony(Paeonia ludlowii) endemic to China:Implications for conservationOA

Compared with traditional genetic markers,genomic approaches have proved valuable to the conservation of endangered species.Paeonia ludlowii having rarely and pure yellow flowers,is one of the world’s most famous tree peonies.However,only several wild populations remain in the Yarlung Zangbo Valley(Nyingchi and Shannan regions,Xizang) in China due to increasing anthropogenic impact on the natural habitats.We used genome-wide single nucleotide polymorphisms to elucidate the spatial pattern of gen...     

Evaluating the Phylogenetic Position of Chinese Tree Shrew （Tupaia belangeri chinensis） Based on Complete Mitochondrial Genome： Implication for Using Tree Shrew as an Alternative Experimental Animal to Primates in Biomedical Research

Tree shrew(Tupaia belangeri) is currently placed in Order Scandentia and has a wide distribution in Southeast Asia and Southwest China.Due to its unique characteristics,such as small body size,high brain-to-body mass ratio,short reproductive cycle and life span,and low-cost of maintenance,tree shrew has been proposed to be an alternative experimental animal to primates in biomedical research.However,there are some debates regarding the exact phylogenetic affinity of tree shrew to primates.In this study,we determined the mtDNA entire genomes of three Chinese tree shrews(T.belangeri chinensis) and one Malayan flying lemur(Galeopterus variegatus).Combined with the published data for species in Euarchonta,we intended to discern the phylogenetic relationship among representative species of Dermoptera,Scandentia and Primates.The mtDNA genomes of Chinese tree shrews and Malayan flying lemur shared similar gene organization and structure with those of other mammals.Phylogenetic analysis based on 12 concatenated mitochondrial proteinencoding genes revealed a closer relationship between species of Scandentia and Glires,whereas species of Dermoptera were clustered with Primates.This pattern was consistent with previously reported phylogeny based on mtDNA data,but differed from the one reconstructed on the basis of nuclear genes.Our result suggested that the matrilineal affinity of tree shrew to primates may not be as close as we had thought.The ongoing project for sequencing the entire genome of Chinese tree shrew will provide more information to clarify this important issue.     

Species Abundance in a Forest Community in South China: A Case of Poisson Lognormal Distribution

Case studies on Poisson lognormal distribution of species abundance have been rare, especially in forest communities. We propose a numerical method to fit the Poisson lognormal to the species abundance data at an evergreen mixed forest in the Dinghushan Biosphere Reserve, South China. Plants in the tree, shrub and herb layers in 25 quadrats of 20 m×20 m, 5 m×5 m, and 1 m×1 m were surveyed. Results indicated that: (i) for each layer, the observed species abundance with a similarly small median, mode, and a variance larger than the mean was reverse J-shaped and followed well the zero-truncated Poisson lognormal;(ii) the coefficient of variation, skewness and kurtosis of abundance, and two Poisson lognormal parameters (σ andμ) for shrub layer were closer to those for the herb layer than those for the tree layer; and (iii) from the tree to the shrub to the herb layer, the σ and the coefficient of variation decreased, whereas diversity increased. We suggest that: (i) the species abundance distributions in the three layers reflects the overall community characteristics; (ii) the Poisson lognormal can describe the species abundance distribution in diverse communities with a few abundant species but many rare species; and (iii) 1/σ should be an alternative measure of diversity.     

Wind-dispersed seeds blur phylogeographic breaks:The complex evolutionary history of Populus lasiocarpa around the Sichuan BasinOA

The strength of phylogeographic breaks can vary among species in the same area despite being subject to the same geological and climate history due to differences in biological traits.Several important phylogeographic breaks exist around the Sichuan Basin in Southwest China but few studies have focused on wind-dispersed plants.Here,we investigated the phylogeographic patterns and the evolutionary history of Populus lasiocarpa,a wind-pollinated and wind-dispersed tree species with a circum-Sichua...     

Spatio-temporal dynamics of two alpine treeline ecotones and ecological characteristics of their dominate species at the eastern margin of Qinghai-Xizang Plateau北大核心CSCD

Aims Temperature limit is the main cause of alpine treeline formation. Therefore, it is important to understand the response mechanisms of alpine treeline as well as their tree species under the global climate change. The present study focused on the spatio-temporal dynamics of treeline and ecological characteristics of the tree species in two treeline ecotones. Methods Two vertical belt-transect plots were established in each treeline ecotone of the Zheduo Mountain and Jianziwan Mountain of the eastern Qinghai-Xizang Plateau. Top and bottom of each transects were lain between species line and forest line, respectively. Detailed information of each tree species treeline, including species name, latitude, longitude, height, age, base diameter, and coordinates, was recorded accordingly. Important findings The temperatures of the two research areas have increased during the past 58 years. The precipitation has decreased slightly in both the Zheduo Mountain and Jianziwan Mountain. The age structure of Abies fabri from the Zheduo Mountain and A. squamata from the Jianziwan Mountain showed a reversed “J” shape curve and a bimodal shape, respectively. Within the two transects, due to the limitation of seed diffusion, the dominate species showed aggregated distributions at the small scale. At the large scale, A. fabri was aggregated at the Zheduo Mountain, while A. squanmata of the Jianziwan Mountain was randomly distributed due to the impact of surrounding environmental factors. Both tree height and base diameter decreased with the increase of elevation. The fir trees (Abies spp.) at the upper part of the treeline ecotone presented an allometric growth, whose height growth rate was higher than that of base growth, while the relationships between height growth and base growth were isometric at almost mid and lower part of the treeline ecotone. Compared with 10 years ago, there was no significant change at the position of treeline and tree species line of the Zheduo Mountain and the Jianziwan Mountain, neither of the tree density in the Jianziwan Mountain. However, the number of trees in the Zheduo Mountain increased by about 25%. Compared with 20 years ago, tree species lines of the Zheduo Mountain and Jianziwan Mountain were shifted upwards by 50 and 30 m, respectively. Besides, their treeline positions were increased by 75 and 40 m, respectively. Furthermore, the number of trees also increased significantly by 220% and 100%, respectively. Therefore, the treeline and its constructive species are mainly affected by temperature at the large spatio-temporal scale, while influenced by temperature and ambient environment at the small spatio-temporal scale. © Chinese Journal of Plant Ecology.     

Carbon storage and potentials of the broad-leaved forest in alpine region of the Qinghai-Xizang Plateau,China北大核心CSCD

Aims Our objective was to explore the vegetation carbon storages and their variations in the broad-leaved forests in the alpine region of the Qinghai-Xizang Plateau that includes Qinghai Province and Xizang Autonomous Region. Methods Based on forest resource inventory data and field sampling, this paper studied the carbon storage, its sequestration rate, and the potentials in the broad-leaved forests in the alpine region of the Qinghai-Xizang Plateau. Important findings The vegetation carbon storage in the broad-leaved forest accounted for 310.70 Tg in 2011, with the highest value in the broad-leaved mixed forest and the lowest in Populus forest among the six broad-leaved forests that include Quercus, Betula, Populus, other hard broad-leaved species, other soft broad-leaved species, and the broadleaved mixed forest. The carbon density of the broad-leaved forest was 89.04 Mg•hm2, with the highest value in other hard broad-leaved species forest and the lowest in other soft broad-leaved species forest. The carbon storage and carbon density in different layers of the forests followed a sequence of overstory layer > understory layer > litter layer > grass layer > dead wood layer, which all increased with forest age. In addition, the carbon storage of broad-leaved forest increased from 304.26 Tg in 2001 to 310.70 Tg in 2011. The mean annual carbon sequestration and its rate were 0.64 Tg•a1 and 0.19 Mg•hm2•a1, respectively. The maximum and minimum of the carbon sequestration rate were respectively found in other soft broad-leaved species forest and other hard broad-leaved species forest, with the highest value in the mature forest and the lowest in the young forest. Moreover, the carbon sequestration potential in the tree layer of broad-leaved forest reached 19.09 Mg•hm2 in 2011, with the highest value found in Quercus forest and the lowest in Betula forest. The carbon storage increased gradually during three inventory periods, indicating that the broad-leaved forest was well protected to maintain a healthy growth by the forest protection project of Qinghai Province and Xizang Autonomous Region.     

Resolution of phylogenetic relationships of the major subfamilies of the Delphacidae （Homoptera： Fulgoroidea） using the mitochondrial ribosomal DNA

Delphacid relationships from the genus level to the subfamily have been completely resolved （among those taxa examined） using sequence data from the 3＇ end of the 12S gene. Monophyly of the non-asiracine subfamilies was strongly supported and the asiracine Ugyops was placed in the most basal position of the tree. Support levels for monophyly of the Delphacini increased after weighting transversions more heavily than transitions and after removing the cixiid outgroup from the dataset. Among the Delphacini, Conomelus and Megamelus were more closely related to each other than either was to Chloriona. These results are in agreement with the tree based on morphological characters. However, in contrast to morphological data our results strongly supported a sister group relationship between the Stenocraninae and the Kelisiinae. Although the 12S gene fragment gave some information about the species relationships within Chloriona, neither this fragment nor the 5＇ end of the 16S gene appear to be very useful for this level. Molecular evolutionary patterns provided evidence that there has been a shift in base composition from T to A during the early evolution of the non-Asiracinae. The non-Asiracinae also had comparatively fast substitution rates and these two observations are possibly correlated. In the ‘ modem＇ delphacid Chloriona, the AT content was comparatively low in regions free of constraints but this was not the case for ‘ non-modem＇ delphacids. The tRNA for valine has been translocated elsewhere, probably before the Delphacidae and Cixiidae diverged from each other.     

Characteristics and underlying mechanisms of plant deep soil water uptake and utilization: Implication for the cultivation of plantation trees北大核心CSCD

Root water uptake is an essential part of tree water relations and plays a crucial role in tree physiological activities. Water resource in deep soil is relatively abundant and can provide plenty of water to trees to guarantee their survival and healthy growth during dry seasons. Thus, a good comprehension of the characteristics and underlying mechanisms of deep soil water uptake and utilization by trees will deepen the understanding of the interaction between trees and the environment, tree survival and growth strategies, coexistence and competition among different species, etc. This knowledge is important in establishing green cultivation schemes for plantations, which depend less on the external water resources input and avoid the adverse effects on the water ecological environment. From existing studies, the characteristics and underlying mechanisms of deep water uptake and utilization by trees are reviewed. Firstly, the definition of deep roots and deep soil is discussed, and 1 m depth is recommended as the average (reference) definition standard in main forest vegetation types except the boreal forest. The reasons for the formation of deep tree roots around the globe were also determined. Secondly, the observed deep soil water uptake characteristics of trees and their influencing factors are summarized. Then, from the aspects of the adjustment of deep root traits and the coordination of hydraulic traits of different organs, the mechanisms of deep water uptake by trees are discussed. For example, the spatial, temporal and efficiency adjustment strategies of deep roots can be used to facilitate the absorption of deep soil water. Finally, some implications of deep soil water uptake for the cultivation of plantations are proposed, such as “for water management in plantations, trees should be induced to moderately utilize some deep soil water and an appropriate irrigation frequency should be selected”, “appropriate mixed planting of different tree species can facilitate the buffering effect of deep soil water storage”, “developing techniques of selecting trees for thinning based on the water uptake depths of different species”, etc. Deficiencies of existing studies and some future research directions were also pointed out. © 2018 Editorial Office of Chinese Journal of Plant Ecology. All Rights Reserved.     

Analysis of forestry impacts and biodiversity in two Pyrenean forests through a comparison of moth communities （Lepidoptera, Heterocera）

We have compared the biodiversity variations in moth communities between unmanaged forests and commercial forests in a mountainous environment （Pyrenees France）. The aim was to evaluate the impact of forestry activities on moth diversity. The data collected from the insects were analysed with a Bayesian specific similarity index （noted SSP index） and by statistical biodiversity indexes comparison. It was seen that diversity and richness were decreased in the plantation compared to the unmanaged forest. Interestingly, the composition of the communities of moths was shown to be not only related to the presence/absence of host plants, but also to be in relation with changes in the differences in forest architecture （i.e. the relative coverage by the different vegetation levels）. However, the moth community in the commercial forest still has a high capacity to converge with the moth community present in more natural forests. We report here a list of 177 species of moths, providing information on the distribution of some uncommon species, poorly studied as yet in the Pyrenees.     

Phenology of high-arctic butterflies and their floral resources： Species-specific responses to climate change

Current global warming is particularly pronounced in the Arctic and arthropods are expected to respond rapidly to these changes. Long-term studies of individual arthropod species from the Arctic are, however, virtually absent. We examined butterfly specimens collected from yellow pitfall traps over 14 years （1996-2009） at Zackenberg in high-arctic, north-east Greenland. Specimens were previously sorted to the family level. We identified them to the species level and examined long-term species-specific phenological responses to recent summer wanning. Two species were rare in the samples （Polaris fritillary Boloria polaris and Arctic blue Plebejus glandon） and statistical analyses of phenological responses were therefore restricted to the two most abundant species （Arctic fritillary, B. chariclea and Northern clouded yellow Colias hecla）. Our analyses demonstrated a trend towards earlier flight seasons in B. chariclea, but not in C. hecla. The timing of onset, peak and end of the flight season in B. chariclea were closely related to snowmelt, July temperature and their interaction, whereas onset, peak and end of the flight season in C. hecla were only related to timing of snowmelt. The duration of the butterfly flight season was significantly positively related to the temporal overlap with floral resources in both butterfly species. We further demonstrate that yellow pitfall traps are a useful alternative to transect walks for butterfly recording in tundra habitats. More phenological studies of Arctic arthropods should be carded out at the species level and ideally be analysed in context with interacting species to assess how ongoing climate change will affect Arctic biodiversity in the near future [Current Zoology 60 （2）： 243-251, 2014].     

Differences in Incubation Length and Hatchling Morphology among Five Species of Oviparous Phrynocephalus Lizards （Agamidae） from China

We incubated eggs of five Phrynocephalus species （P. albolineatus, P. axillaries, P. grumgrzimailoi, P. helioscopus and P. przewalskii） at three constant temperatures （24℃, 28℃ and 32℃） to examine differences in incubation length and hatchling morphology among species and among temperature treatments. We combined data from this study with those reported previously for P. frontalis and P. versicolor to examine whether embryonic stage at laying is a causal factor for interspecific variation in incubation length, and whether the phylogenetic relationship inferred from hatchling morphology is consistent with the relationship based on mitochondrial DNA data. Mean values for incubation length differed among the five species studied herein and, in all these five species, incubation length decreased at a decreasing rate as temperature increased. In none of the five species did hatchling size （snout-vent length and body mass） and other morphological variables differ among the three temperature treatments. The seven oviparous Phrynocephalus lizards found in China differ from each other in hatchling morphology, and embryonic stage at laying is a causal factor of inter- and intra-specific variation in incubation length. The phylogenetic relationship inferred from hatchling morphology is not always consistent with the currently known relationship based on mitochondrial DNA data. Data from this study and those reported previously allow the conclusion that any Phrynocephalus species may have its unique position along the axis defined by hatchling morphology.     

Analysis of Grassland Vegetation of the Southwest Heilongjiang Steppe （China） Using the Power Law

In 1997, we conducted a vegetation survey in three semi-arid natural grasslands （steppes） with different livestock grazing intensities in Southwest Heilongjiang Province, China, The dominant grassland species was the grass Stipa baicalensis Roshev. Grasslands with light, intermediate, and heavy grazing intensities were located 10, 5, and 2 km from a village, respectively. Villagers use the steppe to raise cattle, horses, sheep, and goats. Each of the three grasslands was surveyed by placing 100 quadrats （50 cm×50 cm） along a 50 m line transect. Each quadrat was divided into four equal areas （25 cm×25 cm; S-quadrats） and all plant species occurring in each of these smaller areas were identified and recorded. These data were summarized into frequency distributions and the percentage of S-quadrats containing a given species and the variance of each species were estimated. The power law was applied to these estimates. The power law was used to evaluate the spatial heterogeneity and frequency of occurrence for each species in the grassland community. The lightly grazed grassland exhibited high spatial heterogeneity （caused by large plant size）, the highest species diversity, and a high occurrence of S. baicalensis. In contrast, the heavily grazed grassland exhibited high spatial heterogeneity （caused by patchy populations of small plant size）, low species diversity, and a low occurrence of S. baicalensis. We judged that the heavily grazed grassland was overgrazed and exclusion of livestock from the degraded areas is necessary for recovery.     

Evaluation of different models to describe egg and pupal development of Xyleborus fornicatus Eichh, （Coleoptera： Scolytidae）, the shot-hole borer of tea in Sri Lanka

Development data of eggs and pupae ofXyleborusfornicatus Eichh. （Coleoptera： Scolytidae）, the shot-hole borer of tea in Sri Lanka, at constant temperatures were used to evaluate a linear and seven nonlinear models for insect development. Model evaluation was based on fit to data （residual sum of squares and coefficient of determination or coefficient of nonlinear regression）, number of measurable parameters, the biological value of the fitted coefficients and accuracy in the estimation of thresholds. Of the nonlinear models, the Lactin model fitted experimental data well and along with the linear model, can be used to describe the temperature-dependent development of this species.     

Variations and interrelationships of foliar hydraulic and photosynthetic traits for Larix gmelinii北大核心CSCD

Aims: Variations and potential trade-offs of leaf hydraulic and photosynthetic traits are essential for assessing and predicting the effect of climate change on tree survival, growth and distribution. Our aims were to examine variations and interrelationships of leaf hydraulic and photosynthetic traits in response to changes in site conditions for Dahurian larch (Larix gmelinii)-a dominant tree species in Chinese boreal forests. Methods: This study was conducted at the Maoershan Forest Ecosystem Research Station. A transect of 27 year-old Dahurian larch plantation was established that consisted of five plots extending from the valley to the ridge of a slope. The predawn leaf water potential (ψpre), area- and mass-based leaf hydraulic conductance (Karea and Kmass, respectively), resistance to embolism capacity (P50), leaf mass per area (LMA), net photosynthetic rate (A), and leaf nitrogen content (N) were measured in August 2016. Important findings: The ψpre, Karea, Kmass, P50, A, LMA, and N all varied significantly among the plots (p < 0.05), indicating significant intra-specific variations in these traits in response to the changes in site conditions. The P50 was significantly (p < 0.05) correlated with ψpre, Karea or Kmass, suggesting that a trade-off between hydraulic efficiency and safety exist within the species to some degree. There were significant (p < 0.05) pairwise correlations between A, LMA, and N. Nevertheless, there was no significant (p < 0.05) correlation between the measured photosynthetic traits and hydraulic traits. We concluded that the intra-specific variations and multiple interrelationships of the leaf hydraulic and photosynthetic traits for the larch reflect the plasticity of its leaf traits and strategies of its survival and growth as a result of its acclimation to diverse site conditions.     

Evidence for two types of Aquilegia ecalcarata and its implications for adaptation to new environmentsOA

Spurs have played an important role in the radiation of the genus Aquilegia,but little is known about how the spurless state arose in A.ecalcarata.Here we aim to characterize the genetic divergence within A.ecalcarata and gain insights into the origin of this species.A total of 19 populations from A.ecalcarata and 23 populations from three of its closest relatives(Aquilegia kansuensis,Aquilegia rockii and Aquilegia yabeana) were sampled in this study.We sequenced fifteen nuclear gene fragments a...     

Environmental Suitability and Distribution of the Caucasian Rock Agama, Paralaudakia caucasia （Sauria： Agamidae） in Western and Central Asia

Predictive potential distribution modeling is crucial in outlining habitat usage and establishing conservation management priorities. In this paper we provide detailed data on the distribution of the Caucasian rock agama Para- laudakia caucasia, and use species distribution models （MAXENT） to evaluate environmental suitability and potential distribution at a broad spatial scale. Locality data on the distribution of P. caucasia have been gathered over nearly its entire range by various authors from field surveys. The distribution model ofP caucasia showed good performance （AUC = 0.887）, and predicted high suitability in regions mainly located in Tajikistan, north Pakistan, Afghanistan, southeast Turkmenistan, northeast Iran along the Elburz mountains, Transcaueasus （Azerbajan, Armenia, Georgia）, northeastern Turkey and northward along the Caspian Sea coast in Daghestan, Russia. The identification of suitable areas for this species will help to assess conservation status of the species, and to set up management programs.     

Current stocks and potential of carbon sequestration of the forest tree layer in Qinghai Province,China北大核心CSCD

Aims Our objective was to estimate the carbon storage in the forest tree layer in Qinghai Province, China. Methods Based on forest resource inventory data and field investigation data, we estimated the carbon storage, sequestration rate and potentials in the forest tree layer in the Qinghai Province. Important findings The carbon density and total carbon storage of forest tree layer in Qinghai Province was 76.54 Mg·hm-2 and 27.38 Tg, respectively, of which four forest types (Picea spp. forest, Cupressus funebris forest, Betula spp. forest and Populus spp. forest) accounted for 86.67% while their areas were 96.23% of total forest areas in Qinghai. The carbon density and carbon storage of Picea spp. forest was 106.93 Mg·hm-2 and 14.78 Tg, respectively, which was the largest among all forest types. The carbon storage of the forest tree layer at different stand ages followed the sequence of over-mature forest > middle-aged forest > mature forest > near-mature forest > young forest. In addition, the carbon storage of forest tree layer in the province increased from 23.30 Tg in 2003 to 27.38 Tg in 2011. The average annual growth of carbon and carbon sequestration rate were 0.51 Tg and 1.06 Mg·hm-2·a-1, respectively. The maximum and minimum of carbon sequestration rate were respectively found in Cupressus funebris forest (0.44 Mg·hm-2·a-1) and Betula spp. forest (-1.06 Mg·hm-2·a-1). The mean carbon sequestration potential reached 8.50 Tg in 2011, with the highest value found in Picea spp. forest (3.40 Tg). These findings suggested high carbon sequestration potential of forest tree layer in Qinghai Province. Therefore, the carbon storage in Qinghai Province could be increased through better forest management and utilization. © 2018 Editorial Office of Chinese Journal of Plant Ecology. All rights reserved.     

Intercontinental comparison of phylogenetic relatedness in introduced plants at the transition from naturalization to invasion:A case study on the floras of South Africa and ChinaOA

Invasive species may pose significant threats to biodiversity and ecosystem structure and functioning.The number of introduced species that have become invasive is substantial and is rapidly increasing.Identifying potentially invasive species and preventing their expansion are of critical importance in invasion ecology.Phylogenetic relatedness between invasive and native species has been used in predicting invasion success.Previous studies on the phylogenetic relatedness of plants at the transit...     

Are allometric model parameters of aboveground biomass for trees phylogenetically constrained?OA

Knowledge of which biological and functional traits have,or lack,phylogenetic signal in a particular group of organisms is important to understanding the formation and functioning of biological communities.Allometric biomass models reflecting tree growth characteristics are commonly used to predict forest biomass.However,few studies have examined whether model parameters are constrained by phylogeny.Here,we use a comprehensive database(including 276 tree species) compiled from 894 allometric bio...