GUIDE FOR AUTHORSOA

<正>Introduction Types of paper Contributions falling into the following categories will be considered for publication:original articles,review articles,short letters,modelling/theory and methods articles,rapid reports and special thematic issues.Please ensure that you select the appropriate article type from the list of options when making your submission.Authors contributing to special issues should ensure that they select the special issue article type from this list.     

GUIDE FOR AUTHORSOA

<正>Introduction Types of paper Contributions falling into the following categories will be considered for publication:original articles,review articles,short letters,modelling/theory and methods articles,rapid reports and special thematic issues.Please ensure that you select the appropriate article type from the list of options when making your submission.Authors contributing to special issues should ensure that they select the special issue article type from this list.     

Distribution and conservation of near threatened plants in ChinaOA

Plants classified as Near Threatened(NT) are at high risk of becoming threatened because of anthropogenic interference and climate change.Especially in conservation efforts,such species have however long been overlooked.Here,we obtained 98,419 precise occurrence points for 2442 NT plants in China,and used species richness,species complementarity,and weighted endemism that consider all,endemic and narrow-ranged species in order to identify the diversity hotspots of NT plants.Then we evaluated the...     

Insights into cryptic speciation of quillworts in ChinaOA

Cryptic species are commonly misidentified because of high morphological similarities to other species.One group of plants that may harbor large numbers of cryptic species is the quillworts(Iso?tes spp.),an ancient aquatic plant lineage.Although over 350 species of Iso?tes have been reported globally,only ten species have been recorded in China.The aim of this study is to better understand Iso?tes species diversity in China.For this purpose,we systematically explored the phylogeny and evolution ...     

Siwalik plant megafossil diversity in the Eastern Himalayas:A reviewOA

The Eastern Himalayas are renowned for their high plant diversity.To understand how this modern botanical richness formed,it is critical to investigate past plant biodiversity preserved as fossils throughout the eastern Himalayan Siwalik succession(middle Miocene-early Pleistocene).Here,we present a summary of plant diversity records that document Neogene floristic and climate changes.We do this by compiling published records of megafossil plant remains,because these offer better spatial and tem...     

Global patterns of taxonomic and phylogenetic diversity of flowering plants:Biodiversity hotspots and coldspotsOA

Species diversity of angiosperms(flowering plants) varies greatly among regions.Geographic patterns of variation in species diversity are shaped by the interplay of ecological and evolutionary processes.Here,using a comprehensive data set for regional angiosperm floras across the world,we show geographic patterns of taxonomic(species) diversity,phylogenetic diversity,phylogenetic dispersion,and phylogenetic deviation(i.e.,phylogenetic diversity after accounting for taxonomic diversity) across th...     

Phyllosphere eukaryotic microalgal communities in rainforests:Drivers and diversityOA

Phyllosphere algae are common in tropical rainforests,forming visible biofilms or spots on plant leaf surfaces.However,knowledge of phyllosphere algal diversity and the environmental factors that drive that diversity is limited.The aim of this study is to identify the environmental factors that drive phyllosphere algal community composition and diversity in rainforests.For this purpose,we used single molecule real-time sequencing of full-length 18S rDNA to characterize the composition of phyllos...     

Geographic patterns of taxonomic and phylogenetic β-diversity of aquatic angiosperms in ChinaOA

China covers a vast territory harbouring a large number of aquatic plants.Although there are many studies on the β-diversity of total,herbaceous or woody plants in China and elsewhere,few studies have focused on aquatic plants.Here,we analyse a comprehensive data set of 889 aquatic angiosperm species in China,and explore the geographic patterns and climatic correlates of total taxonomic and phylogeneticβ-diversity as well as their turnover and nestedness components.Our results show that geograph...     

The identity of Dinochloa species and enumeration of Melocalamus(Poaceae:Bambusoideae) in ChinaOA

Three woody bamboo species collected in Hainan,China in 1940 have been described as Dinochloa based on vegetative specimens.However,the identity of these species has long been in doubt,largely because the vegetative phase in species of Dinochloa is morphologically similar to that in species of Melocalamus,a climbing or scrambling bamboo genus of the paleotropical woody bamboos(Poaceae:Bambusoideae)that consists of about 15 species and one variety.To determine the phylogenetic affinity of the thr...     

Plastid phylogenomics and species discrimination in the \"Chinese\" clade of Roscoea(Zingiberaceae)OA

Roscoea is an alpine or subalpine genus from the pan-tropical family Zingiberaceae,which consists of two disjunct groups in geography,namely the \"Chinese\" clade and the \"Himalayan\" clade.Despite extensive research on the genus,Roscoea species remain poorly defined and relationships between these species are not well resolved.In this study,we used plastid genomes of nine species and one variety to resolve phylogenetic relationships within the \"Chinese\" clade of Roscoea and as DNA super barcodes f...     

New patterns of the tree beta diversity and its determinants in the largest savanna and wetland biomes of South AmericaOA

Clear and data-driven bioregionalizations can provide a framework to test hypotheses and base biodiversity conservation.Here we used occurrence and abundance data in combination with objective analytical methods to propose two bioregionalization schemes for tree species of the Cerrado and the Pantanal in South America.We also evaluated the contribution of three sets of determinants of the occurrence-and abundance-based subregions.We compiled data on tree species composition from 894local assembl...     

Molecular phylogeny and inflorescence evolution of Prunus(Rosaceae)based on RAD-seq and genome skimming analysesOA

Prunus is an economically important genus widely distributed in the temperate Northern Hemisphere.Previous studies on the genus using a variety of loci yielded conflicting phylogenetic hypotheses.Here,we generated nuclear reduced representation sequencing data and plastid genomes for 36 Prunus individuals and two outgroups.Both nuclear and plastome data recovered a well-resolved phylogeny.The species were divided into three main clades corresponding to their inflorescence types,-the racemose gro...     

Applying image clustering to phylogenetic analysis:A trialOA

<正>Phylogenetic studies have increased in recent years,largely due to rapid developments in sequencing techniques (Tucker et al.,2017).However,molecular phylogenetic studies rely on collecting biomaterials,which limits their applicability to many,especially small,rare plants,or inaccessible plants.Recently,image classification using supervised or semi-supervised approaches (Dyrmann et al.,2016;W?ldchen et al., 2018;Draper et al.,2020;     

Does pollinator dependence decrease along elevational gradients?OA

Plants have long been thought to be less dependent on pollinators for seed production at higher elevations due to adverse pollination environments.However,recent research has yet to consistently support the generality of this expectation.In this study,we asked whether pollinator dependence decreases along an elevational gradient and how it varies with various reproductive traits.To answer these questions,we quantified pollinator-plant associations and various reproductive traits for 112 flowerin...     

Honoring a legend:Celebrating the life and legacy of Professor Heng LiOA

<正>Professor Heng Li (李恒,March 9,1929-January 12,2023) was a legendary plant taxonomist and phytogeographer at the Kunming Institute of Botany,Chinese Academy of Sciences (Fig.1).She made important contributions to our understanding of China’s flora,including the biodiversity and biogeography of Dulong Valley and the Gaoligong Mountains,as well as the vegetation of plateau lakes and wetlands in Southwest China.     

Evidence of the oldest extant vascular plant(horsetails) from the Indian CenozoicOA

Equisetum(Equisetaceae) has long been a focus of attention for botanists and palaeontologists because,given its extensive and well-documented fossil record,it is considered the oldest extant vascular plant and a key element in understanding vascular plant evolution.However,to date,no authentic fossil evidence of Equisetum has been found from the Indian Cenozoic.Here,we describe a new fossil species,namely,E.siwalikum sp.nov.,recovered from the middle Siwalik(Late Miocene) sediments of Himachal P...     

Geographic patterns of taxonomic and phylogenetic β-diversity of angiosperm genera in regional floras across the worldOA

Beta diversity(β-diversity) is the scalar between local(α) and regional(γ) diversity.Understanding geographic patterns of β-diversity is central to ecology,biogeography,and conservation biology.A full understanding of the origin and maintenance of geographic patterns of β-diversity requires exploring both taxonomic and phylogenetic β-diversity,as well as their respective turnover and nestedness components,and exploring phylogenetic p-diversity at different evolutionary depths.In this study,we ex...     

Climate change impacts the distribution of Quercus section Cyclobalanopsis(Fagaceae),a keystone lineage in East Asian evergreen broadleaved forestsOA

East Asian evergreen broadleaved forests(EBFLs) harbor high species richness,but these ecosystems are severely impacted by global climate change and deforestation.Conserving and managing EBLFs requires understanding dominant tree distribution dynamics.In this study,we used 29 species in Quercus section Cyclobalanopsis—a keystone lineage in East Asian EBLFs—as proxies to predict EBLF distribution dynamics using species distribution models(SDMs).We examined climatic niche overlap,similarity,and eq...     

Drivers of the differentiation between broad-leaved trees and shrubs in the shift from evergreen to deciduous leaf habit in forests of eastern Asian subtropicsOA

In eastern Asian subtropical forests,leaf habit shifts from evergreen to deciduous broad-leaved woody plants toward higher latitudes.This shift has been largely explained by the greater capacity of deciduous broad-leaved plants to respond to harsh climatic conditions(e.g.,greater seasonality).The advantages of deciduous leaf habit over evergreen leaf habit in more seasonal climates have led us to hypothesize that leaf habits would shift in response to climate changes more conspicuously in forest...