Geographic patterns of taxonomic and phylogenetic β-diversity of aquatic angiosperms in ChinaOA

China covers a vast territory harbouring a large number of aquatic plants.Although there are many studies on the β-diversity of total,herbaceous or woody plants in China and elsewhere,few studies have focused on aquatic plants.Here,we analyse a comprehensive data set of 889 aquatic angiosperm species in China,and explore the geographic patterns and climatic correlates of total taxonomic and phylogeneticβ-diversity as well as their turnover and nestedness components.Our results show that geograph...     

Insights into cryptic speciation of quillworts in ChinaOA

Cryptic species are commonly misidentified because of high morphological similarities to other species.One group of plants that may harbor large numbers of cryptic species is the quillworts(Iso?tes spp.),an ancient aquatic plant lineage.Although over 350 species of Iso?tes have been reported globally,only ten species have been recorded in China.The aim of this study is to better understand Iso?tes species diversity in China.For this purpose,we systematically explored the phylogeny and evolution ...     

Wind-dispersed seeds blur phylogeographic breaks:The complex evolutionary history of Populus lasiocarpa around the Sichuan BasinOA

The strength of phylogeographic breaks can vary among species in the same area despite being subject to the same geological and climate history due to differences in biological traits.Several important phylogeographic breaks exist around the Sichuan Basin in Southwest China but few studies have focused on wind-dispersed plants.Here,we investigated the phylogeographic patterns and the evolutionary history of Populus lasiocarpa,a wind-pollinated and wind-dispersed tree species with a circum-Sichua...     

Global patterns of taxonomic and phylogenetic diversity of flowering plants:Biodiversity hotspots and coldspotsOA

Species diversity of angiosperms(flowering plants) varies greatly among regions.Geographic patterns of variation in species diversity are shaped by the interplay of ecological and evolutionary processes.Here,using a comprehensive data set for regional angiosperm floras across the world,we show geographic patterns of taxonomic(species) diversity,phylogenetic diversity,phylogenetic dispersion,and phylogenetic deviation(i.e.,phylogenetic diversity after accounting for taxonomic diversity) across th...     

Intercontinental comparison of phylogenetic relatedness in introduced plants at the transition from naturalization to invasion:A case study on the floras of South Africa and ChinaOA

Invasive species may pose significant threats to biodiversity and ecosystem structure and functioning.The number of introduced species that have become invasive is substantial and is rapidly increasing.Identifying potentially invasive species and preventing their expansion are of critical importance in invasion ecology.Phylogenetic relatedness between invasive and native species has been used in predicting invasion success.Previous studies on the phylogenetic relatedness of plants at the transit...     

Leaf hydraulics coordinated with leaf economics and leaf size in mangrove species along a salinity gradientOA

Independence among leaf economics,leaf hydraulics and leaf size confers plants great capability in adapting to heterogeneous environments.However,it remains unclear whether the independence of the leaf traits revealed across species still holds within species,especially under stressed conditions.Here,a suite of traits in these dimensions were measured in leaves and roots of a typical mangrove species,Ceriops tagal,which grows in habitats with a similar sunny and hot environment but different soi...     

Translocation of Otostegia bucharica,a highly threatened narrowly distributed relict shrub

Translocation is a recognized means of rescuing imperiled species but the evidence for the long-term success of translocations is limited. We report the successful translocation of reproductive individuals of a critically endangered shrub Otostegia bucharica from a site facing imminent habitat destruction into a nearby natural population of the species. The relocated plants were visited the year after planting and 13 years later to assess short-and long-term plant survival. Significant percentage of plants that survived transplanting shock and very dry spring following transplanting(around 36%), and further decrease of this number in the next 12 years by only 14%, indicated that O. bucharica is amenable to translocation using reproductive plants. Based on results of species distribution modeling, and failed attempts of ex situ cultivation, we propose introduction of this species into areas with suitable climatic and soil conditions.However, because there is currently no nature reserve in Uzbekistan having suitable conditions for the species under the present climate and that expected in the near future, and because all known habitats of O. bucharica are exposed to the very strong anthropogenic pressure, establishment of a new protected area, awareness building and involvement of local community in conservation activities are required to prevent extinction of this extremely rare species.     

New Role for an Old Rule: N-end Rule-Mediated Degradation of Ethylene Responsive Factor Proteins Governs Low Oxygen Response in Plants

The N-end rule pathway regulates protein degradation, which depends on exposed N-terminal sequences in prokaryotes and eukaryotes. In plants, conserved and specific enzymes stimulate selective proteolysis. Although a number of developmental and growth phenotypes have been reported for mutants in the N-end rule, its function has remained unrelated to specific physiological pathways. The first report of the direct involvement of the N-end rule in stress responses focused on hypoxic signaling and how the oxygen-dependent oxidation of cystein promotes the N-end rule-mediated degradation of ethylene responsive factor (ERF)-VII proteins, the master regulators of anaerobic responses. It has beensuggested that plants have evolved specific mechanisms to tune ERF-VII availability in the nucleus. In this review, we speculate that ERF-VII proteins are reversibly protected from degradation via membrane sequestration. The oxidative response in plants subjected to anoxic conditions suggests that reactive oxygen and nitrogen species (reactive oxygen species and reactive nitrogen species) may interact or interfere with the N-end rule pathway-mediated response to hypoxia.     

Sex-specific facilitation and reproduction of the gynodioecious cushion plant Arenaria polytrichoides on the Himalaya-Hengduan mountains,SW ChinaOA

When benefiting other beneficiaries, cushion plants may reciprocally receive feedback effects. The feedback effects on different sex morphs, however, remains unclear. In this study, taking the gynodioecious Arenaria polytrichiodes as a model species, we aimed to assess the sex-specific facilitation intensity of cushion plant by measuring the beneficiary cover ratio, and to assess the potential costs in cushion reproductive functions by measuring the flower and fruit cover ratios. The total benef...     

Climate change filtered out resource-acquisitive plants in a temperate grassland in Inner Mongolia,China

Global climate change has led to the decline of species and functional diversity in ecosystems,changing community composition and ecosystem functions.However,we still know little about how species with different resource-use strategies(different types of resource usage and plant growth of plants as indicated by the spectrum of plant economic traits,including acquisitive resource-use strategy and conservative resource-use strategy) would change in response to climate change,and how the changes in...     

Checklist of Wadi Hassan flora,Northeastern Badia,Jordan

In this study, we survey the plant diversity of Wadi Hassan, which is located in the Northeastern Badia of Jordan, about 120 km east of Amman. All plant species were collected and herbarium specimens have been prepared, identified and deposited at the University of Jordan herbarium(Department of Biology,Faculty of Science). The final plant checklist includes 206 species belonging to 138 genera and 35 families.The most diverse families are Compositae(20.5%), Cruciferae(10.2%), Leguminosae(8.3%) and Boraginaceae(6.8%), followed by Caryophyllaceae and Gramineae(5.4%). These six families represent 60% of the total families recognized in the study area, while nine families each are represented by only one species. Most plants recorded are annual plants(61%), some plants are hemicryptophtes(18%) and camaephytes(15%), while the least frequent life form class was the phanerophyte shrub and perennial(0.5%). Chorological characteristics of the recorded flora show that Saharo-Arabian Region elements, IranoTuranian elements and Mediterranean elements constitute(58%) of the total flora. This research shows that even small portion of the Jordan Badia such as the Wadi Hassan plant community has high species diversity. Thus, we recommended further of the unexplored Wadi plants communities of the Jordan Badia.     

Photosynthetic response dynamics in the invasive species Tithonia diversifolia and two co-occurring native shrub species under fluctuating light conditionsOA

To determine the invasiveness of invasive plants, many studies have compared photosynthetic traits or strategies between invasive and native species. However, few studies have compared the photosynthetic dynamics between invasive and native species during light fluctuations. We compared photosynthetic induction, relaxation dynamics and leaf traits between the invasive species, Tithonia diversifolia and two native species, Clerodendrum bungei and Blumea balsamifera, in full-sun and shady habitats...     

High-nitrogen and low-irradiance can restrict energy utilization in photosynthesis of successional tree species in low subtropical forest

Responses of photosynthesis and the partition of energy utilization to high-nitrogen importation and high-light intensity in leaves of three dominant tree species of subtropical forest,including sun plant or early-successional species Schima superba,mesophyte or intermediate-successional species Canstanopsis hystrix,and shading-tolerant plant or late-successional species Cryptocarya concinna were studied by using the CO2 exchange system and chlorophyll fluorescence method.Our results showed that,regardless of plant species,net photosynthetic rate(Pn)was higher in high-nitrogen supply and high irradiance(HNHL)plants than in low-nitrogen supply and high irradiance(LNHL)plants,implying that low-nitrogen importation would limit Pn of plants grown under high irradiance.However, high-nitrogen supply and low irradiance(HNLL)plants had a lower Pn.Insignificant change of quantum yield(Fv′/Fm′)in opened PS II was found in leaves of HNHL,LNHL or HNLL plants of S.superba and C. hystrix,while a higher Fv′/Fm′occurred in HNHL plants of C.concinna in comparison with LNHL or HNLL plants.The HNHL plants of C.concinna also had a higher photochemical quantum yield(△F/Fm′) than LNHL or HNLL plants,however no similar responses were found in plants of S.superba and C. hystrix(P<0.05).In the irradiance range of 0―2000μmol photon·m -2·s -1,the fraction of energy consumed by photochemistry(φ PSII )was 18.2%in LNHL plants of S.superba which was higher than that in HNHL plants(P>0.05)and it was significantly higher than in HNLL plants(P<0.05).C.hystrix also had a similar response inφ PSII to nitrogen supply and irradiance.Regardless of species HNLL plants had a significantφ PSII and higher heat dissipation in light,and this effect was more severe in C.concinna than in S.superba or C.hystrix.The results may mean that high-nitrogen importation by nitrogen deposit and low irradiance caused by changing climate or air pollution would more severely restrict photosynthetic processes in the late-successional species C.concinna than in the early-successional species S.superba and intermediate-successional species C.hystrix.The continuous high-nitrogen precipitation in the future and the over cast mist or pollution smoke could induce late-successional species to degrade,however,early-successional species would be more adapted to competition for more resources to keep their dominance in ecosystems.In this sense,the zonal vegetation may accelerate degradation caused by high nitrogen precipitation and low irradiance,while the early-successional and mesophytic vegetations can remain longer.Thus,nitrogen precipitation may play an important role in plant community succession.     

New patterns of the tree beta diversity and its determinants in the largest savanna and wetland biomes of South AmericaOA

Clear and data-driven bioregionalizations can provide a framework to test hypotheses and base biodiversity conservation.Here we used occurrence and abundance data in combination with objective analytical methods to propose two bioregionalization schemes for tree species of the Cerrado and the Pantanal in South America.We also evaluated the contribution of three sets of determinants of the occurrence-and abundance-based subregions.We compiled data on tree species composition from 894local assembl...     

Melatonin: A master regulator of plant development and stress responses

Melatonin is a pleiotropic molecule with multiple functions in plants. Since the discovery of melatonin in plants, numerous studies have provided insight into the biosynthesis, catabolism, and physiological and biochemical functions of this important molecule. Here, we describe the biosynthesis of melatonin from tryptophan, as well as its various degradation pathways in plants. The identification of a putative melatonin receptor in plants has led to the hypothesis that melatonin is a hormone involved in regulating plant growth,aerial organ development, root morphology, and the floral transition. The universal antioxidant activity of melatonin and its role in preserving chlorophyll might explain its anti-senescence capacity in aging leaves. An impressive amount of research has focused on the role of melatonin in modulating postharvest fruit ripening by regulating the expression of ethylene-related genes.Recent evidence also indicated that melatonin functions in the plant's response to biotic stress,cooperating with other phytohormones and wellknown molecules such as reactive oxygen species and nitric oxide. Finally, great progress has been made towards understanding how melatonin alleviates the effects of various abiotic stresses, including salt, drought, extreme temperature, and heavy metal stress. Given its diverse roles, we propose that melatonin is a master regulator in plants.     

Plastid phylogenomics and species discrimination in the "Chinese" clade of Roscoea(Zingiberaceae)OA

Roscoea is an alpine or subalpine genus from the pan-tropical family Zingiberaceae,which consists of two disjunct groups in geography,namely the "Chinese" clade and the "Himalayan" clade.Despite extensive research on the genus,Roscoea species remain poorly defined and relationships between these species are not well resolved.In this study,we used plastid genomes of nine species and one variety to resolve phylogenetic relationships within the "Chinese" clade of Roscoea and as DNA super barcodes f...     

Virus-Induced Gene Silencing in the Culinary Ginger （Zingiber officinale）： An Effective Mechanism for Down-Regulating Gene Expression in Tropical Monocots

Virus-induced gene silencing （VIGS） has been shown to be effective for transient knockdown of gene expression in plants to analyze the effects of specific genes in development and stress-related responses. VlGS is well established for studies of model systems and crops within the Solanaceae, Brassicaceae, Leguminaceae, and Poaceae, but only recently has been applied to plants residing outside these families. Here, we have demonstrated that barley stripe mosaic virus （BSMV） can infect two species within the Zingiberaceae, and that BSMV-VIGS can be applied to specifically down-regulate phytoene desaturase in the culinary ginger Zingiber officinale. These results suggest that extension of BSMV-VlGS to monocots other than cereals has the potential for directed genetic analyses of many important temperate and tropical crop species.     

Duplication and expression analysis of multicopy miRNA gene family members in Arabidopsis and rice

To understand the expansion ofmulticopy microRNA （miRNA） families in plants, we localized the reported miRNA genes from Arabidopsis and rice to their chromosomes, respectively, and observed that 37% of 117 miRNA genes from Arabidopsis and 35% of 173 miRNA genes from rice were segmental duplications in the genome. In order to characterize whether the expression diversification has occurred among plant multicopy miRNA family members, we designed PCR primers targeting 48 predicted miRNA precursors from 10 families in Arabidopsis and rice. Results from RT-PCR data suggest that the transcribed precursors of members within the same miRNA family were present at different expression levels. In addition, although miRl60 and miR162 sequences were conserved in Arabidopsis and rice, we found that the expression patterns of these genes differed between the two species. These data suggested that expression diversification has occurred in multicopy miRNA families, increasing our understanding of the expression regulation of miRNAs in plants.     

Effects of fire disturbance on the soil physical and chemical properties and vegetation of Pinus massoniana forest in south subtropical area

A variety of studies on the impact of fire disturbance on ecosystems has shown that the physical and chemical properties of soil after fire disturbance change notably. Meanwhile, little is known about the effects of different fire intensities on the soil properties and vegetation after fire disturbance, especially in the south subtropical area. In this paper, we analyzed the soil physical and chemical properties, vegetation species and species diversity of fire center, fire edge (which was burned a year ago) and non-burned Pinus massoniana plantation in Gaoyao, Guangdong province, China. The results showed that the soil conductivity, water content, total nitrogen, total potassium, and available potassium content of fire center were significantly higher than those of the non-burned land, and pH was higher than that of fire edge, whereas the available nitrogen, total phosphorus and organic matter content were much lower, which were generally existed in 0–10 cm soil layer and 10–30 cm soil layer. Changes of the soil properties of fire edge were similar with those of fire center, but less significant, and seemed to be more complex. Effects of burning on the vegetation of fire disturbance plots were found to be notable, species number and average height of plants of fire disturbance plots were lower than those of the non-burned plots, a difference of species diversity and uniformity were also shown, and finally, the composition of plant community also changed, e.g., pioneer species such as D. dichotoma, etc., dominated, and drought-resistant plants, heat-resistant plants and positive plants increased after burning.