Characterizing bisexual Artemia populations by isoelectric focusing

Isoelectric focusing (IEF) of protein extracts, -Esterase and Phosphoglucose isomerase, from groups of Artemia adults from different bisexual populations were studied. Both gave clear separation between the Old and New World species. The second was more polymorphic, allowing a discrimination among Mediterranean populations.     

An environmentally determined polymorphism in malate dehydrogenase isozymes ofMyrmica rubra as revealed by isoelectric focusing

Summary A polymorphism in the enzyme malate dehydrogenase in Dorset populations ofMyrmica rubra was detected using isoelectric focusing (IEF). The polymorphism was not detected on native polyacrylamide gels. Two forms, with pI values of 4.9 and 5.7, were resolved.Several lines of evidence show that the polymorphism has an environmental rather than a genetic basis. The cause of the change from one phenotype to the other may be related to a seasonally varying factor. The results indicate that whilst IEF has great potential for revealing isozyme polymorphisms in ants, care should be taken in interpreting results.     

The inhibition of ribulose 1,5-bisphosphate carboxylase oxygenase by several 2-carboxyhexitol 1- and 6-phosphates

The condensation of D-fructose 6-phosphate or 1-phosphate with cyanide has been used to synthesize 2-carboxyhexitol 6-phosphates and 1-phosphates. The products have been characterized in terms of their action on ribulose bisphosphate carboxylase/oxygenase. The reaction of D-fructose 6-phosphate with cyanide is four times as fast (at 22°C) at pH 7.5 than at pH 11.5 and the primary products of condensation are more easily isolated by anion exchange chromatography. Two minor chromatographic peaks (I and II) for diastereomeric 2-carboxyhexitol 6-phosphates are isolated in addition to two major peaks, III and IV, which are lactones. The lactones are those of 2-C-carboxy-D-glucitol 6-phosphate (CG6P) in peak III and 2-C-carboxy-D-mannitol 6-phosphate (CM6P) in peak IV, as established after dephosphorylation by the relative rates of oxidation by periodate and by gas chromatographic retention times of the acetates. Analogous methodology has been used to synthesize the diastereomeric 2-carboxy-hexitol 1-phosphates (CG1P and CM1P) and their lactones from D-fructose 1-phosphate. The four carboxylates inhibit ribulose bisphosphate carboxylase/oxygenase from spinach or Pseudomonas oxalaticus in the following decreasing order of potency: CG6P, CM6P, CG1P, CM1P. The inhibition pattern suggests that the binding of the 5-phosphate moiety of the intermediate in the reaction catalyzed by ribulose bisphosphate carboxylase/oxygenase may be stronger by an order of magnitude than the binding of the 1-phosphate group.     

Investigations on the PGM (phosphoglucomutase) polymorphism by isoelectric focusing inDrosophila melanogaster

Pgm allele frequencies of 383 individuals were determined in a sample ofDrosophila melanogaster from three laboratory Sardinian populations, using the techniques of standard electrophoresis, heat denaturation, and isoelectric focusing. The analysis of the progeny obtained from informative crosses showed that the isoelectric focusing patterns segregate in a Mendelian way. ThePgm ^1.00 andPgm ^0.70 electrophoretic alleles displayed different isoelectric points, whereas thePgm ^1.00,tr andPgm ^1.00,ts isoelectrophoretic alleles could not be differentiated when tested by isoelectric focusing. Moreover, thePgm ^0.70,ts allele was split into two classes, with isoelectric points ofpH 6.4 andpH 6.6.     

Mapping of zein polypeptides after isoelectric focusing on agarose gels

Isoelectric focusing of zein in agarose gels gives sharp separations of at least 25 bands noted among 25 corn-belt inbreds. Six inbreds provided standard bands which were used to construct a pattern map. A method is provided for comparing bands, identified by distance from the cathode, which differ only slightly in position. The 25 inbreds were separated into five groups on the basis of pattern similarity. Some groups contained inbreds derived from widely different sources. Zein isoelectric focusing in agarose should be useful for genotype identification and for determination of varietal purity.     

Changes in ribulosebisphosphate carboxylase/oxygenase and ribulose 5-phosphate kinase abundances and photosynthetic capacity during leaf senescence

The abundances of ribulose-1,5-bisphosphate carboxylate/oxygenase (Rubisco) and ribulose-5-phosphate (Ru5P) kinase in field-grown soybean (Glycine max L. Merr.) leaves were quantified by a Western blot technique and related to changes in chlorophyll and photosynthetic capacity during senescence. Even though the leaf content of Rubisco was approximately 80-fold greater than that of Ru5P kinase, the decline in the levels of these two Calvin cycle enzymes occurred in parallel during the senescence of the leaves. Moreover, the decrease in the content of Rubisco was accompanied by parallel decreases of both the large and small subunits of this enzyme but not by an accumulation of altered large or small subunit isoforms. With increasing senescence, decreases in abundances of Rubisco, Ru5P kinase and chlorophyll were closely correlated with the decline in photosynthetic capacity; thus, the specific photosynthetic capacity when expressed per abundance of any of these parameters was rather constant despite an 8-fold decrease in photosynthetic capacity. These results suggest that during senescence of soybean leaves the chloroplast is subject to autolysis by mechanisms causing an approximately 80-fold greater rate of loss of Rubisco than Ru5P kinase.Jointly supported by the United States Department of Agricultural Research Service and the Kentucky Agricultural Experiment Station, Lexington (paper No. 88 3 286).Mention of a commercial product does not constitute endorsement by the United States Department of Agriculture.     

Organization of repeated sequences in species of the genus Avena

Summary Four repetitive sequences from Avena murphyi have been isolated and their genome organization studied in different species of the genus Avena. A tandem sequence array was found for the Avena species that contain the C genome. Three other dispersed sequences present in the A and C genomes were arranged in a genomespecific manner. The fact that no major differences in the hybridization patterns were found between species with the same basic genome is consistent with the current taxonomy of Avena species.     

Activity expressed from cloned Anacystis nidulans large and small subunit ribulose bisphosphate carboxylase genes

Summary The ribulose bisphosphate carboxylase/oxygenase (EC4.1.1.39) (RubisCO) large and small subunit genes from Anacystis nidulans have been cloned as a single fragment into M 13mp10 and pEMBL8 and expressed in Escherichia coli. From M 13mp10 a low yield of enzyme with high specific activity was obtained. The molecular weight of the active enzyme was 260 000 Da and of the inactive enzyme approximately 730 000 Da. The small and large subunits cloned separately did not express activity. The RubisCO gene cloned into pEMBL8 expressed activity up to 22 times that from the M 13 cloned RubisCO DNA. The RubisCO protein produced by the pEMBL cloned gene had a normal MW (550 000). Immunoprecipitation and polyacrylamide gel electrophoresis showed the presence of both large and small subunits.     

Evolution of fraction 1 protein in the genus Lycopersicon

The large- and small-subunit polypeptide composition of fraction 1 protein contained in seven species of Lycopersicon and Solanum pennellii was determined by electrofocusing. The eight species of protein had large subunits composed of three polypeptides separated by about 0.05 pH unit, but there was no difference in the isoelectric points of the clusters of three polypeptides. By this criterion, no surviving mutations have appeared in the extranuclear DNA coding for the cluster of large-subunit polypeptides during a period of evolution which generated the eight species of plants. The genus Lycopersicon appears to be much younger than its sister genus Nicotiana in the family Solanaceae, where four types of polypeptide clusters have evolved. Three different small-subunit polypeptides whose isoelectric points are coded by nuclear DNA have arisen among the seven Lycopersicon species, and L. hirsutum and S. pennellii have proteins containing single polypeptides and are therefore considered older than L. chilense, L. chimielewskii, and L. parviflorum, whose proteins contain two polypeptides. L. cheesemanii, L. pimpinellifolium, and L. esculentum (and probably L. peruvianum) seem to be the most recently evolved species since their fraction 1 proteins have small subunits composed of three polypeptides.This research was supported by NSF Grant 75-07368 and Contract No. EY-76-S-03-0034, P. A. #8, from the Department of Energy.     

A repeated sequence probe for the C genome in Avena (Oats)

Summary The genus Avena consists of at least 23 species composed of three ploidy levels. Cytogenetic analysis has characterised four distinct karyotypes. These are the A, B, C and D genomes. We have isolated a repeated sequence clone that can be used for the detection of the C genome in Avena by filter hybridization techniques. This clone, termed RS-1, is a genomic DNA clone containing at least one highly repeated sequence that is abundant in Avena species containing the C genome. This sequence or a related sequence is also present, but at much reduced levels, in species that do not contain the C genome. Because of its abundance and the characteristic Southern blot pattern, we have termed this clone a C genome specific clone. We have also done similar analysis of the Avena genus using a rDNA clone from wheat. The results of these experiments demonstrate that clearly definable C genome-specific markers can be identified with both probes. These molecular probes can be useful in studying the genomic relationships of Avena and can provide some clues as to the origin of the cultivated Avena species. These results can, therefore, provide breeders with directions for the efficient transfer of desirable traits of wild Avena species into commencal varieties.     

Purification and properties of ribulose 1,5-bisphosphate carboxylase from sunflower leaves

Extracts from sunflower leaves possess a high ribulose-1,5-bisphosphate (RuBP) carboxylase capacity but this enzyme activity is not stable. A purification procedure, developed with preservation of carboxylase activity by MgSO₄, yielded purified RuBP carboxylase with high specific activity (40 nkat mg^-1 protein). Measurement of kinetic parameters showed high Km values (RuBP, HCO ₃ ^- ) and high Vmax of the reaction catalyzed by this sunflower enzyme; the results are compared with those obtained for soybean carboxylase. Enzyme characteristics are discussed in relation to stabilization and activation procedures and to the high photosynthesis rates of this C₃ species.     

The use of isoelectric focusing to assess percentage hymenopterous parasitism in aphid populations

The primary parasitoid Aphidius uzbekistanicus Luzhetski and its host, the cereal aphid Sitobion avenae (F.) both showed specific bands for the enzyme malate dehydrogenase (MDH), thereby allowing clear detection of parasitism. The specific profiles of MDH activities remained recognizable through all post-embryonal life-stages, but the intensity of staining depended on the instar and morph subjected to analysis. A calibrated equation, representing the relationship between percentage parasitoid-specific MDH activity and percentage parasitism, was elaborated for third instar S. avenae. This equation was, however, not applicable to field-collected material. Reasons for this failure and the possible use of isolectric focusing (IEF) for other parasitoid: host relationships are discussed.

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Zusammenfassung Die herkömmlichen Methoden zur Bestimmung der Parasitierungsrate bei Blattläusen sind zeit- und arbeitsaufwendig, so daß sich meist nur ein geringer Stichprobenumfang bearbeiten läßt. Wir haben daher untersucht, ob die Parasitierung größerer Blattlauskollektive mittels der isoelektrischen Fokussierung (IEF) schnell und verläßlich zu ermitteln ist, wobei wir die Malatdehydrogenase (MDH) als Enzymsystem wählten.Die Modellpopulationen (der Parasitoid Aphidius uzbekistanicus und die Wirtsblattlaus Sitobion avenae) zeigten in allen Stadien und Morphen spezifische Bandenprofile, die ein Erkennen parasitierter Blattläuse eindeutig ermöglichten. Die Intensität der Färbung hing aber von den untersuchten Larvenstadien ab, d.h. ältere, größere Tiere ergaben quantitativ bedeutendere Enzymaktivitäten als jüngere, kleinere.Bei S. avenae wurde dieser Sachverhalt noch von der jeweiligen Morphenzugehörigkeit überlagert: alatiforme Stadien bewirkten stärkere Färbungsintensitäten als apteriforme. Dieses ist wahrscheinlich auf die Anhäufung von MDH-reichen Mitochondrien in der Flugmuskulatur zurückzuführen.Durch eine densitometerische Auswertung war es uns möglich, den relativen Anteil des parasitoidenspezifischen Peaks einer Probe mit dem jeweiligen (bekannten) Parasitierungsgrad in Beziehung zu setzen. Zwischen dem kleinsten und größten Larvenstadium des Parasitoiden ergab sich dabei eine bestimmte Spanne für einen gegebenen Parasitierungsgrad.Mit diesen Werten haben wir eine auf Feldbedingungen ausgerichtete, simulierte Gleichung errechnet, die wir auf Freilandblattläuse mit bekanntem Parasitierungsgrad anwendeten. Um den Einfluß der Stadienzugehörigkeit auszuschalten, wurden nur Blattläuse im dritten Stadium untersucht.Die Verteilung der Larvenstadien der Parasitoiden erwies sich aber als zu heterogen, so daß die errechneten Werte nur in zwei von neun Proben mit den durch Zuchtansätze ermittelten Werten übereinstimmten. In anderen Wirt-Parasitoid-Systemen mit ausgeprägter Stadienspezifität und demzufolge synchroner Entwicklung könnte die IEF aber durchaus von großem Nutzen sein.

     

In vivo photoinactivation of ribulose bisphosphate carboxylase in the gas-vacuolate cyanobacteriumMicrocystis aeruginosa

Irradiation of buoyant, gas-vacuolate cells of the cyanobacteriumMicrocystis aeruginosa by 5·10⁴ Wm^–2 of blue light for 1 h caused a 5% loss of extractable ribulose bisphosphate carboxylase activity compared to dark and red-light controls. Ribulose bisphosphate carboxylase activity was unaffected by blue light in similar experiments conducted with cells containing collapsed gas vacuoles.Abbreviations RuBP Ribulose 1,5-bis-phosphate carboxylase     

Variation in photosynthetic electron transport capacity in vivo and its effects on the light modulation of ribulose bisphosphate carboxylase

Photosynthetic electron transport capacity was varied in vivo in sugar beets using iron deficiency, and its effects on the light modulation of ribulose bisphosphate carboxylase (RuBPCase) studied. Three treatment groups corresponding to decreasing amounts of thylakoids per leaf area were examined: iron sufficient (control), moderately iron-stressed, and severely iron-stressed. Reduction in electron transport capacity in vivo was correlated with a substantial decrease in the level of RuBPCase activation, even at saturating irradiances. These results indicate a direct relationship between RuBPCase activation and photosynthetic electron transport. In addition, our data suggest that the activation of RuBPCase could not solely account for the increases in the photosynthetic rate at high irradiances; RuBPCase reached maximal activation at irradiances well below light saturation for net photosynthesis.Abbreviations Chl chlorophyll - FeCN ferricyanide - FBPase fructose 1,6-bisphosphatase - RuBP ribulose 1,5-bisphosphate - RuBPCase ribulose 1,5-bisphosphate carboxylase - SBPase sedoheptulose 1,7-bisphosphatase     

Nuclear DNA regulates the level of ribulose 1,5-bisphosphate carboxylase oxygenase in Medicago sativa L.

Summary The response to selection for leaf proteins was studied during three selection cycles. Selection for high total nitrogen content showed 75% heritability, and the levels of both ribulose 1,5-bisphosphate carboxylase oxygenase (Rubisco) and cytoplasmic protein were strongly under nuclear DNA control. High and low protein content were correlated with chloroplast area. Although the amounts of nuclear DNA were similar, the ratio of Rubisco/DNA and chlorophyll/DNA changed during the selection process. It can be concluded that the levels of Rubisco achieved in mature plants of M. sativa are under nuclear DNA control. The possible involvement of small subunit (SSU) genes in controlling these levels is discussed.     

Nicotiana chloroplast genome: X. Correlation between the DNA sequences and the isoelectric focusing patterns of the LS of Rubisco

Summary Comparison of the DNA sequences of the rbcL gene from three Nicotiana species reveals a high degree of homology among the 1431 bp in the coding region. Only eight base pair differences are observed between N. otophora and N. tabacum, and between N. otophora and N. acuminata. Four base pair differences are observed between N. acuminata and N. tabacum. Most changes are in the third position of the codon resulting in only two amino acid alterations when N. otophora and N. acuminata are compared with N. tabacum. Evidence is presented demonstrating that the amino acid compositions of the LS derived from the DNA sequence are related to the IEF cluster pattern. A single charged residue is responsible for the difference in cluster pattern.     

Effects of phosphorus nutrition on the response of photosynthesis to CO2 and O2, activation of ribulose bisphosphate carboxylase and amounts of ribulose bisphosphate and 3-phosphoglycerate in spinach leaves

Phosphorus-deficient spinach plants were grown by transferring them to nutrient solutions without PO₄. Photosynthetic rates were measured at a range of intercellular CO₂ partial pressures from 50–500 bar and then the leaves were freeze-clamped in situ to measure ribulose bisphosphate carboxylase (Rubisco) activity and metabolite concentrations. Compared with control leaves, deficient leaves had significantly lower photosynthetic rates, percentage activation of Rubisco, and amounts of ribulose bisphosphate and 3-phosphoglycerate at all CO₂ partial pressures. After feeding 10 mM PO₄ to the petioles of detached deficient leaves, all these measurements increased within 2 hours. At atmospheric CO₂ partial pressure the photosynthetic rate was stimulated in 19 mbar O₂ compared with 200 mbar. At higher CO₂ partial pressures this stimulation was less but the percentage stimulation in deficient leaves was no different from controls in either CO₂ partial pressure. It was concluded that phosphorus deficiency affects both Rubisco activity and the capacity for ribulose bisphosphate regeneration, and possible causes are discussed.Abbreviations A CO₂ assimilation rate - C_i intercellular CO₂ partial pressure - PGA 3-phosphoglycerate - RuP₂ ribulose 1,5-bisphosphate - Rubisco RuP₂ carboxylase/oxygenase     

Evolution of the tetraploidCapsella bursa-pastoris (Brassicaceae): Isoelectric focusing analysis of Rubisco

Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco, EC 4.1.1.39) and its subunits (large subunits = LSU, small subunits = SSU) were isolated from threeCapsella spp. by gel electrophoresis and polypeptide composition was analyzed by isoelectric focusing (IEF) in the presence of 8M urea. The described techniques are recommended for large scale systematic studies. Multiple IEF banding patterns of the SSU are probably the outcome of a heterogenous multigene family. The two diploid speciesC. rubella andC. grandiflora show an identical IEF pattern and could be differentiated from the putative allotetraploidC. bursa-pastoris only by the SSU banding pattern. Uniqueness of some SSU bands in the tetraploid and in the two diploid species, respectively, may indicate an ancient alloploid origin of tetraploidC. bursa-pastoris followed by events leading to divergences in the genomes of the allotetraploid and its presumed diploid progenitors after the hybridization event (SSU gene elimination, acquisition of new SSU genes).     

The sensitivity of isoelectric focusing and electrophoresis in the detection of sequence differences in proteins

Fourteen myoglobins of known sequence were examined by isoelectric focusing with and without urea. The 14 sequences formed six distinct mobility classes on gels without urea and three classes on those with urea. For these proteins, isoelectric focusing provides no advantage over single, nonequilibrium, nondenaturing gels in the total number of distinguishable mobility classes. Only major charge differences, resulting from the changes in the total numbers of acidic and basic amino acids, can be detected on gels with urea, indicating that denaturation by urea alters proteins so that small differences in ionization are eliminated.We thank the Department of Biology, University of Utah, for financial support.