Mycobacterial ecology of the Rio Grande

This is the first study to characterize the environmental conditions which contribute to the presence and proliferation of environmental mycobacteria in a major freshwater river. Over 20 different species of environmental mycobacteria were isolated, including the pathogenic M. avium and M. kansasii. Species of the rapidly growing M. fortuitum complex were the most commonly isolated mycobacteria, and one-third of all isolates were not identified at the species level, even by 16S sequencing. PCR restriction analysis of the hsp65 gene was more accurate and rapid than biochemical tests and as accurate as yet less expensive than 16S sequencing, showing great promise as a new tool for species identification of environmentally isolated mycobacteria. Total environmental mycobacteria counts positively correlated with coliform and Escherichia coli counts and negatively correlated with chemical toxicity and water temperature. Environmental mycobacteria can survive in the alkaline conditions of the river despite previous reports that especially acidic conditions favor their presence. A representative river isolate (M. fortuitum) survived better than E. coli O157:H7 at pHs below 7 and above 8 in nutrient broth. The river strain also retained viability at 8 ppm of free chlorine, while E. coli was eliminated at 2 ppm and above. Thus, in vitro studies support environmental observations that a variety of extreme conditions favor the hardy environmental mycobacteria.     

Mycobacterial Ecology of the Rio Grande

This is the first study to characterize the environmental conditions which contribute to the presence and proliferation of environmental mycobacteria in a major freshwater river. Over 20 different species of environmental mycobacteria were isolated, including the pathogenic M. avium and M. kansasii. Species of the rapidly growing M. fortuitum complex were the most commonly isolated mycobacteria, and one-third of all isolates were not identified at the species level, even by 16S sequencing. PCR restriction analysis of the hsp65 gene was more accurate and rapid than biochemical tests and as accurate as yet less expensive than 16S sequencing, showing great promise as a new tool for species identification of environmentally isolated mycobacteria. Total environmental mycobacteria counts positively correlated with coliform and Escherichia coli counts and negatively correlated with chemical toxicity and water temperature. Environmental mycobacteria can survive in the alkaline conditions of the river despite previous reports that especially acidic conditions favor their presence. A representative river isolate (M. fortuitum) survived better than E. coli O157:H7 at pHs below 7 and above 8 in nutrient broth. The river strain also retained viability at 8 ppm of free chlorine, while E. coli was eliminated at 2 ppm and above. Thus, in vitro studies support environmental observations that a variety of extreme conditions favor the hardy environmental mycobacteria.     

The Rio Grande Complex and the Northern Plains

Abstract

The earliest component at the La Bolsa site in the Galisteo Basin of north-central New Mexico is an early manifestation of what is defined in this paper as the Quemado Phase of the proposed Rio Grande Complex. Relatively dated to about 7000 to 6000 years ago, this Proto-Archaic Phase is postulated to be ultimately rooted in the Agate Basin Complex of the northern Plains.     

The occurrence, distribution and toxicity of cyanobacteria in the estuary of Lagoa dos Patos, Rio Grande do Sul

Several blooms of Microcystis aeruginosa have been observed in the Patos Lagoon estuary during the last fifteen years without a proper investigation of their ecological importance or possible toxicity. The present study has identified and quantified the presence of cyanobacteria in the Patos Lagoon estuary, particularly of M. aeruginosa. During this survey, identification and quantification of the main phytoplankton groups were done in relation to geographical distribution in the estuary. The presence of M. aeruginosa colonies in the estuarine region confirmed their superficial distribution throughout the estuarine waters during twelve months with a maximum of 1, 3.10(6) cells. L-1 in December, 1994 and a minimum of 1, 5.10(5) cells. L-1 in August, 1995 and also confirmed that M. aeruginosa originated from waters in the north of the estuary. The period of the highest cell and colonies densities was coincident with high chlorophyll-a levels in surface waters. Toxicity of M. aeruginosa bloom material was determined by bioassay and concentrations of hepatotoxins microcystins were identified by HPLC-DAD. M. aeruginosa blooms were considered highly toxic, presenting a 24 h-LD50 lower than 100 mg.Kg-1 b.w. and a toxin content higher than 1 microgram.mg-1 d.w. Several microcystin variants were found in the extracts with microcystin-LR predominating.     

No Genetic Evidence for Hybridization Between Rio Grande Sucker, Catostomus Plebeius, and the Introduced White Sucker, Catostomus Commersoni, in the Rio Grande

Hybridization with the introduced white sucker, Catostomus commerson, has been blamed in part for the decline of the Rio Grande sucker, C. plebeius, in the upper Rio Grande basin of Colorado and New Mexico but without convincing evidence. Here we report results from a genetic study of hybridization between the two species across their sympatric range in New Mexico. We used two nuclear microsatellite markers and one mitochondrial DNA marker to identify hybrids. These genetic methods detected no F1 or backcross hybrids in larvae, young-of-the-year or adults from the upper Rio Grande basin. This indicates that hybridization between the two species occurs rarely, if ever.     

Habitat use of the Rio Grande silvery minnow (Hybognathus amarus) during a long-term flood pulse in the Middle Rio Grande, New Mexico

The Middle Rio Grande (MRG) of New Mexico has been influenced by man for over 500?years. Native Americans began diverting water to irrigate agricultural crops in the floodplain in the 14th century. The Spanish followed and increased agricultural irrigation to over 125 000 acres. Frequent flooding of the MRG valley in the 19th century led to many engineering projects in the early 20th century to control flooding. A series of impoundment dams, diversion dams, and levees were constructed. The loss of floodplain habitats throughout the MRG Valley has altered the riparian community and caused the demise of many fish species. A controlled flood pulse from Cochiti Reservoir, New Mexico was initiated in April 2005 to support the recovery of the endangered Rio Grande silvery minnow, Hybognathus amarus. This study documents habitat selection by larval fishes in a restored floodplain in the Rio Grande, NM. Larval fish light traps captured 394 larvae representing four cyprinid species (Pimephales promelas, H. amarus, Cyprinella lutrensis and Cyprinus carpio). Results for CCA indicate that Hybognathus amarus prefer shallow, low velocity habitats. Results from Chao-Jaccard similarity index indicated that relative contribution was highest in P. promelas at 64% followed by H. amarus 33%. Results from (dis)similarity analysis reveal that species composition between habitat orientation and date was highest in H. amarus at 42% followed by P. promelas 40%. Cyprinella lutrensis and C. carpio represented 9.5 and 8.5%, respectively. A general linear model indicated that only depth and velocity were significantly different (p?=?0.02 and p?=?0.03 respectively).     

A Survey Of Paleo-Indian Sites Along the Middle Rio Grande Drainage

Abstract

Sandia Cave is so important to the Paleo-Indian picture that it dominates the “classic” hunting site complex in the middle Rio Grande. As a result there is a tendency to minimize the considerable variety of other “classic” hunting points that have been found in the region, expecially in the Estancia Valley where such pluvial lakes as Lake Estancia and the Galisteo Basin once existed.

In addition 3 sites in the Rio Grande valley exhibit a different cultural horizon associated with the period of extinct fauna. This complex is characterized by lack of projectile points, a dearth of milling stones, and the dominance of crude scrapers, and choppers.     

Hematozoan parasites of Rio Grande wild turkeys from southern Texas

One hundred twenty-three of 300 blood samples (41%) taken from Rio Grande wild turkeys (Meleagris gallopavo intermedia) from three locations in southern Texas (Welder Wildlife Refuge, Chaparrosa Ranch, and Campo Alegre Ranch) and subinoculated into domestic broad-breasted white turkey poults were positive for a Plasmodium (Novyella) sp. Analysis of blood films from 350 turkeys revealed Haemoproteus meleagridis in 76% of the birds. A significantly greater mean parasite intensity was observed in birds from Welder Wildlife Refuge. Birds from the Campo Alegre Ranch exhibited a significantly higher prevalence of H. meleagridis than birds from Chaparrosa. The Plasmodium sp. was infective for canaries (Serinus canaria), bobwhites (Colinus virginianus), and ring-necked pheasants (Phasianus colchicus), but would not produce infection in white leghorn chickens (Gallus gallus) or Coturnix quail (Coturnix coturnix). Attempts to infect Culex tarsalis and C. pipiens were unsuccessful. Asexual erythrocytic synchrony was not observed when blood-induced infections were monitored in two domestic turkey poults every 4 hr for 72 hr. Exoerythrocytic stages were not found upon examination of impression smears and tissue samples taken from brain, liver, spleen, kidney, lung, and bone marrow. The Plasmodium sp. is most similar morphologically to three species in the subgenus Novyella, P. hexamerium, P. vaughani, and P. kempi. The most striking similarities are to P. hexamerium, and involve mean merozoite number, erythrocytic schizont location, and vertebrate host susceptibility. It differs from P. vaughani in being able to infect turkeys and in type of parasitized erythrocytes. Differences to P. kempi include mean merozoite number, and ability to infect pheasants, and its inability to develop in C. pipiens and C. tarsalis.     

Behaviour of the Common Moorhen in Rio Grande do Sul, Brazil

This study presents data on behavioural acts performed by the Common Moorhen Gallinula chloropus in southern Brazil, and compares these with the behaviours previously reported for other populations. Focal observations of individuals were conducted in the municipality of Santa Maria, in the central region of the state of Rio Grande do Sul, Brazil. The sampling was done in 2-hour sessions, between January and March of 2007. A total of 20 behavioural acts, grouped in seven categories, were identified and described: locomotion (N = 5 acts), grooming (N = 4), intra-specific behaviour (N = 2), inter-specific behaviour (N = 3), foraging (N = 2), reproduction (N = 2) and rest (N = 2). Among the observed behaviours were acts that are not described in the literature such as greeting of offspring and some feeding acts. Regarding the use of habitat, we observed that this species has a preference for water or aquatic macrophytes, which is contrary to other reports. In the analysis of behavioural daily variation, overall behavioural categories did not vary significantly throughout the day, whereas we observed a significant difference in the use of categories during the periods 11:00 am–1:00 pm, 1:00–3:00 pm and 5:00–7:00 pm. The contrasting data between studies indicate that the variation between habitats and ecological interactions may generate different selective pressures on the behaviour of G. chloropus.     

Chronic pulmonary paracoccidioidomycosis in the state of Rio Grande do Sul,Brazil

Since 1942, when paracoccidioidomycosis was first identified in the state of Rio Grande do Sul, paracoccidioidal pulmonary lesions became a great concern to physicians. The present study focuses on 53 patients diagnosed over a seven-year period who presented paracoccidioidal lesions circumscribed to the lungs. These patients presented clinical and radiological features that simulated several pulmonary infectious and non-infectious conditions. Four unusual cases are briefly discussed. A sequence of laboratorial tests should be established for the diagnosis of pulmonary paracoccidioidomycosis. This revised version was published online in June 2006 with corrections to the Cover Date.     

Heavy Metal Distribution in Open Canals and Drains in the Upper Rio Grande Basin

The inclusion of reclaimed effluents for irrigated agriculture may allow communities along the U.S.-Mexico border to use water resources more efficiently and reduce urban costs of wastewater treatment. However, metal inflow from industry and urbanization may threaten food safety. This study examines metal concentrations in sediments from open canal systems charged with flow from the Rio Grande and from effluents discharged from border communities. At the surface of canal beds, sediments were collected from six canal segments that began at the fringe of the El Paso/Juarez metroplex to rural areas downstream, and ranged from 9 to 24?km in length. Sediments were analyzed for Cd, Co, Cr, Cu, Ni, Pb, and Zn. These metals rarely exceeded 20?mg kg^?1. Drainage and effluent conveyance increased the variability of metal concentrations in sediments. Geostatistical models did not significantly account for spatial variability of metals, except in Mexico. This may implicate multiple rather than single inflow sources of metals. Peaks in metal concentrations often coincided with growing rural communities. However, most metal concentrations were within conventional global ranges and were not at levels high enough to threaten food safety. Future sampling strategies will require reduced sampling intervals from 1 to <0.13?km.     

Modeling Agricultural Production Strategies in the Northern Rio Grande Valley, New Mexico

Diversification in agricultural techniques is a common strategy of risk minimization in nonindustrial societies. However, attribution of suboptimal behavior to risk minimization without consideration of the structure of risk and its environmental context obscures the complexity of agricultural decision-making. The productive potential of a prehistoric agricultural system that includes floodwater and dry farming and stream irrigation is modeled using Geographic Information System (GIS) analysis to evaluate whether diversification occurred as a response to population pressure or as a risk buffering strategy. The estimated productive potential of floodwater and irrigation farming is sufficient to have supported the estimated local population, suggesting that risk buffering is a more likely explanation. Floodwater farming and stream irrigation form a dual strategy that is effective at reducing risk. However, the potential of dry farming for subsistence production is insufficient for buffering more than a 2% productive shortfall. We propose that, within this generally risk-averse economy, dry farming was oriented toward the production of nonsubsistence crops such as cotton.     

An improved protocol for the regeneration and transformation of tomato (cv Rio Grande)

An improved protocol for Agrobacterium tumefaciens-mediated transformation and regeneration of the tomato cultivar Rio Grande with Arabidopsis thaliana early flowering genes AP1 and LFY has been developed. The effect of different factors on the efficiency of regeneration as well as transformation has been studied. A. tumefaciens strain EHA 105 harboring either of the binary vectors pROKIIAP1GUSint or pROKIILFYGUSint, containing APETALA 1, LEAFY (LFY), β-glucuronidase (GUS), and neomycin phosphotransferase II (NPTII) was used for transformation. The effect of different regeneration media was studied and Murashige and Skoog (MS) medium containing Zeatin 1 mg/l and IAA 0.5 mg/l was found best, producing the highest percentage of regeneration, i.e., 30.4% and transformation, i.e., 84% (P < 0.05). The age of explants was studied and 1-week-old explants were found best producing highest regeneration (29.5%) and transformation (87.5%) values (P < 0.05). Three different types of explants were compared and best results were obtained from apical meristem explants (60.5% regeneration and 85% transformation) (P < 0.05). Transient and stable GUS expression was observed in the transgenic plants.     

Infectious disease survey of Rio Grande wild turkeys in the Edwards Plateau of Texas

State wildlife agencies have translocated thousands of wild turkeys (Meleagris gallopavo) since the 1930s to reestablish this species. Because of threats to the domestic poultry industry and wild birds, screening for selected infectious agents has become routine since the early 1980s. One of the principal sources for Rio Grande wild turkeys (M. gallopavo intermedia) for translocation purposes was the Edwards Plateau of Texas (USA). Unfortunately, turkey abundance has declined in the southern Edwards Plateau since the late 1970s. Surprisingly few studies have addressed wild turkeys in this region, perhaps reflecting its status as the heart of Rio Grande turkey range. We surveyed 70 free-living Rio Grande wild turkeys from Bandera and Kerr counties, Texas, for evidence of exposure to Salmonella typhimurium, S. pullorum, Mycoplasma gallisepticum, M. meleagridis, M. synoviae, Chlamydophila psittaci, and the avian influenza, Newcastle disease, turkey corona, and reticuloendotheliosis viruses. Of these, 80% (56) were seropositive for both M. gallisepticum and M. synoviae on the serum plate antigen test. Ten of these individuals (14% of total) were positive for M. synoviae by hemagglutination inhibition testing. All other serologic tests were negative. Two adult females sampled in Kerr County, whose body mass was significantly less than that of other adult females trapped in the area, tested positive for reticuloendotheliosis virus (REV) proviral DNA on polymerase chain reaction. Reticuloendotheliosis virus was isolated from one of these individuals. The pathogenesis, transmission, and/or population-level influences of M. gallisepticum, M. synoviae, and REV in Rio Grande wild turkeys deserves further study.