Polymorphic microsatellite DNA markers in the mudflat topshell Diloma subrostrata (Gastropoda,Trochidae)

Very little information is available on the intraspecific genetic structure of topshell populations. Here, we report the characterization of five polymorphic microsatellite loci in the New Zealand mudflat topshell, Diloma subrostrata. The number of alleles per locus ranged from two to 23, observed and expected heterozygosities did not deviate from Hardy–Weinberg equilibrium (P < 0.05) and no linkage disequilibrium was detected between locus pairs (P < 0.05). We are currently using these markers to investigate genetic population structure of D. subrostrata in New Zealand.     

Characterization of 15 polymorphic microsatellite markers in the freshwater snail Aplexa marmorata (Mollusca, Gastropoda)

We describe 15 new variable microsatellites in the freshwater snail Aplexa (Physa) marmorata, as well as conditions for multiplexing and simultaneous genotyping sets of loci. Two to 11 alleles were detected per locus over the five populations studied, and up to eight alleles per locus and population. The observed heterozygosity was extremely low, most probably as the consequence of high selfing rates. The genetic differentiation among populations was large. These markers will constitute efficient tools for investigating the population structure in fragmented habitats. Cross-species amplification in three Physa species (P. acuta, P. fontinalis and P. gyrina) was rather unsuccessful.     

Polymorphic microsatellite DNA markers in the ant Formica exsecta

Highly polymorphic genetic markers provide a useful tool for estimating important genetic parameters in studies of the evolution of sociality in insects. Here we report 14 polymorphic microsatellite markers developed in the ant Formica exsecta. The number of alleles found ranged between 3 and 18 per locus. These markers were developed for studying genetic population structure and mating structure in F. exsecta populations with varying social organizations (monogyne and polygyne types of societies). Cross‐species amplification indicated that some of the markers might be usable even in species belonging to different subfamilies.     

Polymorphic microsatellite DNA markers for the Florida manatee (Trichechus manatus latirostris)

Florida manatees (Trichechus manatus latirostris) are marine mammals that inhabit the coastal waters and rivers of the southeastern USA, primarily Florida. Previous studies have shown that Florida manatees have low mitochondrial DNA variability, suggesting that nuclear DNA loci are necessary for discriminatory analyses. Here we report 10 polymorphic microsatellite loci with an average of 4.2 alleles per locus, and average heterozygosity of 50.1%. These loci have been developed for use in population studies, parentage assignment, and individual identification.     

Polymorphic microsatellite DNA markers in the mangrove tree Avicennia alba

Like most species of mangrove trees of the genus Avicennia, A. alba is widely distributed among tropical and subtropical coasts around the world. Mangroves play an essential role in ecosystem dynamics but are reported to be regressing as human pressure increases on coastal zones. Hypervariable genetic markers are useful for population genetics studies, to estimate the level of impact and the populations potential for recovery. Microsatellite markers for A. alba were obtained by screening a partial genomic library enriched for microsatellite dinucleotide repeats. Among 20 primer pairs defined, six amplified polymorphic microsatellites with a satisfying level of variability.     

Polymorphic microsatellite DNA markers for the rhinoceros auklet (Cerorhinca monocerata)

Eight polymorphic microsatellite loci were isolated from the partial genomic library of the rhinoceros auklet Cerorhinca monocerata. The heterozygosities observed at the isolated loci using eight primer sets in 46 nestlings from one breeding colony in Japan ranged from 0.311 to 0.773, and all but one locus did not deviate from the Hardy–Weinberg expectations. Cross‐species amplification in the tufted puffin Fratercula cirrhata was successfully performed using six of the eight primer sets, indicating their applicability to this species.     

Characterization of 17 microsatellite loci in the Japanese land snail genera Mandarina,Ainohelix, and Euhadra (Mollusca,Gastropoda, Pulmonata)

Land snails of the genera Mandarina, Euhadra and Ainohelix are useful for understanding the ecology and evolution of speciation and adaptation, so we have developed 17 microsatellite loci for these species. As in other land snails, most of the loci are highly polymorphic compound repeats, with a great size range between alleles. The loci should be useful in understanding gene‐flow, genetic structure and speciation in these species.     

Development of 10 microsatellite loci in the pulmonate snail Biomphalaria kuhniana (Mollusca, Gastropoda)

We characterized 10 variable microsatellite loci in the freshwater snail Biomphalaria kuhniana, as well as conditions for multiplexing and co-loading sets of loci. Two to five alleles were detected per locus over the two studied populations in Venezuela. High inbreeding coefficients suggest high selfing rates. Cross-species amplification provided some variability at eight and three loci in the other species belonging to the Biomphalaria straminea complex (B. straminea and B. intermedia), but was unsuccessful in more divergent species.     

Characterization of 15 microsatellite loci in the pulmonate snail Pseudosuccinea columella (Mollusca, Gastropoda)

We characterized 15 new variable microsatellites in the freshwater snail Pseudosuccinea (Lymnaea) columella, as well as conditions for multiplexing and simultaneously genotyping sets of loci. Two to six alleles were detected per locus over the six populations studied. Gene diversity ranged from 0.000 to 0.498, but essentially no heterozygous individuals were observed. This resulted in extremely high F(IS) estimates, and therefore high selfing rates. The F(ST) estimates ranged from 0.18 to 1 among populations, but was generally high. These markers will constitute efficient tools for investigating the population structure of this invasive species. Cross-species amplification was on the whole unsuccessful.     

Novel microsatellite markers for an endangered freshwater snail,Heleobia atacamensis (Caenogastropoda: Cochliopidae), from the Atacama Saltpan

ABSTRACT

The minute freshwater gastropod Heleobia atacamensis is only known from its type locality Tilopozo, located at the southern end of the Atacama Saltpan, Antofagasta Region, Chile. It is classified as Critically Endangered by the national agency, Ministerio del Medio Ambiente de Chile, due to its restricted distribution. For the first time, we have isolated and evaluated 65 microsatellite markers in 42 specimens of H. atacamensis, successfully characterising 11 as polymorphic. Cross-amplification testing was successful in three other species of the genus. As a result, the development and characterisation of these markers could be useful in future genetic studies of H. atacamensis and its congeners, regarding population structuring, dispersal patterns and recent demographic history. Furthermore, this information will also be significant to undertake conservation efforts in this endangered species, since its environment is highly threatened by lithium mining activities and a global water crisis.     

Parasitic mites influence fitness components of their host, the land snail Arianta arbustorum

Abstract. Parasites can influence the population dynamics of their hosts by affecting life-history strategies and behavior. The hematophageous mite Riccardoella limacum lives in the lung cavity of terrestrial gastropods. We used correlational and experimental approaches to investigate the influence of parasite infection on the behavior and life-history traits of the simultaneously hermaphroditic land snail Arianta arbustorum , a common host of R. limacum. Naturally infected individuals of A. arbustorum , collected in the wild, showed a decreased activity compared with uninfected snails. The reproductive output, expressed as the number of eggs deposited in a reproductive season, was reduced in mite-infected hosts. However, the hatching success of the eggs laid by parasitized snails was slightly higher than that of uninfected individuals. We also examined winter survival in 361 adults of A. arbustorum collected from four natural populations. The prevalence of mite infection ranged from 44.8% to 70.1% in three populations (snails in the fourth population were not infected). Winter survival was reduced in infected snails in two out of three populations. Furthermore, experimentally infected snails from an uninfected population showed a reduced winter survival compared with control snails. Our results indicate that parasite pressure imposed by members of R. limacum may influence life history in A. arbustorum.     

A mitochondrial phylogeny uncovers taxonomic ambiguity and complex phylogeographic patterns in the eastern Australian land snail Austrochloritis (Stylommatophora,Camaenidae)

We analyzed the mitochondrial differentiation of the southeast Australian land snail genus Austrochloritis Pilsbry, 1890, family Camaenidae, which encompasses 34 currently accepted species. These species were exclusively described and delimited based on comparative shell morphology, while their reproductive anatomy has remained undocumented. Phylogenetic analyses of partial fragments of the cytochrome c oxidase subunit 1 gene (COI) and 16S rRNA (16S) genes revealed widespread incongruence between the shell-based species taxonomy and the branching patterns of phylogenetic trees indicating the urgent need of more comprehensive systematic review. The phylogeographic patterns in Austrochloritis are consistent with well-documented biogeographic barriers in southeastern Australia, namely the Hunter River Valley and the McPherson Range, which demarcate concomitant biogeographic breaks in the biota of the region. These breaks are thought to result from past expansions and contractions of mesic forests caused by the climatic oscillations during the mid to late Neogene. Our study also provides evidence for potentially widespread sympatry of Austrochloritis species in the northern part of their distribution, which is in conflict with contemporary paradigms that presume predominantly allopatric distributions in congeneric land snails in eastern Australia.     

Polymorphic microsatellite loci in peafowl (Pavo cristatus)

Understanding how the genetic characteristics of parents influence reproductive output is central to predicting the dynamics of small, endangered populations. We conducted a breeding experiment to look at the paternal genetic effects on offspring sex, fertility and growth in the peafowl (Pavo cristatus). Microsatellite loci were developed to allow maternity assignment and thus to allow us to separate maternal from paternal effects. We found 19 polymorphic loci in our inbred, captive population, six of which were only slightly polymorphic (H_E range: 0.04–0.70). The remaining 13 loci were polymorphic enough to determine maternity by exclusion in approximately 85% of offspring.     

Polymorphic microsatellite markers for the Socotran endemic herb Begonia socotrana

Six polymorphic microsatellite markers have been developed to examine population structure and outcrossing rates in the narrow‐range endemic Begonia socotrana. Only two of the markers amplify products in its recently discovered sister species B. samhaensis. All of the loci amplify in winter‐flowering Begonia hybrids derived from B. socotrana, revealing little polymorphism and demonstrating the narrow genetic base of the material used in their production.