Heterologous expression of furostanol glycoside 26-O-β-glucosidase of Costus speciosus in Nicotiana tabacum

Furostanol glycoside 26-O-β-glucosidase (F26G) is a specific β-glucosidase converting a furostanol glycoside (FG) to its corresponding spirostanol glycoside (SG). A cDNA encoding F26G from Costus speciosus was introduced into a heterologous plant, Nicotiana tabacum via Agrobacterium tumefaciens using a binary vector method. Successful integration of the cDNA into tobacco chromosomal DNA was confirmed by PCR analysis. F26G activity was also detected in cell-free extracts of the transgenic plantlets.     

Apoplastic and cytosolic expression of full‐size antibodies and antibody fragments in Nicotiana tabacum

We compared the expression of a functional recombinant TMVspecific fullsize antibody (rAb29) in both the apoplast and cytosol of tobacco plants and a single chain antibody fragment (scFv29), derived from rAb29, was expressed in the cytosol. Cloned heavy and light chain cDNAs of fullsize rAb29, which binds to TMV coat protein monomers, were integrated into the plant expression vector pSS. The fullsize rAb29 was expressed in the cytosol and targeted to the apoplast by including the original murine antibody leader sequences. Levels of functional fullsize rAb29 expression were high in the apoplast (up to 8.5g per gram leaf tissue), whereas cytosolic expression was low or at the ELISA detection limit. Sequences of the variable domains of rAb29 light and heavy chain were used to generate the single chain antibody scFv29, which was expressed in the periplasmic space of E.coli and showed the same binding specificity as fullsize rAb29. In addition, scFv29 was functionally expressed in the cytosol of tobacco plants and plant derived scFv29 maintained same binding specificity to TMVcoat protein monomers as rAb29.     

Nucleotide sequence of the phosphinothricin N-acetyltransferase gene from Streptomyces viridochromogenes Tü494 and its expression in Nicotiana tabacum

The phosphinothricin (Pt) N-acetyltransferase gene (pat) of Streptomyces viridochromogenes Tü494 is located on a 0.8-kb BglII fragment [Strauch et al., Gene 63 (1988) 65-74]. By sequencing a 1.3-kb BglII-SstII fragment, an open reading frame representing the pat gene was found. It encodes a polypeptide of 183 amino acids with an Mr of 20,621. The base composition of the pat gene is typical for Streptomyces [70.1 mol% (G + C) in total and 93.5 mol% (G + C) in the third position]. Translation of pat is initiated by a GTG codon which was identified by frameshift mutations in Escherichia coli as well as in Streptomyces lividans. Significant homology of the pat gene was found to the bialaphos-resistance gene (bar) of Streptomyces hygroscopicus [Thompson et al., EMBO J. 9 (1987) 2519-2523]. However, variations were detected in the 5'-noncoding region of the two resistance genes which may reflect differences in regulation. Since Pt is a potent herbicide, the pat gene was modified and introduced into Nicotiana tabacum by Agrobacterium-mediated leaf-disc transformation. The GTG start codon of pat was replaced by ATG. Subsequently the modified pat-coding region was fused to the 35S promoter of the cauliflower mosaic virus. Transgenic plants could directly be selected on Pt-containing medium.     

Characterization of a barley gene coding for an α-amylase inhibitor subunit (CMd protein) and analysis of its promoter in transgenic tobacco plants and in maize kernels by microprojectile bombardment

A gene coding for a barley CMd protein was isolated from a genomic library using a cDNA probe encoding the wheat CM3 protein. Promoter sequence analysis reveals motifs found in genes specifically expressed in endosperm and aleurone cells, as well as TATA and other putative functional boxes. 720 bp of the Hv85.1 CMd protein gene promoter, when fused to a gus coding region, were unable to direct GUS activity in the seeds of transgenic tobacco plants. In contrast, the same construction delivered into immature maize kernels by microprojectile bombardment was able to direct expression of GUS in the outermost cell layers of maize endosperm in both a tissue-specific and a developmentally determined manner.     

181 Integrative analysis of gene expression and protein–protein interaction networks in Glioblastoma

Glioblastoma multiforme (GBM) is the most malignant of all the brain tumors with very low median survival time of one year, as per Central Brain Tumor Registry of the USA, 2001. Efforts are ongoing to understand this disease pathogenesis in complete details. Global gene expression changes in GBM pathogenesis have been studied by several groups using microarray technology (e.g. Carro et al., 2010). One of the many approaches to ‘understand the control mechanisms underlying the observed changes in the activity of a biological process’ (Cline et al., 2007) is integration of gene expression and protein–protein interactions (PPI) datasets. Among several examples, aberrant activation of Wnt/β-catenin signaling pathway as well as sonic hedgehog (SHH) signaling pathway is reported in GBMs (Klaus & Birchmeier, 2008). Further, these two pathways are also involved in proliferation and clonogenicity of glioma cancer stem cells (Li et al., 2009), which are thought to play a role in glioma initiation, proliferation, and invasion, and are one of the important points of intervention. Hedgehog–Gli1 signaling is also found to regulate the expression of stemness genes. In this paper, analyses of the relationship between the significant differential expression of these and other genes and the connectivity as well as topological features of a PPI network would be discussed. This way, genes potentially overlooked when relying solely on expression profiles may be identified which can be biologically relevant as possible drug target/s or disease biomarker/s.     

The promoter of aBrassica napus polygalacturonase gene directs pollen expression ofβ-glucuronidase in transgenicBrassica plants

A 647-bp 5-flanking fragment obtained from genomic clone Sta 44G(2) belonging to a family of polygalacturonase genes expressed inBrassica napus pollen was fused to the-glucuronidase (GUS) marker gene. This fusion construct was introduced intoB. napus plants viaAgrobacterium tumefaciens transformation. Analysis of the transgenicB. napus plants revealed that this promoter fragment is sufficient to direct GUS expression specifically in the anther and that GUS activity increases in pollen during maturation.Abbreviation GUS -Glucuronidase     

Cell frequencies of green somatic-variations in the tl chlorophyll mutant of Nicotiana tabacum var ‘Samsun’

Summary The chlorophyll deficient tl mutant of Nicotiana tabacum var Samsun expresses green, clear and twin, green and clear somatic variations spontaneously on leaves at a low frequency. This character is maintained after both vegetative multiplication and sexual reproduction. However a very important phenotypic variability in the capacity for somatic variation appears in in vitro bud neoformations from leaf fragments of tl/tl homozygous plants. This variability is observed in the type of variations and the variation pattern, defined as the frequency and size of the variant areas.The present work was aimed at determining both the cell frequencies of the events which lead to the somatic variation and the preferential sequence of leaf initial development during which these frequencies are at a maximum. It was limited to plant populations with very different patterns for green variations, some having a high frequency of large variation, others having a high frequency of small variations. They were compared with a population of control plants having a low frequency.In the case of plants having a high frequency of large green variations, the events leading to somatic variation occurred between the twenty-first and the twelfth cell cycles preceding the end of the initial division phase, the maximum cell frequencies being in the seventeenth and sixteenth cycles. The maximum frequencies appeared extremely high, being on average about 10^–2. In plants with a high frequency of small green variations the event occurred between cell cycles nine and one, with mean frequencies of 10^–3 but without any clearly marked maximum. In the low frequency control plants the event also took place during the last ten cell cycles but with decreasing frequencies from 10^–4 to 10^–7.The frequency and the starting period of the cell events leading to somatic variation are closely dependent on the state of the cell. This is, on the one hand, strictly linked to the physiology of the plant and, on the other, closely correlated with the stage of differentiation, which may vary according to the genetic back ground of the leaf initial cells.The results are discussed in relation to comparable observations and the relevant interpretations made on other instability mutants.     

Biotransformation of testosterone and other androgens by suspension cultures of Nicotiana tabacum “Bright yellow”

It has been shown that the cultured cells of Nicotiana tabacum “Bright Yellow” are capable of transforming testosterone to Δ⁴-androstene-3, 17-dione, 5α-androstan-17β-ol-3-one, 5α-androstane-3β, 17β-diol, its dipalmitate and 3- and 17-monoglucosides, epiandrosterone, its palmitate and glucoside, testosterone glucoside. 5α-Androstane-3β, 17β-diol dipalmitate and 3- and 17-monoglucosides, epiandrosterone palmitate and glucoside, and testosterone glucoside have been found for the first time as metabolites of testosterone in plant systems. Δ⁴-Androstene-3,17-dione was converted to testosterone. 5α-Androstan-17β-ol-3-one, which has been recognized as an active form of testosterone in mammals, was also detected. It has also been demonstrated that [4-¹⁴C]testosterone is actively incorporated in these transformations.     

Fusions between green fluorescent protein and β-glucuronidase as sensitive and vital bifunctional reporters in plants

By fusing the genes encoding green fluorescent protein (GFP) and -glucuronidase (GUS) we have created a set of bifunctional reporter constructs which are optimized for use in transient and stable expression studies in plants. This approach makes it possible to combine the advantage of GUS, its high sensitivity in histochemical staining, with the advantages of GFP as a vital marker. The fusion proteins were functional in transient expression studies in tobacco using either DNA bombardment or potato virus X as a vector, and in stably transformed Arabidopsis thaliana and Lotus japonicus plants. The results show that high level of expression does not interfere with efficient stable transformation in A. thaliana and L. japonicus. Using confocal laser scanning microscopy we show that the fusion constructs are very suitable for promoter expression studies in all organs of living plants, including root nodules. The use of these reporter constructs in the model legume L. japonicus offers exciting new possibilities for the study of the root nodulation process.     

Fusions between green fluorescent protein and β-glucuronidase as sensitive and vital bifunctional reporters in plants

By fusing the genes encoding green fluorescent protein (GFP) and -glucuronidase (GUS) we have created a set of bifunctional reporter constructs which are optimized for use in transient and stable expression studies in plants. This approach makes it possible to combine the advantage of GUS, its high sensitivity in histochemical staining, with the advantages of GFP as a vital marker. The fusion proteins were functional in transient expression studies in tobacco using either DNA bombardment or potato virus X as a vector, and in stably transformed Arabidopsis thaliana and Lotus japonicus plants. The results show that high level of expression does not interfere with efficient stable transformation in A. thaliana and L. japonicus. Using confocal laser scanning microscopy we show that the fusion constructs are very suitable for promoter expression studies in all organs of living plants, including root nodules. The use of these reporter constructs in the model legume L. japonicus offers exciting new possibilities for the study of the root nodulation process.     

Immuno-localization of Calmodulin in Unfertilized and Fertilized Embryo Sacs in Nicotiana tabacum var.macrophylla

Light microscopic immunohistochemical techniques with horse radish peroxidase(HRP)-conjugated second antibody and protein A-gold immunoelectron microscopic techniques were used to study the distribution of calmodulin (CaM) in unfertilized and fertilized embryo sacs in Nicotiana tabacum var. mocrophylla. Before fertilization, CaM was richer in the egg apparatus cells and antipodal cells than in the central cell. During the course from pollination to fertilization, the persistent synergid contained more CaM than the degenerated synergid. Meanwhile, two distinct bands rich in CaM were observed between the egg apparatus and the central cell, and gradually fused with each other appearing arc shape. When the two polar nuclei had fused, this CaM-rich band began to disappear. After fertilization, CaM level was still high in the zygote and the persistent synergid but low in the endosperm cells. Although there was no evidence about the polar distribution of CaM in the zygote, distinguishable difference, however, existed between the apical cell and the basal cell of a proembryo, being higher in the former than in the latter. The function of CaM during double fertilization and early embryogenesis as well as the temopral relationship between the CaM-rich band and the actin corona reported by other investigators are discussed.     

Expression of maize γ-zein and β-zein genes in transgenic Nicotiana tabacum and Lotus corniculatus

Accumulation of zeins, the endosperm storage proteins of maize, in a heterologous plant expression system was attempted. Plants of Nicotiana tabacum and Lotus corniculatus were transformed by Agrobacterium with binary vectors harbouring genes that code for γ-zein and β-zein, two zeins rich in sulphur amino acids. Adding the ER retention signal KDEL to the C-terminal domain modified the zein polypeptides. Significant levels of γ-zein:KDEL and β-zein:KDEL were detected in primary transformants of tobacco. Moreover, the two zeins colocalized in leaf protein bodies of γ-/β-zein:KDEL plants derived from a cross between two primary transformants. Coexpression of γ-zein:KDEL and β-zein:KDEL could be a useful strategy to obtain genotypes of forage legumes which are able to accumulate sulphur amino acids to high levels. As a first step, L. corniculatus plants expressing γ-zein:KDEL in the leaves were obtained. This revised version was published online in June 2006 with corrections to the Cover Date.     

“Egg transformation” induced by irradiated pollen in Nicotiana: critical appraisal of Chyi and Sanford's observations

Summary This note strongly refutes the suggestion by Chyi and Sanford (1985) that egg transformation by the use of lethally irradiated pollen in Nicotiana reported by the present author could be explained on the basis of mutation, contamination or other causes, and suggests that their conclusion is based on faulty experimentation and interpretation. It also shows that, contrary to these authors' assertions, their results, in fact, contain certain significant demonstrations of egg transformation supporting the present author's work.     

β-glucuronidase gene expression and mRNA stability in oat protoplasts

Summary Protoplasts derived from oat (Avena sativa L.) suspension culture cells (7 days after subculturing) were electroporated with plasmid DNA containing the Escherichia coli uidA gene encoding the ß-glucuronidase reporter enzyme. Consistently high enzyme activity was observed with electroporation conditions of 500 F and 1125 volts/cm. Enzyme activity and mRNA accumulation time courses were determined. The maximum enzyme activity was detected at 24 hours after electroporation, while the maximum mRNA level was detected at 12 hours after electroporation. ß-glucuronidase mRNA was in vitro synthesized with and without a 5 methylated cap and then electroporated into protoplasts. Only capped mRNA produced significant enzyme activity. By electroporating radiolabeled, in vitro synthesized mRNA, the ß-glucuronidase mRNA half-life was estimated to be 35 minutes in oat protoplasts.Abbreviations GUS ß-glucuronidase - mRNA messenger RNA - ICP insecticidal crystal proteins - OCS octopine synthase - CAT chloramphenicol acetyltransferase - nt nucleotide - kb kilobase - MSOD3 Murashige and Skoog media with zero 2,4-dichlorophenoxy acetic acid and 3% sucrose - MU 4-methyl umbelliferone; ATA: aurintricarboxylic acid     

Isoforms of green fluorescent protein differ from each other in solvent molecules ‘trapped’ inside this protein

Green fluorescent protein (GFP) has been studied quite thoroughly, however, up to now some experimental data have not been explained explicitly. For example, under native conditions this protein can have two isoforms differing in their mobility in gel. In this case, no differences between the isoforms are revealed under denaturing conditions. In order to understand the difference in the isoforms of this protein, we have investigated GFP-cycle3 using mass spectrometry, gel electrophoresis, size exclusion chromatography, microcalorimetry, and spectroscopy methods under varying conditions. We have also designed and studied three mutant forms of this protein with substitutions of amino acid residues inside the GFP barrel. The mutations have allowed us to influence the formation of different GFP isoforms. Each of the mutant proteins has predominantly only one isoform. As a result of the performed research, it can be concluded that most likely the GFP isoforms differ in the solvent molecules ‘trapped’ inside the GFP barrel. In their turn, these molecules have an effect on the protein charge and consequently on its mobility at electrophoresis under native conditions.     

Fusions between green fluorescent protein and β-glucuronidase as sensitive and vital and vital bifunctional reporters in plants

Plant Molecular Biology -