Reducing complexity when studying seed dispersal at community scales: a functional classification of vertebrate seed dispersers in tropical forests

The process of seed dispersal has a profound effect on vegetation structure and diversity in tropical forests. However, our understanding of the process and our ability to predict its outcomes at a community scale are limited by the frequently large number of interactions associated with it. Here, we outline an approach to dealing with this complexity that reduces the number of unique interactions considered by classifying the participants according to their functional similarity. We derived a classification of dispersers based on the nature of the dispersal service they provide to plants. We described the quantities of fruit handled, the quality of handling and the diversity of plants to which the service is provided. We used ten broad disperser traits to group 26 detailed measures for each disperser. We then applied this approach to vertebrate dispersers in Australia’s tropical forests. Using this we also develop a classification that may be more generally applicable. For each disperser, data relating to each trait was obtained either from the field or published literature. First, we identified dispersers whose service outcomes were so distinct that statistical analysis was not required and assigned them to functional groups. The remaining dispersers were assigned to functional groups using cluster analysis. The combined processes created 15 functional groups from 65 vertebrate dispersers in Australian tropical forests. Our approach—grouping dispersers on the basis of the type of dispersal service provided and the fruit types it is provided to—represents a means of reducing the complexity encountered in tropical seed dispersal systems and could be effectively applied in community level studies. It also represents a useful tool for exploring changes in dispersal services when the distribution and abundance of animal populations change due to human impacts. Electronic Supplementary Material Supplementary material is available to authorised users in the online version of this article at .     

Elevated air temperature alters an old-field insect community in a multifactor climate change experiment

To address how multiple, interacting climate drivers may affect plant–insect community associations, we sampled insects that naturally colonized a constructed old‐field plant community grown for over 2 years under simultaneous CO₂, temperature, and water manipulation. Insects were sampled using a combination of sticky traps and vacuum sampling, identified to morphospecies and the insect community with respect to abundance, richness, and evenness quantified. Individuals were assigned to four broad feeding guilds in order to examine potential trophic level effects. Although there were occasional effects of CO₂ and water treatment, the effects of warming on the insect community were large and consistent. Warming significantly increased Order Thysanoptera abundance and reduced overall morphospecies richness and evenness. Nonmetric multidimensional scaling found that only temperature affected insect community composition, while a Sørensen similarity index showed less correspondence in the insect community between temperature treatments compared with CO₂ or soil water treatments. Within the herbivore guild, elevated temperature significantly reduced richness and evenness. Corresponding reductions of diversity measures at higher trophic levels (i.e. parasitoids), along with the finding that herbivore richness was a significant predictor of parasitoid richness, suggest trophic‐level effects within the insect community. When the most abundant species were considered in temperature treatments, a small number of species increased in abundance at elevated temperature, while others declined compared with ambient temperature. Effects of temperature in the dominant insects demonstrated that treatment effects were limited to a relatively small number of morphospecies. Observed effects of elevated CO₂ concentration on whole‐community foliar N concentration did not result in any effect on herbivores, which are probably the most susceptible guild to changes in plant nutritional quality. These results demonstrate that climatic warming may alter certain insect communities via effects on insect species most responsive to a higher temperature, contributing to a change in community structure.     

Heart targeting of retroviral expression in avian embryos: a species-independent phenomenon

A replication-incompetent retroviral vector derived from spleen necrosis virus (SNV), in which the viral structural genes gag, pol, and env were replaced with the bacterial -galactosidase gene lacZ, was used to infect embryos from outbred and inbred chicken lines, japanese quail and duck between embryonic day 0 and 13. LacZ expression was restricted to a few organs or cell types, and this distribution was not influenced by the different routes of inoculation tested but was specified by the age of the embryo at the time of inoculation. Inoculations at E0-E1 beneath or onto the blastodisc resulted in lacZ expression in ectodermal derivatives, i.e. skin and neural structures. From E2 onwards, heart muscle and skin were the preferential targets in all the species or inbred lines tested. Heart muscle was positive in 100% of the embryos displaying lacZ+ clones. Skin exhibited on and off periods depending on the age at inoculation. No lacZ-positive clones were detected in chick embryos infected after Ell. Outbred chick embryos displayed the largest array of organs labelled (heart, skin, liver, gizzard) while quail and duck embryos exhibited a more restrictive pattern. These results are of import if the vector is to be used as a tool to map lineages or to transfer genes into the developing embryo.     

Dietary niche breadth in a local community of passerine birds: an analysis using phylogenetic contrasts

The analysis of a local community of forest passerines (13 species) using phylogenetic contrasts shows a correlation between body size of bird species and mean prey size, minimum prey size, maximum prey size and the size range of dietary items. This suggests that larger birds drop small prey taxa from their prey list, because of the difficulty of capturing very small prey, for energetic reasons or because of microhabitat usage. We find some support for the third hypothesis. Dietary niche breadth calculated across prey taxa is not related to body size. Dietary niche breadth, however, is correlated with size-corrected measurements of the bill and locomotor apparatus. Long and slender bills increase the dietary niche breadth. Thus subtle differences constrain foraging and the techniques of extracting certain prey taxa form crevices. Dietary niche breadth and foraging diversity are positively correlated with population density: at least locally dietary generalists occur at higher breeding densities than specialists.     

瑞典南部落叶林动物对种子捕食的实验研究

在瑞典南部落叶林,于1985年和1986年秋季分别研究了不同动物对欧洲七叶树、夏栎、山楂和黑刺李等4种种子的捕食作用,即种子释放1周后被动物捕食的情况。实验分以下3种处理:排除小兽和鸟、排除鸟和对照(小兽和鸟均不排除),但昆虫可进入所有处理。在不同落叶林和小型林地共建有16个重复实验,即每个林分类型于每年秋季各设4个重复。在所有林分(包括落叶林和小型林地),不同处理的种子捕食表明:小兽是欧洲七叶树、夏栎和黑刺李等植物种子的主要捕食者,而无脊椎动物则是山楂种子的重要捕食者,但鸟类很少取食上述种子,因而捕食作用极小。在其中1年,动物对种子的总捕食率在落叶林和小型林地存在较大差异,以小型林地较高。     

Floristic assessment of an Afromontane grassland fragmentation experiment in a pine plantation

Twenty-four grassland fragments were established in an area of high botanical diversity planted with Pinus patula plantations. This area is representative of the eastern Drakensberg escarpment, containing a large number of endemic plant taxa. The experimental fragments comprise six replicates of two fragment sizes (0.25 and 1.5 ha), with a similar grouping of control plots in adjacent undisturbed grassland designated for conservation. The plots form the basis of a long-term study on fragmented plant and animal communities. Vegetation surveys were performed using nearest neighbour step point and Braun–Blanquet techniques. Analysis of similarity (anosim ) indicates that in neither the large nor small fragments do the control plots differ significantly in floristic structure from the experimental fragments. Five variations of the Themeda triandra-dominated grassland were identified, corresponding to slight variations in ground moisture. The experimental fragments and control plots were sufficiently similar to be analysed as replicates within the fragmentation study. This forms the foundation for the long-term analysis of plant communities within the fragments, as well as for analyses of insect and vertebrate communities within the fragments.     

Parasites in space and time: a case study of haemosporidian spatiotemporal prevalence in urban birds

Prevalence responses to anthropic factors differ across hosts and parasite species. We here analyzed the spatiotemporal variation of avian haemosporidian prevalence in bird assemblages of the Mooswald forest (i.e., urban greenspace; Freiburg, Germany), in response to local environmental features (e.g., water sources, human presence (visited)/absence (unvisited)) and bird-level traits (e.g., body condition, age, sex) in 2?years. We used a nested PCR protocol (mitochondrial (mt)DNA cytochrome b (cyt b) gene) and microscopy to determine haemosporidian infections. Prevalence was analyzed using a general linear multi-model (glmulti) approach with Akaike information criterion corrected for small samples (AICc), with subsequent model inferences using a GLMM on the best selected model, considering bird species as a random factor. Analyses were conducted for the main understory bird species (Blackcap – Sylvia atricapilla, Chaffinch – Coereba flaveola, Great Tit – Parus major, Blue Tit – Cyanistes caeruleus, European Robin – Erithacus rubecula, Blackbird – Turdus merula, Song Thrush – Turdus philomelos). We further conducted spatial autocorrelation analyses for all haemosporidian infections, and classification and regression trees (CARTs) for focal species. We analyzed a total of 544 samples of seven bird species. In 2011 prevalence for Haemoproteus/Plasmodium was 25.8% and 11.7% for Leucocytozoon. In 2013 prevalence for Haemoproteus/Plasmodium was 26.5% and 35.5% for Leucocytozoon. Haemosporidian prevalence was significantly different between some focal species. There was a negative association between distance to the nearest water source and prevalence in the year 2011, and the opposite pattern for the year 2013. However, when analyzed for the six focal species separately, such a relationship could change from a negative to a positive one, or there could be no relationship at all. For Leucocytozoon there was higher prevalence in the section of the forest visited by humans. We did not find spatial autocorrelation for prevalence across the study site, but there were statistically significant local spatial clusters in the visited section. Although there were similar responses of prevalence to some factors, infection patterns were generally bird species-specific. Thus, prevalence is a labile epidemiological parameter, varying spatiotemporally in an idiosyncratic way.     

Avoiding Predators: Expectations and Evidence in Primate Antipredator Behavior

Predation and antipredator behavior are important but poorly studied influences on the evolution of primate societies. I review recent evidence of predation and antipredator strategies among primates. I describe patterns of antipredator behavior and attempt to explain the variation among primate taxa and among antipredator strategies. I use predation by chimpanzees on red colobus and antipredator strategies by the colobus as a case study of how a primate prey species may respond to the threat of predation.     

Microbial community structure and functions differ between native and novel (exotic-dominated) grassland ecosystems in an 8-year experiment

Plant and Soil - Grasslands dominated by non-native (exotic) species have replaced purely native-dominated areas in many parts of the world forming ‘novel’ ecosystems. Altered...     

Different nest predator faunas and nest predation risk on ground and shrub nests at forest ecotones: an experiment and a review

This study examined predator faunas of artificial ground and shrub nests and whether nest predation risk was influenced by nest site, proximity to forest edge, and habitat structure in 38 grassland plots in south-central Sweden. There was a clear separation of predator faunas between shrub and ground nests as identified from marks in plasticine eggs. Corvids accounted for almost all predation on shrub nests whereas mammals mainly depredated ground nests. Nest predation risk was significantly greater for shrub than for ground nests at all distances (i.e. 0, 15 and 30 m) from the forest edge. However, nest predation risk was not significantly related to distance to forest edge, but significantly increased with decreasing distance to the nearest tree. Different corvid species robbed nests at different distances from the forest edge, with jays robbing nests closest to edges. We conclude that the relationship between the predation risk of grassland bird nests and distance to the forest edge mainly depends on the relative importance of different nest predator species and on the structure of the forest edge zone. A review of published articles on artificial shrub and ground nest predation in the temperate zone corroborated the results of our own study, namely that shrub nests experienced higher rates of depredation in open habitats close to the forest edge and that avian predators predominantly robbed shrub nests. Furthermore, the review results showed that predation rates on nests in general are highest <50 m inside the forest and lower in open as well as forest interior habitats (≥50 m from the edge). Received: 16 March 1998 / Accepted: 30 July 1998     

Forward hysteresis and backward bifurcation caused by culling in an avian influenza model

The emerging threat of a human pandemic caused by the H5N1 avian influenza virus strain magnifies the need for controlling the incidence of H5N1 infection in domestic bird populations. Culling is one of the most widely used control measures and has proved effective for isolated outbreaks. However, the socio-economic impacts of mass culling, in the face of a disease which has become endemic in many regions of the world, can affect the implementation and success of culling as a control measure. We use mathematical modeling to understand the dynamics of avian influenza under different culling approaches. We incorporate culling into an SI model by considering the per capita culling rates to be general functions of the number of infected birds. Complex dynamics of the system, such as backward bifurcation and forward hysteresis, along with bi-stability, are detected and analyzed for two distinct culling scenarios. In these cases, employing other control measures temporarily can drastically change the dynamics of the solutions to a more favorable outcome for disease control.     

Effects of water-level fluctuations on the littoral benthic fish community in lakes: a mesocosm experiment

Changes in the water level of lakes, either natural or man-made,are important environmental perturbations for eulittoral benthicfish communities. In outdoor mesocosm experiments, we testedthe effects of decreasing shelter availability due to autumnlake-level decrease on the behavior and the growth of two littoralbenthic dwellers, the juvenile burbot and the stone loach. Thetwo species showed significantly different changes in behaviorwhen shelter availability decreased. Burbot built up a distincthierarchy when shelter became sparse, with larger fish beingsignificantly more successful in competing for suitable shelterthan smaller conspecifics. The hierarchy, however, ceased whenshelter availability decreased below a certain level. The largestfish then increasingly abandoned shelter use, while smallerfish persisted with their sheltering behavior. Stone loach,in contrast, showed no hierarchical order or size-related shelteruse. Only burbot showed a significant relationship between theability to occupy the preferred shelter and the somatic growth.These two species provide an example of different strategiesto deal with environmental perturbations like lake-level decrease,with the stenoecious, dominant strategy of the burbot and theeuryoecious, evasive strategy of stone loach. The results demonstratethe importance of conducting behavioral studies under as naturalconditions as possible.     

Trophic exploitation in grassland food chains: simple models and a field experiment

This study provides insight into the importance of top carnivores (top-down control) and nutrient inputs (bottom-up control) in structuring food chains in a terrestrial grassland system. Qualitative predictions about food chain structure are generated using 4 simple models, each differing in assumptions about some key component in the population dynamics of the herbivore trophic level. The four model systems can be classified broadly into two groups (1) those that assume plant resource intake by herbivores is limited by search rate and handling time as described by classic Lotka-Volterra models; and (2) those that assume plant resource intake by herbivores is limited externally by the supply rate of resources as described by alternatives to Lotka-Volterra formulations. The first class of models tends to ascribe greater importance to top-down control of food chain structure whereas the second class places greater weight on bottom-up control. I evaluated the model predictions using experimentally assembled grassland food chains in which I manipulated nutrient inputs and carnivore (wolf spider) abundance to determine the degree of top-down and bottom-up control of grassland plants and herbivores (grasshoppers). The experimental results were most consistent with predictions of the second class of models implying a predominance of bottom-up control of food chain structure.     

Spatial heterogeneity in a grassland community: Use of power law

A new regression analysis was proposed to evaluate the degree of spatial heterogeneity for individual species comprising a plant grassland community. The weighted average of the heterogeneity value of all the species comprising the community provides a measure of community-level heterogeneity. A field survey was carried out, as an example, in order to analyze the spatial heterogeneity of a pasture with grazing cows, using 100 quadrats 50 cm × 50 cm, each of which was divided into four smaller quadrats 25 cm × 25 cm, on a 50 m long line-transect. The frequency of occurrence for all the species in each small quadrat was recorded. The regression associated with the ratio of the theoretical and observed variances of occurence counts was used to analyse the frequency distribution of species in a pasture community. A good fit to the regression for the whole community was obtained. These results indicate that (i) each species in the example was distributed more heterogeneously than a random pattern; and (ii) the regression could well describe the spatial heterogeneity of the grassland plant community. In most of the observed species, spatial heterogeneity is often characterized by species-specific propagation traits and the architecture of plant bodies. Thus, the spatial patterns of a grassland community can be evaluated in detail by this power-law approach. This measure is suitable for field surveys and comparative studies of grassland communities, and for other plant communities that are generally short in height.     

The role of biodiversity for element cycling and trophic interactions: an experimental approach in a grassland community

The focus of a new experiment, set up in Jena in spring 2002, are the effects of biodiversity on element cycles and the interaction of plant diversity with herbivores and soil fauna. The experimental design explicitly addresses criticisms provoked by previous biodiversity experiments. In particular, the choice of functional groups, the statistical separation of sampling versus complementarity effects, and testing for the effects of particular functional groups differ from previous experiments. Based on a species pool of 60 plant species common to the Central European Arrhenatherion grasslands, mixtures of one to 16 (60) species and of one to four plant functional groups were established on 90 plots (20 m × 20 m) with nested experiments. In order to test specific hypotheses 390 additional small-area plots (3.5 m × 3.5 m) were set-up. Exact replicates of all species mixtures serve to assess the variability in ecosystem responses. In a dominance experiment, the effects of interactions among nine selected highly productive species are studied. Each species is grown as monoculture replicated once.Effekte der Biodiversität auf Elementkreisläufe und Wechselwirkungen der pflanzlichen Artenvielfalt mit Bodenfauna und Herbivoren stehen im Mitttelpunkt eines neuen Experiments, das im Frühjahr 2002 in Jena eingerichtet wurde. Das Versuchsdesign berücksichtigt ausdrücklich die Kritik, die an den Aufbau früherer Biodiversitätsversuche gerichtet wurde. Die Auswahl funktioneller Gruppen von Pflanzenarten, die statistischen Möglichkeiten, die Effekte des “Sampling” gegen Komplementarität zu trennen sowie den Einfluß funktioneller Gruppen zu überprüfen, unterscheiden dieses Experiment von früheren Versuchen. Sechzig typische Pflanzenarten der zentraleuropäischen Frischwiesen (Arrhenatherion) bilden den Artenpool für den Versuch. Auf 90 Flächen wurden Artenmischungen etabliert, die 1 bis 16 (60) Arten und 1 bis 4 funktionelle Gruppen dieser Pflanzenarten enthalten. Die Versuchsparzellen haben eine Größe von 20 m × 20 m, auf denen in genesteter Anordnung verschiedene Teilexperimente durchgeführt werden. Zusätzlich wurden 390 kleine Parzellen (3.5 m × 3.5 m) angelegt, um spezifische Hypothesen zu überprüfen. Alle Arten werden hier mit je einer Wiederholung als Monokulturen kultiviert. Identische Wiederholungen aller Artenmischungen sollen deren Variabilität untersuchen. In einem Dominanz-Versuch werden die Effekte der Wechselwirkungen zwischen 9 ausgewählten hochproduktiven Arten untersucht.     

The Visually Mediated Escape Response in Fish: Predicting Prey Responsiveness and the Locomotor Behaviour of Predators and Prey

The outcome of predator-prey encounters is determined by a number of factors related to the locomotor and sensory performance of the animals. Escape responses can be triggered visually, i.e. by the magnifying retinal image of an approaching object (i.e. a predator), called the looming effect, and calculated as the rate of change of the angle subtended by the predator frontal profile as seen by the prey. A threshold of looming angle (ALT, the Apparent Looming Threshold) determines the reaction distance of a startled fish, which is proportional to the attack speed of the predator and its apparent frontal profile. Optimal tactics for predator attacks as well as consideration on their functional morphology are discussed in relation to ALT. Predator optimal attack speeds depend on predator morphology as well as the prey ALT. Predictions on the scaling of ALT suggest that ALT may increase (i.e. implying a decrease in reaction distance) with prey size in cases in which predator attack speeds are high (i.e. > 4 L/s in a 1-m long predator), while it may be relatively independent of prey size when predators attack at lower speeds. The issue of scaling of ALT is discussed using examples from field and laboratory studies. While the timing of the escape is a crucial issue for avoiding being preyed upon, the direction of escape manoeuvres may also determine the success of the escape. A simple theoretical framework for optimal escape trajectories is presented here and compared with existing data on escape trajectories of fish reacting to startling stimuli.     

ASW: a gene with conserved avian W-linkage and female specific expression in chick embryonic gonad

Vertebrates exhibit a variety of sex determining mechanisms which fall broadly into two classes: environmental or genetic. In birds and mammals sex is determined by a genetic mechanism. In mammals males are the heterogametic sex (XY) with the Y chromosome acting as a dominant determiner of sex due to the action of the testis-determining factor, SRY. In birds females are the heterogametic sex (ZW); however, it is not known whether the W chromosome carries a dominant ovary-determining gene, or whether Z chromosome dosage determines sex. Using an experimental approach, which assumes only that the sex-determining event in birds is accompanied by sex-specific changes in gene expression, we have identified a novel gene, ASW (Avian Sex-specific W-linked). The putative protein for ASW is related to the HIT (histidine triad) family of proteins. ASW shows female-specific expression in genital ridges and maps to the chicken W chromosome. In addition, we show that, with the exception of ratites, ASW is linked to the W chromosome in each of 17 bird species from nine different families of the class Aves. Received: 18 October 1999 / Accepted: 10 January 2000     

Robust and ubiquitous GFP expression in a single generation of chicken embryos using the avian retroviral vector,RCASBP

Functional genomics in avian models has lagged behind that of mammals, and the production of transgenic birds has proven to be challenging and time-consuming. All current methods rely upon breeding chimeric birds through at least one generation. Here, we report a rapid method for the ubiquitous expression of GFP in chicken embryos in a single generation (G-0), using the avian retroviral vector, Replication-Competent Avian sarcoma-leukosis virus, with a Splice acceptor, Bryan RSV Pol (RCASBP). High-titre RCASBP retrovirus carrying eGFP was injected into unincubated (stage X) blastoderms in ovo. This resulted in stable and widespread expression of eGFP throughout development in a very high proportion of embryos. Transgenic tissues were identified by fluorescence and immunohistochemistry. These results indicate that chicken blastodermal cells are permissive for infection by the RCASBP virus. This system represents a rapid and efficient method of producing global gene expression in the chicken embryo. The method can be used to generate avian cells with a stable genetic marker, or to induce global expression of a gene of choice. Interestingly, in day 8.5 embryos, somatic cells the embryonic gonads were predominantly GFP positive but primordial germ cells were GFP negative, indicating viral silencing in the embryonic germline. This dichotomy in the gonads allows the isolation or enrichment of the germ cells through negative selection during embryonic stages. This transgenic chicken model is of value in developmental studies, and for the isolation and study of avian primordial germ cells.     

Differentiation of avian neural crest cells in vitro: Absence of a developmental bias toward melanogenesis

Summary Neural crest cells from quail embryos grown in standard culture dishes differentiate almost entirely into melanocytes within 4 or 5 days when chick embryo extract (CEE) or occasional lots of fetal calf serum (FCS) are included in the medium. Gel fractionation showed that the pigment inducing factor(s) present in these media is of high molecular weight (> 400 K daltons). In the absence of CEE, the neural tube can also stimulate melanocyte differentiation. Culture medium supplemented by selected lots of FCS permits crest cell proliferation but little overt differentiation after up to 2 weeks in culture if the neural tube is removed within 18 h of explantation in vitro. Subsequent addition of CEE to such cultures promotes complete melanocyte differentiation. Crest cells from White leghorn chick embryos also differentiate into melanocytes in the presence of CEE, but do not survive well in its absence. Melanocyte differentiation of crest cells from both quail and chick embryos can by suppressed by culturing under a dialysis membrane, even in the presence of the neural tube and CEE, but neuronal differentiation appears greatly enhanced.