Automatic analysis of longitudinal growth data on the website willi-will-wachsen.de

Many disorders of child development can only be treated successfully when they are detected early. Thus, child development should be checked periodically. Usually, a few parameters are sufficient to check whether or not a child is developing normally in terms of growth. By making such checks publicly available on the website: willi-will-wachsen.de the authors hope to provide a tool which helps the automatization of simple check procedures and thereby detect with less effort more children with growth disorders.     

Chronobiology meets the need for integration in a reductionist climate of biology and medicine.

One of us introduces a chronobiology course to students at the University of Milan, Italy, with a succinct statement that may well serve to summarize the foregoing 24 points. Its few lines distill the preceding details and formulate the raison d'être of Chronobiology: Chronobiology is: not only a science in its own right; not only a methodology; not only a new kind of statistical analysis; not just an aspect of biology, but a new way of invariably approaching any problem in biology, notably medicine.     

Practice induces function-specific changes in brain activity

Background

Practice can have a profound effect on performance and brain activity, especially if a task can be automated. Tasks that allow for automatization typically involve repeated encoding of information that is paired with a constant response. Much remains unknown about the effects of practice on encoding and response selection in an automated task.

Methodology

To investigate function-specific effects of automatization we employed a variant of a Sternberg task with optimized separation of activity associated with encoding and response selection by means of m-sequences. This optimized randomized event-related design allows for model free measurement of BOLD signals over the course of practice. Brain activity was measured at six consecutive runs of practice and compared to brain activity in a novel task.

Principal Findings

Prompt reductions were found in the entire cortical network involved in encoding after a single run of practice. Changes in the network associated with response selection were less robust and were present only after the third run of practice.

Conclusions/Significance

This study shows that automatization causes heterogeneous decreases in brain activity across functional regions that do not strictly track performance improvement. This suggests that cognitive performance is supported by a dynamic allocation of multiple resources in a distributed network. Our findings may bear importance in understanding the role of automatization in complex cognitive performance, as increased encoding efficiency in early stages of practice possibly increases the capacity to otherwise interfering information.     

Estimation of mental effort in learning visual search by measuring pupil response

Perceptual learning refers to the improvement of perceptual sensitivity and performance with training. In this study, we examined whether learning is accompanied by a release from mental effort on the task, leading to automatization of the learned task. For this purpose, we had subjects conduct a visual search for a target, defined by a combination of orientation and spatial frequency, while we monitored their pupil size. It is well known that pupil size reflects the strength of mental effort invested in a task. We found that pupil size increased rapidly as the learning proceeded in the early phase of training and decreased at the later phase to a level half of its maximum value. This result does not support the simple automatization hypothesis. Instead, it suggests that the mental effort and behavioral performance reflect different aspects of perceptual learning. Further, mental effort would be continued to be invested to maintain good performance at a later stage of training.     

0-1整数规划问题的半自动化DNA计算模型

对一般的0—1整数规划问题提出了一种半自动化的DNA计算模型。首先产生所给定的0—1整数规划问题的所有可能解,然后设置对应于0—1整数规划问题的约束不等式的探针,利用这些探针设计半自动化装置对所有可能解进行自动分离,最终找出0—1整数规划问题的解。该模型的最大优点在于具有自动化的特点;同时,从理论上来讲,该模型适合含有任意变量的任意0—1整数规划问题的求解。     

Young queens of the harvesting antMessor semimfus avoid founding in places visited by conspecific workers

Summary Founding queens of the seed-harvesting antMessor semirufus (André) (Hymenoptera: Myrmicinae) were offered a choice between two areas: one just visited and one not visited by workers of the same species. The queens preferred to dig their nest in the area not marked by workers. This may be an adaptation to avoid exploitation competition and active destruction of the new nest by workers of large, established colonies.     

Learning by Observation: Insights from Williams Syndrome

Observing another person performing a complex action accelerates the observer’s acquisition of the same action and limits the time-consuming process of learning by trial and error. Observational learning makes an interesting and potentially important topic in the developmental domain, especially when disorders are considered. The implications of studies aimed at clarifying whether and how this form of learning is spared by pathology are manifold. We focused on a specific population with learning and intellectual disabilities, the individuals with Williams syndrome. The performance of twenty-eight individuals with Williams syndrome was compared with that of mental age- and gender-matched thirty-two typically developing children on tasks of learning of a visuo-motor sequence by observation or by trial and error. Regardless of the learning modality, acquiring the correct sequence involved three main phases: a detection phase, in which participants discovered the correct sequence and learned how to perform the task; an exercise phase, in which they reproduced the sequence until performance was error-free; an automatization phase, in which by repeating the error-free sequence they became accurate and speedy. Participants with Williams syndrome beneficiated of observational training (in which they observed an actor detecting the visuo-motor sequence) in the detection phase, while they performed worse than typically developing children in the exercise and automatization phases. Thus, by exploiting competencies learned by observation, individuals with Williams syndrome detected the visuo-motor sequence, putting into action the appropriate procedural strategies. Conversely, their impaired performances in the exercise phases appeared linked to impaired spatial working memory, while their deficits in automatization phases to deficits in processes increasing efficiency and speed of the response. Overall, observational experience was advantageous for acquiring competencies, since it primed subjects’ interest in the actions to be performed and functioned as a catalyst for executed action.     

Fast one-step procedure for the detection of nucleic acids in situ by primer-induced sequence-specific labeling with fluorescein-12-dUTP.

We provide fast, simple, one-step procedures for sequence-specific detection of nucleic acids in situ. Tandem repeat sequences in DNA are stained within 30 min, and mRNA is stained within 2 h. The procedures are based on the incorporation of the newly available fluorescein-labeled dUTP into DNA synthesized in situ by primed in situ labeling, with denatured fragments of cloned DNA or oligonucleotides as primers. The extreme speed and simplicity of the reaction make it attractive for automatization in routine laboratory procedures and opens up new diagnostic possibilities.     

病毒与宿主互利共生的研究

在病毒与其宿主的相互作用中,病毒所扮演的角色不仅仅是病原体,它们也是宿主保持健康的重要共生体。病毒与微生物、植物、昆虫和哺乳动物之间存在互利共生作用,有的甚至涉及共生功能体的多个生物体。随着新病毒的不断发现,越来越多的互利共生关系被发掘,也还有许多有待发掘。本文旨在突出一些近年来关于有益病毒的典型例子,阐明为何需要重新认识病毒——病毒不仅是病原体,同时也是共生功能体中的一个完整个体。     

Kinetic pulse-labeling study of Fusarium culmorum. Biosynthetic intermediates and dead-end metabolites

A kinetic pulse-labeling method was utilized in Fusarium culmorum to detect plausible biosynthetic intermediates and differentiate them from dead-end metabolites. The ultimate test to demonstrate a precursor relies on feeding experiments. We now report the detection of four new metabolites, one of them (compound 1) behaves as a dead-end metabolite, whereas compounds 2, 3, and 4 seem to be putative intermediates: they metabolize with time just when 3-acetyldeoxynivalenol (3-ADN) and/or sambucinol (SOL) start to be produced. Feeding experiments confirmed these results: compound 1 is not converted to 3-ADN or SOL, and compounds 2-4 are precursors to 3-ADN. In addition 3 is a precursor to SOL.     

A single-reaction method for DNA sequence determination.

A chemical method for the determination of DNA sequence is presented. Heating of DNA, labeled at a single 3' extremity, in the presence of formamide results in efficient cleavage of phosphodiester bonds 3' of A, G, and C residues. The relative efficiency is A = G greater than C. The bias between A and G is solved by a simple pretreatment (photoreaction in methylene blue) followed by heating in formamide. The entire procedure does not require any intermediate purification step or handling of hazardous chemicals and allows determination of the sequence on only two electrophoretic lanes. Its simplicity and rapidity favor automatization.     

The correlations of the evoked activity of the auditory cortex and amygdala in cats during conditioned reflex activities]

By averaged summary activity of symmetric points of the cat auditory cortex and amygdala evoked by sound, the character of interaction (Spirman coefficient of correlation) was determined between the structures before, at elaboration, at extinction and restoration of instrumental food-procuring reflex and also at automatization of the reflex. Individual character of co-tuning of the cortex and amygdala was found at adaptation of the animal, changing into close interconnections at formation of the reflex and into disturbance of their correlation at its extinction. Stabilization of the reflex up to the stage of automatization was accompanied by the weakening of connections between the cortex and amygdala. The results testify to complex and dynamic character of interaction in the system cortex-amygdala in conditioned activity.     

Reorganization and plasticity in the adult brain during learning of motor skills

On the basis of brain imaging studies, Doyon and Ungerleider recently proposed a model describing the cerebral plasticity that occurs in both cortico-striatal and cortico-cerebellar systems of the adult brain during learning of new motor skilled behaviors. This theoretical framework makes several testable predictions with regards to the contribution of these neural systems based on the phase (fast, slow, consolidation, automatization, and retention) and nature of the motor learning processes (motor sequence versus motor adaptation) acquired through repeated practice. There has been recent behavioral, lesion and additional neuroimaging studies that have addressed the assumptions made in this theory that will help in the revision of this model.     

Dynamic pattern generation in cell membranes: Current insights into membrane organization

It has been two decades since the lipid raft hypothesis was first presented. Even today, whether these nanoscale cholesterol-rich domains are present in cell membranes is not completely resolved. However, especially in the last few years, a rich body of literature has demonstrated both the presence and the importance of non-random distribution of biomolecules on the membrane, which is the focus of this review. These new developments have pushed the experimental limits of detection and have brought us closer to observing lipid domains in the plasma membrane of live cells. Characterization of biomolecules associated with lipid rafts has revealed a deep connection between biological regulation and function and membrane compositional heterogeneities. Finally, tantalizing new developments in the field have demonstrated that lipid domains might not just be associated with the plasma membrane of eukaryotes but could potentially be a ubiquitous membrane-organizing principle in several other biological systems. This article is part of a Special Issue entitled: Emergence of Complex Behavior in Biomembranes edited by Marjorie Longo.     

Supertree algorithms for ancestral divergence dates and nested taxa

MOTIVATION: Supertree methods have been often identified as a possible approach to the reconstruction of the 'Tree of Life'. However, a limitation of such methods is that, typically, they use just leaf-labelled phylogenetic trees to infer the resulting supertree. RESULTS: In this paper, we describe several new supertree algorithms that extend the allowable information that can be used for phylogenetic inference. These algorithms have been recently implemented and we describe here two illustrative applications. AVAILABILITY: These new algorithms are freely available for application at http://darwin.zoology.gla.ac.uk/cgi-bin/build.pl.     

Circulating in difference: performances of publicity on and beyond a Yangon train

Amid Myanmar's fraught democratic transition, some local Pentecostals took up new opportunities to publicly evangelize to Buddhists, efforts that were met mostly with indifference. This article explores the role of indifference in mediating encounters across difference. Drawing together scholarship on recognition and sincerity, it argues that these evangelists were occupied not just with the challenges of hailing an audience in a tentatively more open public sphere, albeit one shot through with heightened tension around religious belonging; they were also concerned with what I call the performance of publicity: the ways in which publicity is itself publicized, celebrated, circulated, and received – especially online.     

Integral equation methods for computing likelihoods and their derivatives in the stochastic integrate-and-fire model

We recently introduced likelihood-based methods for fitting stochastic integrate-and-fire models to spike train data. The key component of this method involves the likelihood that the model will emit a spike at a given time t. Computing this likelihood is equivalent to computing a Markov first passage time density (the probability that the model voltage crosses threshold for the first time at time t). Here we detail an improved method for computing this likelihood, based on solving a certain integral equation. This integral equation method has several advantages over the techniques discussed in our previous work: in particular, the new method has fewer free parameters and is easily differentiable (for gradient computations). The new method is also easily adaptable for the case in which the model conductance, not just the input current, is time-varying. Finally, we describe how to incorporate large deviations approximations to very small likelihoods. Action Editor: Barry J. Richmond