利用ERIC-PCR对苏云金芽胞杆菌与蜡状芽胞杆菌进行鉴定的研究

为了探索ERIC-PCR技术在苏云金芽胞杆菌和蜡状芽胞杆菌的鉴定及分型中的应用价值,本研究采用PCR方法初步检测苏云金芽胞杆菌杀虫晶体蛋白基因的组成,并对苏云金芽胞杆菌和蜡状芽胞杆菌的总DNA进行ERIC-PCR扩增,分析ERIC-PCR指纹图谱的特点并采用NTSYS2.10软件对其进行聚类。结果显示,各菌株的ERIC指纹图谱表现出不同程度的多态性,但图谱与菌株所含cry基因的类型存在一定的相关性。聚类分析结果显示,含有相同或相近cry基因类型的Bt菌株在进化树上趋向聚为一类,而不含cry基因的蜡状芽胞杆菌趋向于与不含cry基因的Bt菌株聚为一类或单独聚类。若在多种模式菌株的参考下,该方法可用于苏云金芽胞杆菌的初步鉴定和分型。     

一株替代粪肠球菌的生产用芽胞杆菌筛选及其性质

目的 筛选1株能够产业化、替代粪肠球菌的芽胞杆菌。方法 从健康鸡、鸭、仔猪的粪便与肠道内容物中筛选,采用选择性培养基和耐酸耐胆盐发酵,通过耐人工肠液和人工胃液试验与粪肠球菌比较得到1株产酸能力较好的替代粪肠球菌的芽胞杆菌,并对其性质进行研究。结果 所筛选的芽胞杆菌（GY0520）对人工胃液、人工肠液有很好耐受性,90 ℃水浴15 min存活率为97%,能够产生大量有机酸,有利于提高动物机体的抗病能力及改善其生理性能,但对抗生素有一定的敏感性,不能配伍使用。结论 所筛选的芽胞杆菌能够替代粪肠球菌用于生产,为养殖业的微生态产品提高稳定性提供参考。     

短短芽胞杆菌功能基因的研究及其应用

短短芽胞杆菌分布广泛,并且在不同生长阶段,菌落形态也有所不同。目前已经完成2株短短芽胞杆菌的全基因组测序,但只对短短芽胞杆菌部分基因的功能进行了研究,如编码二硫化物氧化还原酶的基因bdb、α-乙酰乳酸脱羧酶的基因aldB、耐碱性木聚糖酶xylB基因和细胞壁的合成基因等,特别是具有抗菌活性的短杆菌酪肽的合成过程及所需酶的基因均有研究。短短芽胞杆菌在生物防治、作为分泌表达外源蛋白的宿主及环境治理等领域有广泛应用前景。     

一株耐高温产纤维素酶芽胞杆菌的筛选鉴定及其液体发酵条件优化

以获得耐高温纤维素酶菌株为目的,以育苗基质中农业生物质废弃物为原料,通过在发酵高温期(≥50 ℃)取样进行菌种筛选,结合菌株形态特征、生理生化指标及16S rDNA进化树分析结果,菌株E鉴定为枯草芽胞杆菌（Bacillus subtilis）。使用优化后的培养基,通过单因子试验方法对产酶条件进行优化,确定菌株E的发酵最优条件为培养温度50 ℃、时间48 h、初始pH值6.0、装液量100 mL、接种量2%～5%（体积分数）,在该条件下发酵液OD值及酶活性达到最高。研究结果为生产生物活性育苗基质及农业废弃物资源化利用等研究提供参考。     

1株产多糖芽胞杆菌的分子鉴定和诱变选育

以中国农业科学院北京畜牧兽医研究所鸡舍附近土壤为材料,采用稀释平板法对其中的菌株进行分离与纯化培养,并对其进行形态学鉴定和粗多糖提取量的检测,同时对分离得到的菌株进行紫外线和亚硝基胍的诱变。从土壤中分离得到1株产多糖的芽胞杆菌(编号P-30),结合形态学鉴定、16S rRNA序列分析和系统发育树分析结果,确定该菌株为短短芽胞杆菌(Bacillus brevis)。其16S rRNA GenBank登录号为HM185814。经过诱变选育后,获得3株(N-05、N-11、U-01)多糖产量为P-30的1.44、1.44和1.29倍的诱变菌株,具有良好的开发前景。     

需氧芽胞杆菌芽胞核心组分的研究现状

芽胞核心作为芽胞的原生质体,实际上是处于休眠状态的细胞,其化学组化比较复杂,核酸,蛋白质,水,无机离子以及有机小分子共同构成芽胞核心特有的“内环境”各种化学组分的含量及存在的形式均与芽胞工能特性尤其抗性密切相关,对它们的深入研究有助于进一步揭示芽胞抗生的有关机制,本文综述对需氧芽胞杆菌核心组分研究。     

外源木聚糖酶在枯草芽胞杆菌中信号肽筛选

[目的]本试验旨在筛选引导表达外源木聚糖酶基因高效分泌的信号肽,为枯草芽胞杆菌木聚糖酶高效分泌表达系统提供元件.[方法]构建信号肽筛选载体,载体是以含壮观霉素抗性基因的大肠-枯草穿梭载体为基本骨架,目标蛋白为耐碱性木聚糖酶,可在麦芽糖启动子Pglv诱导下表达.从枯草芽胞杆菌A1747基因组中扩增获得24个Sec途径信号肽,并将其全部链接到至筛选载体上,并在枯草芽胞杆菌WB700中实现表达分泌.重组菌在3%麦芽糖诱导下培养24h后用DNS法测定上清酶活.[结果]成功构建信号肽筛选载体pGPSX及24个表达载体,实现木聚糖酶表达分泌.且不同信号肽对于引导外源木聚糖酶分泌能力不同,其中YnfF信号肽引导分泌目标蛋白效率最高,上清酶活为37.2IU/mL.[结论]试验证明在枯草杆菌中对外源蛋白进行信号肽筛选是提高其分泌的有效途径,并获得了针对木聚糖酶高效分泌信号肽YnfF.     

枯草芽胞杆菌降解毒死蜱特性研究

研究生物量、pH、毒死蜱浓度和温度对枯草芽胞杆菌3374菌株(编号为GU086422)在水溶液中降解毒死蜱特性,考察该菌株对白菜上毒死蜱残留的降解特性。结果表明,在毒死蜱质量浓度为240 mg/L、pH7.0、温度30℃的适宜条件下,枯草芽胞杆菌3374菌株对毒死蜱的降解率达到92.48%。该菌株能够有效提高白菜叶面上毒死蜱残留的降解速度,表明其在白菜上具有有效降解毒死蜱的能力,在无公害农产品生产中具有广阔的应用潜力。     

鸡源益生芽胞杆菌的筛选

根据菌体对低pH和高胆盐的耐受性、产酶特性和对病原菌的抑菌效果,对家鸡肠道中的芽胞杆菌进行了筛选。结果表明,有4株芽胞杆菌(A2、C5、C19和D8)能抑制金黄色葡萄球菌(Staphylococcus aureus)的生长。这4株菌在pH 3.0和高胆盐条件下的存活率都达到60%以上,产淀粉酶和蛋白酶的能力也较好,表明这些菌株具有作为益生菌的开发潜力。经形态学和生理生化反应鉴定,初步确定A2和D8为地衣芽胞杆菌(Bacillus licheniform is),C5和C19为蜡样芽胞杆菌(Bacillus cereus)。     

一株凝结芽胞杆菌的筛选及对肉鸡生产性能的影响

目的分离自然界中可安全应用于畜禽的凝结芽胞杆菌,提高肉鸡的饲料消化吸收、降低料肉比,改善生产性能。方法在山上、海边及樱桃树下的土壤中分离凝结芽胞杆菌,通过生理生化、16S rRNA鉴定研究菌株的生物学特性,并考察其安全性;最终应用于促进饲料消化吸收、保护肠道健康、提高生产性能。肉鸡饲养至第31天时开始添加凝结芽胞杆菌10 d,分为实验组(1、2、3组)和对照组,考察生产性能指标确定其功能。结果凝结芽胞杆菌J-1产酸溶钙圈高于其他2株,为革兰阳性菌。实验表明在同样的养殖条件下,实验组鸡的粪便干燥、成型、无酱黄色出现;实验组鸡苗的前期7日龄时体质量低于对照组,肉鸡的成活率分别高于对照组0.9%、0.7%、1.2%,料肉比分别低于对照组0.066、0.080、0.050,出栏均重分别优于对照组0.144 kg、0.129 kg、0.079 kg。结论筛选出1株安全、产酸且应用肉鸡实际效果优良的凝结芽胞杆菌,可降低肉鸡料肉比,提高肉鸡的出栏均重、成活率、饲料利用率,并减少肉鸡养殖后期抗生素的使用。     

Isolation, purification and properties of new restriction endonucleases from Bacillus badius and Bacillus lentus

We tentatively named two enzymes as BbaI and BleI, which were isolated and purified from Gram-positive mesophilic bacteria Bacillus badius 1458 and Bacillus lentus 1689 respectively, by ammonium sulphate precipitation, phosphocellulose and heparin-sepharose column chromatography. SDS-PAGE protein profiles for BbaI and BleI showed denatured molecular weights of 52 and 48 kDa, respectively. BbaI hydrolyzed pUC18 DNA into 1900 and 700 bp, pBR322 DNA into two fragments of 2800 and 1500 bp and Φ×174 DNA into 3800 and 1600 bp. BleI hydrolyzed pUC18 DNA into 1800 and 800 bp, pBR322 DNA into two fragments of 2700 and 1600 bp and Φ×174 DNA into 3700 and 1700 bp. The effects of temperature, ionic strength, pH and Mg²⁺ ion concentrations were studied to demonstrate some biochemical properties of BbaI and BleI. Maximum activities of these enzymes were observed at 37 °C (pH 8.0) with 100 mM NaCl and 10 mM Mg²⁺ concentrations.     

Application of cross-linked enzyme aggregates of Bacillus badius penicillin G acylase for the production of 6-aminopenicillanic acid

AIMS: Optimization of 6-aminopenicillanic acid (6-APA) production using cross-linked enzyme aggregates (CLEA) of Bacillus badius penicillin G acylase (PAC). METHODS AND RESULTS: CLEA-PAC was prepared using purified/partially purified PAC with phenylacetic acid as active-site blocking agent and glutaraldehyde as cross-linker. Conversion of penicillin G to 6-APA by CLEA-PAC was optimized using response surface methodology (RSM) (central composite rotatable design) consisting of a three-factor-two-level pattern with 20 experimental runs. CONCLUSION: Nearly, 80% of immobilization yield was obtained when partially purified enzyme was used for the preparation of CLEA-PAC. Quantitative conversion of penicillin G to 6-APA was observed within 60 min and the CLEA-PAC was reusable for 20 repeated cycles with 100% retention of enzyme activity. SIGNIFICANCE AND IMPACT OF THE STUDY: The faster conversion of penicillin G to 6-APA by CLEA-PAC and efficient reusability holds a strong potential for the industrial application.     

两株对虾育苗用益生芽孢杆菌的筛选和鉴定

从土壤和虾池中分离到22株具有不同特征的芽孢杆菌,分别将各菌株对数期约5×10^8个细胞添加到500mL预先加有凡纳滨对虾（Litopenaeus vannamei）无节Ⅲ期幼体的水体中,各菌株在初始水体中含量均约为106个细胞/mL,根据各菌株对无节Ⅲ期到蚤状Ⅱ期幼体变态成活率的影响,从中初步筛选出10株对幼体变态成活有极显著（p〈0.01）效果的芽孢杆菌。进一步又从初筛到的10个菌株中复筛到2株对幼体变态成活最为明显的芽孢杆菌,菌株zou4和zou8。两菌株与复筛的其他8株芽孢杆菌相比,均显著（p〈0.05）促进幼体变态存活率。根据形态和生理生化特征,菌株zou4和zou8分别初步鉴定为坚强芽孢杆菌（Bacillus firmus）和蜡状芽孢杆菌（B.cereus）。为进一步确定zou4和zou8的分类地位,测定了两菌株的16S rRNA基因序列,分析了相关细菌16S rDNA序列的同源性,构建了系统发育树。结果表明菌株zou4和zou8分别与坚强芽孢杆菌和蜡状芽孢杆菌的同源性最高,相似值均为99%以上。系统发育树上zou4和zou8也分别与坚强芽孢杆菌和蜡状芽孢杆菌聚为一类。综合上述结果,芽孢杆菌zou4和zou8菌株分别被鉴定为坚强芽孢杆菌和蜡状芽孢杆菌。     

木屑固定除油菌处理含油废水的研究

利用木屑作为载体的固定化微生物QK-1对含油废水进行处理,原油去除率大大高于单纯投加菌液或菌液和木屑的混合物。原油浓度为10.0~30.0g·L^-1时,固定化除油菌QK-1的原油去除率为75.5~94.3%,最佳投加量为干重15.0g·L^-1。研究表明,除油菌的固定化培养基对其原油去除率起了决定性的影响,其中碳源和氮源对其影响较大,pH则不太明显。固定化培养基的优化方案为:蔗糖10.0g·L^-1,牛肉膏6.0g·L^-1,酵母粉1.5g·L^-1,pH8.0。     

Bacillus cereus CC-1的亚碲酸盐还原特性及产物表征

【背景】含Te(IV)的工业废水对于生物体具有潜在的毒性作用,可将Te(IV)还原为Te⁰的微生物过程具有重要的研究价值。【目的】探索亚硒酸盐还原菌Bacillus cereus CC-1对Te(IV)的还原能力、还原酶位点以及还原产物的特性。【方法】利用前期筛选的亚硒酸盐还原菌Bacillus cereus CC-1还原Te(IV),根据48h内还原率大小确定最适Te(IV)浓度及pH;考察不同阴阳离子对Te(IV)还原率的影响与Te(IV)还原酶位点;利用表征分析确定还原产物的组成、结晶性与形貌。【结果】菌株CC-1能够将Te(IV)还原,Te(IV)初始浓度为0.5 mmol/L,体系pH为7.0时还原率最高。体系中外加阴阳离子对Te(IV)的还原有一定影响,其中磷酸根、硫酸根、醋酸根、钼酸盐对Te(IV)的去除无明显影响;低浓度的硝酸根抑制Te(IV)的去除,随着硝酸根浓度增加,其对Te(IV)的去除的抑制作用减弱;铅离子和铋离子对Te(IV)的还原有抑制作用;铜离子能够提高Te(IV)的去除率。在胞外、细胞膜组分以及细胞内均检测到Te(IV)还原酶的活性...     

Patterns of size variation and correlation in the dentition of the red colobus monkey (Colobus badius)

There have been numerous studies on variability and correlation in dental crown size, but the significance of the resulting patterns remains unclear. Regions of low variation and high correlation have been hypothesized to represent the poles of Butler's morphological fields, to be related to absolute tooth size, or to be related to morphological complexity of the teeth and functional efficiency. Variation and correlation of tooth lengths and breadths were investigated in 138 red colobus monkeys to further assess the relations among size associations, crown morphology, and absolute tooth size. In the maxilla and mandible, the postcanine teeth are the most highly correlated and least variable, followed by the incisors, then the canines. There are also lower correlations between premolars and molars than within either group. While there appears to be a relation between degree of morphological differentiation and levels of correlation and variation, there are no notable differences in the correlation of opponents along the dental arcade, which is the most important functional consideration. This suggests that different levels of correlation and variation within upper or lower teeth are “artifacts” of tooth dimensions that contribute to different geometric designs in different tooth groups as the germs develop. This morphological effect is coupled with the influence of integration fields, indicated by higher variability and lower correlations of the third molar, the largest or most molarized tooth. It is concluded that there are wide functional tolerances in occlusion with respect to the gross dimensions of dental crowns and their interrelationships.     

高效降解蛋白枯草芽孢杆菌的筛选及促建鲤生长的研究

【目的】从建鲤肠道分离并优选出了一株对蛋白具有强效降解力的菌株,探究其临床生产效果。【方法】使用牛奶平板进行筛选,经常规细菌学鉴定和16S rDNA序列分析确定A7菌株为枯草芽孢杆菌,通过临床饲喂试验探究其对建鲤促生长作用。【结果】A7菌株在牛奶平板上的水解圈直径可达27.5 mm,其最佳固体发酵条件为温度28°C、接种量5%(1.2×109 CFU/mL)、料水比1.0:1.2和发酵时间72 h。临床饲喂试验结果表明,饵料中添加0.5%、1.0%和1.5%的A7株菌粉均能促建鲤生长。其中,添加量为1.0%的试验组,鱼体增重率和蛋白利用率最高,饵料系数最低,与产品对照组和空白对照组相比,均达到了显著性差异(P0.05)。此外,随A7株菌粉添菌量的增加,各试验组肝胰脏和肠道的蛋白酶及淀粉酶活力出现先增大后减小趋势,与产品对照组和空白对照组相比,添加1.0%的试验组增幅最大(P0.05)。研究发现,试验组鱼肌肉中粗蛋白和粗脂肪含量较空白对照组也有明显的增减趋势(P0.05)。【结论】饵料中添加A7株菌粉,可有效促进鱼的生长,降低饵料系数,提高肝胰脏和肠道的蛋白酶及淀粉酶活力,并提高鱼肌肉中的蛋白含量和降低脂肪含量。     

一株来自蚯蚓的产纤溶酶蜡状芽孢杆菌Bacillus cereus的筛选及鉴定

对来自4个不同省份的5条蚯蚓的肠道及体表细菌进行分离,共获得122株细菌。通过脱脂奶粉平板法初筛,纤维蛋白平板法复筛,以透明圈为筛选标记,共筛选出产纤溶酶菌株12株,其中菌株SC-3-W-3的纤溶酶活力较高,达到了538.64 U/mL(相当于尿激酶的活力单位)。通过对其形态、培养、生理生化特征进行研究,发现其与蜡状芽孢杆菌Bacillus cereus Frankland的特征很相符。进一步对SC-3-W-3的16S rDNA序列及系统发育分析表明,该菌株与蜡状芽孢杆菌的同源性高达100%。综合生理生化及16S rDNA序列比对结果,将SC-3-W-3菌株鉴定为蜡状芽孢杆菌。     

Taxonomic insights into the phylogeny of Bacillus badius and proposal for its reclassification to the genus Pseudobacillus as Pseudobacillus badius comb. nov. and reclassification of Bacillus wudalianchiensis Liu et al., 2017 as Pseudobacillus wudalianchiensis comb. nov.

The species Bacillus badius is one of the oldest members of the genus Bacillus isolated from faeces of children and was classified based on its ability to form endospores [8]. In 16S rRNA gene sequence and phylogenetic analysis, Bacillus badius DSM 23^T shared low similarity (93.0%) and distant relationship with B. subtilis, the type species of the genus Bacillus indicating that it does not belong to this genus. Additional strains of the species, B. badius DSM 5610, DSM 30822 and B. encimensis SGD-V-25 (which has been recently reclassified as a member of this species) were included in the study to consider intraspecies diversity. Detailed molecular phylogenetic and comparative genome analysis clearly showed that the strains of B. badius were consistently retrieved outside the cluster of Bacillus sensu stricto and also distantly related to the genera Domibacillus and Quasibacillus. Further, the data from biochemical reactions (inability to ferment most carbohydrates), polar lipids profile (presence of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an aminophosphoglycolipid) and fatty acids supported the molecular analysis. Thus the four B. badius strains; DSM 23^T, DSM 5610, DSM 30822 and SGD-V-25 displayed sufficient demarcating phenotypic characteristics that warrant their classification as members of a novel genus and single species, for which the name Pseudobacillus badius gen. nov. comb. nov. is proposed with Pseudobacillus badius DSM 23^T (= ATCC 14574^T) as the type strain. Additionally, based on our findings from phenotypic, chemotaxonomic and genotypic parameters, Bacillus wudalianchiensis DSM 100757^T was reclassified as Pseudobacillus wudalianchiensis comb. nov.     

大熊猫肠道芽孢杆菌的分离鉴定及部分生物学特性

【目的】分析大熊猫肠道中芽孢杆菌的种类、纤维素分解能力、抗微生物作用和常用抗生素药物敏感性。【方法】利用芽孢耐高温特性分离菌株,基于16S r RNA基因序列构建系统发育树,通过测量芽孢杆菌在刚果红纤维素培养基上的分解圈分析其纤维素分解能力,采用牛津杯法测定芽孢杆菌的抑菌能力,结合软件分析抑菌能力和进化树之间的关系,通过PCR调查芽孢杆菌的抗菌肽分布规律,最后通过药敏试验检测芽孢杆菌是否对常用抗生素敏感。【结果】共分离得到21株芽孢杆菌;进化树显示,这些芽孢杆菌分为6个类别(Category);羧甲基纤维素钠水解结果显示,所有菌株均能分解纤维素;大部分芽孢杆菌菌株对3种肠道病原菌有较强的抑制能力,聚类分析表明,菌株的抗菌能力与基于16S r RNA基因的分类有一定的关联性;66.67%(14/21)的菌株中可以检测到2个或3个抗菌肽基因;药敏试验结果显示,菌株整体药物耐受率低,仅为7.54%(19/264),但仍有少数菌株对抗生素耐受。【结论】分离菌株种类丰富,分布平均,且均具有纤维素分解能力。21株菌株都含有抗菌肽基因,代谢产物对3种肠道病原菌具有明显抑制作用。常用抗生素耐受性低,对规范临床用药具有指导性。