Morphological and ultrastructural characteristics of symbiotic bacteria colonizing the surface of the helminth Triaenophorus nodulosus and the intestine of pike Esox lucius

The microflora inhabiting the intestinal mucosa of the pike and the tegument surface of the intestinal parasite Triaenophorus nodulosus is investigated. By means of electron microscopy, the ultrastructural features of bacteria and pattern of their interaction with the colonized surfaces are estimated. Specific distribution of microorganisms belonging to different morphotypes and subdivided into subpopulations on the colonized surfaces is found. Predominance of gram-negative bacteria in all studied microbiocenoses and abundance of nanobacteria in the “superficial” subpopulations are observed. The bacteria of “a deep population” associated with the basal parts of microtrichiae and microvilli are described. It is concluded that the helminthes, the fish parasites possess the normal microflora characterized by specific composition, by ultrastructural features of cells, and by patterns of interaction with the helminth surface. The obtained data characterize the mechanisms of symbiotic interaction of prokaryotes and eukaryotes in the system parasite-host-symbiotic microflora.     

Indigenous microflora associated with the tegument of Triaenophorus nodulosus (Cestoda) and the intestine of its pike host

Investigations of the indigenous microflora associated with the mucous intestines of fish and its cestode parasites have been for the first time carried out using the methods of transmission and scanning electron microscopy. New data on the bacterial biodiversity in the cestode and its fish host are obtained. Nanobacteria and spirochaetes are for the first time revealed in a fish host together with the previously known bacteria forming the intestinal microflora of fish. Spirochaetes were shown to be associated with the intestines of a pike host only, while nanobacteria cover abundantly the surface of the apical parts of the intestinal microvilli and the apical parts of the microtriches in the cestode tegument. The similarity of the bacterial floras associated with the apical surface of the parasite tegument and the intestine of the host should be noted. At the same time, deeper bacterial communities represented by obligate symbionts are specific. Thus, there is a normal indigenous microflora in cestodes, associated with the tegumental surface. This symbiotic microflora has specific morphological features and provides the balance of relations in the parasite-host system.     

The symbiotic microflora associated with the tegument of proteocephalidean cestodes and the intestines of their fish hosts

The indigenous symbiotic microflora associated with the tegument of proteocephalidean cestodes and the intestines of their fish hosts has been investigated in morphological and ecological aspects. The indigenous microflora associated with the cestode tegument consists of the nannobacteria population, which was present obligatorily on the surface of tegument, and the "deep microflora". The deep microflora associates with some few species of parasites only. Each individual host-parasite micro-biocenosis includes specific indigenous symbiotic microorganisms, with the differing microfloras of host intestine and parasite. Physiology, biochemistry and/or diet of hosts apparently influence on the symbiotic microflora's structure of parasites. The least bacteria abundance and diversity of their morphotypes were observed in the parasites from baby fishes. The diversity and abundance of bacteria were increased with the fish host ageing and the formation of the definitive structure of its intestine. It is an evidence of the gradual invading of the intestinal parasites (cestodes) tegument by bacterial cells. The invading is realized on the base of the microflora that was present in the food of fish host. The symbiotic microflora has specific morphological features, can regulate the homeostasis of the cestodes and fish hosts and also can maintain equilibrium of alimentary and immune interrelations in the host-parasite system.     

Hydrolytic activity of symbiotic microflora enzymes in pike (<Emphasis Type="Italic">Esox lucius</Emphasis> L.) intestines

This study has revealed the existence of microflora which is, to different degrees, associated with the intestinal mucosa of pike. A total of 82 bacterial strains have been isolated. These microorganisms produce enzymes that hydrolyze the major food substrates (proteins and carbohydrates). These enzymes are produced by the pool of various microorganisms living in the intestines, as well as by separate strains isolated in pure cultures. These strains produce enzymes with different levels of activity. Most of the isolated strains (68%) produce proteases. The calculated values of the C/P factor (the ratio of carbohydrase to protease activity) indirectly testify to the autochthonous nature of the microflora associated with the intestinal mucosa of pike. Presumably, the contribution that the microflora enzymes make to the enzymatic activity of the pike intestine is substantial, but it is difficult to estimate now.     

白蚁肠道微生物研究方法概述

白蚁是木质纤维素的主要降解者,在森林生态系统碳氮循环过程中发挥着重要作用。白蚁肠道共生微生物主要包括原生生物、细菌、古菌和真菌。在白蚁对木质纤维素进行降解、发酵,从而产生乙酸、氢气和甲烷以及对氮的固定过程中,白蚁肠道共生微生物起着重要的作用。本文对白蚁肠道微生物的研究方法进行总结,概述了各种方法的优缺点,同时对肠道微生物的研究进展进行了总结,以期为白蚁肠道微生物的进一步研究和利用提供参考。     

Taxonomic characteristics and physiological properties of microorganisms from the gut of pike (<Emphasis Type="Italic">Esox lucius</Emphasis>)

The taxonomic composition and distribution of microorganisms differing in the degree of association with the intestinal mucosa of the pike (Esox lucius) has been studied. Microorgansism of the families Enterobacteriaceae, Aeromonadaceae, and Vibrionaceae dominate in the gut microflora. Numerically prevailing bacterial species are characterized by high proteolytic and amylolytic enzyme activities as well as by high persistence accounted for by antilysozyme and antihistone activities. The results of this study show that Hafnia alvei, Yersinia ruckeri, Vibrio vulnificus, V. furnissii, Aeromonas salmonicida, and Shewanella putrefaciens may be regarded as normal components of the pike gut microflora.     

A Biochemical Approach for Assessment of the Diversity of Symbiotic Dinoflagellates

The fatty acid composition of polar lipids and triacetylglycerols was determined in different morphophysiological types of symbiotic dinoflagellates isolated from the hydrocoral Millepora intricata and the scleractinian corals Pocillopora damicornis, Seriatopora caliendrum, Seriatopora hystrix, and Stylophora pistillata. The distribution of fatty acids differed fairly markedly among the investigated morphophysiological types of symbiotic dinoflagellates. The differences were found both in polar lipids, which are the structural components of the cell membranes, and storage lipids—triacetylglycerols. It is shown that fatty acids are useful chemotaxonomic markers for symbiotic dinoflagellates. It is assumed that the biochemical differences among the morphophysiological types of symbiotic dinoflagellates can reflect the genetic diversity of these types.     

Effect of different holding regimens on the intestinal microflora of herring (Clupea harengus) larvae.

The aerobic intestinal microflora of 2-week-old herring (Clupea harengus) larvae was characterized by using conventional microbiological methods and electron microscopy. Larvae were hatched and kept in filtered seawater or in seawater with penicillin and streptomycin. The gastrointestinal tract of herring larvae is essentially a straight tube divided into two compartments. Light microscopy revealed bacteria present in a progressively increasing amount throughout the length of the gastrointestinal tract from esophagus to anus. The posterior region of the intestinal lumen appeared completely occluded with bacteria. The intestinal microflora consisted mainly of members of the genera Pseudomonas and Alteromonas in the larvae incubated in filtered seawater, whereas Flavobacterium spp. dominated in larvae exposed to antibiotics. The intestinal microflora of untreated fish larvae was sensitive to all tested antibiotics, whereas multiple resistance was found in the intestinal microflora of the group given antibiotics. Thus, a dramatic change in the microflora resulted from incubation with antibiotics. Nonpigmented yeasts were detected in both larval groups. Ciliated epithelial cells were observed in the midgut, probably propeling bacteria towards the hindgut, where endocytosis of bacteria has been demonstrated. These findings suggest that transport and sequestering mechanisms resembling those of invertebrates may be found in the gut of fish larvae. The possible significance for larval health and nutrition is discussed.     

Intestinal microflora and the interaction with immunocompetent cells

The intestinal mucosal surface is colonised by the comensal microflora that attains very high numbers of bacterial cells in the distal intestine, more specifically in the colon. At the same time these extensive areas are the interface with the external environment, through which most pathogens initiate infectious processes in mammals. Intestinal mechanisms of defense need to discriminate accurately between comensal, symbiotic microflora, and exogenous pathogens. Today we do not fully understand the essence of the mechanism of discrimination but, probably, innate as well as adaptive immune responses participate in this process. We have explored , in in vitro models, the capacity of mucosal immunocompetent cells to discriminate amongst signals delivered by different types of bacteria. We have found at least two different patterns of innate response to gram-negative and gram-positive bacteria, and within this last group big differences are observed between species. We have only wo rked with non-pathogenic bacteria in what may represent the modulation of the physiological host status. The understanding of these modulatory functions could render a unique possibility for the use of food-borne bacteria to prevent or correct intestinal problems associated with food allergy, inflammatory bowel disease, and autoimmunity.     

Effect of different holding regimens on the intestinal microflora of herring (Clupea harengus) larvae.

The aerobic intestinal microflora of 2-week-old herring (Clupea harengus) larvae was characterized by using conventional microbiological methods and electron microscopy. Larvae were hatched and kept in filtered seawater or in seawater with penicillin and streptomycin. The gastrointestinal tract of herring larvae is essentially a straight tube divided into two compartments. Light microscopy revealed bacteria present in a progressively increasing amount throughout the length of the gastrointestinal tract from esophagus to anus. The posterior region of the intestinal lumen appeared completely occluded with bacteria. The intestinal microflora consisted mainly of members of the genera Pseudomonas and Alteromonas in the larvae incubated in filtered seawater, whereas Flavobacterium spp. dominated in larvae exposed to antibiotics. The intestinal microflora of untreated fish larvae was sensitive to all tested antibiotics, whereas multiple resistance was found in the intestinal microflora of the group given antibiotics. Thus, a dramatic change in the microflora resulted from incubation with antibiotics. Nonpigmented yeasts were detected in both larval groups. Ciliated epithelial cells were observed in the midgut, probably propeling bacteria towards the hindgut, where endocytosis of bacteria has been demonstrated. These findings suggest that transport and sequestering mechanisms resembling those of invertebrates may be found in the gut of fish larvae. The possible significance for larval health and nutrition is discussed.     

肠道微生物菌群分型的研究进展

人体肠道内存在着处于动态平衡中的复杂微生物群体,包含1000多种细菌和古生菌等共生微生物。它们广泛参与人体的营养、代谢和免疫等生理过程,是影响健康最重要的因素之一。同一个体不同胃肠道部位的微生物群落组成显著不同,而在不同个体的肠道微生物群落组成也存在很大差异。肠道微生物群落结构受到饮食习惯、药物干预以及生活环境等因素影响,形成了不同个体间菌群组成的差异。通过菌群测序分析和群体分型,可以将不同个体的肠道微生物群落组成分为拟杆菌、普氏菌和瘤胃球菌三种肠型。确定肠道微生物群落结构的分型,将复杂的肠道微生物系统模式化,有利于对大样本肠道微生物菌群进行分析,更好地指导相关疾病的诊断和治疗。本文综述了肠道微生物的分型和相关影响因素的进展。     

Persistent properties of protozoa-associated bacteria

The species structure and persistent properties (antilysozyme and antihistone activity) of bacteria forming associations with protozoa is revealed. Among them, 68.9% of the isolates were enterobacteria, the remaining organisms belonged to the families Aeromonas, Alcaligenes, Pseudomonas, Vibrio, etc. Within the family Enterobacteriaceae bacteria of the Escherichia group prevailed. 50.4% of the isolates were found to have antilysozyme activity and 97%--antihistone activity. The level of persistent properties in the representatives of allochthonous microflora was higher than that in the representatives of autochthonous microflora. In addition to antilysozyme activity antihistone activity was noted in protozoa-associated bacteria, which could be of importance for the formation of symbiotic links in natural associations. These data may be used in sanitary and hygienic practice for microecological monitoring of the environment.     

Effects of ceftriaxone‐induced intestinal dysbacteriosis on dendritic cells of small intestine in mice

Intestinal microflora plays a pivotal role in the development of the innate immune system and is essential in shaping adaptive immunity. Dysbacteriosis of intestinal microflora induces altered immune responses and results in disease susceptibility. Dendritic cells (DCs), the professional antigen‐presenting cells, have gained increasing attention because they connect innate and adaptive immunity. They generate both immunity in response to stimulation by pathogenic bacteria and immune tolerance in the presence of commensal bacteria. However, few studies have examined the effects of intestinal dysbacteriosis on DCs. In this study, changes of DCs in the small intestine of mice under the condition of dysbacteriosis induced by ceftriaxone sodium were investigated. It was found that intragastric administration of ceftriaxone sodium caused severe dysteriosis in mice. Compared with controls, numbers of DCs in mice with dysbacteriosis increased significantly (P = 0.0001). However, the maturity and antigen‐presenting ability of DCs were greatly reduced. In addition, there was a significant difference in secretion of IL‐10 and IL‐12 between DCs from mice with dysbacteriosis and controls. To conclude, ceftriaxone‐induced intestinal dysbacteriosis strongly affected the numbers and functions of DCs. The present data suggest that intestinal microflora plays an important role in inducing and maintaining the functions of DCs and thus is essential for the connection between innate and adaptive immune responses.     

Colonization of the stratified squamous epithelium of the nonsecreting area of horse stomach by lactobacilli

Selective adhesion to only certain epithelia is particularly common among the bacterial members of the indigenous microflora of mammals. We have found that the stratified squamous epithelium of the nonsecreting area of horse stomach is colonized by gram-positive rods. The microscopic features of a dense layer of these bacteria on the epithelium were found to be similar to those reported in mice, rats, and swine. Adhering microorganisms were isolated and identified as Lactobacillus salivarius, L. crispatus, L. reuteri, and L. agilis by DNA-DNA hybridization and 16S rRNA gene sequencing techniques. These lactobacilli associated with the horse, except for L. reuteri, were found to adhere to horse epithelial cells in vitro but not to those of rats. A symbiotic relationship of these lactobacilli with the horse is suggested.     

Diversity of Nitrogen Fixation Genes in the Symbiotic Intestinal Microflora of the Termite Reticulitermes speratus

The diversity of nitrogen-fixing organisms in the symbiotic intestinal microflora of a lower termite, Reticulitermes speratus, was investigated without culturing the resident microorganisms. Fragments of the nifH gene, which encodes the dinitrogenase reductase, were directly amplified from the DNA of the mixed microbial population in the termite gut and were clonally isolated. The phylogenetic analysis of the nifH product amino acid sequences showed that there was a remarkable diversity of nitrogenase genes in the termite gut. A large number of the termite nifH sequences were most closely related to those of a firmicute, Clostridium pasteurianum, with a few being most closely related to either the (gamma) subclass of the proteobacteria or a sequence of Desulfovibrio gigas. Some of the others were distantly related to those of the bacteria and were seemingly derived from the domain Archaea. The phylogenetic positions of these nifH sequences corresponded to those of genera found during a previous determination of rRNA-based phylogeny of the termite intestinal microbial community, of which a majority consisted of new, yet-uncultivated species. The results revealed that we have little knowledge of the organisms responsible for nitrogen fixation in termites.     

Intestinal microbial patterns of the common marmoset and rhesus macaque

The intestinal microflora of common marmosets and rhesus monkeys were compared by enumerating bacteria from the small and large intestines. Rhesus monkeys had a consistent microflora pattern manifest by higher concentrations of total and Gram-negative aerobic and facultatively anaerobic bacteria, as well as aerobic and anaerobic Lactobacilli, in the large intestine as compared to the small intestine. In contrast, the marmoset microflora were considerably more variable. Approximately two-thirds of the marmosets (designated group A) had an overall profile that resembled the rhesus monkeys, but they had significantly higher concentrations of Gram-negative microflora in their large intestines than the rhesus monkeys. The remaining marmosets (group B) had higher concentrations of bacteria in the small intestine as compared to the large intestine, with the large intestinal concentrations being significantly lower than in the rhesus monkeys and group A marmosets. Moreover, the marmosets did not have detectable levels of aerobic Lactobacilli, and anaerobic Lactobacilli concentrations were significantly lower than in the rhesus macaques. Although it is unknown why microflora differ across species, it is likely that evolutionary adaptations in anatomy and functioning of the gastrointestinal tract influence the concentration and types of bacteria residing as the normal intestinal microflora.     

Proteolytic Activity of Microflora Associated with the Digestive-Transport Surfaces of Intestine of the Burbot Lota lota and of Eubothrium rugosum Parasitized in It

The presence of symbiotic microflora associated with the digestive-transport surfaces of the burbot intestine and of Eubothrium rugosum (Cestoda, Pseudophyllidea) parasitizing in it has been shown. The bacteria absorb amino acids from the cultivation medium or release proteolytic enzymes into the medium, depending on its composition. The studied microorganisms act either as competitors of the parasite and host for nutritive substrates or as suppliers of proteolytic enzymes that can be subsequently used by the parasite and host in the digestive processes. The amino acid absorption and release of proteolytic enzymes by the bacteria do not depend on the medium pH. The microorganisms that are more closely associated with the studied surfaces seem to make a greater contribution to digestive processes both of the parasite and of the host, as bacteria present in the intestinal contents are removed faster from the digestive tract.     

Diversity of probiotic adhesion genes in the gastrointestinal tract of goats

Gastrointestinal (GI) microflora is an important system in the host, as it has both pathogenic and probiotic bacteria. Most of the studies were focused on the human gut microflora and the available information on the intestinal microflora of goats was limited. This urged the need to inspect the impacts of the goat's gut microflora. Metagenomic investigation of probiotic bacteria in the GI tract of goat is one of the challenging streams because of the less available data of the uncultivable bacteria. In our report, comparative analysis of metagenomic and enrichment samples of goat intestinal content was done and this approach will be helpful in analyzing the identification of uncultivable and cultivable probiotic bacteria. This study mainly focused on three key probiotic adhesion genes, such as EF-Tu, mapA, and mub. The GI of four different goats were investigated for these genes. The data from this study showed that there is a wide diversity of these genes among goat intestinal samples.     

甲维盐对斜纹夜蛾幼虫肠道细菌的影响

【目的】斜纹夜蛾幼虫属杂食性、高食量的害虫,通过分子生物学手段对经甲维盐处理后的斜纹夜蛾幼虫肠道微生物进行比对,研究肠道共生菌群受毒剂刺激后的代谢变化,探讨菌株的自身代谢与甲维盐的作用受体的相关性。【方法】基于Illumina MiSeq技术测序平台,对取食甲维盐和未取食甲维盐的斜纹夜蛾幼虫中肠细菌的16S rRNA可变区进行高通量测序,分析对比细菌群落结构多样性。【结果】肠杆菌属、根瘤菌属在斜纹夜蛾的肠道中占优势地位,经过甲维盐处理后两者的丰度大幅下降。沙雷氏菌属和黄单胞杆菌属在处理后减少到几乎为零,相反,原先不占据优势的棒状杆菌属和甲醇杆菌属,处理后丰度明显上升。【结论】甲维盐处理后的优势菌群以及丰富度均发生变化,表明斜纹夜蛾的肠道菌群结构可能与甲维盐毒理机制有关。     

肠道菌群及内毒素在多器官功能不全综合征时的变化

目的　探讨肠道菌群及内毒素在多器官功能不全综合征( MODS)时的变化。方法　取SD大鼠,腹腔注射无菌酵母多糖A制备MODS模型,检测大鼠肠道菌群、外周血和门静脉血中的内毒素以及肠道游离内毒素含量,并进行定量分析。结果　模型组大鼠肠道专性厌氧菌的数量明显减少,革兰阴性杆菌和双歧杆菌的比例倒置,内毒素含量明显增加,与对照组比差异有显著性( P<0 .0 5 )。结论　MODS时肠道细菌微生态发生明显改变,肠道内毒素池与肠道革兰阴性杆菌的变化密切相关