Chromosome numbers and DNA content in Bromeliaceae: additional data and critical review

For the large Neotropical plant family Bromeliaceae, we provide new data on chromosome numbers, cytological features and genome size estimations, and combine them with data available in the literature. Root‐tip chromosome counts for 46 species representing four subfamilies and a literature review of previously published data were carried out. Propidium iodide staining and flow cytometry were used to estimate absolute genome sizes in five subfamilies of Bromeliaceae, sampling 28 species. Most species were diploid with 2n = 50 in Bromelioideae, Puyoideae and Pitcairnioideae, followed by 2n = 48 observed mainly in Tillandsioideae. Individual chromosome sizes varied more than tenfold, with the largest chromosomes observed in Tillandsioideae and the smallest in Bromelioideae. Genome sizes (2C‐values) varied from 0.85 to 2.23 pg, with the largest genomes in Tillandsioideae. Genome evolution in Bromeliaceae relies on two main mechanisms: polyploidy and dysploidy. With the exception of Tillandsioideae, polyploidy is positively correlated with genome size. Dysploidy is suggested as the mechanism responsible for the generation of the derived chromosome numbers, such as 2n = 32/34 or 2n = 48. The occurrence of B chromosomes in the dysploid genus Cryptanthus suggests ongoing speciation processes closely associated with chromosome rearrangements. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 176 , 349–368.     

Chromosomal features and evolution of Bromeliaceae

New cytological information and chromosome counts are presented for 19 taxa of 15 genera of the Bromeliaceae, among them, data for 15 taxa and five genera are reported for the first time. The basic number x = 25 is confirmed and polyploidy seems to be the main evolutionary mechanism in Bromeliaceae. Most of the analyzed species presented 2n = 50. Polyploids have been detected in Deinacanthon urbanianum with 2n = ca.160 and Bromelia laciniosa with 2n = ca.150. In Deuterocohnia lorentziana we observed individuals with two different ploidy levels (2n = 50 and 2n = 100) growing together in the same pot. Ayensua uaipanensis showed the uncommon number 2n = 46. After triple staining with CMA₃/Actinomycin/DAPI one or two CMA⁺/DAPI⁻ bands could be observed in the studied species (Aechmea bromeliifolia, Greigia sphacelata and Ochagavia litoralis). The role of these features in the evolution of the family is discussed, revealing new aspects of the evolution of the Bromeliaceae.     

Chromosome number of <Emphasis Type="Italic">Orthophytum</Emphasis> species (Bromeliaceae)

The genus Orthophytum Beer comprises 53 species, all narrow endemics to south-eastern and north-eastern Brazil. In this study we present meiotic and mitotic chromosome numbers of 12 species of this important genus in Bromeliaceae. For six of these taxa we are reporting the first cytogenetic study. Orthophytum albopictum, O. amoenum and O. burle-marxii presented 2n = 100 chromosomes and O. hatschbachii, O. mucugense, O. vagans, O. supthutii, O. zanonii and O. ophiuroides showed 2n = 50 chromosomes. These results are consistent with the proposed basic number of x = 25 for Bromeliaceae family. In the genus Orthophytum, polyploidy seems to play an important role in chromosome evolution associated with habitat differentiation among diploid and polyploid species.     

CHROMOSOME NUMBERS IN CUPHEA (LYTHRACEAE): NEW COUNTS AND A SUMMARY

The American genus Cuphea with ca. 260 species is extremely diverse with respect to chromosome number. Counts are now available for 78 species and/or varieties, or 29% of the genus. Included in this study are first reports for 15 taxa from Brazil, Cuba, Dominican Republic, Mexico, and Venezuela. Twenty-two different numbers are known for the genus, ranging from n = 6 to n = 54. The most common number in the primary center of species diversity in Brazil is n = 8, which is regarded as the base number of the genus. Two numbers are most common in the secondary center in Mexico, n = 10 and n = 12. Species with n = 14 or higher are considered to be of polyploid origin. Polyploids comprise 46% of the total species counted and appear in 9 of the 11 sections for which chromosome numbers have been reported. Aneuploid species comprise ca. 25% of the genus and are known from 7 of the 11 sections. The two subgenera are not characterized by different chromosome numbers or sequences of numbers. None of the 14 sections are circumscribed by a single chromosome number. Morphological and ecological variability in widespread, weedy species is correlated with differing chromosome numbers in some species whereas in others the chromosome number is stable. Summary of chromosome numbers by taxonomic section is presented. Section Euandra, centered in eastern Brazil, and the largest section of the genus, appears to be chromosomally most diverse. In section Trispermum, characterized by difficult, variable species with intermediate forms, two of the four species studied have polyploid races. Section Heterodon, endemic to Mexico and Central America and comprising most of the annual species of the genus, is best known chromosomally. Chromosome numbers have been counted for 25 of 28 species, and 12 different numbers are reported. The most advanced sections, Melvilla and Diploptychia, with numerous species occurring at higher altitudes, are characterized by high polyploids. Apomictic species occur in sect. Diploptycia. The cytoevolution of Cuphea is complex with frequent polyploid and aneuploid events apparently playing a significant role in speciation in both centers of diversity.     

CYTOGEOGRAPHICAL STUDIES IN THE GENUS ARNICA (COMPOSITAE: SENECIONEAE). I

A total of 134 chromosome counts representing 21 taxa of the genus Arnica are presented. Counts are published here for the first time for A. lonchophylla (n = 38) and A. nevadensis (n = 38). Ten previously unreported counts representing 9 taxa are also presented. The basic chromosome number of the genus is x = 19. With respect to chromosome number, the genus exhibits maximum diversity in the Rocky Mountains of Colorado and Wyoming. Arnica angustifolia, A. cordifolia and A. mollis are recognized as mature polyploid complexes, containing several wide ranging polyploid races and only a few highly restricted or scattered diploid races. Within the genus in general, diploids tend to be restricted to unglaciated areas while polyploids are much wider ranging, particularly in unglaciated areas.     

ISOZYME NUMBER IN SUBTRIBE ONCIDIINAE (ORCHIDACEAE): AN EVALUATION OF POLYPLOIDY

The Oncidiinae has attracted attention because of the variation it exhibits in chromosome number, n = 5–30, which is greater than the range in the rest of the Orchidaceae. The genus Psygmorchis, with n = 5 and 7, has been a particular focus of controversy, and many authors have suggested that 5 and 7 are the base numbers for the subtribe. The other taxa in the subtribe presumably evolved through hybridization and polyploidy. Other workers have found that the lowest counts correlate with derived morphological conditions and have hypothesized that these low numbers result from aneuploid reductions, while higher numbers are associated with ancestral morphologies and are not the result of polyploidy. These two hypotheses were evaluated by determining isozyme numbers for 13 enzymes in species that span the chromosomal range known for the Oncidiinae (n = 5–30). Isozyme number has been shown to be a reliable indicator of polyploidy in angiosperms because polyploids display isozyme multiplicity relative to diploids. This analysis revealed no differences among species in isozyme number for the enzymes examined. Therefore, our data reject the hypothesis that species with higher chromosome numbers are polyploid.     

Chromosome numbers, meiotic behavior, and pollen viability of species of Vriesea and Aechmea genera (Bromeliaceae) native to Rio Grande do Sul, Brazil

Chromosome number, meiotic behavior, and pollen viability were analyzed in 15 species of two genera, Vriesea and Aechmea, native to Rio Grande do Sul, Brazil. This study is the first cytogenetic analysis of these taxa. The chromosome numbers are all n = 25, consistent with the proposed base number of x = 25 for Bromeliaceae. All examined taxa displayed regular bivalent pairing and chromosome segregation at meiosis. Observed meiotic abnormalities include univalents in metaphase I; missing or extra chromosomes and precocious division of centromeres in metaphase II; laggards in telophase I and anaphase II/telophase II. The high pollen viability (>88%) reflects a regular meiosis.     

New chromosome reports in the subtribes Diocleinae and Glycininae (Phaseoleae: Papilionoideae: Fabaceae)

The base chromosome number of x = 11 is the most probable in all the subtribes included in tribe Phaseoleae, although some aneuploid reduction is evident in Collaea and Galactia (Diocleinae) and chromosome duplications are seen in Amphicarpaea, Cologania and Glycine (Glycininae). The aims of this study were to improve the cytological knowledge of some species of Collaea and Galactia and to examine the anomalous counts reported for Calopogonium (Glycininae) and verify its taxonomic position. In addition, a molecular phylogeny was constructed using nuclear ribosomal DNA sequences (internal transcribed spacer region), and the chromosome number was optimized on the topology. In this work, the chromosome counts for Galactia lindenii, Galactia decumbens and Collaea cipoensis (all 2n = 20), and Calopogonium sericeum (2n = 22) are reported for the first time. The new reports for Galactia and Collaea species are in agreement with the chromosome number proposed for subtribe Diocleinae. The study rejects the concept of a cytologically anomalous Calopogonium and, based on the phylogenetic analysis, corroborates the position of this genus within subtribe Glycininae. The ancestral basic chromosome number of x = 11 proposed for Phaseoleae is in agreement with the evolutionary pathway of chromosome numbers analysed in this work. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 158 , 336–341.     

Ploidy in the alpine sedge Kobresia pygmaea (Cyperaceae) and related species: combined application of chromosome counts,new microsatellite markers and flow cytometry

Polyploidy is a fundamental mechanism in evolution, but is hard to detect in taxa with agmatoploidy or aneuploidy. We tested whether a combination of chromosome counting, microsatellite analyses and flow cytometric measurements represents a suitable approach for the detection of basic chromosome numbers and ploidy in Kobresia (Cyperaceae). Chromosome counting resulted in 2n = 64 for Kobresia pygmaea and K. cercostachys, 2n = 58 and 64 for K. myosuroides, and 2n = 72 for K. simpliciuscula. We characterized eight microsatellite loci for K. pygmaea, which gave a maximum of four alleles per individual. Cross‐species amplification was tested in 26 congeneric species and, on average, six of eight loci amplified successfully. Using flow cytometry, we confirmed tetraploidy in K. pygmaea. Basic chromosome numbers and ploidy were inferred from chromosome counts and the maximum number of alleles per locus. We consider the basic numbers as x = 16 and 18, with irregularities derived from agmatoploidy and aneuploidy. Across all Kobresia taxa, ploidy ranged from diploid up to heptaploid. The combination of chromosome counts and microsatellite analyses is an ideal method for the determination of basic chromosome numbers and for inferring ploidy, and flow cytometry is a suitable tool for the identification of deviating cytotypes. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 176 , 22–35.     

BIOSYSTEMATIC STUDIES IN THE BOUTELOUA CURTIPENDULA COMPLEX. III. POLLEN SIZE AS RELATED TO CHROMOSOME NUMBERS

Pollen size statistics are presented for 10 closely related species of Bouteloua and relationships between pollen size and chromosome numbers are presented for 13 populations of 5 species and 3 varieties. With 1 exception, all populations of all taxa conformed to a general pattern of pollen size dependent upon chromosome number. Chromosome numbers varied from 2n = 20 to 2n = ca. 103, with several independent aneuploid series. Statistical analyses were made of pollen size as related to chromosome number in the 3 varieties of B. curtipendula. These data showed that tetraploids (2n = 40) of var. tenuis had significantly greater pollen size and coefficient of variation than diploids (2n = 20) of the same variety. Similarly, aneuploids of var. curtipendula with 2n = 45 to 2n = 64 chromosomes had significantly larger and more variable pollen than tetraploids (2n = 40) of the same variety. Highly significant positive regression coefficients were obtained from analyses of chromosome numbers and mean pollen size, and chromosome numbers and coefficient of variation, for var. curtipendula. Regression coefficients for var. caespitosa populations with chromosome numbers over the hexaploid (2n = 60) level were not significant.     

CHROMOSOME COUNTS OF COMPOSITAE FROM THE UNITED STATES AND MEXICO

Chromosome counts are reported for 126 taxa representing 122 species and 61 genera of Compositae. First reports include two genera, Stylocline (n = 14) and Chromolepis (n = 19), 17 species, two infraspecific taxa, and one interspecific hybrid. Five additional taxa have chromosome numbers differing from previously published accounts. Carminatia is reinstated to generic status.     

CHROMOSOME NUMBERS IN PERITYLE AND RELATED GENERA (PERITYLANAE-COMPOSITAE)

Chromosome numbers are presented for 28 species of the genus Perityle, one putative inter-sectional hybrid, two species of Amauria, one species of Eutetras, and one species of Pericome. For Perityle, initial counts are recorded for 12 species of sect. Laphamia (n = 16, 17, 18, 36, ca. 102) and 11 species of sect. Perityle (n = 11, 12, 13, 16, 17, 18, 19, 34, 51). Chromosome numbers for the two species of Amauria (n = 18) are first reports for the genus. Including the current information, chromosome numbers have been recorded for 37 of the approximately 50 species recognized for Perityle. At least 24 taxa have numbers of n = 17, suggesting a base chromosome number of x = 17 for Perityle.     

CHROMOSOMAL RELATIONSHIPS AND TAXONOMIC CONSIDERATIONS IN THE GENUS CASSIA

Irwin , H. S. and B. L. Turner . (U. Texas, Austin.) Chromosomal relationships and taxonomic considerations in the genus Cassia. Amer. Jour. Bot. 47(4): 309-318. 1960.—All chromosome numbers known for the genus Cassia are arranged in a table which follows the infrageneric organization of Bentham (1871). Included are new counts for 88 taxa, of which 68 are first reports. Evidence is represented which suggests that the base number for the genus is 7, the other numbers having been derived by aneuploid loss from various euploid levels. The basic number 8, of general occurrence in the Subsection Leiocalyx, Section Chameacrista, is presumed to have been derived from the ancestral generic base by aneuploid gain of 1 chromosome. The results of the present study do not support elevation of the section Chamaecrista to generic rank. In general, the basic soundness of Bentham's revision is upheld.     

In vitro culture ofBellevalia romana (L.) Rchb.

Summary Bellevalia romana (L.) Rchb., a monocotyledonous plant characterized by few (2 n=2 x=8) and very large chromosomes, is a useful subject for studying developmental problemsin vitro. Cytological analysis of callus revealed that the majority of cells were diploid, but the remaining cells had aneuploid nuclei with a wide range of chromosome numbers, tetraploid and haploid nuclei. The frequency of aneuploid and polyploid cells was higher in callus grown in the presence of 2,4-D than in callus grown in NAA plus BAP. These nuclei seemed to increase with the duration of culture. The chromosome number distribution as determined by chromosome counts in calli at different culture times was confirmed by DNA cytophotometry. Chromosome number mosaicism (mixoploidy and aneusomaty) also occurred in all root apices of 9 out of 46 plantlets regenerated from callusvia adventitious shoots.     

Chromosome number variation and polyploidy in the genus Echinocereus (Cactaceae)

Analyses of meiotic and mitotic chromosomes were undertaken in 16 taxa of Echinocereus belonging to 12 species and all seven taxonomic sections (sensu Taylor). Chromosome numbers are reported for the first time for eight taxa, and previously published chromosome counts are confirmed for the remaining eight. Both diploid and polyploid counts were obtained. Eleven (69%) of the taxa surveyed were diploid (2n = 22); the five varieties of E. engelmannii were polyploid (2n = 44). Overall, chromosome counts are available for 23 of the 48 proposed species (sensu Taylor). Of these, 19 (82%) are diploid, and four (18%) are polyploid. Polyploid cytotypes are most common in the primitive sections, e.g., sections Erecti and Triglochidiatus, which suggests that polyploidy is probably a derived condition in Echinocereus. Polyploid taxa range from medium to high latitudes and elevations relative to the overall distribution of the genus. Polyploidy, hybridization, and cryptic chromosomal rearrangements are thought to be the major causes of the speciation events of the genus.     

PHYLOGENETIC IMPLICATIONS OF DIVERSE SEED TYPES,CHROMOSOME NUMBERS,AND POLLEN MORPHOLOGY IN HOUSTONIA (RUBIACEAE)

Seed and pollen morphology were studied by light microscopy and scanning electron microscopy in 39 North and Central American species of Houstonia (including Hedyotis, but excluding Oldenlandia). Chromosome counts were obtained for eight taxa, of which five lacked previous chromosome data. A chromosome number of n = 17 for Houstonia gracilis is a new base number for the genus. Seed external morphology in the genus is very diverse, including variation in compression, margins, testa surfaces, and elaboration of ventral cavities or depressions and hilar ridges or their absence. Three types of pollen apertures are recognized: colporate with type A os, colpororate, and colporate with type B os, the last the most advanced type, occurring in H. caerulea and related species. The 39 species are arranged in twelve groups, based on correlation of seed, pollen, and chromosome data. Geographic distribution provides supplementary evidence for the distinctness and integrity of the six principal groups each composed of 2–9 species. Five of the six minor groups each with one species need chromosome data to facilitate future taxonomic decisions. Chromosome numbers of x = 6, 7, 8, 9, 10, 11, 13, and 17 are now known in this genus, and phylogenetic implications of the combined data are discussed.     

Interstitial telomere‐like repeats in the monocot family Araceae

Combining molecular cytogenetics and phylogenetic modelling of chromosome number change can shed light on the types of evolutionary changes that may explain the haploid numbers observed today. Applied to the monocot family Araceae, with chromosome numbers of 2n = 8 to 2n = 160, this type of approach has suggested that descending dysploidy has played a larger role than polyploidy in the evolution of the current chromosome numbers. To test this, we carried out molecular cytogenetic analyses in 14 species from 11 genera, using probes for telomere repeats, 5S rDNA and 45S rDNA and a plastid phylogenetic tree covering the 118 genera of the family, many with multiple species. We obtained new chromosome counts for six species, modelled chromosome number evolution using all available counts for the family and carried out fluorescence in situ hybridization with three probes (5S rDNA, 45S rDNA and Arabidopsis‐like telomeres) on 14 species with 2n = 14 to 2n = 60. The ancestral state reconstruction provides support for a large role of descending dysploidy in Araceae, and interstitial telomere repeats (ITRs) were detected in Anthurium leuconerum, A. wendlingeri and Spathyphyllum tenerum, all with 2n = 30. The number of ITR signals in Anthurium (up to 12) is the highest so far reported in angiosperms, and the large repeats located in the pericentromeric regions of A. wendlingeri are of a type previously reported only from the gymnosperms Cycas and Pinus. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 177 , 15–26.     

Coreopsis nuecensis (Compositae) and a related new species from southern Texas

An aneuploid chromosome series ofn = 6, 7, 8, 9, and 10 inCoreopsis nuecensis Heller was analyzed for morphological, distributional, and genetic correlations with the chromosome number classes. The results show that two sets of basic chromosome numbers occur within what has been treated asC. nuecensis: n = 6, 7 andn = 9, 10. Then = 7 class frequently carries a pair of B chromosomes, forming then = 8 class. The base chromosome numbers are correlated with some minor but consistent morphological differences, with distributional differences, and with strong sterility barriers in the F₁ hybrids. It is proposed that then = 9, 10 segment be recognized as a new species,Coreopsis nuecensoides.     

Chromosome numbers and pollen fertility in the Senecio nemorensis group (Compositae) in the Carpathians

New chromosome numbers for two species from the Senecio nemorensis group: S. dacicus (2n = 40) and S. ucranicus (2n = 40) have been ascertained. The counts for S. germanicus Wallr. subsp. germanicus (2n = 40), S. hercynicus Herborg subsp. hercynicus (2n = 40), S. ovatus (P. Gaertn. et al.) Willd. subsp. ovatus (2n = 40) occurring in the Carpathians are also reported. The study confirmed only the known tetraploid chromosome number for the taxa of this group. The pollen fertility ranged from 82.09 to 92.99% in all examined species and subspecies, including their hybrids.     

CHROMOSOME COUNTS OF COMPOSITAE FROM MEXICO AND THE UNITED STATES

Chromosome counts of Compositae are reported from Mexico and the United States. First generic counts are from Egletes (n = 27), Hydropectis (n = 9), and Pippenalia (2n = ca. 60). First counts also are reported for 22 specific and infraspecific taxa in Baccharis, Erigeron, Flaveria, Gnaphalium, Grindelia, Helenium, Heterotheca, Melampodium, Montanoa, Perymenium, Piqueria, Senecio, Stevia, Verbesina, Xanthocephalum, and Zaluzania. Additional counts also are provided for 123 populations of taxa counted previously, of which eight are new numbers. Taxonomic implications of certain counts are discussed.