The Susceptibility of Monocotyledons to Agrobacterium tumefaciens

The susceptibility of 257 monocotyledon species belonging to 139 genera and 27 families, has been tested and the literature on this subject reviewed. In contrast with dicotyledons and gymnosperms, monocotyledons are much less susceptible to Agrobacterium tumefaciens: only 3 % of the species of monocotyledons tested were host plants, whereas 60 % of the dicotyledons and gymnosperms were susceptible. Only the closely related monocotyledon orders Liliales (6 families) and Arales (1 family) contained species that were susceptible. These results are consistent with a proposed taxonomic relationship between the Liliales and the dicotyledons. A correlation between host biochemical capabilities and susceptibility to crown gall is suggested.     

Granitic and gneissic outcrops (inselbergs) as centers of diversity for desiccation-tolerant vascular plants

Although desiccation tolerance is common in non-vascular plants, this adaptive trait is very rare in vascular plants. Desiccation-tolerant vascular plants occur particularly on rock outcrops in the tropics and to a lesser extent in temperate zones. They are found from sea level up to 2800 m. The diversity of desiccation-tolerant species as measured by number of species is highest in East Africa, Madagascar and Brazil, where granitic and gneissic outcrops, or inselbergs, are their main habitat. Inselbergs frequently occur as isolated monoliths characterized by extreme environmental conditions (i.e., edaphic dryness, high degrees of insolation). On tropical inselbergs, desiccation-tolerant monocotyledons (i.e., Cyperaceae and Velloziaceae) dominate in mat-like communities which cover even steep slopes. Mat-forming desiccation-tolerant species may attain considerable age (hundreds of years) and size (several m in height, for pseudostemmed species). Both homoiochlorophyllous and poikilochlorophyllous species occur. In their natural habitats, both groups survive dry periods of several months and regain their photosynthetic activity within a few days after rainfall. Other desiccation-tolerant species colonize shallow depressions, crevices and even temporarily water-filled rock pools on inselbergs. Desiccation-tolerant vascular plants occur in 13 families and are best represented within the monocotyledons and ferns. Only a few desiccation-tolerant dicots exist, in the Gesneriaceae, Myrothamnaceae and Scrophulariaceae. In total, about 330 species of vascular desiccation-tolerant plants are known, of which nearly 90% occur on inselbergs. With regard to morphological adaptations, the mat-forming monocotyledons are particularly remarkable due to the possession of roots with a velamen radicum, which is reported here in the genus Borya for the first time.     

The contribution of short repeats of low sequence complexity to large conifer genomes

The abundance and genomic organization of six simple sequence repeats, consisting of di-, tri-, and tetranucleotide sequence motifs, and a minisatellite repeat have been analyzed in different gymnosperms by Southern hybridization. Within the gymnosperm genomes investigated, the abundance and genomic organization of micro- and minisatellite repeats largely follows taxonomic groupings. We found that only particular simple sequence repeat motifs are amplified in gymnosperm genomes, while others such as (CAC)₅ and (GACA)₄ are present in only low copy numbers. The variation in abundance of simple sequence motifs reflects a similar situation to that found in angiosperms. Species of the two- and three-needle pine section Pinus are relatively conserved and can be distinguished from Pinus strobus which belongs to the five-needle pine section Strobus. The hybridization pattern of Picea species, bald cypress and gingko were different from the patterns detected in the Pinus species. Furthermore, sequences with homology to the plant telomeric repeat (TTTAGGG)_n have been analyzed in the same set of gymnosperms. Telomere-like repeats are highly amplified within two- and three- needle pine genomes, such as slash pine (Pinus elliottii Engelm. var. elliottii), compared to P. strobus, Picea species, bald cypress and gingko. P. elliottii var. elliottii was used as a representative species to investigate the chromosomal organization of telomere-like sequences by fluorescence in situ hybridization (FISH). The telomere-like sequences are not restricted to the ends of chromosomes; they form large intercalary and pericentric blocks showing that they are a repeated component of the slash pine genome.Conifers have genomes larger than 20000 Mbp, and our results clearly demonstrate that repeats of low sequence complexity, such to (CA)₈, (GA)₈, (GGAT)₄ and (GATA)₄, and minisatellite- and telomere-like sequences represent a large fraction of the repetitive DNA of these species. The striking differences in abundance and genome organization of the various repeat motifs suggest that these repetitive sequences evolved differently in the gymnosperm genomes investigated. Received: 1 October 1999 / Accepted: 3 November 1999     

Occurrence of Plant Growth Inhibitors in Tropical and Subtropical Vegetation

Acetone, ethanol and water extracts of mature fruits of yaupon (llex vomitoria Ait.) inhibited germination of mesquite (Prosopis juliflora Swartz DC. var. glandulosa (Torr.) Cockerell and sorghum (Sorghum bicolor (L.) Moench). Extracts of guava fruit (Psidium guajava L.) inhibited cucumber (Cucumis sativus L.) seed germination. Water soluble inhibitors were found in fruits, leaves, roots and bark of several tropical species representing 10 different families. Strong inhibition of cucumber seed germination and growth did not occur in sand when water extracts containing inhibitors were applied. Growth of corn, sorghum, cucumber and bean was reduced in soils collected beneath Malay apple (Eugenia malaccensis L.) trees. Plant growth-inhibitors occurred in all species studied in various plant parts, and some apparently affect the growth and ecology of other plant species.     

ENDOTHECIAL THICKENINGS IN ANTHERS OF PORATE MONOCOTYLEDONS

A survey of the presence of endothecial thickenings in 20 genera from 11 families of porate monocotyledons tested the long-standing hypothesis that porate anther dehiscence is correlated with the absence of thickenings. Although this hypothesis is widely repeated in texts, it has been supported by a limited, biased data base from studies of Ericaceae and Melastomataceae, two large families of dicotyledons. The results of our broad study of monocotyledons show that endothecial thickenings are present in most porate monocotyledons. Thickenings are absent in only two of the 11 porate families surveyed, Mayacaceae and Commelinaceae, both in the Commelinales. Thickenings are also absent in Xyris (Xyridaceae), a nonporate genus. These findings indicate that in monocotyledons porate anther dehiscence and the absence of thickenings are not as closely related as previously supposed.     

荷叶铁线蕨孢子体解剖结构和组织化学特征研究

荷叶铁线蕨为岩生珍稀蕨类植物,分布在中国重庆市万州、涪陵等极少地区.为揭示荷叶铁线蕨生长特性,采集栽培在种质资源圃中的荷叶铁线蕨根样、根状茎、在阳光下生长和在阴暗环境下生长的叶片,固定于甲醛-酒精-乙酸溶液中,用双面刀片进行徒手切片,分别用三种0.1％苏丹红、0.1％硫酸氢黄连素-苯胺兰、0.05％甲苯胺蓝染色剂染色,...     

中亚热带13种树种幼苗叶片和细根可溶性有机碳的数量特征和结构特征

植物叶片和细根输入的可溶性有机碳(Dissolved organic carbon, DOC)是森林生态系统最活跃的组成部分,对生态系统的碳循环有重要作用。以中亚热带13种典型树种为研究对象,测定其幼苗叶片和细根(0—1 mm和1—2 mm)的碳氮含量,淋溶产生的DOC浓度以及傅里叶红外光谱特征,分析不同树种和不同器官之间DOC的数量特征和结构特征。结果表明：(1)浙江桂在叶片和细根(0—1 mm和1—2 mm)的总碳含量上最高,竹柏在叶片和0—1 mm细根的总碳含量上最低,观光木在1—2 mm细根的总碳含量上最低。花榈木和罗汉松在叶片的总氮含量上分别为最高和最低,木荚红豆和观光木分别在0—1 mm和1—2 mm细根的总氮含量上最高,冬青在细根(0—1 mm和1—2 mm)的总氮含量上最低。(2)刨花楠、闽楠和浙江桂等樟科树种在叶片淋溶产生的DOC浓度上最高,而罗汉松和和竹柏等罗汉松科树种在叶片淋溶产生的DOC浓度上最低;花榈木和木荚红豆等红豆属树种在细根(0—1 mm和1—2 mm)淋溶产生的DOC浓度上最高;刨花楠、闽楠和浙江桂等樟科树种在细根(0—1 mm和1—2 mm)淋溶产生...     

Homology-dependent DNA Transfer from Plants to a Soil Bacterium Under Laboratory Conditions: Implications in Evolution and Horizontal Gene Transfer

DNA transfer was demonstrated from six species of donor plants to the soil bacterium, Acinetobacter spp. BD413, using neomycin phosphotransferase (nptII) as a marker for homologous recombination. These laboratory results are compatible with, but do not prove, DNA transfer in nature. In tobacco carrying a plastid insertion of nptII, transfer was detected with 0.1 g of disrupted leaves and in oilseed rape carrying a nuclear insertion with a similar quantity of roots. Transfer from disrupted leaves occurred in sterile soil and water, without the addition of nutrients. It was detected using intact tobacco leaves and intact tobacco and Arabidopsis plants in vitro. Transfer was dose-dependent and sensitive to DNase, and mutations in the plant nptII were recovered in receptor bacteria. DNA transfer using intact roots and plants in vitro was easily demonstrated, but with greater variability. Transfer varied with plant genome size and the number of repeats of the marker DNA in the donor plant. Transfer was not detected in the absence of a homologous nptII in the receptor bacteria. We discuss these results with reference to non-coding DNA in plant genomes (e.g., introns, transposons and junk DNA) and the possibility that DNA transfer could occur in nature.     

Johnkarlingia,a new genus of the synchytriaceae

A chytridiaceous fungous species was found parasitic in the roots of cauliflower (Brassica oleracea L. var. botrytis) and cabbage (Brassica oleracea L. var. capitata) in the heavy soil fields of Varanasi, U.P. The morphology of resting sporangia and life cycle of the pathogen revealed that no fungus species has hitherto been described befitting its developmental pattern. A new genus Johnkarlingia Pavgi & Singh has been proposed to accommodate the fungus with Johnkarlingia brassicae Singh & Pavgi as its type species. The taxonomy and affinities of the genus are discussed.     

Composition of epiphytic bacterial communities differs on petals and leaves

The epiphytic bacterial communities colonising roots and leaves have been described for many plant species. In contrast, microbiologists have rarely considered flowers of naturally growing plants. We identified bacteria isolated from the surface of petals and leaves of two plant species, Saponaria officinalis (Caryophyllaceae) and Lotus corniculatus (Fabaceae). The bacterial diversity was much lower on petals than on leaves of the same plants. Moreover, the bacterial communities differed strongly in composition: while Pseudomonadaceae and Microbacteriaceae were the most abundant families on leaves, Enterobacteriaceae dominated the floral communities. We hypothesise that antibacterial floral volatiles trigger the low diversity on petals, which is supported by agar diffusion assays using substances emitted by flowers and leaves of S. officinalis. These results suggest that bacteria should be included in the interpretation of floral traits, and possible effects of bacteria on pollination are proposed and discussed.     

Spatial distribution of cpDNA and mtDNA haplotypes in a hybrid zone betweenPinus pumila andP. parviflora var.pentaphylla (Pinaceae)

Pinus species exhibit paternal chloroplast inheritance and maternal mitochondrial inheritance. This independent inheritance of two cytoplasmic genomes provides an exceptional environment for discriminating female (seeds) and male (pollen) components of gene flow across hybridizing species. We obtained mitochondrial genetic markers diagnostic toP. parviflora var.pentaphylla andP. pumila by PCR amplification of the intron ofnad1 on mtDNA, and examined the spatial-distribution pattern of the mtDNA haplotypes in a hybrid zone betweenP. parviflora var.pentaphylla andP. pumila in the Tanigawa Mountains of Japan. These data, in conjunction with previous information on cpDNA haplotypes and needle morphology, revealed contrastive patterns of introgression of two cytoplasmic genomes. CpDNA introgression has occurred uni-directionally fromP. parviflora var.pentaphylla toP. pumila. Conversely, mtDNA introgression has occurred in the opposite direction, fromP. pumila toP. parviflora var.pentaphylla. Levels of introgression are roughly equivalent for cpDNA and mtDNA. The contrastive spatial distribution pattern of cpDNA and mtDNA haplotypes could be caused by differential movement of seeds and pollen for interspecific genetic exchange.     

Use of ri-mediated transformation for production of transgenic plants

Summary Agrobacterium rhizogenes-mediated transformation has been used to obtain transgenic plants in 89 different taxa, representing 79 species from 55 genera and 27 families. A diverse range of dicotyledonous plant families is represented, including one Gymnosperm family. In addition to the Ri plasmid, over half these plants have been transformed with foreign genes, including agronomically useful traits. Plants regenerated from hairy roots often show altered plant morphology such as dwarfing, increased rooting, altered flowering, wrinkled leaves and/or increased branching due to rol gene expression. These altered phenotypic features can have potential applications for plant improvement especially in the horticultural industry where such morphological alterations may be desirable. Use of A. rhizogenes and rol gene transformation has tremendous potential for genetic manipulation of plants and has been of particular benefit for improvement of ornamental and woody plants.     

Reproductive development and nuclear DNA content in angiosperms

Correlates of nuclear DNA content in angiosperms have been noted previously for a range of features, cellular to geographic. A new hypothesis, the correlation between nuclear DNA content and reproductive developmental features (after Cavalier-Smith, Journal of Cell Science 34, 247–268, 1978) is posed and tested here. Of three features tested (megasporogenesis, microsporogenesis, and endosperm development), megasporogenesis alone was shown to be correlated with nuclear DNA amount. The hypothesis was examined in 107 families of angiosperms using nonparametric statistics, and in 53 families of monocotyledons and outgroups using a phylogenetic test of association. A correlation was found between large genomes and successive microsporogenesis for all angiosperms, but not for monocots and dicots analyzed separately, thus underlining the importance of taking into account phylogenetic relationships in such studies. A correlation between cellular endosperm and large genomes in dicotyledons needs to be confirmed in a phylogenetic context. A tendency for deviations from monosporic megasporogenesis to occur in taxa that have a nuclear DNA content of over 9.0 pg/C was demonstrated using both phylogenetic and nonphylogenetic tests. It is hypothesized that cytoskeleton dynamics are affected in reproductive cells, enabling decoupling between nuclear and cytoplasmic cell cycles and leading to variation in reproductive development.     

Influence of ammonium and nitrate nutrition on enzymatic activity in soybean and sunflower

Under conditions of controlled pH, nitrate and ammonium are equally effective in supporting the growth of young soybean (Glycine max var. Bansei) and sunflower (Helianthus annuus L. var., Mammoth Russian) plans. Soybean contains an active nitrate reductase in roots and leaves, but the low specific activity of this enzyme in sunflower leaves indicates a dependency upon the roots for nitrate reduction. Suppression of nitrate reductase activity in sunflower leaves may be due to high concentrations of ammonia received from the roots. Nitrate reductase activity in leaves of nitrate-supplied soybean and sunflower follows closely the distribution of nitrate reductase. For the roots of both species, glutamic acid dehydrogenase activity was greater with ammonium than with nitrate. The glutamic acid dehydrogenase of ammonium roots is wholly NADH-dependent, whereas that of nitrate roots is active with NADH and NADPH. In leaves, an NADPH-dependent glutamic acid dehydrogenase appears to be responsible for the assimilation of translocated ammonia and ammonia formed by nitrate reduction.     

Triporate pollen in the Arecaceae

Triapertury is rare in monocotyledons. The well-defined, regularly spaced, circular porate apertures that occur in Arecaceae: Areca klingkangensis from Borneo, and species of the West African genus Sclerosperma, appear to be unique in monocotyledons. There is evidence to suggest that tripory in Arecaceae has been derived from trichotomosulcy, although in Areca equatorial zonosulcy may have an important role. The apical triporate, and zonosulcate pollen of Areca are described, as well as examples of mono- and trichotomosulcate pollen within the genus. The sub-apical distal triporate pollen of Sclerosperma gilletii and S. mannii are described. Notably, in Sclerosperma pollen, aperture position at post-meiotic tetrad stage follows the rare ‘Garside's rule’ (four groups of three apertures), previously only demonstrated for Proteaceae and Olacaceae. Possible reasons for the occurrence of these rare triporate pollen phenomena in palms are considered. The bearing this may have on the transition from the distal polar position of the single sulcus, to the radial symmetry of the triaperturate condition in many dicotyledons is discussed in comparison with other examples of triapertury in monocotyledons.     

Organ regulated expression of the Parasponia andersonii haemoglobin gene in transgenic tobacco plants

Summary Plant haemoglobin genes are known to occur in legume and non-legume families and in both nodulating (e.g. Parasponia andersonii) and non-nodulating species (e.g. Trema tomentosa). Their presence in non-nodulating plants raises the possibility that haemoglobins might serve a function in non-symbiotic tissues distinct from their role in the nitrogen-fixing root nodules induced by micro-organisms. We report here that a P. andersonii haemoglobin promoter can regulate expression of either the P. andersonii haemoglobin gene, or a hybrid construct with the bacterial chloramphenicol acetyltransferase gene (cat), in the nonsymbiotic plant, Nicotiana tabacum. Expression is predominantly in the roots, implying that haemoglobins might have a function in roots of non-nodulated plants. We have also observed a low level of haemoglobin protein in non-nodulated P. andersonii roots, but not leaves, supporting this assertion. The expression in transgenic plants will allow further characterization of the promoter sequences essential for the organ-specific expression of haemoglobins in nonsymbiotic tissues.     

Structural Characterisation of Alkaloids in Leaves and Roots of Stephania kwangsiensis by LC‐QTOF‐MS

Introduction

The tuberous roots of Stephania kwangsiensis, which contain bioactive alkaloids, are used as a traditional Chinese medicine. Overexploitation of the roots has made the plant increasingly rare, and the abundant leaves of the same plant may offer a potential alternative. However, there is insufficient phytochemical information for a comparison of alkaloid compositions in the two parts.

Objective

To characterise and compare the alkaloids in the leaves and roots of S. kwangsiensis.

Methods

The alkaloids in S. kwangsiensis were characterised using high pressure liquid chromatography coupled with positive electrospray ionisation quadrupole time‐of‐flight tandem mass spectrometry (HPLC‐(+)ESI‐QTOF‐MS/MS). The alkaloid compositions in the leaves and roots were compared by visual inspection combined with principal component analysis (PCA) of the HPLC‐MS data.

Results

Seventy‐five alkaloids comprising aporphine‐, proaporphine‐, protoberberine‐, benzylisoquinoline‐, bisbenzylisoquinoline‐ and morphine‐type alkaloids were identified or tentatively identified in the roots and leaves of S. kwangsiensis. Sixty‐three of these alkaloids have not been previously reported in this species, and three have not been previously reported in the literature. The roots and leaves had similarities in alkaloid composition but differences in the peak intensities of most alkaloids. The PCA revealed that the samples were clustered into two distinct groups, which corresponded to leaves and roots.

Conclusion

This study further clarified the chemical constituents in the roots of S. kwangsiensis, and revealed that diverse alkaloids were also present in the leaves. The comparative chemical profiling of the two parts provides useful information on their potential medicinal use. Copyright © 2017 John Wiley & Sons, Ltd.     

Two species with a peculiar evolution within the genus Pectobacterium suggest adaptation to a new environmental niche

Historically, research on Soft Rot Pectobacteriacea (SRP) has focused on economically important crops and ornamentals and knowledge of these bacteria outside the plant context remains poorly investigated. Recently, two closely related species Pectobacterium aquaticum and Pectobacterium quasiaquaticum were isolated from water and have not been isolated from any plant yet. To identify the distinctive characteristics of these two species, we performed a comparative genomic analysis of 80 genomes representing 19 Pectobacterium species and performed an evolutionary reconstruction. Both water species underwent a reduction in genome size associated with a high pseudogene content. A high gene loss was predicted at the emergence of both species. Among the 199 gene families missing from both P. aquaticum and P. quasiaquaticum genomes but present in at least 80% of other Pectobacterium genomes, COG analysis identified many genes involved in nutrient transport systems. In addition, many type II secreted proteins were also missing in both species. Phenotypic analysis revealed that both species had reduced pectinolytic activity, a biofilm formation defect, were highly motile and had reduced virulence on several plants. These genomic and phenotypic data suggest that the ecological niche of P. aquaticum and P. quasiaquaticum may differ from that of other Pectobacterium species.     

Penetration of very strong soils by seedling roots of different plant species

The abilities of seedling roots of twenty-two plant species to penetrate a strong growth medium were compared under controlled conditions. Seedlings were grown for 10 days in compression chambers filled with siliceous sandy soil at 0.2 kg kg^–1 water content and mean penetrometer resistance of 4.2 MPa. Root elongation and thickening were measured after growth. The results show that soil strength reduced the elongation of roots of all plant species by over 90% and caused the diameters of the roots to increase compared with control plants grown in vermiculite (0 MPa resistance).Differences in both root elongation and root diameter were observed among plant species. Generally, the roots of dicotyledons (with large diameters) penetrated the strong medium more than graminaceous monocotyledons (with smaller diameters). There was a significant positive correlation (r=0.78, p<0.05) between root diameter and elongation over all the species in the stressed plants. The species were ranked according to the relative root elongation and relative root thickening. Based on this ranking, lupin (Lupinus angustifolius), medic (Medicago scutelata) and faba bean (Vicia faba) were the species with the greatest thickening and elongation while wheat (Triticum aestivum), rhodesgrass (Chloris gayana) and barley (Hordeum vulgare) had the least. The weight of the seeds did not seem to influence either the thickening or elongation of the roots.