Antagonistic Coevolution Under Sexual Conflict

The theory of sexual conflict predicts that sexual coevolution will be very dynamic, with in principle perpetual evolutionary arms races and chases. These arms races are expected to stop once the costs of conflict adaptations become too high. We argue that this prediction is contingent on specific assumptions about the sexual interaction and the adaptations involved in the arms race. More generally, evolutionary arms races stop when the fitness benefit of further escalations is outweighed by the fitness costs. For this it is not necessary that the absolute costs of conflict must be high at the stable state, or that the population fitness must be decreased at equilibrium. We expect the outcome of sexual antagonistic coevolution to be determined by the possibility to reach compromises and by the relative ability of each sex to control the outcome of the interaction. We exemplify with a theoretical conflict model, which leads to population extinction when conflict is settled by armaments with expression-level determined costs. The model predicts a compromise with small conflict costs for the population, if costs are in addition determined by the extent of conflict between the sexes, which may be the case when the cost depends on behavioural antagonism.     

Coevolution of daily activity timing in a host–parasite system

Coevolutionary theories applied in the study of host–parasite systems indicate that lineages exhibit progressive trends in response to reciprocal selective pressures. Avian brood parasites have generated intense interest as models for coevolutionary processes. Similar to avian cuckoos, Polistes wasp social parasites usurp a nest and exploit the parental care of a congeneric species to rear their own brood. In the present study, we show a coevolutionary arms race in the daily activity pattern in a Polistes host–parasite pair. We measured the daily activity rate, in constant laboratory conditions, of both host and parasite females during the period in which nest usurpations occur. The parasites showed a hyperkinesis in the middle of the day. As the field observations suggested, this mid-day activity is used to perform host nest usurpation attempts. Timing the usurpations allows the parasite to maximize its usurpation attempts during daytime when the host defence is lower. A field comparison of host presence on the nest in two populations with different parasitism rates showed that populations under strong parasitic pressure exhibit timing counteradaptations to optimize nest defence. This study provides the first example of a mutual coadaptation in timing activity in a parasite–host system.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 96 , 399–405.     

Coevolution by different functional mechanisms modulates the structure and dynamics of antagonistic and mutualistic networks

A central problem in the study of species interactions is to understand the underlying ecological and evolutionary mechanisms that shape and are shaped by trait evolution in interacting assemblages. The patterns of interaction among species (i.e. network structure) provide the pathways for evolution and coevolution, which are modulated by how traits affect individual fitness (i.e. functional mechanisms). Functional mechanisms, in turn, also affect the likelihood of an ecological interaction, shaping the structure of interaction networks. Here, we build adaptive network models to explore the potential role of coevolution by two functional mechanisms, trait matching and exploitation barrier, in driving trait evolution and the structure of interaction networks. We use these models to explore how different scenarios of coevolution and functional mechanisms reproduce the empirical network patterns observed in antagonistic and mutualistic interactions and affect trait evolution. Scenarios assuming coevolutionary feedback with a strong effect of functional mechanism better reproduce the empirical structure of networks. Antagonistic and mutualistic networks, however, are better explained by different functional mechanisms and the structure of antagonisms is better reproduced than that of mutualisms. Scenarios assuming coevolution by strong trait matching between interacting partners better explain the structure of antagonistic networks, whereas those assuming strong barrier effects better reproduce the structure of mutualistic networks. The dynamics resulting from the feedback between strong functional mechanisms and coevolution favor the stability of antagonisms and mutualisms. Selection favoring trait matching reduces temporal trait fluctuation and the magnitude of arms races in antagonisms, whereas selection due to exploitation barriers reduces temporal trait fluctuations in mutualisms. Our results indicate that coevolutionary models better reproduce the network structure of antagonisms than those of mutualisms and that different functional mechanisms may favor the persistence of antagonistic and mutualistic interacting assemblages.     

Coevolution of a marine gastropod predator and its dangerous bivalve prey

The fossil record of the interaction between the predatory whelk Sinistrofulgur and its dangerous hard‐shelled bivalve prey Mercenaria in the Plio‐Pleistocene of Florida was examined to evaluate the hypothesis that coevolution was a major driving force shaping the species interaction. Whelks use their shell lip to chip open the shell of their prey, often resulting in breakage to their own shells, as well as to their prey. Mercenaria evolved a larger shell in response to an intensifying level of whelk predation. Reciprocally, an increase in attack success (ratio of successful to unsuccessful attacks) and degree of stereotypy of attack position by the predator suggest reciprocal adaptation by Sinistrofulgur to increase efficiency in exploiting hard‐shelled prey. A decrease in prey effectiveness (ratio of unsuccessful to total whelk predation attempts) and an increase in the minimum boundary of a size refuge from whelk predation for Mercenaria may indicate that predator adaptation has outpaced prey antipredatory adaptation. Evolutionary size increase in Sinistrofulgur most likely occurred in response to prey adaptation to decrease the likelihood of feeding‐induced shell breakage and unsuccessful predation when encounters with damage‐inducing prey occur, coupled with (or reinforced by) an evolutionary response to the whelk's own predators. Predator adaptation to Mercenaria best explains temporal changes in whelk behaviour to decrease performance loss (shell breakage) associated with feeding on hard‐shelled prey; this behavioural change limits attacks on prey to when the whelk's shell lip is thickest and most resistant to breakage. Despite evidence of reciprocal adaptation between predator and prey, the contribution of Mercenaria to Sinistrofulgur evolution is likely only a component of the predator's response to dangerous bivalve prey. This study highlights the importance of understanding the interactions among several species in order to provide the appropriate context to test evolutionary hypotheses about any specific pair of species. © 2003 The Linnean Society of London, Biological Journal of the Linnean Society, 2003, 80 , 409–436.     

Coevolution Predicts Direct Interactions between mtDNA-Encoded and nDNA-Encoded Subunits of Oxidative Phosphorylation Complex I

Despite years of research, the structure of the largest mammalian oxidative phosphorylation (OXPHOS) complex, NADH-ubiquinone oxidoreductase (complex I), and the interactions among its 45 subunits are not fully understood. Since complex I harbors subunits encoded by mitochondrial DNA (mtDNA) and nuclear DNA (nDNA) genomes, with the former evolving ∼ 10 times faster than the latter, tight cytonuclear coevolution is expected and observed. Recently, we identified three nDNA-encoded complex I subunits that underwent accelerated amino acid replacement, suggesting their adjustment to the elevated mtDNA rate of change. Hence, they constitute excellent candidates for binding mtDNA-encoded subunits.Here, we further disentangle the network of physical cytonuclear interactions within complex I by analyzing subunits coevolution. Firstly, relying on the bioinformatic analysis of 10 protein complexes possessing solved structures, we show that signals of coevolution identified physically interacting subunits with nearly 90% accuracy, thus lending support to our approach. When applying this approach to cytonuclear interaction within complex I, we predict that the ‘rate-accelerated’ nDNA-encoded subunits of complex I, NDUFC2 and NDUFA1, likely interact with the mtDNA-encoded subunits ND5/ND4 and ND5/ND4/ND1, respectively. Furthermore, we predicted interactions among mtDNA-encoded complex I subunits. Using the yeast two-hybrid system, we experimentally confirmed the predicted interactions of human NDUFC2 with ND4, the interactions of human NDUFA1 with ND1 and ND4, and the lack of interaction of NDUFC2 with ND3 and NDUFA1, thus providing a proof of concept for our approach.Our study shows, for the first time, evidence for direct interactions between nDNA-encoded and mtDNA-encoded subunits of human OXPHOS complex I and paves the path towards deciphering subunit interactions within complexes lacking three-dimensional structures. Our subunit-interactions-predicting method, ComplexCorr, is available at http://webclu.bio.wzw.tum.de/complexcorr.     

Chaotic Red Queen coevolution in three-species food chains

Coevolution between two antagonistic species follows the so-called ‘Red Queen dynamics’ when reciprocal selection results in an endless series of adaptation by one species and counteradaptation by the other. Red Queen dynamics are ‘genetically driven’ when selective sweeps involving new beneficial mutations result in perpetual oscillations of the coevolving traits on the slow evolutionary time scale. Mathematical models have shown that a prey and a predator can coevolve along a genetically driven Red Queen cycle. We found that embedding the prey–predator interaction into a three-species food chain that includes a coevolving superpredator often turns the genetically driven Red Queen cycle into chaos. A key condition is that the prey evolves fast enough. Red Queen chaos implies that the direction and strength of selection are intrinsically unpredictable beyond a short evolutionary time, with greatest evolutionary unpredictability in the superpredator. We hypothesize that genetically driven Red Queen chaos could explain why many natural populations are poised at the edge of ecological chaos. Over space, genetically driven chaos is expected to cause the evolutionary divergence of local populations, even under homogenizing environmental fluctuations, and thus to promote genetic diversity among ecological communities over long evolutionary time.     

动物及其肠道菌群的协同进化研究

动物自身合成一些关键营养物质的能力缺失,转而依赖体内的共生物来完成相应功能,如动物体内共生细菌能帮助宿主从食物中提取营养物质,并能合成一些关键代谢反应的化合物。结合国内外在动物及其肠道菌群的协同进化的研究进展,从三个方面进行了归纳:(1)动物及其肠道微生物组成与功能的协同进化研究;(2)动物行为与肠道微生物的关系;(3)共生肠道微生物在人类或动物自身消化食物、营养获取、健康和疾病方面发挥的重要作用。     

The evolution of bacterial resistance against bacteriophages in the horse chestnut phyllosphere is general across both space and time

Insight to the spatial and temporal scales of coevolution is key to predicting the outcome of host–parasite interactions and spread of disease. For bacteria infecting long-lived hosts, selection to overcome host defences is just one factor shaping the course of evolution; populations will also be competing with other microbial species and will themselves be facing infection by bacteriophage viruses. Here, we examine the temporal and spatial patterns of bacterial adaptation against natural phage populations from within leaves of horse chestnut trees. Using a time-shift experiment with both sympatric and allopatric phages from either contemporary or earlier points in the season, we demonstrate that bacterial resistance is higher against phages from the past, regardless of spatial sympatry or how much earlier in the season phages were collected. Similarly, we show that future bacterial hosts are more resistant to both sympatric and allopatric phages than contemporary bacterial hosts. Together, our results suggest the evolution of relatively general bacterial resistance against phages in nature and are contrasting to previously observed patterns of phage adaptation to bacteria from the same tree hosts over the same time frame, indicating a potential asymmetry in coevolutionary dynamics.     

Phylogeography and the geographic cline in the armament of a seed-predatory weevil: effects of historical events vs. natural selection from the host plant

Japanese camellia (Camellia japonica) and its seed predator, the camellia weevil (Curculio camelliae), provide a notable example of a geographic mosaic of coevolution. In the species interaction, the offensive trait of the weevil (rostrum length) and the defensive trait of the plant (pericarp thickness) are involved in a geographically-structured arms race, and these traits and selective pressures acting on the plant defence vary greatly across a geographical landscape. To further explore the geographical structure of this interspecific interaction, we tested whether the geographical variation in the weevil rostrum over an 800-km range along latitude is attributed to local natural selection or constrained by historical (phylogeographical) events of local populations. Phylogeographical analyses of the mitochondrial DNA sequences of the camellia weevil revealed that this species has experienced differentiation into two regions, with a population bottleneck and subsequent range and/or population expansion within each region. Although these phylogeographical factors have affected the variation in rostrum length, analyses of competing factors for the geographical variation revealed that this pattern is primarily determined by the defensive trait of the host plant rather than by the effects of historical events of populations and a climatic factor (annual mean temperature). Thus, our study suggests the overwhelming strength of coevolutionary selection against the effect of historical events, which may have limited local adaptation.     

Correlated evolution of male and female morphologles in water striders

Sexually antagonistic coevolution may be an important force in the evolution of sexual dimorphism. We undertake a comparative study of correlated evolution of male and female morphologies in a clade of 15 water strider species in the genus Gerris (Heteroptera: Gerridae). Earlier studies have shown that superfluous matings impose costs on females, including increased energetic expenditure and predation risk, and females therefore resist males with premating struggles. Males of some species possess grasping structures and females of some species exhibit distinct antigrasping structures, which are used to further the interests of each sex during these premating struggles. We use this understanding, combined with coevolutionary theory, to derive a series of a priori predictions concerning both the types of traits in the two sexes that are expected to coevolve and the coevolutionary dynamics of these traits expected under sexually antagonistic coevolution. We then assess the actual pattern of correlated evolution in this clade with new morphometric methods combined with standard comparative techniques. The results were in agreement with the a priori predictions. The level of armament (different abdominal structures in the two sexes) was closely correlated between the sexes across species. Males are well adapted to grasping females in species in which females are well adapted to thwart harassing males and vice versa. Furthermore, our comparative analyses supports the prediction that correlated evolution of armament in the two sexes should be both rapid and bidirectional.     

Replicator-dynamics models of sexual conflict

Evolutionary conflict between the sexes has been studied in various taxa and in various contexts. When the sexes are in conflict over mating rates, natural selection favors both males that induce higher mating rates and females that are more successful at resisting mating attempts. Such sexual conflict may result in an escalating coevolutionary arms race between males and females. In this article, we develop simple replicator-dynamics models of sexual conflict in order to investigate its evolutionary dynamics. Two specific models of the dependence of a female's fitness on her number of matings are considered: in model 1, female fitness decreases linearly with increasing number of matings and in model 2, there is an optimal number of matings that maximizes female fitness. For each of these models, we obtain the conditions for a coevolutionary process to establish costly male and female traits and examine under what circumstances polymorphism is maintained at equilibrium. Then we discuss how assumptions in previous models of sexual conflict are translated to fit to our model framework and compare our results with those of the previous studies. The simplicity of our models allows us to consider sexual conflict in various contexts within a single framework. In addition, we find that our model 2 shows more complicated evolutionary dynamics than model 1. In particular, the population exhibits bistability, where the evolutionary outcome depends on the initial state, only in model 2.     

A phylogenetic analysis of the evolution of sexual dimorphism and mating systems in water striders (Hemiptera: Gerridae)

Conflicts over mating decisions characterize the sexual behaviour of many insects, in particular when males encounter females that already carry enough sperm to fertilize their eggs, since a mating often will inflict greater costs than benefits upon females. Therefore, coevolutionary models predict adaptation and counter-adaptation by the sexes in a battle to control the outcome of sexual encounters. A phylogenetic analysis was performed on patterns of sexual dimorphism and mating systems within water striders (Hemiptera, Gerridae). Phylogenetic effects or 'constraints' have significantly shaped patterns of sexual dimorphism in female/ male size ratios, legs and genitalia of males, and the structure of the female abdomen. Males of ancestral gerrids were probably slightly smaller than conspecific females, had powerful fore legs adapted to grasp the female's thorax during mating, and had clasping genitalic structures suited to grasp or pinch the female posteriorly. Most gerrids have a female/male size ratio between 1.05 and 1.14, but more pronounced sexual size ratios (above 1.25) have independently evolved several times in the family, usually in association with extended post-copulatory mate guarding. The comparative, phylogenetic analysis suggests coevolution of female anticlasper and male clasping devices for the clade comprising the subfamilies Cylindrostethinae, Ptilomerinae, and Halobatinae while female anticlasper devices have evolved in the absence of male clasping genitalia in the Gerrinae. The ancestral and most common mating system in gerrids is 'scramble competition polygyny' from which has evolved 'resource defence polygyny' at least four times independently of each other. The phylogenetic effects on patterns of mating behaviour are much less obvious, as exemplified by the large amount of interspecific variation in some genera.     

Coevolution of non-fertile sperm and female receptivity in a butterfly

Sexual conflict can promote rapid evolution of male and female reproductive traits. Males of many polyandrous butterflies transfer nutrients at mating that enhances female fecundity, but generates sexual conflict over female remating due to sperm competition. Butterflies produce both normal fertilizing sperm and large numbers of non-fertile sperm. In the green-veined white butterfly, Pieris napi, non-fertile sperm fill the females'' sperm storage organ, switching off receptivity and thereby reducing female remating. There is genetic variation in the number of non-fertile sperm stored, which directly relates to the female''s refractory period. There is also genetic variation in males'' sperm production. Here, we show that females'' refractory period and males'' sperm production are genetically correlated using quantitative genetic and selection experiments. Thus selection on male manipulation may increase the frequency of susceptible females to such manipulations as a correlated response and vice versa.     

Coevolution of compositional protocells and their environment

The coevolution of environment and living organisms is well known in nature. Here, it is suggested that similar processes can take place before the onset of life, where protocellular entities, rather than full-fledged living systems, coevolve along with their surroundings. Specifically, it is suggested that the chemical composition of the environment may have governed the chemical repertoire generated within molecular assemblies, compositional protocells, while compounds generated within these protocells altered the chemical composition of the environment. We present an extension of the graded autocatalysis replication domain (GARD) model--the environment exchange polymer GARD (EE-GARD) model. In the new model, molecules, which are formed in a protocellular assembly, may be exported to the environment that surrounds the protocell. Computer simulations of the model using an infinite-sized environment showed that EE-GARD assemblies may assume several distinct quasi-stationary compositions (composomes), similar to the observations in previous variants of the GARD model. A statistical analysis suggested that the repertoire of composomes manifested by the assemblies is independent of time. In simulations with a finite environment, this was not the case. Composomes, which were frequent in the early stages of the simulation disappeared, while others emerged. The change in the frequencies of composomes was found to be correlated with changes induced on the environment by the assembly. The EE-GARD model is the first GARD model to portray a possible time evolution of the composomes repertoire.     

中国种子植物内生真菌资源及菌植协同进化

综述了中国种子植物内生真菌资源研究概况,比较了裸子植物和被子植物内生真菌种类,它们都具有肉座菌目(Hypocreales),粪壳菌目(Sordariales),散囊菌目(Eurotiales),毛霉目(Mucorales)及不产孢类(Myceliasterilia)内生真菌。裸子植物内生真菌涉及52个属,既包括高等的子囊菌和担子菌,也包括低等的卵菌(Oomycetes)和接合菌(Zygomycetes)类。被子植物涉及60个属,主要为高等的子囊菌(Ascomycetes)和担子菌(Basidiomycetes),低等的卵菌和接合菌报道很少。双子叶植物涉及40个属,单子叶植物内生真菌涉及30个属,两类被子植物所报道的内生真菌只有11个属相同。裸子植物与双子叶植物内生真菌相似程度较高,都具有炭角菌目(Xylariales)、格孢腔菌目(Pleosporales)、柔膜菌目(Helotiales)和白粉菌目(Erysiphales),刺盘孢菌属(Colletotrichum)、拟茎点霉属(Phomopsis)、枝孢霉属(Cladosporium)、地霉属(Geotrichum)等内真菌,共20个属相同。各类种子植物具有自己独特的一些内生真菌。还对植物与其内生真菌的协同进化关系进行了分析。     

Effects of predation on real‐time host–parasite coevolutionary dynamics

The impact of community complexity on pairwise coevolutionary dynamics is theoretically dependent on the extent to which species evolve generalised or specialised adaptations to the multiple species they interact with. Here, we show that the bacteria Pseudomonas fluorescens diversifies into defence specialists, when coevolved simultaneously with a virus and a predatory protist, as a result of fitness trade‐offs between defences against the two enemies. Strong bacteria–virus pairwise coevolution persisted, despite strong protist‐imposed selection. However, the arms race dynamic (escalation of host resistance and parasite infectivity ranges) associated with bacteria–virus coevolution broke down to a greater extent in the presence of the protist, presumably through the elevated genetic and demographic costs of increased bacteria resistance ranges. These findings suggest that strong pairwise coevolution can persist even in complex communities, when conflicting selection leads to evolutionary diversification of different defence strategies.     

The phylogeny of diving beetles (Coleoptera: Dytiscidae) and the evolution of sexual conflict

A model of evolution based on conflicts of interest between the sexes over mating decisions is examined in relation to diving beetles (Dytiscidae). The model predicts the following evolutionary sequence: (1) cost to females of mating increases, (2) females evolve behavioural resistance to male mating attempts, (3) males evolve devices to overcome female resistance, and (4) females evolve morphological counter-adaptations to the male devices. This model is tested using species of Dytiscidae, in which (1) some species have a very long mating duration while others mate quickly, (2) females of some species resist male mating attempts by swift and erratic swimming when seized by a male, (3) males of some species possess a grasping device in the form of sucker-shaped setae on the legs used to adhere to the pronota or elytra of females prior to mating, and (4) females of some species have a modified dorsal cuticle with irregular sculpturing which appears to interfere with the male adhesive setae. The predicted order of evolution of some of these features was tested in a cladistic analysis of 52 taxa in Dytiscidae and Hygrobiidae using characters from adult and larval morphology and a portion of the gene wingless . The combined analysis resulted in nine most parsimonious cladograms. The consensus cladogram of these indicates that male sucker setae arose a single time in a clade of Dytiscinae. Nested within this clade are five groups with an independently derived, modified dorsal cuticle in females. This pattern of characters in Dytiscinae is consistent with the prediction implied by the model of sexual selection. The utility of wingless as a marker for phylogenetic analysis of diving beetles is discussed, and the resulting phylogeny is compared with previous analyses and current classification.  © 2003 The Linnean Society of London, Biological Journal of the Linnean Society , 2003, 79 , 359–388.     

Genomic Signatures of Coevolution between Nonmodel Mammals and Parasitic Roundworms

Antagonistic coevolution between host and parasite drives species evolution. However, most of the studies only focus on parasitism adaptation and do not explore the coevolution mechanisms from the perspective of both host and parasite. Here, through the de novo sequencing and assembly of the genomes of giant panda roundworm, red panda roundworm, and lion roundworm parasitic on tiger, we investigated the genomic mechanisms of coevolution between nonmodel mammals and their parasitic roundworms and those of roundworm parasitism in general. The genome-wide phylogeny revealed that these parasitic roundworms have not phylogenetically coevolved with their hosts. The CTSZ and prolyl 4-hydroxylase subunit beta (P4HB) immunoregulatory proteins played a central role in protein interaction between mammals and parasitic roundworms. The gene tree comparison identified that seven pairs of interactive proteins had consistent phylogenetic topology, suggesting their coevolution during host–parasite interaction. These coevolutionary proteins were particularly relevant to immune response. In addition, we found that the roundworms of both pandas exhibited higher proportions of metallopeptidase genes, and some positively selected genes were highly related to their larvae’s fast development. Our findings provide novel insights into the genetic mechanisms of coevolution between nonmodel mammals and parasites and offer the valuable genomic resources for scientific ascariasis prevention in both pandas.