The disruption of dominance hierarchies by a non-native species: an individual-based analysis

We studied the effects of the exotic rainbow trout (Oncorhynchus mykiss) on the performance and the dominance hierarchy of native Atlantic salmon (Salmo salar) at the group and individual level using laboratory and semi-natural experiments. At the group level, we compared the effects of interspecific and intraspecific competition (substitutive and additive design) on behavioural responses and growth of young-of-the-year Atlantic salmon. At the individual level, the same design was used to evaluate: (1) the temporal consistency of behavioural responses, dominance hierarchy and growth rate of Atlantic salmon; (2) the pattern of correlations between behaviours; and (3) the relationship between individual growth rate and behaviour. In the laboratory, group-level analyses revealed a weak but similar effect of rainbow trout and intraspecific competition on the behaviour and growth of Atlantic salmon. In contrast, individual-based analyses demonstrated that rainbow trout (but not intraspecific competition) strongly affected behavioural strategy, dominance hierarchy and growth trajectory of individual Atlantic salmon. Specifically, behaviours, dominance status and growth rate of salmon were temporally consistent in the intraspecific environment, while these patterns were disrupted when rainbow trout were present. Similarly, we found that rainbow trout strongly affected behavioural correlations and the relationships between individual growth rate and behaviour. The semi-natural experiments confirmed these results as interspecific competition affected relationships between individual growth rate of salmon, initial weight and activity index. Overall, individual-based analyses highlighted important mechanisms that were concealed at the group level, and that may be crucial to understand ecological and evolutionary consequences of exotic species. Moreover, these results demonstrated that competition with an exotic species disrupts the hierarchical relationship among native individuals and may therefore represent a potential for a shift in selective pressure.     

Specific features of growth and energetics of juvenile rainbow trout Parasalmo (Oncorhynchus) mykiss at constant temperature and its short-time periodic deviations into the upper suboptimal zone

It was shown that short-time periodical temperature fluctuations within the upper temperature zone suboptimal for the growth of juvenile rainbow trout Parasalmo (Oncorhynchus) mykiss exerts a favorable effect on the growth and energetics of fish. Under variable temperature conditions, an increase in the rate of growth and improvement of energetic and production indices of juvenile trout, as compared to constant thermal conditions optimal for growth, are observed. Efficiency of food conversion is increased, and oxygen expenditure for the gain of body weight unit is decreased. Optimization of life activity and energetics of rainbow trout observed under variable temperature conditions indicates the need for subsequent discussion and clarification of the concept of an ecological optimum with respect to the temperature factor for fish and other poikilothermal hydrobionts.     

Acclimation effect on fish behavioural characteristics: determination of appropriate acclimation period for different species

In the present study, the authors investigated the effect of acclimation duration (up to 4 h) on behavioural characteristics of taxonomically and functionally different fish species, i.e., the migratory rheophilic salmonids rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar), and the non-migratory eurytopic European perch (Perca fluviatilis) and three-spined stickleback (Gasterosteus aculeatus). Specifically, the authors explored fish behavioural patterns based on specific endpoints (average, maximum and angular velocity) during the acclimation period, and determined the acclimation period suitable for the tested fish species. The performed behavioural data analysis showed that the minimum time needed to adjust fish activity to a more stable (baseline) level should be at least 2 h for O. mykiss and S. salar and 1 h for G. aculeatus. Nonetheless, P. fluviatilis behaviour did not show significant changes during the 4 h acclimation. The results of this study revealed that the effect of the acclimation duration on such rheophilic species as O. mykiss and S. salar was greater than that on the eurytopic species P. fluviatilis and G. aculeatus, indicating that acclimation period is important in managing fish stress before behavioural observations. For all species, the highest variability was found in the endpoint of maximum velocity, and the lowest in that of angular velocity. This study showed that before starting actual toxicity testing experiments, it is important to determine an appropriate, species-specific acclimation period.     

Magnetic field perception in the Rainbow Trout, <Emphasis Type="Italic">Oncorhynchus</Emphasis> <Emphasis Type="Italic">mykiss</Emphasis>

In this study, we present evidence for the perception of different magnetic field parameters in a facultative anadromous fish species of the family Salmonidae. Magnetic field perception of the rainbow trout, Oncorhynchus mykiss, was demonstrated with a heartbeat conditioning test. The electrocardiogram was measured with subcutaneously inserted silver wire electrodes in freely swimming fish. We demonstrate a conditioned response (i.e. a significant longer interval between two heartbeats) to an intensity/inclination shift for three adult and two juvenile rainbow trouts. Moreover, a conditioned response to a 90° direction shift was demonstrated for three adult and two juvenile trouts. These findings support the hypothesis that the rainbow trout is able to perceive different magnetic field parameters. Furthermore, the study demonstrates magnetosensation in different developmental stages in the rainbow trout, i.e. juvenile and adult fish.     

Parallel introgression and selection on introduced alleles in a native species

As humans cause the redistribution of species ranges, hybridization between previously allopatric species is on the rise. Such hybridization can have complex effects on overall fitness of native species as new allelic combinations are tested. Widespread species introductions provide a unique opportunity to study selection on introgressed alleles in independent, replicated populations. We examined selection on alleles that repeatedly introgressed from introduced rainbow trout (Oncorhynchus mykiss) into native westslope cutthroat trout (Oncorhynchus clarkii lewisi) populations in western Canada. We found that the degree of introgression of individual single nucleotide polymorphisms from the invasive species into the native is correlated between independent watersheds. A number of rainbow trout alleles have repeatedly swept to high frequency in native populations, suggesting parallel adaptive advantages. Using simulations, we estimated large selection coefficients up to 0.05 favoring several rainbow trout alleles in the native background. Although previous studies have found reduced hybrid fitness and genome‐wide resistance to introgression in westslope cutthroat trout, our results suggest that some introduced genomic regions are strongly favored by selection. Our study demonstrates the utility of replicated introductions as case studies for understanding parallel adaptation and the interactions between selection and introgression across the genome. We suggest that understanding this variation, including consideration of beneficial alleles, can inform management strategies for hybridizing species.     

Becoming a better swimmer: structural complexity enhances agility in a captive‐reared fish

To test whether swimming skills can be improved by exposure to structurally complex environments, juvenile rainbow trout Oncorhynchus mykiss were reared in either physically enriched or plain tanks for 2 months and were then screened to test their ability to swim along a channel while avoiding obstructions. The results show that even a relatively short exposure period to enrichment improves O. mykiss swimming agility.     

Physiological causes and consequences of social status in salmonid fish

Social interactions in small groups of juvenile rainbow trout(Oncorhynchus mykiss) lead to the formation of dominance hierarchies.Dominant fish hold better positions in the environment, gaina larger share of the available food and exhibit aggressiontowards fish lower in the hierarchy. By contrast, subordinatefish exhibit behavioural inhibition, including reduced activityand feeding. The behavioural characteristics associated withsocial status are likely the result of changes in brain monoaminesresulting from social interactions. Whereas substantial physiologicalbenefits, including higher growth rates and condition factor,are experienced by dominant trout, low social status appearsto be a chronic stress, as indicated by sustained elevationof circulating cortisol concentrations in subordinate fish.High cortisol levels, in turn, may be responsible for many ofthe deleterious physiological consequences of low social status,including lower growth rates and condition factor, immunosuppressionand increased mortality. Circulating cortisol levels may alsobe a factor in determining the outcome of social interactionsin pairs of rainbow trout, and hence in determining social status.Rainbow trout treated with cortisol were significantly morelikely to become subordinate in paired encounters with smalleruntreated conspecifics.     

Effects of species invasion on population dynamics,vital rates and life histories of the native species

Invasions occurring in natural environments provide the opportunity to study how vital rates change and life histories evolve in the presence of a competing species. In this work, we estimate differences in reproductive traits, individual growth trajectories, survival, life histories and population dynamics between a native species living in allopatry and in sympatry with an invasive species of the same taxonomic Family. We used as a model system marble trout Salmo marmoratus (native species) and rainbow trout Oncorhynchus mykiss (non-native) living in the Idrijca River (Slovenia). An impassable waterfall separates the stream into two sectors only a few 100 meters apart: a downstream sector in which marble trout live in sympatry with rainbow trout and an upstream sector in which marble trout live in allopatry. We used an overarching modelling approach that uses tag-recapture and genetic data (>2,500 unique marble and rainbow trout were sampled and genotyped) to reconstruct pedigrees, test for synchrony of population dynamics and model survival and growth, while accounting for individual heterogeneity. The population dynamics of the two marble trout populations and of rainbow trout were synchronous. We found higher prevalence of younger parents, higher mortality and lower population density in marble trout living in sympatry with rainbow trout than in marble trout living in allopatry. There were no differences in the average individual growth trajectories between the two marble trout populations. Faster life histories of marble trout living in sympatry with rainbow trout are consistent with predictions of life history theory.     

Diagnostic single nucleotide polymorphisms for identifying westslope cutthroat trout (Oncorhynchus clarki lewisi), Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri) and rainbow trout (Oncorhynchus mykiss)

We describe 12 diagnostic single nucleotide polymorphism (SNP) assays for use in species identification among rainbow and cutthroat trout: five of these loci have alleles unique to rainbow trout (Oncorhynchus mykiss), three unique to westslope cutthroat trout (O. clarkii lewisi) and four unique to Yellowstone cutthroat trout (O. clarkii bouvieri). These diagnostic assays were identified using a total of 489 individuals from 26 populations and five fish hatchery strains.     

Analysis of microsatellite variation in the rainbow trout <Emphasis Type="Italic">Parasalmo (Oncorhynchus) mykiss</Emphasis> from Kamchatka

Genetic variation of Kamchatka rainbow trout Parasalmo (O.) mykiss was examined using 10 microsatellite DNA loci, and phylogeographic comparison with other representatives of the species across the distribution range was performed. It was demonstrated that Kamchatka populations differed from other geographic groups of rainbow trout in a number of microsatellite loci. These populations also displayed distinct clustering and were characterized by lower genetic diversity. Analysis of a set of 26 different microsatellite loci (personal and literature data) demonstrated that most of the populations within the Kamchatka region were separated from one another, characterized by marked geographic differentiation, and affiliation to certain river basins. In Kamchatka rainbow trout, with high degree of probability, three geographic clusters (northwestern, southwestern, and eastern) were identified. In general, analysis of microsatellite DNA supported the data on low genetic diversity of the Kamchatka group Parasalmo (O.) mykiss, based on the variation estimates for a number of genes of nuclear and mitochondrial DNA, and allozyme loci.     

Effects of intracoelomic transmitter implantation on metabolic rate,swimming performance,growth and survival in juveniles of two salmonids

In this study, we investigated the effects of acoustic tag implantation on standard and routine metabolic rate (SMR and RMR, estimated via oxygen consumption), critical swimming speed (U_crit), survival and growth in juveniles of rainbow trout Oncorhynchus mykiss and lake trout Salvelinus namaycush. Tag burdens ranged from 1.8% to 7.5% across the two species. Growth rates in acoustic-tagged fish were equal to or higher than those in other treatments. Acoustic-tagged S. namaycush had a marginally lower U_crit than controls but that effect was not replicated in the O. mykiss experiment. Tagging did not have clear effects on metabolic rate but there was an interaction whereby SMR and RMR tended to increase with time since surgery in tagged O. mykiss but not in other treatments (the same trend did not occur in S. namaycush). Survival was high across treatments (mean 98% survival among O. mykiss, 97.5% among S. namaycush). There were no statistically significant effects of tag burden (percentage of body mass) except for a weak negative relationship with growth rate (across species) and a weak positive relationship with U_crit but only in the O. mykiss. Collectively, our findings suggest there were minor, context-dependent effects of acoustic tagging in juvenile S. namaycush and O. mykiss during an eight-week laboratory experiment. Further research will be required to assess whether tagging can cause meaningful behavioural effects in these species in captivity or in the wild and whether there is a tag burden threshold above which deleterious effects consistently occur.     

Cannibalism in non‐native brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss stream‐dwelling populations

Introduced and allopatric populations of brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss were sampled in Slovenia for stable isotope analysis to assess dietary niche shifts through ontogeny and estimate the propensity for cannibalism. Both S. trutta and O. mykiss are cannibals, with higher average relative contribution of conspecific assimilated energy for S. trutta (27·9%) compared with O. mykiss (7·7%). The smallest cannibal was 166 mm in the S. trutta population and 247 mm in the O. mykiss population.     

A preliminary assessment of the impact of alien rainbow trout (Oncorhynchus mykiss) on indigenous fishes of the upper Berg River,Western Cape Province,South Africa

Impacts of alien rainbow trout (Oncorhynchus mykiss) on critically endangered Berg River redfin (Pseudobarbus burgi), Cape kurper (Sandelia capensis) and Cape galaxias (Galaxias zebratus) in the upper Berg River were investigated in terms of predation and spatial interactions. Trout stomach contents revealed that invertebrates dominate trout diet within the study area, whilst only six fish were recovered from 45 stomachs. The apparent low fish predation success of O. mykiss within the stream suggests a smaller impact compared to that of other alien piscivores such as bass (Micropterus spp.). Galaxias zebratus was the only fish species identified as prey, and its conservation status in the river requires further investigation. Snorkelling surveys revealed that rainbow trout co-exist with S. capensis and adult P. burgi within pools on this river. Galaxias zebratus was absent from the pools, while P. burgi juveniles were segregated from rainbow trout along a depth gradient, possibly indicating avoidance behaviour. Sandelia capensis juveniles may avoid predation by hiding under rocks. Rainbow trout probably compete with indigenous fish for food and space in the pools, though this could not be quantified. The impacts of O. mykiss on all indigenous fauna within the river are likely to be density-dependent.     

Redd superimposition by introduced rainbow trout,oncorhynchus mykiss, on native charrs in a japanese stream

Spawning redd superimposition of introduced, spring-spawning rainbow trout,Oncorhynchus mykiss, on native, fall-spawning Dolly varden,Salvelinus malma, and white-spotted charr,S. leucomaenis, were examined in a small stream in Hokkaido, Japan. The stream reaches in which Dolly Varden and white-sported charr redds were observed in fall 1997 greatly overlapped with the reaches in which rainbow trout redds were recorded in spring 1998. Spawning microhabitats were also similar between trout and the two charr species. Thirteen and 3% of Dolly Varden and white-spotted charr redds, respectively, were superimposed by rainbow trout redds. The eggs or alevins in the disturbed charr redds were potentially damaged because charrs were not likely to have emerged from the redds before the superimposition occurred. In sufficiently great abundance, introduced rainbow trout may negatively impact native charr populations by dislodging the latter’s spawning redds.     

Retention of a chromosomal inversion from an anadromous ancestor provides the genetic basis for alternative freshwater ecotypes in rainbow trout

Migratory behaviour patterns in animals are controlled by a complex genetic architecture. Rainbow trout (Oncorhynchus mykiss) is a salmonid fish that spawns in streams but exhibits three primary life history pathways: stream‐resident (fluvial), lake‐migrant (adfluvial) and ocean‐migrant (anadromous). Previous studies examining fluvial and anadromous O. mykiss have identified several genes associated with life history divergence including the presence of an inversion complex within chromosome 5 (Omy05) that appears to maintain a suite of linked genes controlling migratory behaviour. However, adfluvial trout are migratory without being anadromous, and the genetic basis for this life history has not been investigated from evolutionary perspectives. We sampled wild, native nonanadromous rainbow trout occupying connected stream and lake habitats in a southwest Alaskan watershed to determine whether these fish exhibit genetic divergence between fluvial and adfluvial ecotypes, and whether that divergence parallels that documented in fluvial and anadromous O. mykiss. Data from restriction site‐associated DNA (RAD) sequencing revealed an association between frequencies of both the Omy05 inversion complex and other single nucleotide polymorphisms (SNPs) with habitat type (stream or lake), supporting the genetic divergence of fluvial and adfluvial individuals in sympatry. The presence of a genetic basis for migration into lakes, analogous to that documented for anadromy, indicates that the adfluvial ecotype must be recognized separately from the fluvial form of O. mykiss even though neither is anadromous. These results highlight the genetic architecture underlying migration and the importance of chromosomal inversions in promoting and sustaining intraspecific diversity.     

Polymorphisms in major histocompatibility complex class IIα genes are associated with resistance to infectious hematopoietic necrosis in rainbow trout,Oncorhynchus mykiss (Walbaum, 1792)

Infectious hematopoietic necrosis is a serious viral disease of salmonids, including rainbow trout Oncorhynchus mykiss, and causes tremendous economic losses to the rainbow trout farming industry. Major histocompatibility complex (MHC) genes are crucial elements of adaptive immunity in vertebrate organisms and have been linked with the resistance to numerous pathogenic diseases. In this study, polymerase chain reaction‐single strand conformation polymorphism (PCR‐SSCP) followed by cloning and sequencing were used to examine polymorphisms in the DAA genes (specifically DAA exon 2 of MHC class IIα) of rainbow trout and investigate their association with the infectious hematopoietic necrosis virus (IHNV) resistance in rainbow trout. Seventeen alleles were resolved, including 13 novel alleles. Individuals possessed between two and five alleles, indicating that the genome harbours at least three closely‐related DAA exon 2 loci. The ratio of non‐synonymous to synonymous nucleotide substitutions suggested that DAA exon 2 is under positive selection. A greater variability of amino acids and non‐synonymous nucleotide substitution rate was evident in the peptide‐binding region (PBR) than in the non‐PBR (27.75%). Importantly, the analyses revealed that certain MHC class IIα alleles appear to confer resistance to IHNV in rainbow trout, while others confer susceptibility. The most common alleles in the resistant populations of rainbow trout, Onmy‐DAA*1301 and Onmy‐DAA*0304, confer resistance to IHNV and were not present in the susceptible population. Hence, these alleles may be ideal molecular markers that can assist the breeding of IHNV resistance in rainbow trout.     

Consistency in Context-specific Measures of Shyness and Boldness in Rainbow Trout, Oncorhynchus mykiss

Shyness and boldness has been considered a fundamental axis of human behavioural variation. At the extreme ends of this behavioural continuum subjects vary from being bold and assertive to shy and timid. Analogous patterns of individual variation have been noted in a number of species including fish. There has been debate on the nature of this continuum as to whether it depends on context. That is, whether it is domain‐general (as in humans), or context‐specific. The purpose of our study was to test if shyness and boldness depends on context in rainbow trout, Oncorhynchus mykiss and to this end we estimated boldness in five different situations. Our data provide evidence of a shy–bold behavioural syndrome in rainbow trout. Bold trout tended to be bold in four situations when the context was similar (when the context concerned foraging). However, in a different context, exploring a swim flume, the ranking was entirely different. We suggest that shyness and boldness depends on context in rainbow trout.     

Life history and ecological characteristics of humper and lean ecotypes of lake trout stocked in Lake Erie

Through combined effects of over-exploitation and predation by invasive non-native sea lamprey Petromyzon marinus (Linneaus 1958), the lake trout Salvelinus namaycush (Walbaum 1972) population in Lake Erie collapsed and was considered extirpated by 1950; annual stocking occurred in 1969 to bolster and maintain this population as natural recruitment ceased. While various hatchery strains of lean ecotype lake trout remain the focus of Lake Erie’s stocking, between 2004 and 2011 a humper-like ecotype was stocked to aid re-establishment efforts. We assessed ecotype performance via adult fish collected during the summer-stratified period (2004–2017) and evaluated if life history and ecological characteristics varied between stocked ecotypes. Ecotype-specific differences in survival, length-at-age, accumulation of weight with length, and diet were observed. Lean lake trout grew faster (length-at-age) and matured at larger sizes than the humper ecotype. Humper lake trout exhibited higher sea lamprey wounding and lower survival rates than lean lake trout. Humpers also consumed more benthic prey fish than lean lake trout, suggesting this ecotype may exhibit a more benthic orientation than leans. Our study represents the first evaluation of how a non-lean ecotype lake trout performs outside their native ecosystem and provides fishery managers with valuable information relevant to re-establishing lake trout populations in the Great Lakes.

     

Effects of Simultaneous vs. Sequential Settlement on the Territorial Behaviour of Juvenile Rainbow Trout (Oncorhynchus mykiss)

The aggression hypothesis predicts that territories will be smaller and more numerous when individuals arrive simultaneously rather than sequentially, because of the prior residency effect, whereas the attraction hypothesis predicts the opposite. In this study, we test the predictions of these contrasting hypotheses by releasing 12 juvenile rainbow trout (Oncorhynchus mykiss) either simultaneously, all on 1 d, or sequentially, two per day for 6 d, in artificial streams. After the fish spent an average of 1 wk in the streams, we quantified the number of territories established, territory size, aggression rate and growth rate. There was evidence of a prior residency effect – early arrivers were more aggressive and grew faster than late arrivers – but this effect did not alter the number or size of territories established. We concluded that the temporal patterns of arrival have no strong effects on the territorial dynamics of juvenile rainbow trout.     

Behavioral plasticity in rainbow trout (Oncorhynchus mykiss) with divergent coping styles: when doves become hawks

Consistent and heritable individual differences in reaction to challenges, often referred to as stress coping styles, have been extensively documented in vertebrates. In fish, selection for divergent post-stress plasma cortisol levels in rainbow trout (Oncorhynchus mykiss) has yielded a low (LR) and a high responsive (HR) strain. A suite of behavioural traits is associated with this physiological difference, with LR (proactive) fish feeding more rapidly after transfer to a new environment and being socially dominant over HR (reactive) fish. Following transport from the UK to Norway, a switch in behavioural profile occurred in trout from the 3rd generation; HR fish regained feeding sooner than LR fish in a novel environment and became dominant in size-matched HR–LR pairs. One year after transport, HR fish still fed sooner, but no difference in social dominance was found. Among offspring of transported fish, no differences in feeding were observed, but as in pre-transported 3rd generation fish, HR fish lost fights for social dominance against size-matched LR opponents. Transported fish and their offspring retained their distinctive physiological profile throughout the study; HR fish showed consistently higher post-stress cortisol levels at all sampling points. Altered risk-taking and social dominance immediately after transport may be explained by the fact that HR fish lost more body mass during transport than did LR fish. These data demonstrate that some behavioural components of stress coping styles can be modified by experience, whereas behavioural plasticity is limited by genetic effects determining social position early in life story.