Molecular product formation in the electron radiolysis of water.

The time dependence of the formation of a molecular product in radiation chemistry is linked to the yield of the product formed in scavenging experiments by a Laplace transform relationship. Kinetic modeling with deterministic methods is used to show that such a relationship can be used to describe the molecular product (H2 and H2O2) formation following the fast-electron radiolysis of water and of aqueous solutions. Experimental yields are fitted using an appropriate empirical function, and the time dependence of the yields of the molecular products in the absence of a scavenger is derived using the Laplace relationship.     

OH radicals and oxidizing products in the gamma radiolysis of water

The production of OH radicals in the gamma radiolysis of water has been examined with radical scavenger techniques employing formic acid. OH radical yields were found to vary from 2.4 radicals/100 eV at the low scavenger concentration limit to 4.2 at a formic acid concentration of 3 M. An inverse Laplace transform technique was applied to the scavenger concentration dependence to obtain the temporal dependence of OH radicals in pure water. It was found that the relative decrease in OH radical yields from 200 ps to 3 ns was virtually the same for the transform of the scavenger data and the directly measured time-resolved results. The absolute yields for the time-resolved experiments are about 10% higher than expected from the present results with scavengers. The agreement can be considered to be good, and reasons for the observed difference are given. Approximately 40% of the OH radicals produced lead to the formation of hydrogen peroxide, which is the only other major oxidizing species in the gamma radiolysis of water. The net water decomposition for gamma rays was found to vary from an initial value of 5.6 +/- 0.3 molecules/100 eV to 3.8 +/- 0.2 molecules/100 eV at 1 micros.     

Interaction of radicals from water radiolysis with melanin

Melanins are considered to be natural photoprotectors in the melanocytes and keratinocytes of the skin. These pigments have also been suggested to play an important role in protection of melanin-containing cells against ionising radiation. Various mechanisms have been proposed to explain the protective role of melanin which invoke the radical scavenging properties of the polymer. In the present work the reactions of melanins with radicals generated in aqueous media by pulse radiolysis have been studied. Time-resolved changes in absorbance of the melanin or the radical species were recorded at selected wavelengths. Experiments were carried out on synthetic dopa- and 5-S-cysteinyldopa-melanins and a natural melanin in phosphate buffer (pH 7.4). Under the conditions employed, melanin reacted predominantly with either oxidising (OH., N3.) or reducing (eaq-, CO2-) species. We were also able to monitor the interaction of melanin with superoxide radical, which was reducing in this case. Detailed analysis of transient changes in melanin absorbance, detected at different wavelengths, was demonstrated to be a convenient method for studying redox processes of this substance, as shown by model experiments using ferricyanide and dithionite as oxidising and reducing agents, respectively. Among the radicals studied, OH. exhibited the strongest reactivity with melanins. Apparent rate constants for the reactions of radicals with autoxidative dopa-melanin (1.5 X 10(9) M-1 X s-1, 2.6 X 10(8) M-1 X s-1, 1.8 X 10(8) M-1 X s-1, 5 X 10(5) M-1 X s-1, 10(6)-10(7) M-1 X s-1 for OH., eaq-, N.3. O2- and CO2-, respectively) are reported. The reactivity of melanins with radicals from water radiolysis and their effect on pigment properties are discussed in terms of the structure and possible biological role of the pigments.     

Final products obtained from the gamma radiolysis of frozen aqueous solutions of thymidine.

The final radiation products obtained by gamma-irradiation of frozen aqueous solutions of thymidine have been identified as 5,6-dihydro-5,6-dihydroxythy-midine, 5,6-dihydrothymidine, thymidine dimers, 1-(2-deoxy-beta-D-threo-pento-furanosyl)-thymine, 1-(2-deoxy-alpha-L-threo-pentofuranosyl)-thymine, thymine and 5,6-dihydrothymine. The nature of the radiation products could be explained on the basis of the radical structures reported earlier.     

3-Hydroxyanthranilic acid metabolism. IV. Spectrophotometric evidence for the formation of an intermediate

Evidence has been presented for the formation of an intermediate compound in the metabolism of 3-hydroxyanthranilic acid to quinolinic acid by 3-hydroxyanthranilase from rat liver preparations. The production of the intermediate was demonstrated by spectrophotometric analyses and quinolinic acid measurements of incubation mixtures in which small amounts of acetone powder extracts of rat liver were used as the enzyme source. The calculated extinction coefficient of the compound was more than double that of the substrate or of the final product, quinolinic acid.The intermediate was shown to be an oxidation product of 3-hydroxyanthranilate as indicated by Thunberg experiments. The data obtained indicate that the intermediate may be a quinone-type compound.     

ESR spectroscopic evidence for hydration- and temperature-dependent spatial perturbations of a higher plant cell wall paramagnetic ion lattice

To study the influence of cell wall polyuronide structure on bound paramagnetic ion interactions, spin-spin coupling measurements were made on intact cell walls exchanged with a wide range fo Mn²⁺ and Cu²⁺ concentrations. These experiments were performed so that dimer-only intercationic nearest neighbor distances (d) and lattice constants (κ) could be calculated from the linewidth-concentration dependency. d values were estimated to be 12 and 14 Å for Cu²⁺ and Mn²⁺, respectively. At the maximal bound ion concentration, κ was 2.3–2.6, indicating that about 5–7 paramagnetic ion nearest neighbor spin-spin interactions occur per dipole in the nearly filled lattice. This latter observation strongly argues for the egg-box model of the cell wall-polyuronide lattice structure. Mn²⁺ linewidths of hydrated cell wall-bound paramagnetic ions displayed an unusual temperature dependency, whereby linewidths increased between 20°C and the temperature at which maximal linewidths were observed (T_max). T_max was inversely proportional to the degree of lattice hydration, indicating that the temperature dependency was not associated with the freezing of bound water. The relative change in Mn²⁺ linewidths, between 20°C and T_max, was affected by binding site-associated ¹H spin-lattice relaxation times, indicating that the temperature dependency is at least partially controlled by cell wall polyuronide structure.     

Computer simulation of ESR signals of liver paramagnetic centers

Changes of paramagnetic centres concentration characterized by g-factors values of 1.94, 2.2, and 2.03 in the rat liver were studied by ESR method under acute intoxication by diethylnitrosamine (DENA) and at preliminary threefold treatment of animals with butylhydroxytoluene (BHT). A protective effect of BHT can be explained by its stabilizing action of the membrane structures. A comparison has been carried out with a similar study of paramagnetic centres in the experiment of chronic intoxication by DENA. A simulation was performed of the liver tissue ESR spectra by means of special computer program. The parameters of simulated ESR spectra of the liver tissue with due regard for ESR signal g 2.03 corresponded to the parameters of the experimental spectra. Confirmations were obtained for the nature and number of paramagnetic centres in the liver tissue.     

Comparison of radiolysis products of thymine and thymidine with e.s.r. results.

Radicals determined by e.s.r. spectrometry of irradiated thymine or thymidine and radiolytic products generated under tha ction of gamma rays in aerated aqueous solutions have been compared. This comparison lies mainly in the fact that a radical R gives rapidly the corresponding peroxide ROOH. The authors have isolated and characterized twenty peroxides, i.e., the four isomers cis (-), cis (+), trans (-), trans(+) of 6-hydroperoxy-5-hydroxy-5,6-dihydrothymidine; the four isomers cis (-), cis (+), trans (-), trans (+) of 5-hydroperoxy-6-hydroxy-5,6-dihydrothymidine; 5-hydroperoxy-2-deoxyuridin;cis and trans 6-hydroperoxy-5-hydroxy-5,6-dihydrothymine; cis and trans 5-hydroperoxy-6-hydroxy-5,6-dihydrothymine; 5-hydroperoxymethyl-uracil; 5-hydroperoxy-5,6-dihydrothymine;cis and trans 6-hydroperoxy-5,6-dihydrothymine; 5-hydroperoxy-5-methyl barbituric acid; 5-hydroperoxy-5-methyl hydantoin; trans 5,6-dihydroperoxy-5,6-dihydrothymine. Most of thethymine and thymidine radicals hypothesized or described in the literature were correlated to these peroxides. However, the presence of certain peroxides could not be explained by recognized radicals. Taking advantage of this fact, the existence of new thymine or thymidine radicals so far unknown can be predicted.     

Water radiolysis products and nucleotide damage in gamma-irradiated DNA

The radiation chemistry of nucleotide damage introduction into DNA gamma-irradiated in dilute aqueous solution has been studied with a damage-specific DNA binding protein. Irradiation in air, N2 or N2O in the presence and absence of free radical scavengers revealed that protein-recognizable lesions were introduced both by the hydrated electron and by the combination of the hydroxyl radical and superoxide anion radical, but not by the hydroxyl radical alone. In addition, nucleotide damage was introduced into DNA by an enzymatic superoxide-generating system.     

Detection of fast light-activated H+ release and M intermediate formation from proteorhodopsin.

Background  

Proteorhodopsin (pR) is a light-activated proton pump homologous to bacteriorhodopsin and recently discovered in oceanic γ-proteobacteria. One perplexing difference between these two proteins is the absence in pR of homologues of bR residues Glu-194 and Glu-204. These two residues, along with Arg-82, have been implicated in light-activated fast H⁺ release to the extracellular medium in bR. It is therefore uncertain that pR carries out its physiological activity using a mechanism that is completely homologous to that of bR.     

FT-IR investigations on effect of high doses of gamma radiation-induced damage to polystyrene and mechanism of formation of radiolysis products

The present article focuses on the influence of gamma irradiation and post-irradiation storage conditions on FT-IR spectra of 1 mm thick polystyrene irradiated with 51, 77 and 129 kGy. The increase in amplitude corresponding to 3600, 3400 and 2100 cm^??1 stretching frequencies clearly showing the formation of O–H and C=O bonds (~?25%). On prolonged storage (2160 h) in the dark, there is an increase in O–H group (~?28%). The electron cloud facilitates the formation of hydroxyl group in irradiated polystyrene. The post-irradiation treatment with heat conversely showed a reduction of O–H, C–H and C=O (9–16%) groups due to radical–radical recombination at higher temperatures and light intensities. This investigation finds its applications in memory devices, optical sensors, radiation dosimetry and different space and radiation facilities.     

Pulse radiolysis,electron paramagnetic resonance spectroscopy and theoretical calculations of caffeic acid oligomer radicals

Seven representative compounds isolated from Salvia officinalis, among them caffeic acid, the dimer rosmarinic acid and oligomers of caffeic acid, were investigated with regard to their antioxidant potential both expressed by the radical scavenging activity and the stability and structure of the intermediate radicals. Pulse-radiolytic investigation revealed very high rate constants with both hydroxyl and azide radicals. Evidence from kinetic modelling calculations suggested unusual complex behavior due to the presence of both O(4)- and O(3)-semiquinones and - in two cases - formation and decay of a hydroxyl radical adduct at the vinyl side chain. EPR spectroscopy studies, which included dihydrocaffeic acid as a model for the saturated side chains of the oligomers, confirmed that the radical structures after oxidation in slightly alkaline solutions are representing dissociated O(4)-semiquinones. While according to calculations based on hybrid density-functional theory the other radical structures are valid intermediates, they cannot be observed except by pulse radiolysis due to their fast decay.     

The N-terminal domain of desmin is not involved in intermediate filament formation: evidence from thrombic digestion studies

Thrombic digestion of chicken gizzard desmin resulted in the cleavage of six arginyl bonds in the desmin molecule (at arginine residues 27, 33, 48, 59, 67 and 96), all of which are located in the N-terminal globular domain of the molecule. The large thrombic fragment (residues 97–463) of desmin isolated from this digest, which contains the central rod and C-terminal non-helical regions of desmin, was found to form filamentous structures indistinguishable from those of intact desmin. These results indicate that, in contrast to previous predictions, the N-terminal domain of desmin is not essential for intermediate filament formation.     

The mechanism of action of superoxide dismutase from pulse radiolysis and electron paramagnetic resonance. Evidence that only half the active sites function in catalysis

1. Detailed studies on the mechanism of the enzymic reaction of bovine superoxide dismutase were carried out by using pulse radiolysis and electron paramagnetic resonance (e.p.r.). 2. The second-order rate constant for reaction between superoxide dismutase and the superoxide ion was redetermined as (2.37+/-0.18)x10(9)m(-1).s(-1) at 25 degrees C. This reaction governs the turnover, and any first-order steps must have rate constants higher than about 10(6)s(-1). Turnover has a low activation energy and is slowed substantially when the viscosity is increased with glycerol, confirming that the reaction rate is near the limit for diffusion control. In water a reversible conformation change to a less active form appears to take place above about 40 degrees C. 3. Pre-steady-state rates of reduction and reoxidation of copper in the enzyme are consistent with these processes being rate-limiting in enzyme turnover. 4. Examination, with the help of computer simulation, of the e.p.r. spectra at 9 and 35GHz of native superoxide dismutase indicated that, apart from 10-20% of impurities, only one species of Cu(2+) is distinguishable. Further, the specific activity of our enzyme preparations, measured by pulse radiolysis, is at least as high as that obtained by other workers. 5. Nevertheless, measurement of the proportion of copper present as Cu(2+) (determined both optically and by e.p.r. spectroscopy) in the steady states approached from both the oxidized and the reduced forms of the enzyme, indicates (after allowing for the impurities) that only half of the copper atoms participate in turnover. E.p.r. spectroscopy provided no evidence for differences between functioning and non-functioning Cu(2+) atoms. 6. It is suggested that the results may be best interpreted in terms of an allosteric type of mechanism, with two initially indistinguishable copper atoms in the enzyme. Reaction of one of these with a superoxide ion then renders the other, at least transiently, unreactive.