Effects of stream size on taxa richness and other commonly used benthic bioassessment metrics

Benthic macroinvertebrate samples were collected from natural substrates in disturbed and undisturbed South Carolina upper coastal plain streams to determine if taxa richness and other bioassessment metrics were significantly related to stream size as predicted by the River Continuum Concept (RCC). Linear, quadratic, and lognormal regression models indicated that stream width was positively related to total number of taxa; number of Ephemeroptera, Plecoptera, and Trichoptera (EPT) taxa; and total number of organisms. Linear regression showed that the expected number of taxa at undisturbed sites ranged from 35 in 2.0 m wide streams to 64 in 16.0 m streams. Comparable values were 8–20 for EPT and 109–261 for number of organisms. Stream width was inversely related to biotic index values indicating a decrease in average organism tolerance with increasing stream size. ANCOVA showed that the effects of stream size were similar for disturbed and undisturbed sites. Rank correlations and multidimensional scaling (MDS) showed that Lepidoptera and Trichoptera were more abundant in larger streams and Annelida in smaller streams. Stream size related changes in benthic macroinvertebrate community composition are often ignored in bioassessment protocols; however, failure to adjust metrics for stream size can lead to erroneous conclusions. Adjustments are possible by analyzing regression residuals stripped of stream size related variance, dividing the area beneath the maximum taxa richness line into equal size units for metric scoring, or scaling metrics based on predicted reference values. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Factors Affecting Macroinvertebrate Richness and Diversity in Portuguese Streams: a Two‐Scale Analysis

We analysed the spatial patterns in macroinvertebrate taxon richness and abundance at two scales: sampling unit and basin. We sampled 12 stream sites in three zones of Portugal, differing in climate geomorphology and water chemistry. At a sampling unit scale, substratum organic matter content, depth and the dominant size of substratum particles were correlated with numbers of taxa and individuals. We propose that the number of taxa at a small scale depends on the number of individuals, which in turn is the result of organic matter accumulation, hydrologic and substratum characteristics. The environmental parameters better explaining the large‐scale biological data were temperature, minimum size of substratum particles and pH. Regardless of the relative importance of variable types and mechanisms regulating stream invertebrates along the climatic gradient, rivers from the North and Centre appeared to be richer in taxa than the typically Mediterranean streams in the South.     

Temporal changes of biodiversity in urban running waters – Results of a twelve-year monitoring study

Freshwater biodiversity underlies severe threats, mainly suffering from habitat degradation by anthropogenic land use, in particular by urbanisation. However, recent long-term studies indicate recovery of stream macroinvertebrate diversity due to improved water quality at least in North America and Europe. We monitored macroinverbrates at 56 urban stream sites over a 12-year period (2009–2020) in Braunschweig, a German urban district. We utilised these data to investigate spatio-temporal changes in taxon richness and assemblage structure as well as factors potentially affecting the resulting patterns. Overall taxon richness was increasing over the study period, comprising both all taxa and taxa being indicators for healthy stream conditions. 53.6% of the sites had significant positive trends becoming most eminent since 2014, despite decelerating since 2018, the beginning of an extra-ordinary dry period. Only 10.7% of the study sites had negative trends. Assemblage structure was shaped by environmental factors like stream width and water quality. Over-average taxon richness including positive trends and higher numbers of indicator taxa of healthy stream conditions was found in streams with higher flow velocity, good saprobic conditions and more natural streambed structure. In contrast, low taxon richness and predominance of tolerant taxa were found in streams with more degraded conditions. Most of the environmental conditions having positive effects on taxon richness were improved by various programs set up by the environmental authorities. We therefore conclude, if urban stressors like organic pollution and structural degradation can be mitigated by revitalisation and water quality improvement, urban streams can have good potential for increasing biodiversity and improving ecological functioning.     

An improved macroinvertebrate multimetric index for the assessment of wadeable streams in the neotropical savanna

Multimetric indices (MMIs) have been successfully used to assess ecological conditions in freshwater ecosystems worldwide, and provide an important management tool especially in countries where biological indicators are fostered by environmental regulations. Nonetheless, for the neotropics, the few published papers are limited to small local scales and lack standardized sampling protocols. To fill the gaps left by previous studies, we propose a stream MMI that reflects anthropogenic impacts by using macroinvertebrate assemblage metrics from a data set of 190 sites collected from four hydrologic units in the Paraná and São Francisco River Basins, southeastern Brazil. Sites were selected through use of a probabilistic survey design allowing us to infer ecological condition to the total of 9432 kilometers of wadeable streams in the target population in the four hydrologic units. We used a filtering process to determine the least- and most-disturbed sites based on their water quality, physical habitat structure, and land use. To develop the MMI, we followed a stepwise procedure to screen our initial set of biological metrics for influence of natural variation, responsiveness and discriminance to disturbances, sampling variability, and redundancy. The final MMI is the sum of 7 scaled assemblage metrics describing different aspects of macroinvertebrate assemblage characteristics: Ephemeroptera richness, % Gastropoda individuals, Shannon-Wiener diversity index, % sensitive taxa richness, % scraper individuals, temporarily attached taxa richness, and gill respiration taxa richness. The MMI clearly distinguished the least-disturbed sites from the most-disturbed sites and showed a significant negative response to anthropogenic stressors. Of the total length of wadeable streams in the study area, 38%, 35%, and 27% were classified by the MMI as being in good, fair, and poor condition, respectively. By reducing the subjectivity of site selection, rigorously selecting the set of reference sites, and following a standardized metric screening method, we developed a robust MMI to assess and monitor ecological condition in neotropical savanna streams. This improved MMI provides an effective ecological tool to guide decision makers and managers in developing and implementing improved, cost-effective environmental policies, regulations, and monitoring of those systems.     

Measurements of uncertainty in macrophyte metrics used to assess European lake water quality

Uncertainty is an important factor in ecological assessment, and has important implications for the ecological classification and management of lakes. However, our knowledge of the effects of uncertainty in the assessment of different ecological indicators is limited. Here, we used data from a standardized campaign of aquatic plant surveys, in 28 lakes from 10 European countries, to assess variation in macrophyte metrics across a set of nested spatial scales: countries, lakes, sampling stations, replicate transects, and replicate samples at two depth-zones. Metrics investigated in each transect included taxa richness, maximum depth of colonisation and two indicators of trophic status: Ellenberg’s N and a metric based on phosphorus trophic status. Metrics were found to have a slightly stronger relationship to pressures when they were calculated on abundance data compared to presence/absence data. Eutrophication metrics based on helophytes were found not to be useful in assessing the effects of nutrient pressure. These metrics were also found to vary with the depth of sampling, with shallower taxa representing higher trophic status. This study demonstrates the complex spatial variability in macrophyte communities, the effect of this variability on the metrics, and the implications to water managers, especially in relation to survey design.     

The Influence of Physical Habitat,Pyrethroids, and Metals on Benthic Community Condition in an Urban and Residential Stream in California

This study was designed to characterize benthic communities and physical habitat in both an urban (Kirker Creek) and residential (Pleasant Grove Creek) stream in California in late spring of 2006 and 2007. Concurrent water quality evaluations, physical sediment parameters, pyrethroids, bulk metals, and SEM/AVS ratios were also measured during both years of this study. The relationship of various benthic metrics to physical habitat metrics, pyrethroids, and metals was evaluated for each stream using stepwise multiple linear regressions with both years combined for each stream, as well as both years and both streams combined, to increase the statistical power for determining significant relationships. Physical habitat was determined to be poor in each stream during both years of sampling. More than 100 benthic taxa were reported annually for both streams based on 2006 and 2007 sampling. A significant result from the stepwise regression analysis combining data for 2 years across both streams is that when habitat metrics and to a lesser degree metals are considered in the statistical models pyrethroids do not display any significant relationships to the benthic metrics. In summary, it is apparent from this analysis that the health of benthic communities in both streams is primarily affected by habitat metrics.     

Patterns of assemblage change in prairie stream fishes in relation to urban stormwater impoundments

The effects of stream urbanization on fishes have been well studied in general. Yet despite the wealth of knowledge available for streams in many different ecoregions, relatively little is known of the effects of urbanization on prairie stream fishes. Management of urban stormwater through impoundment has the potential to fragment streams, and habitat fragmentation on nonurban streams has been documented to relate to declines in small-bodied mobile minnow species. We asked whether urban habitat fragmentation through stormwater impoundment would relate to a similar decline in small-bodied fishes in Cottonwood Creek, a stream system partially managed by stormwater impoundment in central Oklahoma. Analyses with basic metrics of ecological tolerance, richness, community structure, and multivariate ordination found negative relationships between cyprinid richness and abundance and a metric of urban habitat fragmentation, as well as between Lepomis humilis, a small-bodied sunfish, and the metric of urban habitat fragmentation. We review potential hypotheses for these biological patterns in fragmented urban streams, including predation, lack of successful reproduction, and lack of ability to recolonize above barriers.     

Assessment of Stream Restoration: Sources of Variation in Macroinvertebrate Recovery throughout an 11‐Year Study of Coal Mine Drainage Treatment

Stream restoration researchers have a complex array of alternative assessment methodologies using macroinvertebrates. We examined sources of variation among three field sampling methods and five metrics in three networked streams impacted by a circumneutral coal mine discharge treated midway through an 11‐year study. Constructed wetlands captured the primary stressor, 700 kg iron/day. Before pollution abatement, copious iron hydroxide smothered downstream sites for decades. Two second‐order streams and one fourth‐order receiving stream, each with matching locations upstream and downstream, were monitored midsummer from 1994 to 2004. We compared taxa density (TD) (number/sample), abundance, expected taxa richness (ETR), U.S. regional pollution tolerance values (RTV), and community similarity (CS) indices from 3 to 11 replicate samples/site using grab samples (i.e. D‐nets, rock washes) and incubated leaf packs. Variation due to sampling method, metric, location, and year significantly influenced outcomes when analyzed using regression and analysis of variance. TD, RTV, and CS indicated biological recovery lagged 6 years behind chemical improvement; ETR and abundance showed more severe, persistent impairment in the two, highly impacted second‐order streams compared to the fourth‐order stream. Incubated leaf packs offered a preview of stream recovery in downstream sites, providing clean food (leaves) and substrate (mesh) and attracted more taxa and abundance than grab samples. In light of the worldwide distribution of coal mining often accompanied by metal hydroxide deposits into streams, we suggest restoration project managers use a variety of sampling methods, metrics, and models to evaluate remediation of physical as well as chemical impairment from mining.     

Biotelemetry of crustacean decapods: sampling design,statistical analysis,and interpretation of data

Lotic systems in many regions of the country have experienced habitat degradation and biodiversity loss due to agricultural activity and urbanization. Southeastern Michigan is no exception, as agriculture in the River Raisin watershed and increased urbanization in the Huron River watershed threatens both systems. To further understand the ecological impact of land use on trophic interactions in Midwestern streams and assess the use of a selected set of weighted, quantitative food web metrics as a tool for investigating the influence of anthropogenic disturbance on these systems we compared summer food webs for nine second-order streams. All streams were categorized as developed, undeveloped, or agricultural based on land cover data. Developed and undeveloped streams were located in the Huron River watershed and agricultural streams were located in the River Raisin watershed. Reach-level habitat quality was also assessed at each study site using the EPA’s Rapid Habitat Assessment. Fish diets (n = 410) were analyzed to create summer food webs for each site. Comparisons of food webs were made using a suite of weighted, quantitative metrics to identify differences in fish–macroinvertebrate interactions across streams with differing land cover at the sub-basin scale and habitat quality at the local scale. Although undeveloped streams had higher species richness and less habitat degradation, no significant patterns were observed in the quantitative metrics across the three stream categories or based on reach-level habitat conditions. Decapoda, terrestrial Hymenoptera, and Chironomidae were the primary prey taxa in all stream categories. Decapods accounted for the majority of biomass consumed and the pattern of this consumption strongly influenced metric scores. The suite of quantitative metrics tested in this study did not detect significant differences in fish–macroinvertebrate food webs across land use categories, likely in part due to the dominance of a large, tolerant prey taxa in fish diets, regardless of land use and local habitat quality.     

Multi-scale analysis of responses of stream macrobenthos to forestry activities and environmental context

1. Forestry activities can greatly modify the structure and function of invertebrate communities in streams, but the ability to detect effects of forestry may depend on the spatial scale considered, the choice of response metric and the environmental context. In this study, a multi‐scale, multi‐metric approach was used to compare the usefulness of proximate and larger‐scale measurements of forestry activity for understanding the impacts of forestry on stream macrobenthos. 2. Site‐specific responses of macrobenthic communities to forestry activities measured at four spatial scales (sub‐basin and 8‐, 2‐ and 0.5‐km radii upstream of study sites) were examined for 90 riffle sites distributed among 22 tributary streams (Strahler order 1–5) of the Cascapedia River basin, Quebec, Canada. 3. Multiple regression models and canonical correspondence analysis were used to relate six biological metrics (taxonomic richness, numerical density, biomass density, normalised biomass spectrum, individual body mass and community structure) to variables quantifying logging 1–19 years prior to the study and road density. Environmental predictors (variables quantifying local habitat or landscape features) were included in all analyses to statistically account for environmental context and increase the likelihood of detecting potentially subtle forestry impacts. 4. Forestry activities measured at the larger (sub‐basin and 8 km) scales were linked to decline in taxonomic richness, increase in numerical and biomass densities and shift in size structure of benthic macroinvertebrates, indicating that analyses encompassing larger areas, up to the full basin, may allow for more sensitive detection of effects than those of more limited span. 5. These responses primarily reflected marked increases in the abundance of chironomids and decline in the number of trichopteran taxa with increasing areal coverage of recent (≤2–4 years) cuts, suggesting that larger, longer‐lived and possibly more specialised taxa were more vulnerable to forestry impacts than smaller, multivoltine, generalist invertebrates. After partialling out the influence of other variables, rapid decline in richness occurred even when <1% of the basin had been clear cut in the year prior to the study. 6. Effects of forestry were detected after statistically accounting for natural environmental variability, which may have otherwise concealed those effects. The combined use of multiple biological metrics, partialling out of environmental effects and measurement of impacts at multiple spatial scales may be a broadly applicable approach for enhancing sensitivity and facilitating interpretation in studies of anthropogenic effects on macroinvertebrate communities.     

Biogeography,ecoregions, and geomorphology affect fish species composition in streams of eastern Oklahoma,USA

Stream fish assemblages are structured by biogeographical, physical and biological factors acting on different spatial scales. We determined how physical factors, geomorphology and stream habitat, influenced fish species composition (presence–absence) in eastern Oklahoma, USA relative to the ecoregion and biogeographic effects previously reported. We sampled fish assemblages and surveyed geomorphology and habitat at 107 stream sites in the Boston Mountains, Ouachita Mountains, and Ozark Highlands ecoregions in eastern Oklahoma. Partial canonical correspondence analyses (pCCAs) and variance partitioning showed that patterns of endemism related to drainage basins and ecoregions explained important variation in fish species composition in all streams, but stream size and local channel morphology explained more variation overall. Stream size effects were most important in explaining variability in fish species composition in both northeastern and southeastern Oklahoma streams. Local channel morphology and substrate characteristics were secondarily important. Variables typically considered important as fish habitat (aquatic vegetation, etc.) had little effect on fish species composition.     

Use of invertebrate traits for the biomonitoring of European large rivers: the effects of sampling effort on genus richness and functional diversity

1. Studies on biodiversity and ecosystem function require considering metrics for accurately describing the functional diversity of communities. The number of taxa (richness) is commonly used to characterise biological diversity. The disadvantage of richness as a measure of biological diversity is that all taxa are taken into account on an equal basis regardless of their abundance, their biological characteristics or their function in the ecosystem. 2. To circumvent this problem, we applied a recently described measure of biological diversity that incorporates dissimilarities among taxa. Dissimilarities were defined from biological traits (e.g. life history, morphology, physiology and behaviour) of stream invertebrate taxa and the resulting biological diversity index was considered as a surrogate for functional diversity. 3. As sampling effort is known to affect the number of taxa collected within a reach, we investigated how change in functional diversity is affected by sampling effort. We used stream invertebrate community data from three large European rivers to model accumulation curves and to assess the number of samples required to estimate (i.e. closeness to the maximal value) functional diversity and genera richness. We further evaluated the precision of estimates (i.e. similarity of temporal or spatial replicates) of the total functional diversity. 4. As expected, richness estimates were strongly dependent on sampling effort, and 10 replicate samples were found to underestimate actual richness. Moreover, richness estimates showed much variation with season and location. In contrast, functional diversity had greater accuracy with less sampling effort and the precision of the estimates was higher than richness both across sampling occasions and sampling reaches. These results are further arguments towards conducting research on the design of a biomonitoring tool based on biological traits.     

Effects of substratum stability on diversity of stream invertebrates during baseflow at two spatial scales

1. The effects of substratum stability on the diversity of stream invertebrates were assessed at two spatial scales in a Japanese stream during baseflow, from May to June 1998. Deposition and erosion were examined separately as distinct elements of substratum stability by a newly developed method using small steel pins. Stream invertebrates were sampled after 28 days of measurement of substratum stability. We also measured physical environmental variables, current velocity and depth, and food resource parameters including periphyton and particulate organic matter (POM) standing crops.
2. At the scale of the habitat patch, the effects of substratum stability on invertebrates were overwhelmed by those of POM standing crop. Moreover, higher taxon richness at high abundance may simply result from a higher likelihood of more taxa being included in samples. Therefore, this small scale revealed no role for substratum stability in explaining spatial pattern of community diversity.
3. At the reach scale ( n =10), taxon richness and evenness peaked at an intermediate level of deposition, whereas invertebrate abundance did not show any significant relationship. This result, and the pattern of relative abundance of common taxa, implies that the diversity of stream invertebrates was determined by subtle substratum movements and by the habitat preference of each taxon.
4. The difference in the determinant of community parameters between the habitat patch and the reach affirm the importance of a cross-scale analysis to choose an appropriate spatial scale for investigating the community structure of stream invertebrates. Prominent effects of substratum stability, particularly the deposition of substratum particles, during baseflow suggest that subtle and constant movement of small substratum particles can contribute to determine the diversity of stream invertebrates.     

Relative influence of variables at multiple spatial scales on stream macroinvertebrates in the Northern Lakes and Forest ecoregion, U.S.A.

• 1 We used 94 sites within the Northern Lakes and Forests ecoregion spanning Minnesota, Wisconsin and Michigan to identify environmental variables at the catchment, reach and riparian scales that influence stream macroinvertebrates. Redundancy analyses (RDA) found significantly influential variables within each scale and compared their relative importance in structuring macroinvertebrate assemblages.
• 2 Environmental variables included landcover, geology and groundwater delivery estimates at the catchment scale, water chemistry, channel morphology and stream habitat at the reach scale, and landcover influences at three distances perpendicular to the stream at the riparian scale. Macroinvertebrate responses were characterised with 22 assemblage attributes, and the relative abundance and presence/absence of 66 taxa.
• 3 Each scale defined macroinvertebrates along an erosional to depositional gradient. Wisconsin's macroinvertebrate index of biotic integrity, Ephemeroptera–Plecoptera–Trichoptera taxa and erosional taxa corresponded with forest streams, whereas organic pollution tolerant, Chironomidae and depositional taxa corresponded with wetland streams. Reach scale analyses defined the gradient similarly as dissolved oxygen and wide, shallow channels (erosional) opposed instream macrophytes and pool habitats (depositional). Riparian forests within 30 m of the stream coincided with an erosional assemblage and biotic integrity.
• 4 Next, we combined all significant environmental variables across scales to compare the relative influence of each spatial scale on macroinvertebrates. Partial RDA procedures described how much of the explained variance was attributable to each spatial scale and each interrelated scale combination.
• 5 Our results appeared consistent with the concept of hierarchical functioning of scale in which large‐scale variables restrict the potential for macroinvertebrate traits or taxa at smaller spatial scales. Catchment and reach variables were equally influential in defining assemblage attributes, whereas the reach scale was more influential in determining relative abundance and presence/absence.
• 6 Ultimately, comprehending the relative influence of catchment and reach scale properties in structuring stream biota will assist prioritising the scale at which to rehabilitate, manage and derive policies for stream ecosystem integrity.

     

Association of macroinvertebrate assemblages with dissolved oxygen concentration and wood surface area in selected subtropical streams of the southeastern USA

Woody debris (CWD) is an important habitat component in northern Gulf of Mexico coastal plain streams, where low gradients and low flows allow accumulation of CWD and promote low dissolved oxygen (DO) concentrations. We tested the influences of CWD and DO on stream macroinvertebrates experimentally by placing two surface area CWD treatments each in three concentrations of ambient DO in two streams in Louisiana, USA, with macroinvertebrates collected from ambient woody debris used as a control. We also sampled macroinvertebrates in benthic and woody debris habitats in three streams twice yearly over 2 years to examine the applicability of the experimental results. Total abundance, richness (generic), and Shannon–Wiener diversity were all higher in lower DO conditions during the experiment, and total abundance was higher in the larger CWD treatment. Stream sampling corroborated the relationship between higher diversity and low DO in both benthic and woody debris habitats, but the relationship between richness and low DO only was supported in benthic habitats. Few taxa correlated with DO or CWD in the experiment (5 of 21 taxa) or stream survey (2 of 54 taxa). Whereas most taxa were uncorrelated with experimentally manipulated and in-stream measured variables, we suggest these taxa respond as generalists to stream habitat and physicochemistry. Based on this experiment and stream sampling, we believe the majority of macroinvertebrates in these streams are tolerant of seasonally low DO conditions.     

Impacts of urbanization on stream habitats and macroinvertebrate communities in the tributaries of Qiangtang River,China

The impacts of watershed urbanization on streams have been studied worldwide, but are rare in China. We examined relationships among watershed land uses and stream physicochemical and biological attributes, impacts of urbanization on overall stream conditions, and the response pattern of macroinvertebrate assemblage metrics to the percent of impervious area (PIA) of watersheds in the middle section of the Qiantang River, Zhejiang Province, China. Environmental variables and benthic macroinvertebrates of 60 stream sites with varied levels of watershed urban land use were sampled in April, 2010. Spearman correlation analysis showed watershed urbanization levels significantly correlated with increased stream depth, width, and values of conductivity, total nitrogen, ammonia, phosphate, calcium, magnesium, and chemical oxygen demand for the study streams. There was significant difference in total taxa richness, Empheroptera, Plecoptera, and Trichoptera (EPT) taxa richness, and Diptera taxa richness, percentages of individual abundances of EPT, Chironomidae, shredders, filterers, and scrapers, and Shannon–Wiener diversity index between reference streams and urban impacted streams. In contrast, percentages of individual abundances for collectors, oligochaeta, and tolerant taxa, and biotic index were significantly higher in urban impacted than reference streams. All the above metrics were significantly correlated with PIA. The response patterns of total taxa richness, EPT taxa richness, and Shannon–Wiener diversity index followed a drastic decrease at thresholds of 3.6, 3.7, and 5.5% of PIA, respectively. Our findings indicate that stream benthic macroinvertebrate metrics are effective indicators of impacts of watershed urban development, and the PIA-imperviousness thresholds we identified could potentially be used for setting benchmarks for watershed development planning and for prioritizing high valued stream systems for protection and rehabilitation.     

Phylogenetic community structure metrics and null models: a review with new methods and software

Competitive exclusion and habitat filtering influence community assembly, but ecologists and evolutionary biologists have not reached consensus on how to quantify patterns that would reveal the action of these processes. Currently, at least 22 α‐diversity and 10 β‐diversity metrics of community phylogenetic structure can be combined with nine null models (eight for β‐diversity metrics), providing 278 potentially distinct approaches to test for phylogenetic clustering and overdispersion. Selecting the appropriate approach for a study is daunting. First, we describe similarities among metrics and null models across variance in phylogeny size and shape, species abundance, and species richness. Second, we develop spatially explicit, individual‐based simulations of neutral, competitive exclusion, or habitat filtering community assembly, and quantify the performance (type I and II error rates) of all 278 metric and null model combinations against each assembly process. Many α‐diversity metrics and null models are at least functionally equivalent, reducing the number of truly unique metrics to 12 and the number of unique metric + null model combinations to 72. An even smaller subset of metric and null model combinations showed robust statistical performance. For α‐diversity metrics, phylogenetic diversity and mean nearest taxon distance were best able to detect habitat filtering, while mean pairwise phylogenetic distance‐based metrics were best able to detect competitive exclusion. Overall, β‐diversity metrics tended to have greater power to detect habitat filtering and competitive exclusion than α‐diversity metrics, but had higher type 1 error in some cases. Across both α‐ and β‐diversity metrics, null model selection affected type I error rates more than metric selection. A null model that maintained species richness, and approximately maintained species occurrence frequency and abundance across sites, exhibited low type I and II error rates. This regional null model simulates neutral dispersal of individuals into local communities by sampling from a regional species pool. We introduce a flexible new R package, metricTester, to facilitate robust analyses of method performance.     

Benthic macrofauna in Tasmanian estuaries: scales of distribution and relationships with environmental variables

Information on the distribution of species richness, faunal density, biomass and estimated productivity of benthic invertebrates in Tasmanian estuaries was quantified at a variety of spatial and temporal scales to assess general hypothesis relating community metrics to such environmental variables as salinity, seagrass biomass and sediment particle size. An associated aim was to assess appropriate scales of investigation for soft-sediment biota distributed in estuaries, including whether patterns identified at individual sites, estuaries, tidal levels or times are likely to have more general relevance. Faunal biomass and productivity varied principally at between-estuary (10 to 1000 km) and replicate-sample (1 m) scales, indicating that these two community metrics were largely responding to estuary-wide effects, such as nutrient loading, and to microhabitat features, rather than to locality characteristics at intermediate scales such as salinity, anoxia or sediment particle size. By contrast, faunal density showed greater response to tidal height (1 to 100 m) and to factors distributed at the locality scale within estuary (10 km) than to factors between estuary. Both faunal density and species richness in estuaries declined over three- and fivefold ranges down the shore from high water mark to the shallow sublittoral, while estimated productivity and biomass showed highest overall levels at low water mark. The greatest component of variance in species richness was associated with tidal height, with variance then distributed approximately evenly between other spatial scales examined. At the low-tide and shallow subtidal levels, species richness, faunal biomass and estimated productivity were all highly correlated with salinity and biomass of macrophytes, whereas faunal density was highly correlated with biomass of macrophytes only. Relationships between environmental and biological variables examined were poorly defined at high tidal levels. Seasonal plus interannual variance was much lower than spatial variance—a clear indication that sampling effort in studies would generally be better directed across a range of localities than for a single locality to be repeatedly investigated over time.     

Refining a kick sampling strategy for the bioassessment of benthic macroinvertebrates in headwater streams

Small headwater streams constitute a large proportion of the river channel network in many parts of the world. In this study, two multihabitat kick sampling methods (60-second and 20-second) were compared across 10 small headwater streams in the southwest and east of Ireland in spring and summer 2009 to determine the influence of sampling on various benthic macroinvertebrates in headwater streams. The performance of each method, over time and replication, was examined using a range of benthic macroinvertebrate metrics, as well as the community composition and structure recorded by both methods. The ability to recruit taxa, as well as the field sampling and laboratory processing effort required for each method, was also assessed. Results indicated that both kick sampling methods generally recorded similar metric scores with the exception of taxonomic richness (t = 180 s and n = 9 replicates test) where the 20-second kicks consistently out preformed those calculated for the 60-second kicks. All other metrics compared generally performed equally as well regardless of the method used. Multivariate analysis of macroinvertebrate community assemblage, using SIMPROF, RELATE and CS-SMC analyses, further highlighted the high similarity in the macroinvertebrate assemblage recorded between both methods. Finally, the 20-second kicks recruited taxa as efficiently as 60-second kicks samples so long as replication was equal but required less sampling effort (NSE) and processing time. Therefore, the shorter 20-second kicks can be used to assess the ecological health of headwater streams, provided that adequate replication is adopted, resulting in significant effort, cost and time savings.