PHYLOGENY OF THE ULVOPHYCEAE (CHLOROPHYTA): CLADISTIC ANALYSIS OF NUCLEAR-ENCODED rRNA SEQUENCE DATA1

Cladistic analysis of nuclear-encoded rRNA sequence data provided us with the basis for some new hypotheses of relationships within the green algal class Ulvophyceae. The orders Ulotrichales and Ulvales are separated from the clade formed by the remaining orders of siphonous and siphonocladous Ulvophyceae (Caulerpales, Siphonocladales /Cladophorales [S/C] complex, and the Dasycladales), by the Chlorophyceae and Pleurastrophyceae. Our results suggest that the Ulvophyceae is not a monophyletic group. Examination of inter- and intra-ordinal relationships within the siphonous and siphonocladous ulvophycean algae revealed that Cladophora, Chaetomorpha, Anadyomene, Microdictyon, Cladophoropsis and Dictyosphaeria form a clade. Thus the hypothesis, based on ultrastructural features, that the Siphonocladales and Cladophorales are closely related is supported. Also, the Caulerpales is a monophyletic group with two lineages; Caulerpa, Halimeda, and Udotea comprise one, and Bryopsis and Codium comprise the other. The Dasycladales (Cymopolia and Batophora) also forms a clade, but this clade is not inferred to be the sister group to the S/C complex as has been proposed. Instead, it is either the sister taxon to the Caulerpales or basal to the Caulerpales and S/C clade The Trentepohliales is also included at the base of the siphonous and siphonocladous ulvophycean clade. The Pleurastrophyceae, which, like the Ulvophyceae, posses a counter-clockwise arrangement of flagellar basal bodies, are more closely related to the Chlorophyceae than to the Ulvophyceae based on rRNA sequences. Thus, the arrangement of basal bodies does not diagnose a monophyletic group. Previously reported hypotheses of phylogenetic relationships of ulvophycean algae were tested. In each case, additional evolutionary steps were required to obtain the proposed relationships. Relationships of ulvophycean algae to other classes of green algae are discussed.     

PHYLOGENETIC DISTRIBUTION OF THE MAJOR DIATOM LIGHT-HARVESTING PIGMENT-PROTEIN DETERMINED BY IMMUNOLOGICAL METHODS 1

Monospecific, polyclonal antibodies raised against the apoprotein of the major light-harvesting pigment-protein of Phaeodactylum tricornutum Bohlin UTEX 646 were used to determine (1) whether this complex was common to the class Bacillariophyceae, whose members contain chlorophylls a and c and fucoxanlhin; (2) whether antigenically-related apoproteins were present in other chlorophyll c-containing groups, and (3) whether there was immunological homology with the light-hanvsting chlorophyll a/b protein of similar photosynthetic function in the Chlorophyta and vascular plants. We have used protein blotting techniques to show that antibodies against the two P. tricornutum light-harvesting complex polypeptides cross-reacted with one or two polypeptides of similar molecular weight (17–21 kD) in all ten diatom species examined, representing two orders and six families. No cross-reactivity was obtained with total membrane polypeptides from isolated representatives of three chromophyte algal divisions (Chrysophyta, Cryptophyta, Pyrrophyta), all of which contained chlorophyll c. No cross-reactivity was observed with membrane Polypeptides isolated from members of two classes of Chlorophte algae. These data suggest that the Bacillariophyceae may be monophyletic, and that the primary structure of the diatom light-harvesting complex is not closely related to pigment-protein complexes with similar function in other chlorophyll c-containing unicellular algal groups. Lastly, it may be possible to use the antibodies to the diatom light-harvesting polypeptides as specific markers for diatoms in natural phytoplankton assemblages.     

ISOLATION AND CHARACTERIZATION OF NATIVE PIGMENT-PROTEIN COMPLEXES FROM TWO EUSTIGMATOPHYCEAE1

Pigment-protein complexes were isolated from two species of Eustigmatophyceae, Monodus subterraneus Peterson and Vischeria punctata Vischer, by digitonin treatment followed by density gradient centrifugation. Absorption and fluorescence spectra of the samples were monitored at various steps of preparation, and pigment composition was analyzed by reverse phase HPLC. Although the fluorescence emission spectra were very different in the two species, the absorption spectra were similar, and each exhibited an absorption band with a maximum at 487 nm attributable to violaxanthin and vaucheriaxanthin ester (the molar concentration of these pigments in Monodus was, respectively, 28 and 10 per 100 Chl a). The light-harvesting role of these xanthophylls was ascertained by fluorescence excitation spectra. The light-harvesting fractions (LH) collected in the upper part of the gradient were depleted in β-carotene, whereas their xanthophyll/chlorophyll ratio was almost the same as in whole cells. This is consistent with the presence in these algae of large LH antennae and relatively small core antennae in the photosystems. In Monodus, a polypeptide of 23 kDa, immunologically related to the major LH polypeptide of brown algae, constituted the majority of the LH protein moiety.     

PIGMENT COMPOSITION OF THE SCALY GREEN FLAGELLATE MESOSTIGMA VIRIDE (MICROMONADOPHYCEAE) IS SIMILAR TO THAT OF THE SIPHONOUS GREEN ALGA BRYOPIS PLUMOSA (ULVOPHYCEAE)1

Pigments were isolated from Mesostigma viride Lauterborn by reversed-phase high-performance liquid chromatography and compared to standards from Chlamydomonas reinhardtii Dang. and Bryopsis plumose (Huds.) Ag. M. viride possesses chlorophylls a and b, α and β-carotenes, and the xanthophylls siphonaxanthis, siphonein, neoxanthin, violaxanthin and echinenone. In addition, three unidentified xanthophylla were detected. Neither lutein nor zeaxanthin were detected. The pigment composition of M. viride was similar to that of B. plumosa which had chlorophylls a and b, ?- and α-carotenes, siphonaxanthin, siphonein, neoxanthin, violaxanthin, and two of the unidentified xanthophylls found in M. viride. The similarities in the pigments of Mesostigma and Bryopsis and other characters suggest that Mesostigma may be related to a flagellate ancestor of the Ulvophyceae.     

CHARACTERIZATION OF THE LIGHT-HARVESTING COMPLEX OF GIRAUDYOPSIS STELLIFER (CHRYSOPHYCEAE) AND EFFECTS OF LIGHT STRESS1

The light-harvesting complex (LHC) of Giraudyopsis stellifer Dangeard was isolated on a sucrose density gradient after digitonin treatment, and the pigment composition was analyzed by reverse-phase high-pressure liquid chromatography. The LHC is a chlorophyll (Chl) a/c/ fucoxanthin/violaxanthin complex, depleted of β-carotene, comparable to the LHC of Fucophyceae. The excitation transfer from Chl c and fucoxanthin to Chl a is efficient in whole cells. Immunological reactions indicate a close relationship between Chrysophyceae and Fucophyceae. The immunocytochemical labeling confirms the lack of segregation of the LHC in the appressed membranes of the three associated thylakoids and its localization in the intrapyrenoid thylakoid. The violaxanthin-antheraxanthin-zeaxanthin cycle is operative in the cells and efficiently protects photosystem II reaction centers against photoinhibition.     

FLAGELLAR APPARATUS OF THE BIFLAGELLATE ZOOSPORES OF THE ENIGMATIC MARINE GREEN ALGA BLASTOPHYSA RHIZOPUS1

The flagellar apparatus of the biflagellate zoospores from Blastophysa rhizopus Reinke has 180° rotational symmetry of the major components and counterclockwise absolute orientation. The basal bodies are connected anteriorly by a prominent striated distal fiber and posteriorly by two proximal striated bands. The C microtubules in the basal bodies terminate proximal to the transition region. Terminal caps and well-defined proximal sheaths are absent. The four microtubular rootlets diverge at a very small angle from the basal bodies. Six to eight (usually seven) microtubules are present in the s rootlets and two microtubules in the d rootlets. Rootlet 1s is associated with the eyespot. Each d rootlet is subtended by a coarsely striated fiber. Rootlet Id also has a finely striated fiber, roughly opposite the coarsely striated fiber, associated with it. Rhizoplasts and mating structures were not observed. Ultrastructural features of B. rhizopus zoospores are essentially identical with those found in examined members of the Siphonocladales sensu lato (= Siphonocladadales/Cladophorales complex) and Dasycladales, and have relatively few features in common with motile cells of caulerpalean algae. Blastophysa rhizopus probably does not represent an intermediate between the Siphonocladadales and the Caulerpales. Its evolutionary history is different from that of other algae placed in the siphonocladalean family Chaetosiphonaceae. Whether or not Blastophysa is representative of the ancestor to the Siphonodadales and Dasycladales is unclear.     

ABSOLUTE CONFIGURATION OF THE FLAGELLAR APPARATUS OF BIFLAGELLATE ZOOSPORES OF ENTEROMORPHA FLEXUOSA SSP. PILIFERA (ULVOPHYCEAE,CHLOROPHYTA)1

The absolute configuration of the flagellar apparatus of biflagellate zoospores of Enteromorpha flexuosa (Wulfen ex Roth.) J. Agardh ssp. pilifera (Kütz.) Bliding was determined. Viewed from the anterior of the cell, the flagellar apparatus shows 180° rotational symmetry with a counter-clockwise absolute orientation of its components. In longitudinal sections, the posteriorly directed basal bodies form an angle of about 170°–180° to one another. A reduced striated distal fiber connects the two basal bodies. The cruciate microtubular rootlet system has a 4–2–4–2 alternation pattern. Striated microtubule-associated components (SMACs or system I-fibers) and rhizoplasts (or system II fibers) accompany the two-membered rootlets. Striated bands connect the proximal sheaths with the four-Membered rootlets. The bilobate terminal caps do not completely cover the proximal ends of the basal bodies. This is the first ultrastructural study of biflagellate zoospores in a member of the Ulvales.     

SYSTEMATICS OF PRASIOLA AND PHYLOGENETIC POSITIONING OF THE PRASIOLALES (CHLOROPHYTA)

Sellman, S. M., Johansen, J. R. & Coburn, M. M. Department of Biology, John Carroll University, University Heights, OH 44118 USA The diatom composition of natural substrates at a single site were compared with that of the gut contents of three species of fish: stoneroller minnows, bluntnose minnows, and common shiners. Seven samples of each type were collected on a single day from a single pool in a headwater stream. Cluster analysis showed that diatom species composition clustered by fish species, with common shiners being a totally exclusive cluster, while natural substrates were scattered within the stoneroller and bluntnose clusters. Both richness and Shannon diversity were higher in fish gut samples than in the samples collected by humans, with stonerollers having the greatest diversity. When water quality indices calculated from the diatom floras recovered in these samples were compared, it was surprising to see that these indices consistently were better in fish gut samples than in samples collected by researchers. Common shiners particularly differed, a result possibly due to the fact that they apparently fed off of Cladophora and the highly oxygenated rock wall where the stream cascaded into the pool. In no case was the difference between stonerollers and natural substrates significantly different. Furthermore, samples from natural substrates had an internal similarity not significantly different from their similarity to samples in stoneroller and bluntnose guts. Our data thus consistently indicate that stoneroller minnows are excellent samplers that efficiently collect diverse, representative diatom samples.     

PHYLOGENETIC ANALYSIS AND GENOME SIZE OF OSTREOCOCCUS TAURI (CHLOROPHYTA, PRASINOPHYCEAE)

Ostreococcus tauri Courties et Chrétiennot-Dinet is the smallest described autotrophic eukaryote dominating the phytoplanktonic assemblage of the marine Mediterranean Thau lagoon (France). Its taxonomic position was partly elucidated from ultrastructure and high-pressure liquid chromatography (HLPC) pigment analysis. The sequence analysis of the 18S rDNA gene of O. tauri measured here is available in EMBL Nucleotide Sequence Database (accession number: Y15814) and allowed to clarify its phylogenetic position. O. tauri belongs to the Prasinophyceae and appears very close to Mantoniella, a typical scaly Prasinophyceae, morphologically very different from the naked and coccoid Ostreococcus. An electrophoretic analysis of O. tauri shows that the nucleus contains 10.20 mbp. This small genome, fragmented into 14 chromosomes ranging in size from 300 to 1500 kbp, confirms the minimalist characteristics of Ostreococcus tauri.     

STRUCTURE AND ABSOLUTE CONFIGURATION OF THE FLAGELLAR APPARATUS IN THE ISOGAMETES OF BATOPHORA (DASYCLADALES,CHLOROPHYTA)1

The overall appearance of the flagellar apparatus in the isogametes of Batophora oerstedii. J. Ag. is most like that which occurs in motile cells of the Ulvophyceae. Like other Ulvophyceae, the basal bodies overlap and are arranged in the 11/5 configuration, microtubular roots are arranged in a cruciate pattern and system II striated fibers are present. The basal body connective which generally lacks striation in the Ulvophyceae is clearly different in Batophora, being composed of two large non-striated halves which connect to the anterior surface of each basal body and are then connected to one another by a distinctly fibrous centrally striated region. This variation in the basal body connective and the presence of two posteriorly directed system II striated fibers is clearly different from homologous structures reported in siphonous green algae of the Caulerpales. Based upon these variations and similarities among flagellar apparatus components in siphonous green algae, it is suggested that the Dasycladales and Siphonodadales are more closely related to one another than to the Caulerpales.     

THE FLAGELLAR APPARATUS OF ENTOCLADIA VIRIDIS MOTILE CELLS,AND THE TAXONOMIC POSITION OF THE RESURRECTED FAMILY ULVELLACEAE (ULVALES,CHLOROPHYTA)1

The flagellar apparatuses of the quadriflagellate zoo-spores and biflagellate female gametes of the marine chaetophoracean alga Entocladia viridis Reinke are significantly different from those of algae belonging to Chaetophoraceae sensu stricto, but closely resemble those of ulvacean genera. These differences permit the taxonomic reassignment of certain marine chaetophoracean genera and an evaluation of the flagellar apparatus features used to characterize the class Ulvophyceae. Critical features of the zoospore include arrangement of the four basal bodies into an upper and a lower pair with the proximal ends of the upper basal bodies overlapping, terminal caps, proximal sheaths connected to one another by striated bands, and a cruciate microtubular rootlet system having a 3-2–3-2 alternation pattern and striated microtubule-associated components that accompany the two-membered rootlets. An indistinct distal fiber occurs just anterior to the basal bodies, and is closely associated with the insertion into the flagellar apparatus of the three-membered rootlets. The flagellar apparatus demonstrates 180° rotational symmetry, and its components show counterclockwise absolute orientation when viewed from above. Newly described features include the prominently bilobed structure of the terminal caps on the upper basal body pair, and the presence of both a granular zone and an additional single microtubule anterior to each of the four rootlets, an arrangement termed the “stacked rootlet configuration.” Rhizoplasts were not observed and are presumed to be absent. The gamete is identical, except for the absence of the lower basal body pair and the presence of an electron-dense membrane associated structure that resembles the mating structure found in Ulva gametes. These findings, correlated with life history data, sporangial and gametangial structure and developmental patterns, chloroplast pigment arrays, and vegetative cell ultrastructural features, compel the removal of Entocladia viridis and similar members of the marine Chaetophoraceae to a separate family, the Ulvellaceae. The latter is referred to the order Ulvales of the Ulvophyceae. The counterclockwise absolute orientation of components, and terminal caps, may be the most consistent flagellar apparatus features of ulvophycean green algae, while variations in other features previously considered diagnostic for the Ulvophyceae may serve instead to identify discrete lineages within this class.     

ASEXUAL AND SEXUAL REPRODUCTION IN GONIUM QUADRATUM (CHLOROPHYTA) WITH A DISCUSSION OF PHYLOGENETIC RELATIONSHIP WITHIN THE GONIACEAE1

Morphological details of asexual and sexual reproduction in Gonium Quadratum Pringsheim ex Nozaki (Goniaceae, Chlorophyta) were observed by light microscopy, based on clonal cultured materials originating from Nepal. In asexual reproduction, the alga exhibited two different patterns of cell cleavage during formation of 8-and 16-celled daughter colonies. Sexual reproduction was heterothallic and isogamous. The gametes bore a tubular mating structure (bilateral mating papilla) at the base of the flagella, and the papillae of the two gametes. The germinating zygote gave rise to four biflagellate gone cells joined in a colony (germ colony). Possible phylogenetic relationships within the Goniaceae at the species level are outlined, mainly on the basis of reproduction characteristics.     

MOTILE CELL ULTRASTRUCTURE AND THE CIRCUMSCRIPTION OF THE ORDERS ULOTRICHALES AND ULVALES (ULVOPHYCEAE,CHLOROPHYTA)

We have examined the motile cell ultrastructural features of several green algal species having filamentous or foliose thallus morphology and probable affinities with the Ulvophyceae, and compared them with the structural, reproductive, and life history features known for these taxa. We separate the algae studied into the orders Ulotrichales and Ulvales on the basis of consistent variations in terminal cap and proximal sheath structure that correlate well with life history patterns and certain features of sporangial and gametangial structure and development. Body scales are present only in certain members of the Ulotrichales. Both orders encompass a variety of thallus forms, demonstrating parallel evolution of thallus morphology. Flagellar apparatus features common to all the motile cells examined include 180° rotational symmetry, counterclockwise absolute orientation, the positioning of the basal bodies in an apical papilla, and the presence of one or more sets of striated bands associated with the X rootlets. Additional features that are usually present include basal body overlap and orientation roughly perpendicular to the long axis of the cell during forward swimming, striated distal fibers, and a single, striated, microtuble-associated component underlying each two-membered rootlet. These similarities indicate to us that the two groups are closely related members of the Ulvophyceae. We suggest that the Ulotrichales is the most primitive ulvophyceous assemblage known, but that all groups studied have advanced features relative to those supposed to have been present in the ancestral members of the Ulvophyceae.     

ULTRASTRUCTURE AND PHYLOGENETIC RELATIONSHIPS OF CHAETOPELTIDALES ORD. NOV. (CHLOROPHYTA,CHLOROPHYCEAE)1

Vegetative cells and zoospores of Hormotilopsis gelatinosa Trainor & Bold, H. tetravacuolaris Arce & Bold, Planophila terrestris Groover & Hofstetter, and Phyllogloea fimbriata (Korchikov) Silva were examined by transmission electron microscopy. All cells had pyrenoids traversed by cytoplasmic channels. Zoospores were quadriflagellate and had essentially cruciate flagellar apparatuses. Scales were present on free-swimming zoospores. These features are essentially identical to those of Chaetopeltis sp. and are dissimilar to those of other described green algae. The new order Chaetopeltidales is created to accommodate the genera Chaetopeltis, Hormotilopsis, Planophila sensu Groover & Hofstetter, Phyllogloea, Dicranochaete, and Schizochlamys, organisms previously scattered among the orders Tetrasporales, Chloro-coccales, Chlorosarcinales, and Chaetophorales. Members of the order are closely related to the ancestral chlorophycean flagellate genus Hafniomonas, may be ancestral with respect to other Chlorophyceae, and may also be closely related to the ulvophycean order Ulotrichales.     

PHYLOGENETIC ANALYSIS OF YAMAGISHLELLA AND PLATYDORINA (VOLVOCACEAE,CHLOROPHYTA) BASED ON rbcL GENE SEQUENCES1

Yamagishiella, based on Pandorina unicocca Rayburn et Starr, is distinguished from Eudorina by its isogamous sexual reproduction, whereas Platydorina exhibits anisogamous sexual reproduction. In the present study, we sequenced the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcL) genes from five Japanese and North American strains of Y. unicocca (Rayburn et Starr) Nozaki, two Platydorina caudata Kofoid strains, and two strains of Eudorina unicocca G. M. Smith, as well as eight related colonial and unicellular species. Phylogenetic trees were constructed based on these sequence data and on previously published rbcL gene sequences from 23 volvocalean species in order to deduce phylogenetic relationships within the colonial Volvocales, with particular regard to the phylogenetic positions and status of the genera Yamagishiella and Platydorina. Two robust monophyletic groups of the anisogamous/oogamous volvocacean species were resolved in the maximum-parsimony tree as well as in the neighbor-joining distance tree. One of the two groups comprises three species of Volvox section Volvox, whereas the other is composed of other sections of Volvox as well as of all the species of Eudorina and Pleodorina. Platydorina, however, was positioned outside these two monopliyletic groups. Therefore, derivation of the Platydorina lineage may be earlier than that of such anisogamous/oogamous groups, or orgin of “anisogamy with sperm packets” in Platydorina may be independent of sperm packet evolution in Eudorina, Pleodorina, and Volvox. It was also resolved with high bootstrap values that all of the Y. unicocca strains form a monophyletic group positioned outside the large monophyletic group including Eudorina and Pleodorina. These reject the possibility of the reverse evolution of isogamy from anisogamy to give rise to Yamagishiella within the lineage of Eudorina.     

ABSOLUTE CONFIGURATION ANALYSIS OF THE FLAGELLAR APPARATUS IN CLADOPHORA AND CHAETOMORPHA MOTILE CELLS,WITH AN ASSESSMENT OF THE PHYLOGENETIC POSITION OF THE CLADOPHORACEAE (ULVOPHYCEAE,CHLOROPHYTA)

Absolute configurational analyses of flagellar apparatus components were performed on the motile cells produced by three species of Cladophora, Cl. dalmatica Kütz., Cl. flexuosa (Dillw.) Harv., and Cl. glomerata (L.) Kütz., and by Chaetomorpha aerea (Dillw.) Kütz. There was little variation among the species. All of the flagellar apparatuses demonstrated the ulvophyceous features of 180° rotational symmetry, counterclockwise absolute orientation, and basal body overlap, as well as the alignment of the basal bodies perpendicular to the long axis of the cell. Diagnostic features included the nearly complete absence of C tubules from the basal bodies and the presence of a coarsely striated component dorsal to the two-membered rootlets in all cells, as well as, in quadriflagellate cells, a tetralobate distal fiber, the coaxial arrangement of the lowermost pair of basal bodies, and the presence of a characteristic array of basal-body-associated striated bands. The distal fiber architecture, the presence of a “wing” in the X-membered rootlets, and the “flattening” of the flagellar apparatus components suggests a close relationship of the Cladophoraceae to the Dasycladales, and indicates that these two groups may have shared a common ancestor, possibly ancient in terms of the geological time scale but relatively recent in the context of ulvophyceous evolution. A sizeable phylogenetic gap exists between the Cladophoraceae and uninucleate-celled, presumably primitive members of the Ulvophyceae.     

PHYLOGENETIC RELATIONSHIPS AMONG ISOLATES OF EUDORINA SPECIES (VOLVOCALES, CHLOROPHYTA) INFERRED FROM MOLECULAR AND BIOCHEMICAL DATA

Phylogenetic analyses of 19 strains representing five species of Eudorina, one strain of Pleodorina indica, and seven strains of Yamagishiella unicocca were carried out by sequencing the internal transcribed spacer region (ITS 1 and ITS 2) of the nuclear ribosomal DNA (rDNA) repeats. The sequence data resolved five phylogenetic groups, one consisting of Y. unicocca and the other four encompassing all the Eudorina species. Two isolates, Eudorina sp. (ASW 05157) and Pleodorina indica (ASW 05153), were of uncertain affiliation. Whereas one monophyletic group included strains of E. elegans only, the other strains of E. elegans appeared alongside E. cylindrica, E. illinoisensis, and E. unicocca var. unicocca in the other Eudorina clades. The distribution pattern of the carotenoid loroxanthin ([3R,3'R,6'R]-β,ε-carotene-3,19,3'-triol), a systematically useful biochemical marker within chlorophycean flagellates, was shown to match the evaluated molecular data. Whereas it was either totally absent or universally present in six of the deduced phylogenetic lines, it occurred randomly in the E. elegans clade containing only E. elegans isolates. The results substantiated the current hypothesis that the unique vegetative morphology of E. elegans has independently arisen at various times during evolution and that it is not a marker of a monophyletic group.     

PHYLOGENETIC RELATIONSHIPS OF CAULERPA (CHLOROPHYTA) BASED ON COMPARATIVE CHLOROPLAST ULTRASTRUCTURE1,2

The ultrastructure of chloroplasts from 28 of the 73 species of Caulerpa Lamouroux (Chlorophyta, Caulerpales) has been studied to aid in interpreting phylogenetic relationships among the 12 recognized sections. Variations of systematic value include pyrenoid occurrence and fine structure, thylakoid architecture and amount of photosynthate storage. Comparisons of field and culture specimens indicate these characters are consistent. Chloroplast thylakoids are grouped into bands, with the distribution of bands differing among species. In the most common arrangement, bands are evenly distributed throughout the chloroplast. A few species show lateral displacement of bands whereas others have a majority of bands arranged at one end of the chloroplast. Starch is stored cither as one or two large grains (> 1 μm diam.) or numerous small grains (< 0.5 μm diam.). Electron-transparent regions are common in other species in which chloroplasts rarely store starch. Simple, embedded pyrenoids are present in several species of section Sedoideae. An opaque region occurs in chloroplasts of C. elongata which may represent an intermediate stage in the evolutionary loss of the pyrenoid. It is suggested that the chloroplast of Caulerpa evolved, from a large, complex, pyrenoid-containing organelle housing both photosynthetic and amylogenic functions, to a small, structurally simpler one, specialized for photosynthesis alone. A phylogeny of the 12 sections of Caulerpa is constructed, based on chloroplast evolution which agrees with an earlier morphology-based hypothesis on the origin and evolution of Caulerpa.     

IMMUNOLOGICAL AND ULTRASTRUCTURAL CHARACTERIZATION OF THE PHOTOSYNTHETIC COMPLEXES OF THE PROCHLOROPHYTE PROCHLOROCOCCUS (OXYCHLOROBACTERIA)

Ultrastructural features and immunological properties of some thylakoid proteins were examined in two strains of the prochlorophyte Prochlorococcus and compared to those of other photosynthetic prokaryotes and eukaryotes. Both strains exhibited two or three rows of tightly appressed thylakoidal membranes, located at the cell periphery. However, thylakoids were concentrically arranged in the strain from the Sargasso Sea (SARG) and horseshoe-shaped in the Mediterranean isolate (CCMP 1378). Although lacking phycobilisomes, both cell types shared with cyanobacteria the presence of carboxysome-like structures and glycogen granules as storage compounds. The main thylakoid polypeptides separated by sodium dodecyl sulfate—polyacrylamide gel electrophoresis were characterized by Western blotting using several antibodies. The 30-kDa polypeptide of the light-harvesting complex (LHC) of Prochlorococcus showed a weak positive immunological cross-reaction with an antibody raised against the 32-kDa apoprotein of the LHC of the prochlorophyte Prochlorothrix hollandica. In contrast, it showed no immunological relationships with the chlorophyll a/b (Chl a/b) LHCs of green algae and higher plants. Protein membranes from Prochlorococcus strongly cross-reacted with antibodies raised against reaction center polypeptides of photosystems II and I (PSs II and I) of other photosynthetic organisms, confirming the high degree of conservation of these basic compounds of the photosynthetic machinery during evolution. Immunolocalization of thylakoid proteins showed that the LHC proteins, the major PS II reaction center proteins (CP 43 and D2), and the PS I reaction center proteins were equally distributed within the thylakoid membranes in contrast to the segregation observed in higher plants and green alga thylakoids. We also identified ribulose-1, 5-bisphosphate carboxylase/oxygenase in the carboxysomes. These results suggest that Prochlorococcus is more closely related to cyanobacteria than to green plastids even though it contains Chl b.     

18S rDNA AND EVOLUTION IN THE DASYCLADALES (CHLOROPHYTA): MODERN LIVING FOSSILS1

Phylogenetic relationships were inferred from parsimony and distance analyses of nuclear small-subunit ribosomal DNA sequences taken from 14 species representing 8 of the 11 extant genera in the Dasycladales. Of 1733 aligned positions, 412 (23.8%) were variable and 251 (61%) of those were phylogenetically informative within the Dasycladales. Secondary structure was analyzed and taken into account during all phases of data analysis. Robustness of the trees was assessed using bootstrap analysis and g₁ statistics of tree-length decay. Strongly supported branches were robust to all methods of analysis regardless of weighting schemes used. The secondary structure of the 18S within the Dasycladales agrees with that of other green algae with the exception of a shared deletion in stemloop E10-1 (ca. 13 nucleotides long), which provides additional support for the uniqueness of this monophyletic group. A molecular clock was calibrated from the dasyclad fossil record and suggests a radiation of the Acetabulariaceae at 120 ± 30 million years (Ma) ago and the Dasycladaceae 215 ± 40 Ma ago. The split of the two lineages from a shared ancestor is estimated at 265 ± 50 Ma ago. Within the Dasycladaceae, Neomeris and Cymopolia are sister taxa, as are Batophora and Chlorocladus. Bornetella groups with the Neomeris and Cymopolia clade in 78% of the bootstrap replicates. Relationships among the Acetabulariaceae show that Acetabularia and Polyphysa do not form monophyletic groups as presently circumscribed. No evidence indicates that Acicularia is the oldest genus. Halicoryne, Chalmasia, and Dasycladus were not included in the analysis. Molecular data provide afresh background perspective from which to discuss the evolution of one of the most ancient lineages of green plants.