The effects of increased flow and fine sediment on hyporheic invertebrates and nutrients in stream mesocosms

相似文献   

Realism of model ecosystems: an evaluation of physicochemistry and macroinvertebrate assemblages in artificial streams

Ecological realism is an important yet rarely reported feature of model ecosystems. In this case study, we assess the realism of four outdoor artificial stream mesocosms (4 m²) bordering a chalk river in southern England. Comparisons of physiochemical conditions and benthic macroinvertebrate assemblages were made between the mesocosm units and the parent water body, a side arm of the River Frome. Physicochemistry of the mesocosm replicates was similar to that of the source stream, with congruent temporal variation evident between the real system and each of the models. The high realism of the mesocosms was explained by the outdoor location and close physical proximity of the array to the source stream, and the short mesocosm residence time of water sourced from the parent feeder system. Mesocosms supported a diverse array of benthic macroinvertebrates (60 families from 14 taxonomic orders), including all macroinvertebrate families in the source stream. Individual mesocosms contained a mean of 89% of source stream biota. We conclude that once-through mesocosms can be satisfactory analogues of natural systems, particularly where model and natural scales overlap. Handling editor: D. Dudgeon     

Importance of advective mass transfer and sediment surface area for streambed microbial communities

相似文献   

Bacterial Diversity in Shallow Oligotrophic Marine Benthos and Overlying Waters: Effects of Virus Infection,Containment, and Nutrient Enrichment

Little is known of the factors shaping sediment bacterial communities, despite their high abundance and reports of high diversity. Two factors hypothesized to shape bacterial communities in the water column are nutrient (resource) availability and virus infection. The role these factors play in benthic bacterial diversity was assessed in oligotrophic carbonate–based sediments of Florida Bay (USA). Sediment–water mesocosm enclosures were made from 1-m diameter clear polycarbonate cylinders which were pushed into sediments to 201 cm sediment depth enclosing 80 L of water. Mesocosms were amended each day for 14 d with 10 µM NH ₄ ⁺ and 1 µM PO ₄ ^3– . In a second experiment, viruses from a benthic flocculent layer were concentrated and added back to flocculent layer samples which were collected near the mesocosm enclosures. Photosynthesis by microalgae in virus-amended incubations was monitored by pulse-amplitude modulated (PAM) fluorescence. In both experiments, bacterial diversity was estimated using automated rRNA intergenic spacer analysis (ARISA), a high-resolution fingerprinting approach. Initial sediment bacterial operational taxonomic unit (OTU) richness (236 ± 3) was higher than in the water column (148 ± 9), where an OTU was detectable when its amplified DNA represented >0.09% of the total amplified DNA. Effects on bacterial diversity and operational taxonomic unit (OTU) richness in nutrient-amended mesocosms may have been masked by the effects of containment, which stimulated OTU richness in the water column, but depressed OTU richness and diversity in sediments. Nutrient addition significantly elevated virus abundance and the ratio of viruses to bacteria (p < 0.05 for both) in the sediments, concomitant with elevated bacterial diversity. However, water column bacterial diversity (in unamended controls) was not affected by nutrient amendments, which may be due to rapid nutrient uptake by sediment organisms or adsorption of P to carbonate sediments. Addition of live viruses to benthic flocculent layer samples increased bacterial OTU diversity and richness compared with heat-killed controls; however, cluster analyses showed that the community structure in the virus-amended mesocosms varied greatly between replicates. Despite the strong effects upon eubacterial communities, photosynthesis of co-occurring protists and cyanobacteria was not significantly altered by the presence of virus concentrates. This study supports the hypothesis that nutrient availability plays a key role in shaping sediment bacterial communities, and also that viruses may regulate the abundance of the dominant competitors and allow less dominant organisms to maintain or increase their abundance in a community due to decreased competition for resources.     

Vertical movements through subsurface stream sediments by benthic macroinvertebrates during experimental drying are influenced by sediment characteristics and species traits

相似文献   

Streambed microstructure predicts evolution of development and life history mode in the plethodontid salamander Eurycea tynerensis

Background

Habitat variation strongly influences the evolution of developmentally flexible traits, and may drive speciation and diversification. The plethodontid salamander Eurycea tynerensis is endemic to the geologically diverse Ozark Plateau of south-central North America, and comprises both strictly aquatic paedomorphic populations (achieving reproductive maturity while remaining in the larval form) and more terrestrial metamorphic populations. The switch between developmental modes has occurred many times, but populations typically exhibit a single life history mode. This unique system offers an opportunity to study the specific ecological circumstances under which alternate developmental and life history modes evolve. We use phylogenetic independent contrasts to test for relationships between a key microhabitat feature (streambed sediment) and this major life history polymorphism.

Results

We find streambed microstructure (sediment particle size, type and degree of sorting) to be highly correlated with life-history mode. Eurycea tynerensis is paedomorphic in streams containing large chert gravel, but metamorphoses in nearby streams containing poorly sorted, clastic material such as sandstone or siltstone.

Conclusion

Deposits of large chert gravel create loosely associated streambeds, which provide access to subsurface water during dry summer months. Conversely, streambeds composed of more densely packed sandstone and siltstone sediments leave no subterranean refuge when surface water dries, presumably necessitating metamorphosis and use of terrestrial habitats. This represents a clear example of the relationship between microhabitat structure and evolution of a major developmental and life history trait, and has broad implications for the role of localized ecological conditions on larger-scale evolutionary processes.     

Spatio-temporal variability in benthic mineralization processes in the eastern English Channel

The effect of phytodetritus derived from Phaeocystis sp. bloom on benthic mineralization processes has been determined at four intertidal stations along the French coast of the eastern English Channel. Sites were chosen to offer a diversity of sediment types, from permeable sandy beach to estuarine mudflats. Sediment Oxygen Demand (SOD) as well as total fluxes of Dissolved Inorganic Nitrogen (DIN) at the sediment–water interface were determined by using whole core incubation technique and diffusive fluxes were predicted from interstitial water concentrations. In the absence of phytodetritus deposits, a marked gradient of granulometric characteristics and organic matter contents were observed, and resulted in more intensive mineralization processes in muddy sediments. Highly significant correlations (P < 0.05) were evidenced between SOD and porosity, bacterial biomass, Organic Carbon and Organic Nitrogen, evidencing the direct link between sediment texture, organic matter accumulation and microbial activity. The spring bloom led to a massive input of organic matter in surficial sediments and mineralization rates significantly increased while higher DIN release towards the water column was observed. A modification of the mineralization pathways was evidenced but clearly depended on the sediment type. With a global view, benthic mineralization processes in the intertidal zone provided significant a part of DIN inputs in the coastal zone while water column was depleted in nutrients.     

Replicability of physicochemistry and macroinvertebrate assemblages in stream mesocosms: implications for experimental research

1. The replicability of mesocosms is assessed in a case study of artificial streams (4 m²) flanking a lowland chalk river in southern U.K. Among‐mesocosm comparisons of physicochemistry and macroinvertebrate assemblage composition (in drift and benthos) were made during a 2‐year survey of 12 outdoor once‐through linear channels. 2. Mesocosm physicochemistry was highly replicable, with statistically significant congruence in temporal variation across the mesocosm series, low spatial variation and no significant blocking or positional effects arising from mesocosm layout. Parallel physicochemistry was attributed to the outdoor stream‐side location and short water residence times. 3. Mesocosms were colonized by 127 macroinvertebrate taxa from 15 taxonomic orders. Both benthic and drifting assemblages were comparable among mesocosms, with no significant effect of mesocosm layout. Small differences in taxonomic composition were, however, evident among particular mesocosms, with higher (e.g. Tinodes, Limnius and Elmis) or lower (e.g. Pisidium and Valvata) abundances observed for a minority (5%) of taxa. We conclude that large (4 m²) outdoor flow – through mesocosms can be replicable when located near to the source system and allowed to establish naturally.     

Do parafluvial zones have an impact in regulating river pollution? Spatial and temporal dynamics of nutrients,carbon, and bacteria in a large gravel bar of the Doubs River (France)

The changes in both physical and chemical properties of interstitial water were investigated within a large gravel bar to determine if the parafluvial zone was a hotspot for nutrient transformations in a lowland eutrophic river, the Doubs (Eastern France). Interstitial water was sampled in 30 piezometers along five transects across the gravel bar, surface water was sampled in main and chute channels. Five campaigns of sampling were performed among summer and winter. In both interstitial and surface samples, water chemistry (electrical conductivity, pH, chloride, dissolved oxygen concentrations—DO) and nutrient concentrations (nitrate—NO₃ ⁻, ammonium—NH₄ ⁺, soluble reactive phosphorus—SRP, dissolved organic carbon—DOC) were measured. Moreover, temperature, water level, sediment grain size distribution and total bacterial abundance were assessed along a flowpath through a lateral gravel bar of the Doubs River. Measurements of water table elevation in the bar, main and chute channels indicated that the parafluvial flowpath was perpendicular to the main channel. Very low changes in chloride concentration and electrical conductivity showed minor groundwater input along the flowpath. The parafluvial zone was 0.9 m thick under the mean piezometric level, hydraulic gradients along the flowpath were 0.3%, and the discharge of interstitial water through the bar calculated at low flow was 40.6 m³ day⁻¹. Most changes in interstitial nutrients occurred during the warm season, suggesting that biotic mechanisms occurred. Along the flowpath, DO, DOC, and bacterial abundance declined, while phosphate increased. Temporal trends of nitrate were less clear, exhibiting a slight increase during spring (organic matter biodegradation) and a decrease during summer (denitrification). Using the parafluvial discharge and nutrient concentrations of water infiltrating into and seeping from the gravel bar, the retention capacity of the bar was 171 gC day⁻¹ for DOC and 48.3 gN day⁻¹ for nitrate. Phosphate production ranged from 0.65 to 2.3 gP day⁻¹. These values were low compared to the nutrient fluxes in the river Doubs, suggesting a minimal local impact of the parafluvial zone in regulating of river pollution. Handling editor: J. Padisak     

Benthic microalgae: comparisons of chlorophyll a in mesocosms and field sites

A mesocosm facility is being developed by the CSIRO Division of Fisheries to study the movement, fate and impact of pollutants in coastal marine environments. Initially, we are studying coastal habitats in S.W Australia that are subject to wave action. A 12 week experiment assessed changes in biotic and abiotic components of sediment brought from the field into mesocosms. In these sediments, benthic microalgae are the major primary producers. Microalgal standing stocks were measured as the concentration of chlorophyll a and phaeopigments in the top 2 cm of sediment, and these measures were compared among mesocosms and field sites. Significant increases in chlorophyll a and phaeopigments, increased numbers of species and a shift from episammic to periphytic diatoms were observed, possibly caused by decreased water motion in mesocosms or other containment effects. Results from statistical power analyses suggested that our sampling was sufficiently well replicated and successfully incorporated variation at small spatial and temporal scales. Sampling effort used in this experiment should form the basis for future work with benthic microalgae.     

Using Tidal Salt Marsh Mesocosms to Aid Wetland Restoration

Tidal wetland mesocosms at Tijuana River National Estuarine Research Reserve failed to elucidate effects of hydrologic treatments (excluded, impounded, and fully tidal systems) for most parameters measuring Salicornia virginica (pickleweed). Although soil salinity increased where tidal flushing was excluded for 10 months (salinities rose ～20 to 50%), pickleweed cover and algal chlorophyll did not differ among treatments. Effects were seen only in pickleweed growth rates (～30% decrease where tides were excluded) and normalized difference vegetation index (NDVI) measurements. We failed to show any differences between impounded and fully tidal conditions, because the mesocosms had coarse sediments, and impounded water drained easily via subsurface flow. However, the problems that we encountered with the mesocosms led to the following advice for future wetland restoration projects: (1) Mesocosms are useful for testing restoration techniques before an actual restoration project takes place. (2) Mesocosms should be used to test factors that may lead to more successful restoration in the future, including planting techniques, substrate conditions, and hydrology. (3) Mesocosms should be used to develop new assessment methods for monitoring wetland ecosystems. Because of the ability to control some environmental parameters while maintaining seminatural conditions, mesocosms offer great potential for the future evaluation of experimental restoration techniques.     

Chemical composition of interstitial water and diffusive fluxes within the diatomaceous sediment in Lake Myvatn, Iceland

The sub-arctic Lake Myvatn is one of the most productive lakes in the Northern Hemisphere, despite an ice-cover of 190 days per year. This is due to relatively high solar radiation, nutrient rich inflow waters, N₂ fixation and internal nutrient loading. In order to define direction and magnitude of diffusive fluxes, soil water samplers were used to collect interstitial water from 25–150 cm depth, from within the diatomaceous sediment at the bottom of Lake Myvatn. Water depth at the sampling site was 225 cm. The pH of the interstitial water ranged from 7.16 to 7.30, while the pH of the lake water was 9.80–10.00. The concentrations of most solutes were similar 16 cm above the bottom of the lake at the sampling site and at the lake outlet. The concentrations of NO₃, S, F, O₂, Al, Cr, Mo, V, U, Sn and Sb were higher in the lake water than in the interstitial water. They will therefore diffuse from the lake water into the interstitial water. The concentrations of orthophosphates, PO₄, and total dissolved P were highest at 25 cm depth, but Co and NH₄ concentrations were highest at 50 to 100 cm depth. Thus they diffuse both up towards the lake bottom and down deeper into the sediments. The concentrations of Na, K, Ca, Mg, Sr, Mn, Li and alkalinity were greater within the sediments than in the lake water and increased continuously with depth. The Si concentration of the interstitial water was higher than in the lake water, it was highest at 25 cm depth and decreased slightly down into the sediments. The concentration gradient was greatest for bicarbonate, HCO₃ ^–, 1.5×10^–7 mol cm^–3 cm^–1, and then in declining order for the solutes with the highest gradient; NH₄, Si, Na, Ca, Mg, -S (diffusion into the sediments), K, PO₄, Cl, Fe and Mn. The estimated annual diffusive flux of PO₄ for Lake Myvatn was 0.1 g P m^–2 yr^–1, about 10% of the total PO₄ input to Lake Myvatn. The H₄SiO₄° flux was 1.3 g Si m^–2 yr^–1, <1% of both the input and the annual net Si fixation by diatoms within the lake and the diffusive flux of dissolved inorganic carbon was 1% of the annual net C fixation by diatoms. Annual diffusive flux of NH₄ ⁺ was 1.9 g N m^–2 yr^–1 similar to the input of fixed N to the lake and 24% of the net N fixation within Lake Myvatn. Thus it is important for the nitrogen budget of Lake Myvatn and the primary production in the lake since fixed nitrogen is the rate determining nutrient for primary production.     

Nutrient transfer between parafluvial interstitial water and river water: influence of gravel bar heterogeneity

1. Nutrient concentrations in interstitial water springs at the downstream ends of two gravel bars in the River Rhône were measured in order to estimate the importance of nutrient inputs [nitrate, dissolved organic carbon (DOC), biodegradable and refractory fractions of DOC] from the parafluvial zone (saturated sediments adjacent to the wetted channel, i.e. interstitial habitats of gravel bars) to the river as well as seasonal variations in these inputs.
2. Compared with surface water, parafluvial water had lower concentrations of DOC (especially the refractory fraction) and generally higher concentrations of nitrate. These differences were at their lowest during winter.
3. The influence of gravel bar geomorphological heterogeneity (grain size and spatial distribution of fine sediments) on parafluvial inputs was studied in terms of nutrient content and biofilm characteristics along transects across the gravel bars.
4. A gravel bar located in a stable area of the river had low transversal heterogeneity and acted as a sink for DOC and as a source of nitrate. The low fine sediment content and the high oxygenation of interstitial water must have enabled aerobic processes such as mineralization of organic matter and nitrification to occur.
5. In contrast, gravel bars located in a degradation zone of the river had a spatially variable structure, acting as a sink for DOC and nitrate because localized accumulation of fine sediment and ensuing hypoxic conditions induced anaerobic processes such as denitrification.
6. This study highlights the important influence of geomorphological heterogeneity in gravel bars for nutrient transformations as well as nutrient exchanges between parafluvial interstitial systems and the adjacent river over a seasonal cycle.     

How does coarse gravel augmentation affect early‐stage Chinook salmon Oncorhynchus tshawytscha embryonic survivorship?

Early‐stage Chinook salmon Oncorhynchus tshawytscha embryos were incubated in artificial redds that mimicked hyporheic conditions in gravel‐augmented habitat to assess survivorship. Two complementary experiments were conducted where units varied along gradients of (1) increasing interstitial flow velocity (0·05–2·50 cm s^?1) in a uniformly coarse (particles ≥22 mm) sediment mixture and (2) increasing sediment porosity with interstitial flow velocity held constant. Embryonic survivorship increased moderately along a gradient of interstitial flow velocity, while survivorship among units with varying sediment porosities was consistent. No evidence for flow‐induced agitation and mortality was observed. Results suggest that high interstitial flow velocities may confer a moderate advantage for incubating salmonid embryos when conditions that typically reduce embryonic mortality (i.e. low concentrations of fine particles) are ideal.     

Water-sediment exchanges control microbial processes associated with leaf litter degradation in the hyporheic zone: a microcosm study

The present study aimed to experimentally quantify the influence of a reduction of surface sediment permeability on microbial characteristics and ecological processes (respiration and leaf litter decomposition) occurring in the hyporheic zone (i.e. the sedimentary interface between surface water and groundwater). The physical structure of the water–sediment interface was manipulated by adding a 2-cm layer of coarse sand (unclogged systems) or fine sand (clogged systems) at the sediment surface of slow filtration columns filled with a heterogeneous gravel/sand sedimentary matrix. The influence of clogging was quantified through measurements of hydraulic conductivity, water chemistry, microbial abundances and activities and associated processes (decomposition of alder leaf litter inserted at a depth of 9 cm in sediments, oxygen and nitrate consumption by microorganisms). Fine sand deposits drastically reduced hydraulic conductivity (by around 8-fold in comparison with unclogged systems topped by coarse sand) and associated water flow, leading to a sharp decrease in oxygen (reaching less than 1 mg L⁻¹ at 3 cm depth) and nitrate concentrations with depth in sediments. The shift from aerobic to anaerobic conditions in clogged systems favoured the establishment of denitrifying bacteria living on sediments. Analyses performed on buried leaf litter showed a reduction by 30% of organic matter decomposition in clogged systems in comparison with unclogged systems. This reduction was linked to a negative influence of clogging on the activities and abundances of leaf-associated microorganisms. Finally, our study clearly demonstrated that microbial processes involved in organic matter decomposition were dependent on hydraulic conductivity and oxygen availability in the hyporheic zone.     

Effect of Vallisneria americana (L.) on community structure and ecosystem function in lake mesocosms

Submerged aquatic vegetation is known as a key structural component and regulator in ecosystems. In this mesocosm study, we examine community- and system-level responses to the presence of Vallisneria americana (L), a deep-rooted macrophyte. Phytoplankton, bacteria and filamentous algal biomasses were significantly lowered in the presence of V. americana. In addition, mesocosms with macrophytes had significantly reduced porewater phosphate and iron, water column dissolved organic carbon and total suspended solids, but elevated sediment redox. All mesocosms were net autotrophic (gross primary production/respiration >1). Compared to the macrophyte treatments, the control mesocosms had lower diel net primary production (NPP) midway through the experiment (d 16), but at the end of the experiment (d 36), the controls had the higher values, presumably due to increased filamentous algae. NPP and NPP/R were constant in the macrophyte treatments, whereas NPP/R increased significantly from middle to end of the experiment in the controls. We show that community and system-level responses to the presence of V. americana have significant consequences on system structure and function.     

Influence of streambed sediment clogging on microbial processes in the hyporheic zone

1. The hyporheic zone plays a key role in hydrological exchange and biogeochemical processes in streambed sediments. The clogging of sediments caused by the deposition of particles in the bed of streams and rivers can decrease sediment permeability and hence greatly affect hyporheic microbial processes. 2. The main objective of this study was to determine the influence of sediment clogging on hyporheic microbial processes in three French rivers (the Usses, Drôme and Isère). In each river, microbial abundance and activity were studied at three depths (10, 30 and 50 cm) in the sediment at one unclogged (high porosity) and one clogged site (low porosity). 3. The results showed that the sediment clogging had inconsistent effects on microbial processes in the three rivers. Increases (Usses) or decreases (Drôme and Isère) in both aerobic and anaerobic processes were detected at the clogged sites compared to unclogged sites. These results suggest that microbial changes because of the sediment clogging are mainly mediated by the residence time of water within the hyporheic sediments. 4. A single model predicting the effect of clogging on hyporheic microbial processes cannot be applied generally to all rivers because the degree of clogging creates heterogeneous effects on flow rates between surface and interstitial waters. As a consequence, the influence of heterogeneous clogging on surface water–hyporheic exchanges needs to be evaluated by water tracing and hydraulic modelling to determine the links between microbial processes and hydraulic heterogeneity induced by clogging in hyporheic sediments.     

Implications of guppy (Poecilia reticulata) life‐history phenotype for mosquito control

Guppies (Poecilia reticulata) are frequently introduced to both natural and artificial water bodies as a mosquito control. Laboratory studies have demonstrated that guppies can consume large numbers of larval mosquitoes. Our study investigates how intraspecific variability in guppy phenotype affects their importance as a mosquito biocontrol and how habitat conditions (natural ponds vs. water storage containers) may influence insect biomass and guppy feeding. Using a blocked experimental design, we established stream‐side mesocosm ponds with half receiving gravel substrate to simulate pond‐bottom habitat. To provide realistic diet choices and insect abundances, we allowed the mesocosms to colonize naturally with aquatic insect larvae for 1 month before introducing guppies. We tested two distinct guppy phenotypes (from high‐ and low‐predation streams) alongside fish‐free controls. After 1 month, we measured insect biomass in the mesocosms and examined guppy gut contents to document direct predation. While overall insect biomass was not significantly different across the three fish treatments, we observed a significant reduction in mosquito biomass in fish treatments compared to fish‐free controls, as well as intraspecific differences in feeding. Overall insect biomass was significantly higher in mesocosms without gravel, while habitat condition had no effect on mosquito biomass. As guppy phenotype responds to changes in their environments, it is an important consideration for biocontrol policy to anticipate potential ecosystem effects. We close by relating our findings to other studies and by discussing the implications and potential risks of using guppies to control mosquitoes.     

Ocean acidification and calcifying reef organisms: a mesocosm investigation

A long-term (10 months) controlled experiment was conducted to test the impact of increased partial pressure of carbon dioxide (pCO₂) on common calcifying coral reef organisms. The experiment was conducted in replicate continuous flow coral reef mesocosms flushed with unfiltered sea water from Kaneohe Bay, Oahu, Hawaii. Mesocosms were located in full sunlight and experienced diurnal and seasonal fluctuations in temperature and sea water chemistry characteristic of the adjacent reef flat. Treatment mesocosms were manipulated to simulate an increase in pCO₂ to levels expected in this century [midday pCO₂ levels exceeding control mesocosms by 365 ± 130 μatm (mean ± sd)]. Acidification had a profound impact on the development and growth of crustose coralline algae (CCA) populations. During the experiment, CCA developed 25% cover in the control mesocosms and only 4% in the acidified mesocosms, representing an 86% relative reduction. Free-living associations of CCA known as rhodoliths living in the control mesocosms grew at a rate of 0.6 g buoyant weight year⁻¹ while those in the acidified experimental treatment decreased in weight at a rate of 0.9 g buoyant weight year⁻¹, representing a 250% difference. CCA play an important role in the growth and stabilization of carbonate reefs, so future changes of this magnitude could greatly impact coral reefs throughout the world. Coral calcification decreased between 15% and 20% under acidified conditions. Linear extension decreased by 14% under acidified conditions in one experiment. Larvae of the coral Pocillopora damicornis were able to recruit under the acidified conditions. In addition, there was no significant difference in production of gametes by the coral Montipora capitata after 6 months of exposure to the treatments.