A 3 years' survey of potato aphids in north-east Yorkshire

This paper considers the suitability of north-east Yorkshire as a centre for the production of high-grade seed potatoes, taking the number of aphid vectors of virus diseases as the criterion. Counts of aphids were made during three consecutive seasons on selected fields on the higher land in this area. These counts are related to the various geographical, climatic and biological factors found in each field and conclusions are drawn as to the most suitable districts within the area and the type of field which is likely to prove most satisfactory for this crop.     

Diversity of Rich Fen Vegetation and Related Plant Specialists in Mountain Refugia of the Iberian Peninsula

In temperate mountains, fens have been reported as relict habitats subject to geographical fragmentation and broad climatic gradients, but few studies have analyzed the influence of these factors on plant diversity. Here we investigate the effect of isolation on the vegetation diversity of rich fens (Caricion davallianae) in the mountains of the Iberian Peninsula, the distribution limit of these habitats in south-western Europe. We used plot-based vegetation data from the Pyrenees and the Cantabrian mountain range to evaluate their regional species-pool, occurrence of specialists, beta-diversity and the effect of geo-climatic variables on their species-richness and species-composition. We found a lower ratio of rare specialists in the Pyrenees than in the Cantabrian range, but similar estimates in the species pools, total species-richness per plot and beta-diversity. The isolation of the two mountain regions resulted in different species assemblages best predicted by summer precipitation and bedrock types, showing region-based differences in the response of vegetation and plant specialists to the environment. The tighter correlation between local climate and diversity estimates in the Cantabrian range suggests relict character of rich fens in that region, where climatic conditions have restricted local distribution of formerly more widely distributed specialists. Although there is no relevant evidence of vegetation impoverishment in that region, historical isolation has probably resulted in the existence of fragmentary plant communities. We conclude that fen vegetation may experience long-time persistence in climatically sub-optimal mountain refugia, but related plant specialists may be sensitive to climatic changes and subject to the extinction of local populations.     

The geographical variation of network structure is scale dependent: understanding the biotic specialization of host–parasitoid networks

Research on the structure of ecological networks suggests that a number of universal patterns exist. Historically, biotic specialization has been thought to increase towards the Equator. Yet, recent studies have challenged this view showing non‐conclusive results. Most studies analysing the geographical variation in biotic specialization focus, however, only on the local scale. Little is known about how the geographical variation of network structure depends on the spatial scale of observation (i.e. from local to regional spatial scales). This should be remedied, as network structure changes as the spatial scale of observation changes, and the magnitude and shape of these changes can elucidate the mechanisms behind the geographical variation in biotic specialization. Here we analyse four facets of biotic specialization in host–parasitoid networks along gradients of climatic constancy, classifying the networks according to their spatial extension (local or regional). Namely, we analyse network connectance, consumer diet overlap, consumer diet breadth, and resource vulnerability at both local and regional scales along the gradients of both current climatic constancy and historical climatic change. While at the regional scale none of the climatic variables are associated to biotic specialization, at the local scale, network connectance, consumer diet overlap, and resource vulnerability decrease with current climatic constancy, whereas consumer generalism increases (i.e. broader diet breadths in tropical areas). Similar patterns are observed along the gradient of historical climatic change. We provide an explanation based on different beta‐diversity for consumers and resources across the geographical gradients. Our results show that the geographical gradient of biotic specialization is not universal. It depends on both the facet of biotic specialization and the spatial scale of observation.     

Influence of ethnicity, geography and climate on the variation of stature among Indian populations

This paper analyzes the variation in the mean stature of adult males of a variety of population groups in India and examines the influence of geographical, climatic and ethnic factors on it. A considerable variation in mean stature has been found with respect to these three attributes. Variation "between" ethnic groups compared with "within" ethnic groups was found to be much more than that of geographical and climatic zones. Scheduled Castes (SC) and Scheduled Tribes (ST) populations have much low average height than that of General Castes (GC). Climatically dry and semiarid zones have a tendency to have higher stature than in the Monsoon areas. The mean height has been found to be the highest in north India. It is closely followed by west India. An interesting feature is that as one goes towards east and south the mean height gradually decreases. It is the lowest in islands. The mean heights have been regressed on geographical, climatic and ethnic factors, after converting these factors into binary variables. The regression analysis has strengthened the findings, that there is a highly significant relationship between height and geographical, climatic and ethnic factors.     

Quantifying the roles of ecology and geography in spatial genetic divergence

Investigating the properties of ecological landscapes that influence gene flow among populations can provide key insights into the earliest stages of biological divergence. Both ecological and geographical factors can reduce gene flow, which can lead to population divergence, but we know little of the relative strengths of these phenomena in nature. Here, we use a novel application of structural equation modelling to quantify the contributions of ecological and geographical isolation to spatial genetic divergence in 17 species of Anolis lizards. Our comparative analysis shows that although both processes contributed significantly, geographical isolation explained substantially more genetic divergence than ecological isolation (36.3 vs. 17.9% of variance respectively), suggesting that despite the proposed ubiquity of ecological divergence, non‐ecological factors play the dominant role in the evolution of spatial genetic divergence.     

Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata

Lichens are symbioses between fungi (mycobionts) and photoautotrophic green algae or cyanobacteria (photobionts). Many lichens occupy large distributional ranges covering several climatic zones. So far, little is known about the large‐scale phylogeography of lichen photobionts and their role in shaping the distributional ranges of lichens. We studied south polar, temperate and north polar populations of the widely distributed fruticose lichen Cetraria aculeata. Based on the DNA sequences from three loci for each symbiont, we compared the genetic structure of mycobionts and photobionts. Phylogenetic reconstructions and Bayesian clustering methods divided the mycobiont and photobiont data sets into three groups. An amova shows that the genetic variance of the photobiont is best explained by differentiation between temperate and polar regions and that of the mycobiont by an interaction of climatic and geographical factors. By partialling out the relative contribution of climate, geography and codispersal, we found that the most relevant factors shaping the genetic structure of the photobiont are climate and a history of codispersal. Mycobionts in the temperate region are consistently associated with a specific photobiont lineage. We therefore conclude that a photobiont switch in the past enabled C. aculeata to colonize temperate as well as polar habitats. Rare photobiont switches may increase the geographical range and ecological niche of lichen mycobionts by associating them with locally adapted photobionts in climatically different regions and, together with isolation by distance, may lead to genetic isolation between populations and thus drive the evolution of lichens.     

Autonomous parvovirus vectors: preventing the generation of wild-type or replication-competent virus

The preferential expression of autonomous parvoviruses in tumour cells and their oncolytic activity has attracted attention to the potential use of these viruses as vectors for cancer gene therapy. Moreover, they are non-pathogenic in adult animals and they seem to be associated with low or no immunogenicity. Other interesting features are their episomal replication and high stability. Vectors derived from the autonomous parvoviruses MVM(p) or H1 express proteins that can directly or indirectly interfere with tumour development. They retain cis- and trans-acting sequences required for viral DNA amplification; the transgene replaces part of the capsid coding genes. Their development has been hampered by low titres and contamination with replication-competent virus (RCV) that is generated through homologous recombination with helper plasmids. Several approaches have been used to avoid recombination between vectors and helpers. In most instances, reducing the homology up- or downstream of the transgene in either the vector or the helper did not significantly affect RCV production. However, completely eliminating homology downstream of the transgene, splitting VP genes on different helpers or pseudotyping vectors resulted in the production of RCV-free stocks. Although VP-containing particles could sometimes be identified in these stocks by in situ hybridisation, they did not amplify and are therefore not true RCV. The integration of capsid-coding sequences into packaging cells also reduced contamination by RCV and allowed for the amplification of vectors through serial infections. Great progress has been made recently towards the generation of truly RCV-free stocks of vectors derived from autonomous parvoviruses H1 and MVMp. Combining these new vectors with a new packaging cell line should greatly facilitate their development.     

Ecological speciation in dynamic landscapes

Although verbal theories of speciation consider landscape changes, ecological speciation is usually modelled in a fixed geographical arrangement. Yet landscape changes occur, at different spatio-temporal scales, due to geological, climatic or ecological processes, and these changes result in repeated divisions and reconnections of populations. We examine the effect of such landscape dynamics on speciation. We use a stochastic, sexual population model with polygenic inheritance, embedded in a landscape dynamics model (allopatry-sympatry oscillations). We show that, under stabilizing selection, allopatry easily generates diversity, but species coexistence is evolutionarily unsustainable. Allopatry produces refuges whose persistence depends on the characteristic time scales of the landscape dynamics. Under disruptive selection, assuming that sympatric speciation is impossible due to Mendelian inheritance, allopatry is necessary for ecological differentiation. The completion of reproductive isolation, by reinforcement, then requires several sympatric phases. These results demonstrate that the succession of past, current and future geographical arrangements considerably influence the speciation process.     

陆栖哺乳动物的地理隔离研究进展

地理隔离是驱动物种分布格局形成的主要因素之一。本文回顾和总结了近几十年来地理隔离影响陆栖哺乳动物空间分布的研究成果, 从自然因素和人为因素两方面就地理隔离对物种分布的影响研究进展进行了综述。自然因素包括山脉、水体、沙漠和其他极端环境、气候变化等, 这些要素通常是在陆栖哺乳动物的缓慢演化进程中发挥作用; 人为因素侧重于因人类活动参与导致的物种分布变化, 包括景观结构变化、交通设施建设等, 在短短几百年甚至几十年内, 可以使物种分布特征发生显著变化。地理隔离对陆栖哺乳动物分布的作用是普遍而相对的, 长期存在且处于动态变化中。多种地理隔离因素之间的尺度效应不同, 哺乳动物在适应地理隔离的过程中表现出了生物个体和种群的响应过程。最后, 建议今后重点开展以下几方面的研究: (1)基于历史动物地理学与生态动物地理学, 深入研究地理隔离与动物地理边界形成的原因; (2)微观尺度下, 借助分子生物学和各种组学技术探讨地理隔离对物种遗传和适应机制的影响; (3)借鉴其他动物类群的研究经验, 加强对我国陆生哺乳动物的跟踪监测; (4)以数据驱动为导向, 将动物地理学与数据科学相结合, 以更好地分析动物分布的变迁史。     

An annotated checklist of Culicoides Latreille, 1809 (Insecta: Ceratopogonidae: Diptera) with incorporation of a vector species list from India

Culicoides Latreille, 1809 (Insecta : Diptera : Ceratopogonidae) are small nematocerous biological vectors of a wide range of pathogens of veterinary and medical importance. They are distributed worldwide but prefer warm, damp, and muddy areas. Female midges require blood for egg maturation. Studies on taxonomy, proper identification keys, and distribution patterns of these flies across different geographical regions of India of these flies are limited. This article provides an updated checklist of Culicoides spp. from India collected from various scattered publications, along with their synonyms and details on their subgenera, geographical distribution, and type locality. A compiled list of different Culicoides vectors from India has also been included separately in this article, along with the type of the diseases spread.     

Filamentous Fungi Transported by Birds During Migration Across the Mediterranean Sea

The potential for the transport and diffusion of some pathogenic microorganisms by migratory birds is of concern. Migratory birds may be involved in the dispersal of microorganisms and may play a role of mechanical and biological vectors. The efficiency of dispersal of pathogenic microorganisms depends on a wide range of biotic and abiotic factors that influence the survival or disappearance of a given agent in a geographical area. In the present study, 349 migratory birds were captured in four sites (Mazara del Vallo, Lampedusa, Ustica and Linosa), representing the main stop-over points during spring and autumnal migration, and analyzed for the presence of filamentous fungi. A total of 2,337 filamentous fungi were isolated from 216 birds and identified by a combined phenotypic-genotypic approach to species level. Twelve species were identified in the study, with Cladosporium cladosporioides, Alternaria alternata, and Aspergillus niger as the most abundant. The transport of these fungal species isolated in this study is of considerable importance because some of these species can create dangers to human health.     

The practical performance of cholera control measures in the USSR during the 7th pandemic

The critical analysis of anticholera measures carried out in the USSR since 1965 till the present time is presented. The grounds for the abolition or considerable reduction of a number of measures are considered from the viewpoint of their scientific substantiation, the adequacy of means and efforts spent for their realization and their antiepidemic effectiveness. Special attention is paid to the necessity of differentiated approach to these measures, depending on concrete local climatic and geographical, sanitary, hygienic and other factors which determine the epidemic potential of a given administrative territory.     

The roles of climatic factors in spatial patterns of alien invasive plants from America into China

The roles of climatic factors in plant invasions have drawn intense attention in the past. America was one of the major donors of the invasive plants in China. In this study, we investigated the roles of climatic factors in plant invasions from America into China through Akaike’s information criterion model analysis in terms of specific geographical origins, respectively. From south to north, decreasing trends of species diversity were observed on the plants from Central-South America and Mexico, while the greatest alien species diversity in mid-Chinese latitudes was observed on the invaders from North America; For the invaders from Central-South America and Mexico, climatic factors explained most of the spatial variations, while for those from North America, the roles of the climatic factors were weak. The role of the climatic factors in plant invasions may, in some extent, depend on the ecological characters inherited form the geographical origins and their accommodation to the climate of the invaded regions. If the invasive plants were introduced into the region with similar environment to their area of origin, the role of the climatic factors may be shadowed by other factors. However, for the invaders whom were introduced into the regions vastly different from their areas of origin, climatic barriers may be responsible for most of the spatial variations. The invasive plants from Central-South America and Mexico may have strong potential to invade regions at higher latitude in China in the scenario of global warming, while for the invaders from North America, the impacts of global warming may be shadowed by other factors.     

Phylogenetic properties of Tertiary relict flora in the east Asian continental islands: imprint of climatic niche conservatism and in situ diversification

Understanding biodiversity patterns on islands has long been a central aim in ecology and conservation biology. Island‐specific biogeographical processes play substantial roles in the formation of endemic biota. Here, we examined how climate niche conservatism and geohistorical factors are interactively associated with in situ diversification of Tertiary relict flora in the east Asian continental islands. We generated two novel datasets for species distribution and phylogeny that included all of the known vascular plant species in Japan (5575). Then we tested phylogenetic signal of climatic tolerance, in terms of absolute minimum temperature and water balance, and explored environmental predictors of phylogenetic structure (evolutionary derivedness and clustering) of species assemblages. Although phylogenetic signal of climatic tolerance was significant across the phylogeny of most species, the strength of climatic niche conservatism differed among ferns, gymnosperms, angiosperm trees, and angiosperm herbs. For angiosperm trees, cold temperatures acted as environmental filters that generated phylogenetic derivedness/clustering of species assemblages. For fern and angiosperm herb species, however, phylogenetic properties were not associated with climatic harshness. These contrasting patterns among groups reflected climate niche evolution in vascular plants with different growth forms and traits; for example, diversification of angiosperm trees (but not fern and herb) occurred in response to historical climatic cooling. More importantly, geographical constraints contributed to evolutionary radiation that resulted from isolation by distance from the continent or by elevation. Quaternary climate change was also associated with clade‐specific radiation in refugial habitats. The degree to which geographical, geological, and palaeoclimatic variables explain the phylogenetic structure underscores the importance of isolation‐ and habitat‐stability‐related geohistorical processes in driving in situ diversification despite climatic niche conservatism. We propose that the highly endemic flora of the east Asian islands resulted from the interplay of idiosyncratic regional factors, and ecological and evolutionary processes, such as climate niche assembly and adaptive/nonadaptive radiation.     

Ecological and geographic modes of species divergence in wild tomatoes

Understanding the role of geography and ecology in species divergence is central to the study of evolutionary diversification. We used climatic, geographic, and biological data from nine wild Andean tomato species to describe each species' ecological niche and to evaluate the likely ecological and geographical modes of speciation in this clade. Using data from >1000 wild accessions and publicly available data derived from geographic information systems for various environmental variables, we found most species pairs were significantly differentiated for one or more environmental variables. By comparing species' predicted niches generated by species distribution modeling (SDM), we found significant niche differentiation among three of four sister-species pairs, suggesting ecological divergence is consistently associated with recent divergence. In comparison, based on age-range correlation (ARC) analysis, there was no evidence for a predominant geographical (allopatric vs. sympatric) context for speciation in this group. Overall, our results suggest an important role for environmentally mediated differentiation, rather than simply geographical isolation, in species divergence.     

The climate velocity of the contiguous United States during the 20th century

Rapid climate change has the potential to affect economic, social, and biological systems. A concern for species conservation is whether or not the rate of on‐going climate change will exceed the rate at which species can adapt or move to suitable environments. Here we assess the climate velocity (both climate displacement rate and direction) for minimum temperature, actual evapotranspiration, and climatic water deficit (deficit) over the contiguous US during the 20th century (1916–2005). Vectors for these variables demonstrate a complex mosaic of patterns that vary spatially and temporally and are dependent on the spatial resolution of input climate data. Velocities for variables that characterize the climatic water balance were similar in magnitude to that derived from temperature, but frequently differed in direction resulting in the divergence of climate vectors through time. Our results strain expectations of poleward and upslope migration over the past century due to warming. Instead, they suggest that a more full understanding of changes in multiple climatic factors, in addition to temperature, may help explain unexpected or conflicting observational evidence of climate‐driven species range shifts during the 20th century.     

Spatial analysis of climatic and dispersion characteristics of Xylella fastidiosa outbreak by insect vectors

Xylella fastidiosa is a pathogen that causes fatal plant diseases and damage to horticultural crops. Establishing the basic parameters is necessary to assess the risk of disease outbreaks as there are concerns about the spread of X. fastidiosa. This is done by analyzing the climatic characteristics and distribution patterns of X. fastidiosa and related insect vectors. In this study, we aimed to derive the common climatic characteristics of X. fastidiosa and three major insect vectors by using a statistical density function for four climatic factors. In addition, the distance between the occurrence areas was calculated spatiotemporally and classified into natural and anthropogenic spread. The optimal climatic conditions identified for X. fastidiosa and the insect vectors were similar, suggesting a high potential for X. fastidiosa spread when both occur in a neighborhood area. X. fastidiosa spread mostly depends on anthropogenic pathways, but natural spread by insect vectors could increase. This study provides necessary insights for the risk assessment of X. fastidiosa spread based on climate similarity and spread patterns.     

Distribution and speciation in marine intertidal tardigrades: testing the roles of climatic and geographical isolation

Aim To analyse the importance of climatic and geographical isolation in determining the patterns of speciation and distribution of species within the tardigrade genus Echiniscoides. Location Marine intertidal zone, globally. Methods DNA was extracted from 465 individual tardigrades from 48 localities world‐wide. The tardigrades were divided into clusters using several distance‐based criteria. The phylogeny of these clusters was estimated with Bayesian analyses. The relationships between genetic distance and substrate, climate, and geographical distance were tested with a new improved Mantel test which incorporates phylogenetic uncertainties by analysing the raw tree data instead of the averaged tree. Results Approximately 40 clusters, each probably corresponding to species, were recovered from the genetic analysis; the number of clusters fluctuated depending on the criterion used for cluster delimitation. Each cluster had a limited temperature range and all clusters were confined to single oceans under all realistic criteria for cluster delimitation. Apart from a tropical cluster, each cluster occurred only in one hemisphere. Occurrence on different substrata was not correlated with genetic distance between clusters. Both geographical distance and climate were correlated with genetic distance; however, the correlation between geographical and genetic distance disappeared when the non‐independence of climatic and geographical distance were controlled for. Main conclusions The distribution of individual species of Echiniscoides is limited by climate and geographical distance. Distance does not appear to be a major factor influencing phylogeny in this genus, but ecological speciation along a temperature gradient appears to be important.     

Use of Bullfrogs in Biological Research

This paper points out some deficiencies of bullfrogs now usedin biological research. The need for obtaining stocks with informationon geographical origin, age, nutrition, general health, andenvironmental conditions under which they were maintained orreared is paramount and can be obtained from commercial dealers.Growth rates and food utilization data with regard to bullfrogage and geographical origin are discussed in relation to theeffects these characteristics may have on data interpretationin many research projects. The logic of utilizing only largebullfrogs in research is discussed. Motile sperm of males grownunder laboratory conditions can be obtained in three monthsafter metamorphosis, and in females, eggs approaching maturityare produced in six months after metamorphosis.     

Comparing Vectors of Adjusted Means when Covariance Matrices are Unequal

The ability to distinguish between stocks of fish is of vital importance in fisheries management programs. Morphometric measurements are commonly employed to separate biological populations. Unique role of multivariate analysis of covariance in separating fish stocks has been recognized recently. However, fish populations frequently differ in their covariance matrices and sometimes also in vectors of slope (on the covariate) coefficients. In this article the following are presented: (a) a procedure for comparing adjusted (for variations in body sizes of specimens) mean vectors of populations with unequal covariance matrices and slopes, and (b) a study to distinguish between beaked redfishes based on the analysis of a real data set by this procedure. This will also serve as a numerical example.