Theory of the development of curved barbs and their effects on feather morphology

Feathers exhibit an extraordinary diversity of shapes, which are used by birds to accomplish a diverse set of functions. Pennaceous feathers have a double branched morphology that develops from a tube of epidermis, and variation in branch geometry determines feather shape. Feather development is both complex (i.e., a simple developmental modification can have multiple effects on mature feather shape), and redundant (i.e., different developmental modifications can create the same shape). Due to this, it is not readily apparent how different feather shapes develop. In many feathers, barbs are not straight, but instead curve in toward, or away, from the feather tip. Barb curvature can affect the shape of mature feathers but the development of curved barbs is unknown. Previous research has hypothesized that barb curvature could develop either during the helical growth of barb ridges in the tubular feather germ, or during barb angle expansion as the feather unfurls from the sheath. To better understand the development of curved barbs and their effects on mature feathers we present a theoretical model of curved barb development and test the model with empirical investigations of feathers. We find that curved barbs affect many aspects of feather morphology including vane width, barb length, and barb spacing. In real feathers, curved barbs can develop both during helical barb ridge growth and during barb angle expansion, with most of the observed curvature due to barb angle expansion. Our results demonstrate that barb angle expansion as a feather unfurls from the sheath is a complex and dynamic process that plays an important role in determining the shape and structure of mature feathers. Curved barbs create heterogeneity in barb geometry within the feather vane, which could have important implications for aerodynamic function and the development of within feather pigmentation patterns. J. Morphol. 277:995–1013, 2016. © 2016 Wiley Periodicals, Inc.     

Development of fluctuating asymmetry in tail feathers of the barn swallow Hirundo rustica

Fluctuating asymmetry represents usually small, random deviations from symmetry in bilateral morphological characters. The ontogeny of asymmetry in morphological characters may reveal information about developmental processes in a general sense. I studied the development of fluctuating asymmetry in feather characters of the barn swallow Hirundo rustica, that are developed repeatedly during the single annual moult, with the following results. First, the side developing a larger feather was found to be partially biased, as demonstrated by one side consistently developing a larger feather under natural and experimentally induced growth episode events. Second, asymmetric feathers were found to consist of asymmetric daily growth increments, and the size of the increments developing under different environmental conditions were positively correlated. Third, fluctuating asymmetries of feathers developing under different environmental conditions were positively correlated, although the level of asymmetry was larger under adverse environmental conditions. Fourth, individual asymmetries in tail length and growth bar length were unrelated to the duration of the developmental period, although late growth increments were smaller and more symmetric than early increments. These observations suggest that fluctuating asymmetry partially arises as a consequence of a random bias in the feather follicles and differences in environmental conditions during ontogeny of feathers.     

DEVELOPMENTAL NOISE,PHENOTYPIC PLASTICITY,AND ALLOZYME HETEROZYGOSITY IN DAPHNIA

Previous theories and studies have postulated negative correlations between allozyme heterozygosity and developmental noise and between heterozygosity and phenotypic plasticity. We examined these relationships for morphological and life-history traits of Daphnia magna in four independent experiments using two different Moscow populations and one German population. Clones were raised under a range of food levels or individual densities. Heterozygosity was scored at five allozyme loci in two experiments and at three loci in two others. Relative differences in developmental noise among clones with different heterozygosity levels were estimated as the pooled residual variation from an analysis of variation that removed the effects of macroenvironment, clones, and their interaction. Plasticity was measured as the amount of macroenvironmental variation plus genotype-by-environment interaction variation. We found a positive correlation between developmental noise and heterozygosity, although this correlation varied among traits and experiments. This result contradicts most previous claims about these relationships. In contrast, we found that phenotypic plasticity and heterozygosity were negatively correlated for some traits. Developmental noise and phenotypic plasticity were correlated for only two traits in two different experiments. This trait-specific relationship is in concordance with previous studies. Our results could not be explained by effects of developmental time, a previously hypothesized mechanism. We propose several explanations for our results and the disparate results of others that do not require that heterozygosity be the actual cause of variation in developmental noise.     

The relationship between fluctuating asymmetry and environmental variance in rhesus macaque skulls

This study measures the correlation between within- and among-individual variance to gain a greater understanding of the relationship of the underlying mechanisms governing developmental stability and canalization. Twenty-six landmarks were digitized in three dimensions from the crania of 228 adult macaques from Cayo Santiago. The phenotypic variance between individuals was measured and divided into its genetic and environmental components using matriline information. Within-individual variance was measured as the fluctuating asymmetry between bilateral landmarks. We found positive and significant correlations between the phenotypic, environmental, and fluctuating asymmetry variances for interlandmark distances. We also found low but significant correspondences between the covariation structures of the three variability components using both Procrustes and interlandmark distance data. Therefore, we find that in macaque skulls traits that exhibit greater levels of asymmetry deviations also exhibit greater levels of environmental variance, and that the covariances of absolute symmetry deviations partly correspond to covariances of mean deviations at the individual level. These results suggest that the underlying processes that determine canalization and developmental stability are at least partly overlapping. However, the low correlations reported here are also evidence for a degree of independence between these variability components.     

Developmental evolution of sexual ornamentation: model and a test of feather growth and pigmentation

A tremendous diversity of avian color displays has stimulatednumerous studies of natural and sexual selection. Yet, the developmentalmechanisms that produce such diversification, and thus the proximatetargets of selection pressures, are rarely addressed and poorlyunderstood. In particular, because feathers are colored duringgrowth, the dynamics of feather growth play a deterministicrole in the variation in ornamentation. No study to date, however,has addressed the contribution of feather growth to the expressionof carotenoid-based ornamentation. Here, we examine the developmentalbasis of variation in ornamental feather shapes in male housefinches (Carpodacus mexicanus)—a species in which carotenoiddisplays are under strong natural and sexual selection. First,we use geometric morphometrics to partition the observed shapevariation in fully grown feathers among populations, ages, degreesof elaboration, ornamental body parts, and individuals. Second,we use a biologically informed mathematical model of feathergrowth to predict variation in shape of ornamental feathersdue to simulated growth rate, angle of helical growth of featherbarbs, initial number of barb ridges, rate of addition of newbarbs, barb diameter, and ramus-expansion angle. We find closeconcordance between among-individual variation in feather shapeand hue of entire ornament, and show that this concordance canbe attributed to a shared mechanism—growth rate of featherbarbs. Predicted differences in feather shape due to rate ofaddition of barbs and helical angle of feather growth explainedobserved variation in ornamental area both among individualsand between populations, whereas differences in helical angleof growth and the number of barbs in the feather follicle explaineddifferences in feather shape between ornamental parts and amongmales of different ages. The findings of a close associationof feather growth dynamics and overall ornamentation identifythe proximate targets of selection for elaboration of sexualdisplays. Moreover, the close association of feather growthand pigmentation not only can reinforce condition-dependencein color displays, but can also enable phenotypic and geneticaccommodation of novel pigments into plumage displays providinga mechanism for the observed concordance of within-populationdevelopmental processes and between-population diversificationof color displays.     

Formation of spacing pattern and morphogenesis of chick feather buds is regulated by cytoskeletal structures

Chick feather buds develop sequentially in a hexagonal array. Each feather bud develops with anterior posterior polarity, which is thought to develop in response to signals derived from specialized regions of mesenchymal condensation and epithelial thickening. These developmental processes are performed by cellular mechanisms, such as cell proliferation and migration, which occur during chick feather bud development. In order to understand the mechanisms regulating the formation of mesenchymal condensation and their role in feather bud development, we explanted chick dorsal skin at stage HH29+ with cytochalasin D, which inhibits cytoskeletal formation. We show that the aggregation of mesenchymal cells can be prevented by cytochalasin D treatment in a concentration-dependent manner. Subsequently, cytochalasin D disrupts the spacing pattern and inhibits feather bud axis formation as well. In addition, expression patterns of Bmp-4 and Msx-2, key molecules for early feather bud development, were disturbed by cytochalasin D treatment. Our results fully indicate that both the cytoskeletal structure and cell activity via gene regulation are of fundamental importance in mesenchymal condensation leading to proper morphogenesis of feather bud and spacing pattern formation.     

Postnatal Dynamics of Developmental Stability and Canalization of Lizard Head Shape Under Different Environmental Conditions

Developmental stability (DS) and canalization are key determinants of phenotypic variation. To provide a better understanding of how postnatal growth is involved in determining the effects of DS and canalization on phenotypic variation, we studied within- and among-individual variation in head shape in ontogenetic series of lizards inhabiting urban and rural environments. Urban lizards exhibited increased fluctuating asymmetry during the early postnatal stages, but asymmetry levels decreased during growth. By contrast, asymmetry remained constant across the investigated size range in the rural population. In addition, urban juveniles were more variable for symmetric shape and deviated more from the group shape-size allometric trajectory, but both indices declined across ontogeny. Congruent patterns of within- and among-individual variation suggest that both DS and canalization may rely on similar underlying mechanisms. Further, the ontogenetic reduction of variation in the urban population suggests that compensatory growth may aid in buffering phenotypic variation and correcting deviances from the established developmental path. Alternatively, passive mechanisms and population dynamics may also explain the decrease of phenodeviants in urban populations. Significant correlations between symmetric and asymmetric shape, as well as similar integration patterns between the two populations, suggest that similar developmental mechanisms regulate head shape in both environments. Overall, these results highlight the relevance of both pre- and post-natal dynamics in determining levels of phenotypic variation, enhancing our understanding of how organisms respond to perturbations to DS and canalization under stressful conditions.     

Individual differences in developmental precision and fluctuating asymmetry: a model and its implications

In many studies, fluctuating asymmetry (FA) has been used as a measure of individual differences in developmental imprecision. A model of how variation in developmental imprecision is associated with variation in asymmetry is described and applied to important issues about FA. If individual differences in developmental imprecision exist, asymmetry due to developmental error should be leptokurtically distributed. Moreover, the greater the magnitude of individual differences, the greater the leptokurtosis. Asymmetry purportedly due to developmental error in a variety of species is indeed leptokurtically distributed. The level of leptokurtosis suggests that the CV in individual differences in underlying developmental imprecision is generally 20–25, consistent with it being a fitness trait. In addition, data suggest that: (1) the individual differences that underlie the developmental imprecision of different traits are largely shared across traits and not trait-specific; (2) the heritability of these individual differences may average between 35 and 55%, despite small heritabilities of individual trait FAs; and (3) correlations between FA and fitness traits or components suggest high correlations between underlying variation in developmental precision and fitness in many species. Theoretical implications are discussed.     

Developmental plasticity associated with early structural integration and evolutionary patterns: Examples of developmental bias and developmental facilitation in the skeletal system

The relation of developmental plasticity to evolutionary diversification is a key component of evolutionary theory involving developmental bias, but the basis of the relationship varies among traits and among taxa. Here I review some scenarios of how structural integration during early organogenesis could influence this relationship. When condensations are highly integrated and dependent on each other during early organogenesis, both plasticity and evolution are restricted, for example size proportions in molar tooth rows and phalanges within a digit. When similar condensations develop and remain separate (in tracheal cartilages and feather buds), they show high levels of variation and diversity in number but not in shape and size, at least at early stages. When non‐similar structures form separately and then integrate while still undergoing patterning, high levels of plasticity (in number, size, shape; in rib uncinate processes) or new dimensions of ecologically‐significant variation (cusp offset, in mammal teeth) are seen. Although each of these structural integration scenarios is unique, the modulation of evolvability is detectable and informative. Parsing the influence of structural integration at these developmental levels, rather than later‐stage structural correlations or only through genetic covariation, may be necessary to advance understanding of evolvability of the phenotype.     

Consequences of inter-population crosses on developmental stability and canalization of floral traits in Dalechampia scandens (Euphorbiaceae)

Congruence between changes in phenotypic variance and developmental noise in inter-population hybrids was analysed to test whether environmental canalization and developmental stability were controlled by common genetic mechanisms. Developmental stability assessed by the level of fluctuating asymmetry (FA), and canalization by the within- and among-individual variance, were measured on several floral traits of Dalechampia scandens (Euphorbiaceae). Hybridization affected canalization. Both within- and among-individual phenotypic variance decreased in hybrids from populations of intermediate genetic distance, and strongly increased in hybrids from genetically distant populations. Mean-trait FA differed among cross-types, but hybrids were not consistently more or less asymmetric than parental lines across traits. We found no congruence between changes in FA and changes in phenotypic variance. These results suggest that developmental stability (measured by FA) and canalization are independently controlled. This study also confirms the weak relationship between FA and the breakdown of coadapted gene complexes following inter-population hybridization.     

Population-level consequences of polymorphism, plasticity and randomized phenotype switching: a review of predictions

The consequences of among-individual phenotypic variation for the performance and ecological success of populations and species has attracted growing interest in recent years. Earlier reviews of this field typically address the consequences for population processes of one specific source of variation (plasticity or polymorphism), or consider one specific aspect of population performance, such as rate of speciation. Here we take a broader approach and study earlier reviews in order to summarize and compare predictions regarding several population-level consequences of phenotypic variation stemming from genetic polymorphism, developmental plasticity or randomized phenotype switching. Unravelling cause-dependent consequences of variation may increase our ability to understand the ecological dynamics of natural populations and communities, develop more informed management plans for protection of biodiversity, suggest possible routes to increased productivity and yield in natural and managed biological systems, and resolve inconsistencies in patterns and results seen in studies of different model systems. We find an overall agreement regarding the effects of higher levels of phenotypic variation generated by different sources, but also some differences between fine-grained and coarse-grained environments, modular and unitary organisms, mobile and sessile organisms, and between flexible and fixed traits. We propose ways to test the predictions and identify issues where current knowledge is limited and future lines of investigation promise to provide important novel insights.     

Quantitative genetics of plumage color: lifetime effects of early nest environment on a colorful sexual signal

Phenotypic differences among individuals are often linked to differential survival and mating success. Quantifying the relative influence of genetic and environmental variation on phenotype allows evolutionary biologists to make predictions about the potential for a given trait to respond to selection and various aspects of environmental variation. In particular, the environment individuals experience during early development can have lasting effects on phenotype later in life. Here, we used a natural full‐sib/half‐sib design as well as within‐individual longitudinal analyses to examine genetic and various environmental influences on plumage color. We find that variation in melanin‐based plumage color – a trait known to influence mating success in adult North American barn swallows (Hirundo rustica erythrogaster) – is influenced by both genetics and aspects of the developmental environment, including variation due to the maternal phenotype and the nest environment. Within individuals, nestling color is predictive of adult color. Accordingly, these early environmental influences are relevant to the sexually selected plumage color variation in adults. Early environmental conditions appear to have important lifelong implications for individual reproductive performance through sexual signal development in barn swallows. Our results indicate that feather color variation conveys information about developmental conditions and maternal care alleles to potential mates in North American barn swallows. Melanin‐based colors are used for sexual signaling in many organisms, and our study suggests that these signals may be more sensitive to environmental variation than previously thought.     

Feathers as a Tool to Assess Mercury Contamination in Gentoo Penguins: Variations at the Individual Level

Feathers have been widely used to assess mercury contamination in birds as they reflect metal concentrations accumulated between successive moult periods: they are also easy to sample and have minimum impact on the study birds. Moult is considered the major pathway for mercury excretion in seabirds. Penguins are widely believed to undergo a complete, annual moult during which they do not feed. As penguins lose all their feathers, they are expected to have a low individual-variability in feather mercury concentration as all feathers are formed simultaneously from the same somatic reserves. This assumption is central to penguin studies that use feathers to examine the annual or among-individual variation in mercury concentrations in penguins. To test this assumption, we measured the mercury concentrations in 3–5 body feathers of 52 gentoo penguins (Pygoscelis papua) breeding at Bird Island, South Georgia (54°S 38°W). Twenty-five percent of the penguins studied showed substantial within-individual variation in the amount of mercury in their feathers (Coefficient of Variation: 34.7–96.7%). This variation may be caused by differences in moult patterns among individuals within the population leading to different interpretations in the overall population. Further investigation is now needed to fully understand individual variation in penguins’ moult.     

The axolotl mutants

The Mexican axolotl (Ambystoma mexicanum) has enjoyed wide use in experimental embryology for over 100 yr. Its usefulness has been extended into the area of developmental genetics largely due to the contributions of R. Briggs and R. R. Humphrey at Indiana University. To date over 30 mutants have been described, almost all of which affect development. Some of these have been discovered in inbred strains while others have been uncovered in recent Mexican imports. These mutants can be subdivided into several major classes. Maternal effect mutations lead to deficiencies in informational, structural, or metabolic components of the egg essential to early development prior to the time at which the embryo's own genome becomes active. In contrast, the developmental lethals affect later stages in embryogenesis when both morphogenetic and biochemical events are determined exclusively by the genotype of the embryo. Most lead to death at about feeding stage. Some, the cell lethals, are believed to suffer from fundamental metabolic defects affecting all parts of the embryo. Others affect the development of specific organs or tissues. The developmental nonlethals also affect specific systems, but ones that are not essential to survival. Some affect the development and survival of pigment cells and these, along with isozyme variants, are useful as markers in developmental experiments. A number of the mutants have been studied in detail, but others scarcely at all. The purpose of this review is to bring them to the attention of all developmental biologists in the hope that their potential will be even more widely recognized.     

How can a character be developmentally constrained despite variation in developmental pathways?

A fundamental riddle of evolutionary developmental biology is the conservation of adult morphological patterns (Hall, 1992). Conservative patterns are either called body plans if they concern overall body design, or homologues if they concern parts of the body (Riedl, 1978; Roth, 1982; Sattler, 1984; Van Valen, 1982; Wagner, 1989a, 1989b). An adult pattern is considered conservative if it remains unchanged in spite of changes in function, as indicated by the original definition of homology by Owen, as a similarity of organs regardless of form and function (Owen, 1848). Conservation of anatomical features despite different adaptive pressures is naturally explained by developmental constraints (Wagner, 1986). However, this approach to explain the biological basis of homology is plagued by the fact that developmental pathways are often more variable than the characters that they produce (see Tab. 1) (Hall, 1992; Roth, 1988, 1991; Spemann, 1915; Wagner, 1989b). This is also true for any other application of the concept of developmental constraints. The widely held opinion that early stages of development are conservative because any early perturbation is likely to interfere with later development, is far from absolute, since a vast amount of data in comparative developmental biology speaks to developmental variation (see e.g. the examples in Tab. 1). The question then is, how can developmental constraints on adult variation be reconciled with the fact of developmental variation?     

数量性状发育遗传模型及其分析方法的研究进展

发育遗传模型是同时反映性状遗传和发育本质、提供影响遗传变异及调整发育进程的有关因素的信息的模型。建立在群体遗传学基础上的直接效应模型适用于单一基因控制的简单性状。渐成模型将遗传变异分解成直接分量和渐成分量(母体效应和互作效应),能更好地反映有机体遗传和发育的生物学机制。生长轨迹模型有效地综合了复杂性状各分量的发育动态,可获得连续的、综合的、详细的、动态的发育信息。条件遗传分析方法不仅可以估算特定时间段的净效应,且可将净效应分解为不同遗传分量,了解各效应分量的相对贡献。 Abstract：Developmental genetic models and analysis methods for quantitative traits are presented.Developmental genetic models should reflect the genetic and developmental essence,and provide the information of the factors influencing the genetic variation and the developmental process.Direct effect models,which based on the population genetics,may be suitable to analyze simple traits with single gene.Epigenetic models can decompose the whole genetic variation into direct and epigenetic components (maternal effects and epigenetic interaction effects),so that biological mechanism can be better understood.Growth trace models effectively synthesize the developmental dynamics of components of complex traits.With them,continuous,compositive,detailed,and dynamic information of development is available.Conditional analysis method can not only estimate the net effects in a specific time interval,but also depose them into genetic components and help to appreciate the contributions of different effects.     

Genetic structure of phenotypic robustness in the collaborative cross mouse diallel panel

Developmental stability and canalization describe the ability of developmental systems to minimize phenotypic variation in the face of stochastic micro‐environmental effects, genetic variation and environmental influences. Canalization is the ability to minimize the effects of genetic or environmental effects, whereas developmental stability is the ability to minimize the effects of micro‐environmental effects within individuals. Despite much attention, the mechanisms that underlie these two components of phenotypic robustness remain unknown. We investigated the genetic structure of phenotypic robustness in the collaborative cross (CC) mouse reference population. We analysed the magnitude of fluctuating asymmetry (FA) and among‐individual variation of cranial shape in reciprocal crosses among the eight parental strains, using geometric morphometrics and a diallel analysis based on a Bayesian approach. Significant differences among genotypes were found for both measures, although they were poorly correlated at the level of individuals. An overall positive effect of inbreeding was found for both components of variation. The strain CAST/EiJ exerted a positive additive effect on FA and, to a lesser extent, among‐individual variance. Sex‐ and other strain‐specific effects were not significant. Neither FA nor among‐individual variation was associated with phenotypic extremeness. Our results support the existence of genetic variation for both developmental stability and canalization. This finding is important because robustness is a key feature of developmental systems. Our finding that robustness is not related to phenotypic extremeness is consistent with theoretical work that suggests that its relationship to stabilizing selection is not straightforward.     

Variation patterns of bilateral characters: variation among characters and among populations in the White Sea herring, Clupea pallasi marisalbi (Berg) (Clupeidae, Teleosti)

Phenotypic variation in two populations of the White Sea herring Clupea pallasi marisalbi (Berg) (spring spawners and summer spawners), based on 21 meristic and 21 morphometric bilateral characters, has been studied. Total phenotypic variance was partitioned into a within-individual or stochastic component (fluctuating asymmetry) and an among-individual or factorial component, reflecting heterogeneity among individuals and resulting from the diversity of genotypes and environments. Both standardized stochastic and factorial components show clear negative correlations with means across characters. Negative correlation of the factorial components with means is in contradiction to the commonly accepted explanation of negative means-standardized variances association. Slopes of regression of standardized stochastic variances on means in meristic characters was significantly higher in summer spawners than in spring spawners, and results in discordance of stochastic variance across characters: it is higher in spring spawners for low and average variability characters and does not differ for both populations for high variability characters. The populations do not show notable differences in variation of morphometric characters. Consideration of other available data on these populations, such as spawning behaviour and salinity resistance of larvae, suggests that the lower slope of regression of stochastic variances on means is associated with the reduced viability of spring spawners     

Variations of Mesozoic feathers: Insights from the morphogenesis of extant feather rachises

The rachises of extant feathers, composed of dense cortex and spongy internal medulla, are flexible and light, yet stiff enough to withstand the load required for flight, among other functions. Incomplete knowledge of early feathers prevents a full understanding of how cylindrical rachises have evolved. Bizarre feathers with unusually wide and flattened rachises, known as “rachis-dominated feathers” (RDFs), have been observed in fossil nonavian and avian theropods. Newly discovered RDFs embedded in early Late Cretaceous Burmese ambers (about 99 million year ago) suggest the unusually wide and flattened rachises mainly consist of a dorsal cortex, lacking a medulla and a ventral cortex. Coupled with findings on extant feather morphogenesis, known fossil RDFs were categorized into three morphotypes based on their rachidial configurations. For each morphotype, potential developmental scenarios were depicted by referring to the rachidial development in chickens, and relative stiffness of each morphotype was estimated through functional simulations. The results suggest rachises of RDFs are developmentally equivalent to a variety of immature stages of cylindrical rachises. Similar rachidial morphotypes documented in extant penguins suggest that the RDFs are not unique to Mesozoic theropods, although they are likely to have evolved independently in extant penguins.