Control of pollen-mediated gene flow in transgenic trees

Pollen elimination provides an effective containment method to reduce direct gene flow from transgenic trees to their wild relatives. Until now, only limited success has been achieved in controlling pollen production in trees. A pine (Pinus radiata) male cone-specific promoter, PrMC2, was used to drive modified barnase coding sequences (barnaseH102E, barnaseK27A, and barnaseE73G) in order to determine their effectiveness in pollen ablation. The expression cassette PrMC2-barnaseH102E was found to efficiently ablate pollen in tobacco (Nicotiana tabacum), pine, and Eucalyptus (spp.). Large-scale and multiple-year field tests demonstrated that complete prevention of pollen production was achieved in greater than 95% of independently transformed lines of pine and Eucalyptus (spp.) that contained the PrMC2-barnaseH102E expression cassette. A complete pollen control phenotype was achieved in transgenic lines and expressed stably over multiple years, multiple test locations, and when the PrMC2-barnaseH102E cassette was flanked by different genes. The PrMC2-barnaseH102E transgenic pine and Eucalyptus (spp.) trees grew similarly to control trees in all observed attributes except the pollenless phenotype. The ability to achieve the complete control of pollen production in field-grown trees is likely the result of a unique combination of three factors: the male cone/anther specificity of the PrMC2 promoter, the reduced RNase activity of barnaseH102E, and unique features associated with a polyploid tapetum. The field performance of the PrMC2-barnaseH102E in representative angiosperm and gymnosperm trees indicates that this gene can be used to mitigate pollen-mediated gene flow associated with large-scale deployment of transgenic trees.     

Surveying of pollen-mediated crop-to-crop gene flow from a wheat field trial as a biosafety measure

Outcrosses from genetically modified (GM) to conventional crops by pollen-mediated gene flow (PMGF) are a concern when growing GM crops close to non-GM fields. This also applies to the experimental releases of GM plants in field trials. Therefore, biosafety measures such as isolation distances and surveying of PMGF are required by the regulatory authorities in Switzerland. For two and three years, respectively, we monitored crop-to-crop PMGF from GM wheat field trials in two locations in Switzerland. The pollen donors were two GM spring wheat lines with enhanced fungal resistance and a herbicide tolerance as a selection marker. Seeds from the experimental plots were sampled to test the detection method for outcrosses. Two outcrosses were found adjacent to a transgenic plot within the experimental area. For the survey of PMGF, pollen receptor plots of the conventional wheat variety Frisal used for transformation were planted in the border crop and around the experimental field up to a distance of 200 m. Although the environmental conditions were favorable and the donor and receptor plots flowered at the same time, only three outcrosses were found in approximately 185,000 tested seedlings from seeds collected outside the experimental area. All three hybrids were found in the border crop surrounding the experimental area, but none outside the field. We conclude that a pollen barrier (border crop) and an additional isolation distance of 5 m is a sufficient measure to reduce PMGF from a GM wheat field trial to cleistogamous varieties in commercial fields below a level that can be detected.     

Fragmentation can increase spatial genetic structure without decreasing pollen-mediated gene flow in a wind-pollinated tree

Fragmentation reduces population sizes, increases isolation between habitats and can result in restricted dispersal of pollen and seeds. Given that diploid seed dispersal contributes more to shaping fine-scale spatial genetic structure (SGS) than haploid pollen flow, we tested whether fine-scale SGS can be sensitive to fragmentation even if extensive pollen dispersal is maintained. Castanopsis sclerophylla (Lindley & Paxton) Schottky (Fagaceae), a wind-pollinated and gravity seed-dispersed tree, was studied in an area of southeast China where its populations have been fragmented to varying extents by human activity. Using different age classes of trees in areas subject to varying extents of fragmentation, we found no significant difference in genetic diversity between prefragmentation vs. postfragmentation C. sclerophylla subpopulations. Genetic differentiation among postfragmentation subpopulations was also only slightly lower than among prefragmentation subpopulations. In the most fragmented habitat, selfing rates were significantly higher than zero in prefragmentation, but not postfragmentation, cohorts. These results suggest that fragmentation had not decreased gene flow among these populations and that pollen flow remains extensive. However, significantly greater fine-scale SGS was found in postfragmentation subpopulations in the most fragmented habitat, but not in less fragmented habitats. This alteration in SGS reflected more restricted seed dispersal, induced by changes in the physical environments and the prevention of secondary seed dispersal by rodents. An increase in SGS can therefore result from more restricted seed dispersal, even in the face of extensive pollen flow, making it a sensitive indicator of the negative consequences of population fragmentation.     

Identification of a hybridization window that facilitates sizeable reductions of pollen-mediated gene flow in spring wheat

Transgenic wheat (Triticum aestivum L.) with improved agronomic traits is currently being field-tested. Gene flow in space is well-documented, but isolation in time has not received comparable attention. Here, we report the results of a field experiment that investigated reductions in intraspecific gene flow associated with temporal isolation of flowering between T. aestivum conspecifics. Pollen-mediated gene flow (PMGF) between an imazamox-resistant (IR) volunteer wheat population and a non-IR spring wheat crop was assessed over a range of volunteer emergence timings and plant population densities that collectively promoted flowering asynchrony. Natural hybridization events between the two populations were detected by phenotypically scoring plants in F₁ populations followed by verification with Mendelian segregation ratios in the F_1:2 lines. Based on the examination of >545,000 seedlings, we identified a hybridization window in spring wheat approximately 125 growing degree-days (GDD) in length. We found a sizeable reduction (two- to four-fold) in gene flow frequencies when flowering occurred outside of this window. The hybridization window identified in this research also will serve to temporally isolate neighboring wheat crops. However, strict control of volunteer populations or spatial isolation of neighbouring crops emerging within a 125 GDD hybridization window will be necessary to maintain low frequencies of PMGF in spring wheat fields. The model developed herein also is likely to be applicable to other wind-pollinated species.     

风向因素对转基因抗虫棉花基因漂移效率的影响

在转基因作物获准进行环境释放并实行大面积商品化推广的同时,基因漂移所引起的生态环境安全问题不容忽视。本研究以含有双价抗虫基因（Bt/CpTI）的转基因棉花SGK321为花粉供体材料,以常规非转基因棉花品种石远321、中棉35、吉扎1号为花粉受体材料,在温室中人工创造定向风和非定向风条件,应用PCR与蛋白检测相结合的方法,检测外源基因发生基因漂移的效率。结果表明：随着与转基因棉花SGK321距离的增加,外源基因转移至非转基因棉花的基因漂移频率呈现波动性变化。在定向风处理中,基因漂移频率在距离转基因棉花6.4 m处达到峰值33.33%,在测定范围内基因漂移最远距离为25.6 m;而在非定向风处理中,基因漂移频率在距离转基因棉花12.8 m处达到峰值36.67%,在测定范围内基因漂移最远距离为36 m。非定向风可显著提高转移至海岛棉吉扎1号的基因漂移频率。外源基因从SGK321转移至其非转基因亲本石远321的基因漂移频率显著高于转移至陆地棉中棉35和海岛棉吉扎1号的漂移频率。本研究可为转基因棉花的生态安全性分析提供一定的理论参考价值。     

Paternity analysis of pollen-mediated gene flow for Fraxinus excelsior L. in a chronically fragmented landscape

Paternity analysis based on microsatellite marker genotyping was used to infer contemporary genetic connectivity by pollen of three population remnants of the wind-pollinated, wind-dispersed tree Fraxinus excelsior, in a deforested Scottish landscape. By deterministically accounting for genotyping error and comparing a range of assignment methods, individual-based paternity assignments were used to derive population-level estimates of gene flow. Pollen immigration into a 300 ha landscape represents between 43 and 68% of effective pollination, mostly depending on assignment method. Individual male reproductive success is unequal, with 31 of 48 trees fertilizing one seed or more, but only three trees fertilizing more than ten seeds. Spatial analysis suggests a fat-tailed pollen dispersal curve with 85% of detected pollination occurring within 100 m, and 15% spreading between 300 and 1900 m from the source. Identification of immigrating pollen sourced from two neighbouring remnants indicates further effective dispersal at 2900 m. Pollen exchange among remnants is driven by population size rather than geographic distance, with larger remnants acting predominantly as pollen donors, and smaller remnants as pollen recipients. Enhanced wind dispersal of pollen in a barren landscape ensures that the seed produced within the catchment includes genetic material from a wide geographic area. However, gene flow estimates based on analysis of non-dispersed seeds were shown to underestimate realized gene immigration into the remnants by a factor of two suggesting that predictive landscape conservation requires integrated estimates of post-recruitment gene flow occurring via both pollen and seed.     

To nest communally or not to nest communally: a review of rodent communal nesting and nursing

Communal nesting, the sharing of parental responsibilities between multiple individuals in a nest, is common in many rodents. Upon first glance, this behaviour seems to be selectively disadvantageous. Communal care not only involves energetic costs, but may also be subject to cheating behaviour. Despite abundant literature, many questions remain regarding advantages gained by females that form nesting groups. I discuss the communal nesting of eusocial, singular and plural breeding rodents. I first clarify the distinction between communal nesting and thermoregulatory huddling. I then review two major groups of hypotheses ('ecological constraints' and 'benefits of philopatry') that are used to explain the occurrence of communal nesting in rodents. Most likely, these hypotheses are not mutually exclusive. Regardless of the main selective pressure(s) acting on communal nesting, the indirect components of inclusive fitness that result from nest sharing most likely influence the formation and maintenance of communal nests. Communal nesting and nursing (the sharing of milk with nonoffspring) are under different selective regimes and thus, must be evaluated separately. I review adaptive and nonadaptive hypotheses for rodent communal nursing. I argue that communal nursing may not be adaptive as mothers may be forced to share milk with nonoffspring in large communal nests (i.e. communal nursing may be a cost associated with communal nesting). In conclusion, I propose directions for future study that may improve our understanding of communal nesting and nursing in the wild. Copyright 2000 The Association for the Study of Animal Behaviour.     

Mating patterns and gene flow in the neotropical epiphytic orchid, Laelia rubescens

Understanding mating patterns and gene movement in plant populations occupying highly disturbed landscapes is essential for insights into their long-term survival. We used allozyme genetic markers to examine mating patterns and to directly measure pollen flow in the Central American epiphytic orchid, Laelia rubescens. Study populations were located in disturbed, seasonally dry tropical forest in Costa Rica. Every flowering individual within 15 populations and 12-18 seedlings from each maternal individual were genotyped over two reproductive seasons. Strict correlated mating by orchids produces full-sib progeny arrays from which the multilocus diploid genotype of the pollen parent can be inferred. These paternity analyses produced detailed quantitative estimates of pollen movement within and among populations of this species. Although our data illustrate that mating patterns vary spatially and temporally among trees, among pastures, and between years, overall patterns were surprisingly consistent. Thirty-four per cent of the capsules produced in both years resulted from gene flow events. Where pollen parents were identified, pollen moved mean distances of 279 m and 519 m in 1999 and 2000 respectively and a maximum documented distance of 1034 m. A substantially larger floral display in 2000 corresponded to a marked increase in pollen dispersal distances. Smaller populations, which more closely resembled those in undisturbed forest, had higher rates of gene flow than the large populations that characterize disturbed sites. We predict the occurrence of greater gene flow between low-density populations occupying undisturbed habitats.     

Viability and sunlight sensitivity of oak pollen and its implications for pollen-mediated gene flow

Pollen-mediated gene flow and the male reproductive success of wind-pollinated trees depend on the initial viability of the pollen and the changes that occur in its viability during transport in the atmosphere. The viability of Quercus robur pollen was determined before and during exposure to sunlight by in vitro germination and the fluorescein diacetate reaction (FCR) in 2002 and 2003, respectively. These experiments allowed us to calculate initial pollen viability and pollen sensitivity to sunlight. The germination test revealed a lower initial pollen viability (25–65%) than the FCR (53–92%). Following 9.5 h of irradiation the viability was reduced to 75–100% as determined by the in vitro germination test or to 40–70% as determined by the FCR. The actual values of initial pollen viability and pollen sensitivity to sunlight were used to define a range of values for modelling pollen dispersal using the mesoscale meteorological model METRAS. The deposition patterns of viable pollen varied by as much as a factor of 14 by changing the viability parameters in the range of the observed values. This suggests significant differences in male reproductive success. Variations in initial pollen viability have stronger effects on the gene-flow pattern than do variations in pollen sensitivity to sunlight. In particular, pollen distribution throughout the local environment is shaped by the initial pollen viability, while pollen sensitivity to sunlight mainly influences long-distance pollen dispersal.This revised version was published online in February 2005 with corrections to an incorrect sentence in the Results section. Under Pollen Sensitivity it should read: decreased faster when assessed by the germination test than by the FCR.     

To be or not to be a hamlet pair in sympatry

Recent adaptive radiations, such as the fringillid finches on the Galapagos archipelago or the cichlid fishes in the East African Great Lakes, are invaluable model systems for evolutionary and ecological research. Puebla et al. , in this issue of Molecular Ecology , have established a group of colourful coral reef fishes from the Caribbean sea for studying the early phases of species formation in a marine adaptive radiation. It appears that local evolutionary processes are important in this system, which might have even triggered in situ speciation.     

To replicate,or not to replicate – that should not be a question

Recent simulations suggest that ecologists can enhance the predictive ability of models by designing experiments that maximise the number of levels of an experimental factor by sacrificing replication. Here, I describe how these simulations were based on a faulty metric of prediction success and reinforce the importance of replication.     

Extensive contemporary pollen-mediated gene flow in two herb species,Ranunculus bulbosus and Trifolium montanum,along an altitudinal gradient in a meadow landscape

Background and Aims

Genetic connectivity between plant populations allows for exchange and dispersal of adaptive genes, which can facilitate plant population persistence particularly in rapidly changing environments.

Methods

Patterns of historic gene flow, flowering phenology and contemporary pollen flow were investigated in two common herbs, Ranunculus bulbosus and Trifolium montanum, along an altitudinal gradient of 1200–1800 m a.s.l. over a distance of 1 km among five alpine meadows in Switzerland.

Key Results

Historic gene flow was extensive, as revealed by F_st values of 0·01 and 0·007 in R. bulbosus and T. montanum, respectively, by similar levels of allelic richness among meadows and by the grouping of all individuals into one genetic cluster. Our data suggest contemporary pollen flow is not limited across altitudes in either species but is more pronounced in T. montanum, as indicated by the differential decay of among-sibships correlated paternity with increasing spatial distance. Flowering phenology among meadows was not a barrier to pollen flow in T. montanum, as the large overlap between meadow pairs was consistent with the extensive pollen flow. The smaller flowering overlap among R. bulbosus meadows might explain the slightly more limited pollen flow detected.

Conclusions

High levels of pollen flow among altitudes in both R. bulbosus and T. montanum should facilitate exchange of genes which may enhance adaptive responses to rapid climate change.     

Estimates of gene flow in forest trees

Qualitative and quantitative estimates of gene flow were obtained for fourteen gymnosperm and seven angiosperm forest tree species. High levels of gene flow were prevalent among gymnosperms while these levels varied from high to low among angiosperms. In both groups, species with greater pollen dispersal abilities appear to maintain high levels of gene flow. A detailed analysis of population structure in relation to gene flow was carried out on a gymnosperm species (Pinus rigida) and two angiosperm subspecies (Eucalyptus caesia ssp. caesia and ssp. magna). The results suggested that populations of many species may be concatenated systems bound by gene flow, and the overall levels of gene flow may be influenced by either single or clusters of populations. Different levels of gene flow was found between two closely related species of E. caesia growing under similar ecological conditions, suggesting a plausible link between pollinator behaviour and pollen flow.     

To be or not to be in the nucleolus

Compartmentalization has long been known to have a key role in regulation of cellular processes. By keeping enzymes and regulatory complexes in compartments where the delivery of substrate or exit of product is controlled, competing reactions can occur simultaneously in different parts of the cell. Moreover, spatial confinement facilitates the working of molecules participating in reaction chains and is crucial for coupling unfavourable with energetically favourable chemical reactions. Although in many cases intracellular compartmentalization relies on boundaries imposed by membranes, several non-membrane-bounded compartments exist in eukaryotic cells. One of these, the nucleolus, has recently attracted much attention. The emerging view is that molecular confinement in the nucleolus actively contributes to the control of cellular survival and proliferation.