Root growth in biopores—evaluation with in situ endoscopy

Background and aims

The significance of biopores for nutrient acquisition from the subsoil depends on root-soil contact, which in turn is influenced by root architecture. The aim of this study was to detect differences regarding the architecture and root-soil contact of homorhizous barley roots (Hordeum vulgare L.) and allorhizous oilseed rape roots (Brassica napus L.) growing in biopores.

Methods

In situ endoscopy was used as a technique that allows non-destructive display of pore wall characteristics and root morphology inside large biopores under field conditions.

Results

For both crops, about 85 % of all roots did establish contact to the pore wall. However, according to their different root architecture, the two crops varied in their strategy of resource acquisition: While barley was characterized by thin vertical or ingrowing roots, most of them in direct contact to the pore wall, oilseed rape established contact to the pore wall predominantly via lateral roots.

Conclusions

Root morphological and pore wall assessment with in situ endoscopy in combination with detailed studies of soil biochemical and soil physical parameters of the pore wall is considered an essential prerequisite for more precise future modelling of nutrient acquisition and uptake.     

Soil structure and plant growth: Impact of bulk density and biopores

Compacted soils are not uniformly hard; they usually contain structural cracks and biopores, the continuous large pores that are formed by soil fauna and by roots of previous crops. Roots growing in compacted soils can traverse otherwise impenetrable soil by using biopores and cracks and thus gain access to a larger reservoir of water and nutrients. Experiments were conducted in a growth chamber to determine the plant response to a range of uniform soil densities, and the effect of artificial and naturally-formed biopores. Barley plants grew best at an intermediate bulk density, which presumably represented a compromise between soil which was soft enough to allow good root development but sufficiently compact to give good root-soil contact. Artificial 3.2 mm diameter biopores made in hard soil gave roots access to the full depth of the pot and were occupied by roots more frequently than expected by chance alone. This resulted in increased plant growth in experiments where the soil was allowed to dry. Our experiments suggest that large biopores were not a favourable environment for roots in wet soil; barley plants grew better in pots containing a network of narrow biopores made by lucerne and ryegrass roots, responded positively to biopores being filled with peat, and some pea radicles died in biopores. A theoretical analysis of water uptake gave little support to the hypothesis that water supply to the leaves was limiting in either very hard or very soft soil. The net effect of biopores to the plant would be the benefits of securing extra water and nutrients from depth, offset by problems related to poor root-soil contact in the biopore and impeded laterals in the compacted biopore walls.     

一种由粉红粘帚霉引起的青稞根腐病

[背景]根腐病在青稞生产中的危害日趋严重,阻碍了青稞根腐病的有效防控及青海省青稞产业的发展。然而人们对青稞根腐病的研究甚少且病原菌不详。[目的]明确青稞根腐病发生的危害、病原及致病性,为青稞根腐病的防控提供理论依据。[方法]采用常规的组织分离法分离青稞根腐病病原,通过形态鉴定与分子鉴定结合的方法对病原进行鉴定,并采用烧杯水琼脂法测定其致病性。[结果]共分离得到4株青稞根腐病病原菌,鉴定为Clonostachys rosea,有较强的致病性且致病性差异显著,经柯赫氏法则验证为青稞根腐病病原菌,并且是一种新的青稞根腐病病原,该类根腐病也是一种新的根腐类病害,在国内外属首次发现。[结论]Clonostachys rosea可引起青稞根腐病且致病性强。     

广西葛根内生细菌的分离鉴定及其促生特性

【背景】植物内生菌长期与宿主共生,对宿主生长发育产生影响。葛根作为重要的药食两用作物,葛根内生菌的研究具有重要实践意义。【目的】对广西葛根根部内生细菌进行分离、鉴定及促植物生长特性分析,旨在了解该药食同源植物内生细菌种群结构及其促生特性,为分析内生菌群体在药食同源植物产量和品质形成的作用及其内生细菌资源的开发利用提供参考。【方法】采用6种不同的培养基从广西葛根的根瘤、根系和根愈伤组织分离内生细菌,16S rRNA基因测序和系统发育分析内生细菌的分布特征和遗传多样性,采用生理生化方法测定分离菌株的固氮活性、溶磷特性、产生嗜铁素、分泌吲哚乙酸(indole-3-aceticacid,IAA)等促生特性。【结果】从葛根根瘤、根系和根部愈伤组织中共分离得到223个菌株,16S rRNA基因测序鉴定这些菌株隶属于2门4纲10科19属,其中芽孢杆菌属、假单胞菌属、土壤杆菌属、肠杆菌属为葛根优势菌群;内生细菌数量和群落组成存在明显的组织特异性,其数量表现为根瘤>根系>根愈伤组织,但其种群多样性表现为根愈伤组织>根系>根瘤。不同培养基分离出的细菌种群丰富度有差异。从供试菌株中筛...     

自然林下与田间根腐三七根际微生物群落特征及比较分析

【背景】三七根际微生物群落特征与其土传根腐病害密切相关,而针对自然林下根腐三七的相关研究鲜见报道。【目的】比较分析自然林下与田间根腐三七根际土壤微生物群落的组成特征,结合土壤理化性质与酶活性分析,为三七根腐病害防治与仿野生栽培提供科学依据。【方法】采集自然林下与田间根腐三七根际土壤,利用高通量测序技术,分析土壤细菌与真菌群落的物种组成与多样性,并测定土壤理化性质和酶活性。【结果】自然林下与田间根腐三七根际土壤中细菌和真菌群落组成具有明显差异,自然林下根腐三七根际土壤中担子菌门(Basidiomycota)、酸杆菌门(Acidobacteria)和疣微菌门(Verrucomicrobia)的相对丰度较高,而田间根腐三七根际土壤中子囊菌门(Ascomycota)、变形菌门(Proteobacteria)和绿弯菌门(Chloroflexi)的相对丰度较高。在属分类水平,镰刀菌属(Fusarium)是自然林下根腐三七根际土壤中的优势菌群,相对丰度为17.30%,而癣囊腔菌属(Plectosphaerella)是田间根腐三七根际土壤中的优势菌群,相对丰度为22.55%;Candidatus Ba...     

Seasonal patterns of root production of Japanese oak seedlings and dwarf bamboo grown in rhizoboxes

Abstract

We separately examined the temporal patterns of root production by Japanese oak (Quercus crispula) and dwarf bamboo (Sasa veitchii), which is a major understory species in cool temperate forests. We grew Japanese oak seedlings and Sasa stocks (i.e., the rhizome and connected culms) in organic‐free sand in rhizoboxes and then scanned roots that were visible through the sides of the rhizoboxes to measure the length of each root in images. Japanese oak root production peaked in July, but Sasa root production peaked in both July and October. Soil temperature was highly correlated with root production of Japanese oak, but less so with Sasa root. Leaves of Sasa expanded in late summer, and the photosynthetic rate of Sasa was highest in September, suggesting that the aboveground phenology influences the extensive root production of Sasa in October due to the supply of carbohydrate. These results demonstrate different temporal patterns of root production by Japanese oak seedlings and understory species (Sasa), even under similar environmental conditions.     

草假单胞菌HT1在蚕豆根和茎的定殖特性及对内生细菌多样性的影响

[背景] 关于蚕豆内生生防细菌的定殖规律及其对内生细菌微生物多样性的研究鲜有报道。[目的] 明确草假单胞菌HT1在蚕豆的定殖特性以及对根茎部内生细菌群落多样性的影响。[方法] 采用抗生素标记法测定菌株HT1的定殖特性,利用高通量测序技术分析该菌灌根处理与对照处理蚕豆根茎部内生细菌的群落多样性。[结果] 菌株HT1的定殖数量为根>茎>叶,呈先升后降的趋势,根部、茎部、叶部在第7天达到最大值,在第83天仍能检测到标记菌株。灌根处理降低了内生细菌的丰富度,提高了根内生细菌物种多样性;灌根处理组根部厚壁菌门、放线菌门、拟杆菌门丰度显著提高,茎部变形菌门的相对丰度有所升高但无显著影响;在属水平上,灌根处理后,根部如Romboutsia、Mitsuaria、乳杆菌属、德沃斯氏菌属等属的相对丰度明显升高,茎部假单胞菌、Muribaculaceae、Elstera、鞘氨醇单胞菌属等属的相对丰度明显升高。[结论] HT1菌株能在蚕豆植株体内定殖达83 d以上,并且可以影响蚕豆植株内部的微生物群落结构组成,提高相关微生物的相对丰度。     

沙棘通过自主选择塑造根瘤内生微生物组

【背景】解析植物微生物群落结构是利用微生物组工程强化植物抗生物和非生物胁迫水平、提高农林产品质量和品质的基础。固氮根瘤是沙棘具有抗旱、抗寒和抗贫瘠等多种优良生物性状的关键。【目的】比较分析沙棘根际土和根瘤内细菌群落结构的组成及影响因素,为揭示沙棘-弗兰克氏菌共生和植物-微生物互作协同抗逆机制提供理论基础。【方法】从辽宁、陕西和山西采集样品,通过16SrRNA基因V3–V4可变区的高通量测序技术,采用生物信息学方法比较分析沙棘根际土和根瘤内细菌群落组成和丰度差异,并探索土壤土理化性质对根际土细菌群落结构的影响。【结果】沙棘根际土和根瘤内的细菌群落均以放线菌门(Actinobacteria)和变形菌门(Proteobacteria)为主要优势菌门,且根瘤内弗兰克氏菌属(Frankia)为绝对优势菌属;根际土前10个优势菌门的丰度在三地样品间均存在显著差异,仅存在唯一共有的优势菌属(鞘氨醇单胞菌属,Sphingomonas),且前35个优势属中有27个属在三地间存在明显丰度差异;土壤pH和速效钾是沙棘根际土细菌群落多样性的主要影响因子;根瘤内优势门和属在三省份间存在高度的保守性,仅异根瘤菌属...     

Impact of the TaMATE1B gene on above and below-ground growth of durum wheat grown on an acid and Al3+-toxic soil

Background and aims

Subsoil acidity with a high aluminium (Al³⁺) soil content inhibits root growth and proliferation of durum wheat (tetraploid AABB, Triticum turgidum) leading to poor nutrient and water uptake. This study evaluated the impact of Al³⁺-tolerantTaMATE1B allele on root and shoot traits of durum wheat grown in an acidic soil with a high Al³⁺concentration.

Methods

Two durum wheat lines, Jandaroi–TaMATE1B with the TaMATE1B gene introgressed from Al³⁺-tolerant bread wheat and Jandaroi–null (a sister line lacking the Al³⁺-tolerant TaMATE1B allele), were grown in rhizoboxes in a glasshouse. We mapped root growth and proliferation over time and measured shoot traits and grain yield.

Results

Introgression of the Al³⁺-tolerant TaMATE1B allele into durum wheat enabled root growth and proliferation below 0.25 m of the soil profile, where the soil pH was low (4.1, CaCl₂ extract) with high Al³⁺ content (16.5 mg kg⁻¹), and increased total root length and biomass at 42 days after sowing (DAS; Z₃₃) by 38.3 and 22%, respectively, relative to the Jandaroi–null. Differences in root growth between the two lines were apparent from tillering stage (Z₃₃) and by 50% anthesis (Z₆₄), respectively. Jandaroi–TaMATE1B had 69.2% greater root biomass, 76.2% greater root length, 5.89% greater leaf area and 18% greater shoot biomass than Jandaroi–null at 50% anthesis (Z₆₄). Time to anthesis and physiological maturity was delayed 6–7 days in Jandaroi–TaMATE1B, compared to Jandaroi–null. Jandaroi–TaMATE1B tended to have relatively greater, but not significantly different, shoot biomass, grain yield and yield components than Jandaroi–null.

Conclusions

Introgression of the Al³⁺-tolerant TaMATE1B allele into durum wheat enabled root growth and proliferation down an acidic soil profile with a high Al³⁺ concentration. We assume that in the field where plants need to acquire water at depth differences in above-ground parameters would be amplified.

     

Assessment of three strategies for the management of Meloidogyne arenaria on carrot in Mexico using Pochonia chlamydosporia var. mexicana under greenhouse conditions

Three control strategies for management of Meloidogyne arenaria were evaluated on carrot under greenhouse conditions. The control strategies tested were: i) incorporation of fresh broccoli; ii) carbofuran (Furadan®); and iii) Pochonia chlamydosporia var. mexicana, isolate Pcp21. Each strategy was evaluated separately and in combination (16 treatment combinations), each with three replicates. The experiment was done between February and April 2014 and repeated over the same time period in 2015. Each replicate experimental unit consisted of a 1?kg pot filled with tyndallised soil, to which broccoli, fungus and carbofuran were added according to treatment. Carrot seeds were sown into each pot and inoculated with M. arenaria eggs according to treatment. Pots were then maintained in the glasshouse for 12 weeks at 25?±?5°C. After this time the fresh root weight, root length, percent reduction in root galling, P. chlamydosporia var. mexicana colony forming units (CFU)/g of soil, and CFU/g root were all measured. Results showed that isolate Pcp21 of P. chlamydosporia var. mexicana significantly reduced root galling percentage by 50 and 78% in 2014 and 2015, respectively. Application of the fungus in combination with broccoli or carbofuran also reduced root galling. The number of CFU/ g of soil or root remained the same over the 12 weeks of the experiment. This isolate of P. chlamydosporia significantly reduced damage caused by M. arenaria on carrot and is a promising agent for management of this nematode.     

Aboveground resource allocation in response to root herbivory as affected by the arbuscular mycorrhizal symbiosis

Aims

Arbuscular mycorrhizal (AM) fungi associate with the majority of terrestrial plants, influencing their growth, nutrient uptake and defence chemistry. Consequently, AM fungi can significantly impact plant-herbivore interactions, yet surprisingly few studies have investigated how AM fungi affect plant responses to root herbivores. This study aimed to investigate how AM fungi affect plant tolerance mechanisms to belowground herbivory.

Methods

We examined how AM fungi affect plant (Saccharum spp. hybrid) growth, nutrient dynamics and secondary chemistry (phenolics) in response to attack from a root-feeding insect (Dermolepida albohirtum).

Results

Root herbivory reduced root mass by almost 27%. In response, plants augmented investment in aboveground biomass by 25%, as well as increasing carbon concentrations. The AM fungi increased aboveground biomass, phosphorus and carbon. Meanwhile, root herbivory increased foliar phenolics by 31% in mycorrhizal plants, and increased arbuscular colonisation of roots by 75% overall. AM fungi also decreased herbivore performance, potentially via increasing root silicon concentrations.

Conclusions

Our results suggest that AM fungi may be able to augment plant tolerance to root herbivory via resource allocation aboveground and, at the same time, enhance plant root resistance by increasing root silicon. The ability of AM fungi to facilitate resource allocation aboveground in this way may be a more widespread strategy for plants to cope with belowground herbivory.

     

Microconidia germination of the tomato pathogen Fusarium oxysporum in the presence of root exudates

Abstract

In this study we assessed microconidia germination of the tomato pathogens F. oxysporum f. sp. lycopersici (Fol) and F. oxysporum f. sp. radicis-lycopersici (Forl) in the presence of root exudates. Tomato root exudates stimulated microconidia germination and the level of stimulation was affected by plant age. Treatment of root exudates with insoluble polyvinylpolypyrrolidone, which binds phenolic compounds, indicated that tomato root exudates contain phenolic compounds inhibitory to F. oxysporum microconidia germination. Our study indicates that tomato root exudates similarly stimulate microconidia germination of both Fol and Forl. However, individual F. oxysporum strains differ in the degree of germination response to the root exudates. Furthermore, root exudates from non-host plants also contain compounds that stimulate microconidia germination of Fol. In general, the effects of root exudates from non-host plants did not differ considerably from those of tomato. The ability of phenolic compounds to inhibit germination of Fol seems not to be plant-specific.     

PRPs localized to the middle lamellae are required for cortical tissue integrity in Medicago truncatula roots

Key message

A family of repetitive proline-rich proteins interact with acidic pectins and play distinct roles in legume root cell walls affecting cortical and vascular structure.

Abstract

A proline-rich protein (PRP) family, composed of tandemly repeated Pro-Hyp-Val-X-Lys pentapeptide motifs, is found primarily in the Leguminosae. Four distinct size classes within this family are encoded by seven tightly linked genes: MtPRP1, MtPRP2 and MtPRP3, and four nearly identical MtPRP4 genes. Promoter fusions to β-glucuronidase showed strong expression in the stele of hairy roots for all 4 PRP genes tested, with additional expression in the cortex for PRP1, PRP2 and PRP4. All except MtPRP4 are strongly expressed in non-tumorous roots, and secreted and ionically bound to root cell walls. These PRPs are absent from root epidermal cell walls, and PRP accumulation is highly localized within the walls of root cortical and vascular tissues. Within xylem tissue, PRPs are deposited in secondary thickenings where it is spatially exclusive to lignin. In newly differentiating xylem, PRPs are deposited in the regularly spaced paired-pits and pit membranes that hydraulically connect neighboring xylem elements. Hairpin-RNA knock-down constructs reducing PRP expression in Medicago truncatula hairy root tumors disrupted cortical and vascular patterning. Immunoblots showed that the knockdown tumors had potentially compensating increases in the non-targeted PRPs, all of which cross-react with the anti-PRP antibodies. However, PRP3 knockdown differed from knockdown of PRP1 and PRP2 in that it greatly reduced viability of hairy root tumors. We hypothesize that repetitive PRPs interact with acidic pectins to form block-copolymer gels that can play distinct roles in legume root cell walls.

     

醋酸钙不动杆菌对盐碱胁迫下达乌里胡枝子促生效应研究

达乌里胡枝子(Lespedezadavurica)是黄土高原地区重要的生态修复草种,但土壤盐碱化极大影响了达乌里胡枝子的生长,制约了其经济和生态价值。接种根际促生菌剂是提高植物对盐碱胁迫抗性的重要途径。【目的】验证醋酸钙不动杆菌(Acinetobacter calcoaceticus)对盐碱胁迫下达乌里胡枝子幼苗和成株的促生效应,初步揭示其促进豆科植物生长的潜在机理,为田间应用提供理论依据。【方法】采用解钾培养基对2株达乌里胡枝子根际分离的醋酸钙不动杆菌的解钾能力进行测定;采用液体发酵法对菌株分泌铁载体、吲哚乙酸(indole-3-acetic acid, IAA)的能力进行定量测定;分别在培养皿和盆栽条件下,验证菌株的促生能力及其机制。【结果】菌株DP25和DP27具有解钾和分泌铁载体、IAA的能力,其中相对铁载体表达量值(siderophore, SU)分别为53.13%和86.67%,IAA含量分别为1.01 mg/L和17.31 mg/L;菌株DP25显著提高了培养皿中达乌里胡枝子幼苗的茎长和根长;菌株DP25和DP27对盐碱胁迫下达乌里胡枝子成株的光合色素合成及其光合作用产生...     

Resprouting of <Emphasis Type="Italic">Echinacea angustifolia</Emphasis> Augments Sustainability of Wild Medicinal Plant Populations

Resprouting of Echinacea angustifolia Augments Sustainability of Wild Medicinal Plant Populations. Overharvest of wild Echinacea species root has been a significant concern to the herbal industry. Harvesters of wild Echinacea angustifolia showed us that even after harvesting the top 15 to 20 cm of root, some plants resprout. We marked locations of harvested plants at sites in Kansas and Montana and reexamined them two years later to see if they resprouted from remaining root reserves. Approximately 50% of the roots resprouted at both Kansas and Montana sampling sites, despite droughty weather conditions in Montana. The length of root harvested significantly affected the ability of the plant to resprout. Those plants that were more shallowly harvested and had less root length removed were more likely to resprout. These data indicate that echinacea stands can recover over time from intensive harvest if periods of nonharvest occur. Our echinacea harvest study emphasizes that the entire biology of medicinal plants must be considered when evaluating their conservation status.     

甘肃马先蒿不同寄生密度对紫花针茅内生真菌共生体生理特性的影响

【目的】根寄生植物持续掠夺禾草体内营养物质成为禾草生长过程中的生物逆境,禾草内生真菌提高冷季型禾草对生物和非生物逆境耐受能力。然而,有关禾草内生真菌对根寄生逆境下禾草生理过程调控作用的研究鲜有报道。【方法】开展温室盆栽试验,以带菌(E+)和不带菌(E-)紫花针茅为研究对象,研究甘肃马先蒿不同寄生密度对紫花针茅抗氧化酶活性、渗透调节物质和根系活力影响的动态变化规律。【结果】甘肃马先蒿寄生显著增加紫花针茅抗氧化酶活性、丙二醛和脯氨酸含量,而根系活力却快速降低;高密度寄生紫花针茅植株生理特性指标显著高于低密度寄生或自然生长植株;同时,E+紫花针茅抗氧化酶活性、脯氨酸含量和根系活力显著高于E-植株,而E-植株丙二醛含量显著高于E+植株。【结论】禾草内生真菌通过增强抗氧化酶活性、调节细胞膜透性和增强根系生长能力的途径提高紫花针茅对根寄生逆境的耐受能力,利用植物替代方法带菌紫花针茅可以作为一种生物防治手段用于防控根寄生杂草。     

连作花魔芋软腐病株与健株根域丛枝菌根真菌群落多样性

【目的】解析不同连作年限花魔芋软腐病株、健株根域的丛枝菌根真菌(arbuscular mycorrhizal fungi,AMF)群落多样性。【方法】使用AMF 18S SSU rRNA基因特异引物AMV4.5NF/AMDGR对正茬及连作2年和3年的软腐病株、健株魔芋根系和根际土壤DNA扩增建库,通过高通量测序和生物信息学分析探究魔芋软腐病与其根域AMF群落多样性的关系。【结果】魔芋根系具有明显的AMF菌丝、泡囊和丛枝等结构。在相同连作年限条件下,健株根系AMF总侵染率、侵染强度和孢子密度均显著高于病株(P<0.05);在不同连作年限条件下,病株根系AMF总侵染率和侵染强度随连作年限延长而降低。从所有样品中共鉴定到9属53种AMF,其中有49个已知种和4个新种。球囊霉属(Glomus)和类球囊霉属(Claroideoglomus)是AMF群落的优势属,其AMF种分别占总AMF种数的41.5%和26.4%;丰度最高的Paraglomus sp.VTX00308是所有样品的共有种。连作、软腐病及二者的交互作用显著影响根系AMF群落的Shannon指数和Simpson指数及根际土壤AMF的Chao1指数(P<0.05)。通过丰度差异分析发现6个在连作软腐病发生后丰度差异显著的AMF种(P<0.05);NMDS分析表明,不同连作年限的魔芋软腐病株与健株之间的根域AMF菌种组成、相对丰度和群落结构存在差异。相关性分析表明,软腐病发病率和病情指数与魔芋根系和根际土壤AMF的Shannon指数、根系AMF的Chao1和Simpson指数以及AMF总侵染率、侵染强度和孢子密度极显著负相关(P<0.01)。【结论】比对健株,连作魔芋软腐病株根际土壤AMF孢子密度以及根系AMF侵染率、种数和多样性均降低,其群落结构显著改变。     

复合菌剂调控连作当归根围土壤养分及对产量的影响

【背景】连作可引起微生物群落结构失调,导致土壤环境恶化、养分循环不畅、当归[Angelica sinensis (Oliv.) Diels]产量降低,通过现代微生物技术改良土壤、消减连作障碍势在必行。【目的】于大田条件下,研究施用复合菌剂对当归根围土壤酶活、速效养分及产量的影响,明确增产机制,改进增产措施。【方法】利用溶磷圈法检测不同菌株溶磷活性、乙炔还原法检测固氮活性、试剂盒法检测过氧化物酶和硝化能力;复合菌剂T1[荧光假单胞菌(Pseudomonas fluorescens)CBS5、产碱假单胞菌(Pseudomonas alcaligenes) CBS7、嗜冷假单胞菌(Pseudomonas extremaustralis)CBSB、生枝动胶菌(Zoogloea ramigera) CBS4]和T2 (荧光假单胞菌CBS5、产碱假单胞菌CBS7、嗜冷假单胞菌CBSB)及对照CK (无菌马铃薯葡萄糖肉汤培养基)分别处理连作当归,分光光度法测定根围土壤及根中养分循环、转化相关酶活,氮、磷、钾速效养分含量;常规方法测产量;统计软件进行相关数据方差分析和主成分分析。【结果】产碱假单胞菌C...     

内生真菌KLBMP0506对拟南芥的促生作用

【目的】研究植物内生菌Wickerhamomyces sp.KLBMP0506对拟南芥（Arabidopsis thaliana）的促生作用及潜在的促生机制。【方法】本研究以野生型拟南芥为试验材料,将其与菌株KLBMP0506进行平板共培养及盆栽接种试验,并测定拟南芥鲜重、干重、主根长、侧根数、叶绿素含量和可溶性糖含量等生长、生理指标,同时对筛选的与拟南芥侧根、主根形成及生长素合成和运输相关的11个基因进行实时荧光定量聚合酶链式反应（quantitative real-time polymerase chain reaction,qRT-PCR）分析。【结果】接种目的菌株KLBMP0506后,平板试验的拟南芥鲜重及侧根、盆栽试验的拟南芥鲜重、干重、茎长、叶绿素含量和可溶性糖含量均有一定程度的增加;分隔平板试验及菌株KLBMP0506发酵液中促生活性物质分析显示,该菌株产生的挥发性有机物质及其发酵液中的正丁醇和乙酸乙酯提取物均对拟南芥有明显的促生作用;此外,qRT-PCR分析显示KLBMP0506处理后,拟南芥中与侧根形成相关基因ABI4、FLA1的表达出现不同程度的下调,与生长素合成、运输相关基因AUX1、EIR1、YUC4的表达整体呈上调趋势,表明菌株KLBMP0506可能通过调控拟南芥中与侧根形成以及与生长素合成和运输相关基因的表达,而实现对拟南芥的促生作用。【结论】本研究明确了菌株KLBMP0506对模式植物拟南芥的促生作用,为其开发成为微生物菌肥提供理论依据。