Arsenate phytoextraction abilities of one-year-old tree species and its effects on the nutritional element content in plant organs

Abstract

The aim of the study was to evaluate the As phytoextraction potential of four tree species: Acer pseudoplatanus L., Betula pendula Roth., Quercus robur L., and Ulmus laevis Pall. in light of their prospective use in the phytoremediation of arsenate [As(V)] contaminated soils. The content of nutritional elements: B, Ca, K, Mg, Na, Si, P, and S was also analyzed. The trees were grown for 1?month in hydroponic cultures (Knop medium) supplemented with As(V), (1?mM). The results showed that the highest As accumulation efficiency was characterized by B. pendula (BCF = 0.87) and Q. robur (BCF = 0.5). Betula pendula accumulated about 80% of As in its roots (TF = 0.22) whereas Q. robur accumulated more than 60% of As in its shoots (TF = 1.60). The other tree species accumulated significantly lower amounts of As, more than 60% of which collected in their shoots. As(V) phytoextraction led to a significantly lower level of P and S in the roots of all tested tree species. Betula pendula seems promising for phytostabilisation and Q. robur for phytoextraction of As(V) from contaminated soils. The obtained results confirm the accumulation and translocation of As(V), as well as the acquisition of nutritional elements by the selected tree species.     

Leaf morphological analyses in four European oak species (Quercus) and their hybrids: A comparison of traditional and geometric morphometric methods

Abstract

In this study, leaf morphology was assessed in a mixed oak stand (western France) using two geometric morphometric (landmark and outline) datasets and one dataset of 19 leaf measures. Adult oaks (817 oaks), comprising four white oak species (Quercus petraea, Q. robur, Q. pubescens and Q. pyrenaica), were sampled for DNA extraction and genetic analysis (nuclear microsatellites). Leaf morphology was assessed on 336 oaks, comprising pure species and hybrids as determined by genetic assignment. This comparative study of oak leaf morphology, based on the use of two free size geometric morphometric methods and a set of leaf measurements, combined with the genetic assignment of individuals to pure species or hybrids, provided information about the differences among species and the intermediate leaf morphology of their hybrids.     

Cytosolic ascorbate peroxidase in some species of the Quercus genus

ABSTRACT

Six species of the Quercus genus (Quercus ilex L., Q. coccifera L., Q. suber L., Q. trojana Webb, Q. macrolepis Kotschy, Q. cerris L.) have been screened for cytosolic ascorbate peroxidase (APX) by means of native polyacrylamide gel electrophoresis (PAGE). A single isozyme was found in five species (Q. trojana, Q. suber, Q. cerris, Q. macrolepis and Q. coccifera), while Q. ilex shows two different APX proteins. The data showed marked similarities among Q. trojana, Q. suber, Q. cerris and Q. macrolepis with respect to the electrophoretic mobility. The validity of APX electrophoretic patterns in systematic studies is discussed.     

纳塔栎和柳叶栎对铅锌矿区污染土壤的修复潜力分析:田间试验

通过野外调查、采样和实验室分析方法,研究优新景观树种纳塔栎（Quercus nuttallii）和柳叶栎（Quercus phellos）对湖南郴州Pb、Zn矿区复合污染土壤的适应性和修复潜力。试验设计A、B、E区种植1年生纳塔栎,C、D区种植1年生柳叶栎,1年后测量株高、地径、生物量等生长指标,随机采集植物全株及根际土壤,测试植物根际土壤和树木组织中的重金属含量。试验结果：Pb、Zn矿区土壤受到重金属Cd、Pb、Zn和As的复合污染,不同区域的土壤表现出污染异质性,采用单污染指数（Pi）和内梅罗指数（P_N）评价不同地块的污染程度,A区尾矿库（P_N=20.08）和B区（P_N=3.14）为重度复合污染,C区（P_N=2.43）为中度复合污染,D区（P_N=1.55）和E区（P_N=1.07）为轻微污染。纳塔栎和柳叶栎在以上不同污染地块均能正常生长,株高、地径和生物量与复合污染指数（内梅罗指数）及重金属含量呈负相关。其中纳塔栎对Cd的生物富集系数（BCF）在A、B、E区分别为6.27-8.37、3.67-4.38、42.93-52.75,高于C、D区柳叶栎对Cd的生物富集系数1.79-2.15、0.89-1.07。B-E区Zn的转运系数（TF）在1.79-2.28之间,A区Zn的转运系数为0.43。结论：纳塔栎和柳叶栎表现出较强的重金属耐性,对Cd具有较高的生物富集能力,对Zn具有较高的转运能力。其中纳塔栎对重金属积累能力较强,可作为亚热带地区铅锌矿区Cd、Pb、Zn、As复合污染土壤的植被恢复及生态修复候选树种。     

FLAVONOID DIVERSIFICATION IN THE ACHILLEA AGERATIFOLIA AND A. CLAVENNAE GROUPS (ASTERACEAE)

The Achillea ageratifolia and A. clavennae groups (Asteraceae, tribe Anthemideae) were investigated for intra- and interspecific leaf flavonoid variation. Numerous flavonoid glycosides, mostly unidentified, and variously methylated free aglycones based on scutellarein, 6-hydroxyluteolin, quercetagetin, and 6-hydroxy-kaempferol were detected. The distribution of methylated aglycones among individuals of A. ageratifolia was used to model the putative biosynthetic pathways. Several steps in the biosynthesis probably involve enzymes (methyltransferases) with strict positional specificities and broader substrate specificities. Geographical patterns in the flavonoid content of A. ageratifolia were only partly consistent with the current concept of A. ageratifolia. Different flavonoid profiles in A. ageratifolia do not appear to be of crucial importance in its adaptation to different habitats. The species of the A. clavennae group were clearly separable on flavonoid profiles and the presence of a hybrid population was supported by the flavonoid data. Interspecific differences in number of glycosides in relation to the number of free aglycones are discussed.     

Characterization and application of a native lactic acid bacterium isolated from tannery fleshings for fermentative bioconversion of tannery fleshings

Lactic acid bacteria (LAB) species isolated from limed and delimed tannery fleshings (TF) were evaluated for their fermentation efficiency and antibacterial property. The native LAB isolates efficiently fermented TF and resulted in a fermented mass with antioxidant properties, indicating their potential for effective eco-friendly bioconversion of TF. From among the LAB isolated, a proteolytic isolate showing better antimicrobial spectrum and reasonably good fermentation efficiency was identified as Enterococcus faecium HAB01 based on various biochemical and molecular tests. This isolate afforded a better degree of hydrolysis (81.36%) of TF than Pediococcus acidilactici (54.64%) that was previously reported by us. The bacteriocin produced by E. faecium was found to be antagonistic to several human pathogens including Listeria, Aeromonas, Staphylococcus and Salmonella. Further, E. faecium HAB01 bacteriocin was thermostable and had a molecular weight of around 5 kDa, apart from being stable at both acidic and alkaline conditions. The bacteriocin was unstable against proteases.     

Species distribution of genus Quadraceps (Mallophaga: Philopteridae) on New Zealand endemic plovers

Abstract

The louse genus Quadraceps Clay & Meinertzhagen is represented on New Zealand endemic Charadriinae by Q. dominella Timmermann, Q. novaeseelandiae Timmermann, and Q. cedemajori Timmermann, which are parasitic on Charadrius obscurus (Gmelin), Thinornis novaeseelandiae (Gmelin), and Anarhynchus frontalis Quoy & Gaimard respectively. Charadrius bicinctus Jardine & Selby is parasitised by both Q. novaeseelandiae and Q. cedemajori. This pattern of distribution is unusual, in that two Quadraceps species are sympatric on the same host individuals, and host species that are not closely related have louse species in common. It seems probable that C. bicinctus has been secondarily colonised by two species of Quadraceps. One species appears to have primarily evolved on 7 novaeseelandiae and the other on A. frontalis.     

Comparative leaf surface morphology and molecular data of five oaks of the subgenus Quercus Oerst (Fagaceae)

Abstract

Comparisons between different data sets are important in taxonomic studies, particularly for complex taxa such as the genus Quercus. However, there is scarce literature on comparative morphological and molecular analyses in oaks. Here we describe an experimental approach based on the correlation between micromorphological features and molecular data in order to characterize and discriminate among five closely related species: Q. robur, Q. petraea, Q. frainetto, Q. pubescens and Q. virgiliana.     

安徽某铁矿不同矿山废水库中微生物群落结构特征

【目的】研究安徽某铁矿不同矿山废水库中微生物群落结构特征及其影响因素。【方法】对比分析了该铁矿3个大型废水库的地球化学特征,并用高通量测序技术研究了水体中微生物群落组成,进而用统计学方法解析了环境因子对微生物群落结构的影响。【结果】3个废水库中有2个为酸性,1个为中性,理化性质有明显的差异。近年形成的塌方采场废水库(TF) pH仅为2.55±0.01,Fe浓度高达154.95±0.78mg/L,SO_4~(2–)浓度为3374.86±3.81mg/L;形成于20世纪70年代的排土场废水库(PT)酸性略弱(pH 2.9±0.02),Fe浓度(34.57±4.00 mg/L)与TF相比明显降低,SO_4~(2–)浓度则高达10398.98±626.70 mg/L;东沙采场废水库(DS)则为中性(pH7.55),但SO_4~(2–)仍高达4162.99mg/L,主要的金属离子为Mg(594.90 mg/L)、Ca (650.10 mg/L)。3个废水库的原核生物多样性随pH的升高而升高。两个酸性废水库的原核生物组成较为接近,但TF的化能自养菌含量较高(69.54%±2.89%),PT的化能异养菌含量较高(64.45%±13.81%)。自养铁氧化菌Ferrovum在TF中的比例高达(64.17±1.84)%,在PT中则下降为(35.39±13.74)%。但PT中含有丰富的化能异养嗜酸菌如Acidicapsa(15.75%±3.99%)、Acidiphilium(10.65%±2.05%)、Acidisphaera (6.34%±1.02%)等。DS中虽然也含有较高的金属离子和SO_4~(2–),但其中的原核生物组成与TF和PT截然不同,主要为Limnohabitans (18.47%)、Rhodobacter (8.42%)等。3个废水库的真核生物群落主要由藻类组成,酸水库TF和PT中主要为棕鞭藻属(Ochromonas)和胶球藻属(Coccomyxa),棕鞭藻属在TF中(53.65%±2.02%)占优势,胶球藻属在PT中(68.84±10.4%)占优势,中性废水库DS中则主要是小环藻属(Cyclotella)(49.85%)。经统计学分析,pH是影响矿山废水微生物多样性和群落组成的主要环境因素。     

创伤弧菌TF3全基因组包含的CRISPR-Cas系统及MGIVvuTF3基因岛分析

【目的】分析创伤弧菌(Vibrio vulnificus)全基因组框架序列,挖掘感兴趣的遗传位点,探索其是否具有CRISPR系统及其特征。【方法】在病虾体内分离获得了一株创伤弧菌TF3,通过Illumina Miseq测序得到基因组框架序列。经注释分析发现其基因组中存在一个CRISPR-Cas系统,命名为CRISPR-CasTF3,进一步分析发现CRISPR-CasTF3位于一个基因岛上,将该基因岛命名为MGIVvu TF3。对CRISPR-CasTF3及MGIVvu TF3的特征和来源进行了分析。【结果】CRISPR-CasTF3属于与大肠杆菌类似的Ι-E型CRISPR-Cas系统,CRISPR-CasTF3包括8个cas基因,其排列为cas3-cas8e-cse2-cas6-cas7-cas5-cas1-cas2;具有50个重复序列,每二个重复序列间为一个Spacer序列。MGIVvu TF3具有att L和att R序列,含有位点特异性整合、剪切、转移相关的基因。MGIVvu TF3与霍乱弧菌O395基因组中的一个基因岛MGIVch0395具较高相似性,二者最显著的差别在于Spacer序列完全不同,以及各有几个非保守的预测基因。【结论】MGIVvu TF3及CRISPR-CasTF3极有可能通过基因水平转移获得,并且CRISPR-CasTF3系统可以借助MGIVvu TF3实现水平转移。     

Evaluation of Phytochemical Compositions and Biological Properties of Achillea gypsicola at Different Phenological Stages

Phytochemicals, which are commonly found at different levels in many medicinal plants, are natural strong antioxidants used in traditional medicine. In this research, determination of differences of phytochemical compositions and biological properties were aimed as periodically (pre‐, full and post flowering) and daily (6 am, 1 pm and 8 pm) in Achillea gypsicola Hub.‐Mor . The volatile oils belonging to A. gypsicola were obtained by hydrodistillation and analyzed by gas chromatography‐flame ionization detection (GC‐FID) and gas chromatography‐mass spectrometry (GC/MS). The antimicrobial activities of the volatile oils were determined with disc diffusion method. The microdilution method was used to determine minimum inhibitory concentration (MIC). Total phenolic and flavonoid contents were determined by spectrophotometric methods and antioxidant capacities were evaluated by 2,2‐diphenyl‐1‐picrylhydrazyl (DPPH) free radical, reducing power (RP) and metal chelating activity (MCA) assay. In addition, the phenolic acid and flavonoid compositions were evaluated by reversed phase‐high‐performance liquid chromatography (RP‐HPLC). This study presented a comprehensive report for the first time on evaluation of the phytochemical composition and the biological properties of A. gypsicola at different phenological stages. Thirty‐two compounds, containing the major component as camphor, 1,8‐cineole and borneol, were detected. Designated harvest time for the highest yield of volatile oils was found to be at full flowering stage‐1 pm. It has been observed that the volatile oil composition changes periodically and even daily. Also, in this research, menthol and menthone were found as the composition of volatile oil in Achillea species for the first time. Full flowering stage was found as the richest period in terms of phenolic acid and flavonoid compositions of A. gypsicola for the first time. The species examined in this research showed a high antioxidant and antimicrobial activity in comparison to other studies with Achillea species. The volatile oils exhibited high performances with range of inhibition zones (8.3–42.3 mm) and minimum inhibitory concentration values (2.25—144 μg/ml). Besides, a high correlation between antioxidant activity and phenolic content of A. gypsicola was found. These results suggest that A. gypsicola can be used as a safe source in the cosmetic, food and pharmaceutical industries.     

金毛狗对重金属的富集特性的研究

为探讨金毛狗[Cibotium barometz(L.) J. Sm.]对重金属的富集能力,在广东省选取6个样点(南岭、南昆山、白云山、大岭山、梧桐山、西樵山)采集金毛狗的叶片、根状茎和根际土壤,采用ICP-MS测定9种重金属元素(Cr、Mn、Ni、Cu、Zn、As、Cd、Hg、Pb)的含量。结果表明,样地土壤已受到不同程度的重金属污染,土壤中Cd和Hg含量均高于广东省土壤背景值,分别为背景值的1.61~4.82倍和4.74~11.79倍。西樵山土壤中Cd含量最大,南岭土壤中Hg含量最大。在9种元素中,金毛狗对Hg的转运系数最高,达4.8,对Cd的富集系数最高,达2.2,Cu和Cd元素的转运系数和富集系数均大于1。这说明金毛狗对重金属元素的富集能力较弱而转运能力较强。     

Polyphenols,flavonoids, antioxidant activity in leaves and flowers of Tunisian Globularia alypum L. (Globulariaceae)

Leaves and flowers from Tunisian Globularia alypum were assessed for their phenolic and flavonoid contents and antioxidant activity. Phenolic (15.5–22.30 mg GAE g^?1 DW) and flavonoid (3.63–4.72 mg RE g^?1 DW) contents varied according to plant part. Globularia alypum leaves exhibited the highest phenol and flavonoid contents, and displayed the highest antioxidant activity, based on radical‐scavenging activity (295 μmol TEAC g^?1 DW) and ferric reducing power (24.27 mmol Fe2+/l). The obtained results demonstrated that some of the isolated compounds play an important role for the antioxidant activity of G. alypum and give a scientific basis to the use of this plant in traditional medicine. The methanolic extract of G. alypum could be considered as a source of potential antioxidants and will promote the reasonable usage of this plant in food technology and processing as well as for medical use.     

Variation in Phenolic Profile, β‐Carotene and Flavonoid Contents,Biological Activities of Two Tagetes Species from Pakistani Flora

The objective of present study was to evaluate the variation in phenolic profile, β‐carotene, flavonoid contents, antioxidant and antimicrobial properties of Tagetes erecta and Tagetes patula (T. erecta and T. patula) through different in vitro assays. Antioxidant activity was determined through 2,2‐diphenyl‐1‐picrylhydrazyl (DPPH) free radical scavenging and inhibition of linoleic acid peroxidation assays and antibacterial and antifungal activities studied using the disc diffusion and resazurin microtiter‐plate assays against bacterial and fungal strains. Moreover, total phenolics (TP), total carotenoids (TC) and total flavonoids (TF) were also determined. Highest (TP 35.8 mg GAE/g) and TF (16.9 mg CE/g) contents were found in MeOH extract of T. patula. T. erecta extract showed higher TC contents (6.45 mg/g) than T. patula extract (6.32 mg/g). T. erecta exhibited the highest DPPH radical‐scavenging activity (IC₅₀) (5.73 μg/mL) and inhibition of linoleic acid peroxidation (80.1%). RP‐HPLC revealed the presence of caffeic acid, sinapic acid and ferulic acid in Tagetes extracts, m‐coumaric acid in T. erecta whereas chlorogenic acid in T. patula extract only. Both extracts possessed promising antimicrobial activity compared to the ciprofloxacin and flumequine (+ve controls) against Bacillus subtilis and Alternaria alternate. Both extract were rich source of polyphenols exhibiting excellent biological activities.     

米修链霉菌TF78对香蕉枯萎病的田间防效及根际土壤微生物的影响

【背景】香蕉枯萎病是香蕉生产上的毁灭性病害,生物防治是遏制该病害发生的有效手段。在前期的研究中,从健康香蕉根际土壤中分离获得一株对香蕉枯萎病具有良好盆栽防治效果的生防菌——米修链霉菌(Streptomyces misionensis) TF78,但其对香蕉枯萎病的田间生防潜力和对土壤微生物环境的影响尚不清楚。【目的】评价米修链霉菌TF78对香蕉枯萎病的田间防治效果,明确其对香蕉根际土壤微生物群落的影响。【方法】选取两块发病香蕉园,测定该生防菌株对香蕉枯萎病的防治效果,并利用扩增子测序技术分析施用菌剂组和空白对照组共12份香蕉根际土壤的微生物多样性和丰度。【结果】米修链霉菌TF78对两块香蕉园的田间防效分别达55.30%和45.32%。该生防菌株处理组的物种稀释曲线坡度大于空白对照组,并显著富集了优势种群梳霉门(Kickxellomycota),消减了绿弯菌门(Chloroflexi)、酸杆菌门(Acidobacteria)和苔藓杆菌(Bryobacter)的丰度,对土壤中优势种群变形菌门(Proteobacteria)、厚壁菌门(Firmicutes)、放线菌门(Actinobacteria)、芽单胞菌门(Gemmatimonadetes)及木霉属(Trichoderma)、鞘氨醇单胞菌属(Sphingomonas)、寡养单胞菌属(Stenotrophomonas)和芽孢杆菌属(Bacillus)的相对丰度影响不显著。【结论】米修链霉菌TF78塑造了不利于香蕉枯萎病菌Fusarium oxysporum f.sp.cubense存活的土壤环境,有效降低了田间香蕉枯萎病的发生,同时对土壤中大部分具有重要生态功能和抑菌功能的优势微生物种群影响不显著。该研究结果为米修链霉菌TF78的进一步开发应用奠定了基础。     

副溶血弧菌TF2中整合接合元件ICEVpaTF2的生物信息学特征和剪切、环化活性

[目的] 从副溶血弧菌TF2基因组框架序列中拼接获得整合性接合元件（ICE）ICEVpaTF2的全序列,分析其基因组学特征;研究ICEVpaTF2是否具有从基因组中剪切、环化活性以及剪切、环化时attB和attP位点如何形成。[方法] 对副溶血弧菌TF2基因组框架序列进行RAST注释,发现其基因组中可能存在一个完整的ICE元件,命名为ICEVpaTF2,经过人工拼接和PCR扩增测序验证,得到完整的ICEVpaTF2序列,并对ICEVpaTF2再次进行RAST注释和ICE元件部分特征分析。通过PCR检测,探索ICEVpaTF2是否能够从基因组剪切并环化。通过attL、attR、attB、attP位点序列比较,探索attB和attP重组特征。[结果] ICEVpaTF2全长83588 bp,包含SXT/R391家族ICE元件的52个保守核心基因,它们与ICE切除、整合、自我转移和调节机制相关。ICEVpaTF2也包含5个外源基因插入的热点区（HS）、2个可变区（VR）以及3个非典型插入位点。HS和VR包含了大量可变基因,它们负责编码限制性修饰系统、DNA修复系统或毒素-抗毒素系统等,赋予宿主广泛适应性功能,ICEVpaTF2也包含独特未知功能基因。通过对int、xis二个核心保守基因种系发生分析,发现ICEVpaTF2的int、xis分别属于以R391和SXT为代表的亚群。ICEVpaTF2在attL和attR处发生剪切并完成环化,新形成杂合重组的attB和attP位点。[结论] ICEVpaTF2属于SXT/R391家族,是一个具备自我剪切和环化能力的完整ICE元件,剪切后新形成的attB和attP位点由attL、attR杂合重组形成。     

Distinct male reproductive strategies in two closely related oak species

Reproductive strategies of closely related species distributed along successional gradients should differ as a consequence of the trade‐off between competition and colonization abilities. We compared male reproductive strategies of Quercus robur and Q. petraea, two partly interfertile European oak species with different successional status. In the studied even‐aged stand, trees of the late‐successional species (Q. petraea) grew faster and suffered less from intertree competition than trees of the early‐successional species (Q. robur). A large‐scale paternity study and a spatially explicit individual‐based mating model were used to estimate parameters of pollen production and dispersal as well as sexual barriers between species. Male fecundity was found to be dependent both on a tree's circumference and on its environment, particularly so for Q. petraea. Pollen dispersal was greater and more isotropic in Q. robur than in Q. petraea. Premating barriers to hybridization were strong in both species, but more so in Q. petraea than in Q. robur. Hence, predictions based on the competition–colonization trade‐off are well supported, whereas the sexual barriers themselves seem to be shaped by colonization dynamics.     

Elucidating the role of oxidative stress in the therapeutic effect of rutin on experimental acute pancreatitis

Introduction: Acute pancreatitis (AP) may be severe and cause hospitalization or death, and the available treatment is insufficient to control pancreatic inflammation and pain. Rutin is a natural flavonoid with the potential to treat AP via anti-inflammatory, antinociceptive, and antioxidant activities.

Aim: This study investigated the beneficial effects of rutin on experimental AP induced by l-arginine administration in mice.

Methods: The l-arginine-induced AP model was used in Swiss mice (n?=?6–8). Mice submitted to AP induction were treated with rutin (37.5, 75, or 150?mg kg^?1, p.o.) or vehicle (saline) after 24, 36, 48, and 60?h of AP induction. Abdominal hyperalgesia, serum enzymes, interleukin (IL)-6 levels, pancreatic inflammatory parameters, malondialdehyde (MDA) levels, antioxidant enzyme activities, and 3-nitrotyrosine contents were measured 72?h after induction.

Results: Mice submitted to l-arginine injections developed abdominal hyperalgesia and increased serum amylase, lipase, C-reactive protein and IL-6 concentrations; and increased pancreatic myeloperoxidase activity, edema index, MDA, and 3-nitrotyrosine contents. A marked decrease in catalase activity was observed in the pancreas without alterations of superoxide dismutase (SOD) activity compared with the control group. Rutin treatment significantly impaired all the parameters that were altered by AP induction, but increased catalase and SOD activities in the pancreas compared with the vehicle-treated group.

Conclusion: Rutin treatment exerted a protective effect on l-arginine-induced AP by mechanisms involving the reduction of oxidative stress, which suggests that this flavonoid has a potential for future approaches designed for the management of AP.