陕西水牛化石及中国化石水牛的地理分布和种系发生

描述并比较了在陕西大荔、咸阳发现的水牛化石,一为Ｂｕｂａｌｕｓ ｔｅｉｌｈａｒｄｉ,与周口店第一地点的相近。另一为Ｂ． ｙｏｕｎｇｉ,与河南孟县的相似。水牛化石在中国的分布至今仍集中在中一东部,南、北方都有,其栖息环境与现代水牛的基本一样,生活在温暖、湿润的环境中。用支序系统学方法分析了中国化石水牛的种系发生。     

THE DNA POLYMERASE GENE OF A BROWN ALGAL VIRUS: STRUCTURE AND PHYLOGENY

We have reported the complete sequence of the DNA polymerase gene from the virus that infected a filamentous brown alga, Feldmannia sp. (FsV). The DNA polymerase gene from FsV encoded 986 amino acids and contained all the conserved motifs of 3'-5' exonuclease domains and catalytic domains found in B-family (α-like) DNA polymerases. The codons for the FsV DNA polymerase appeared to have some bias toward guanine/cytosine (G/C) in the third position. The phylogenetic analysis of the FsV DNA polymerase gene and other viral DNA polymerase genes indicated that FsV belongs to a family of algal viruses recently defined as Phycodnaviridae.     

MITOCHONDRIAL DNA SEQUENCE-BASED PHYLOGENY AND THE EVOLUTION OF VIVIPARITY IN THE SCELOPORUS SCALARIS GROUP (REPTILIA,SQUAMATA)

The lizard genus Sceloporus contains both oviparous and viviparous species. The scalaris complex is the only monophyletic group within the genus that includes both reproductive modes, thus it is particularly well suited for studies of the evolution of viviparity. Approximately 874 nucleotides of mtDNA sequence data, collected from 38 specimens, comprising 25 populations of all five recognized species within the group, were used in a phylogenetic analysis of the origin of viviparity. Viviparity appears to have evolved twice in this group: once in S. goldmani, included in a clade formed by a northern group consisting of S. scalaris, S. chaneyi, and S. goldmani, and one more time in S. bicanthalis, included in the southern group formed by S. bicanthalis and S. aeneus. An oviparous population of S. bicanthalis nested within that viviparous clade, indicates that reversal from viviparity to oviparity may be possible. Degree of sequence divergence among several S. bicanthalis individuals pertaining to a population in which both parity modes occur, was no larger between oviparous and viviparous lizards than among viviparous lizards. This suggests that this population is a single species, and it may represent a transition from oviparity to viviparity or vice-versa.     

PHYLOGENETIC ANALYSES OF THE CORRELATED EVOLUTION OF CONTINUOUS CHARACTERS: A SIMULATION STUDY

We use computer simulation to compare the statistical properties of several methods that have been proposed for estimating the evolutionary correlation between two continuous traits, and define alternative evolutionary correlations that may be of interest. We focus on Felsenstein's (1985) method and some variations of it and on several “minimum evolution” methods (of which the procedure of Huey and Bennett [1987] is a special case), as compared with a nonphylogenetic correlation. The last, a simple correlation of trait values across the tips of a phylogeny, virtually always yields inflated Type I error rates, relatively low power, and relatively poor estimates of evolutionary correlations. We therefore cannot recommend its use. In contrast, Felsenstein's (1985) method yields acceptable significance tests, high power, and good estimates of what we term the input correlation and the standardized realized evolutionary correlation, given complete phylogenetic information and knowledge of the rate and mode of character change (e.g., gradual and proportional to time [“Brownian motion”] or punctuational, with change only at speciation events). Inaccurate branch length information may affect any method adversely, but only rarely does it cause Felsenstein's (1985) method to perform worse than do the others tested. Other proposed methods generally yield inflated Type I error rates and have lower power. However, certain minimum evolution methods (although not the specific procedure used by Huey and Bennett [1987]) often provide more accurate estimates of what we term the unstandardized realized evolutionary correlation, and their use is recommended when estimation of this correlation is desired. We also demonstrate how correct Type I error rates can be obtained for any method by reference to an empirical null distribution derived from computer simulations, and provide practical suggestions on choosing an analytical method, based both on the evolutionary correlation of interest and on the availability of branch lengths and knowledge of the model of evolutionary change appropriate for the characters being analyzed. Computer programs that implement the various methods and that will simulate (correlated) character evolution along a known phylogeny are available from the authors on request. These programs can be used to test the effectiveness of any new methods that might be proposed, and to check the generality of our conclusions with regard to other phylogenies.     

PHYLOGENY OF THE SUBFAMILY SCOTIELLOCYSTOIDEAE (CHLOROPHYCEAE, CHLOROPHYTA) AND RELATED TAXA INFERRED FROM 18S RIBOSOMAL RNA GENE SEQUENCE DATA

Nuclear-encoded small subunit ribosomal RNA gene (18SrDNA) sequences were determined for Coelastrella multistriata (Trenkwalder) Kalina et Punčochářová, two species of Scotiellopsis ( S. oocystiformis (Lund) Kalina et Punčochářová and S. terrestris (Reisigl) Kalina et Punčochářová) and two species of Muriella ( M. aurantiaca Vischer and M. terrestris Boye- Petersen). Coelastrella and Scotiellopsis are members of the subfamily Scotiellocystoideae, and Muriella is a member of the subfamily Chlorelloideae in the family Chlorellaceae. Phylogenetic trees were constructed based on these sequence data and on previously known 18SrDNA sequences of 25 taxa. Coelastrella and Scotiellopsis were closely related to each other and formed a cluster with Scenedesmus vacuolatus (Shihira et Krauss) Kessler et al. This cluster shared a monophyletic ancestry with other Scenedesmus species. Muriella aurantiaca formed a sister relationship with the monophyletic lineage of Scenedesmus. However, another species, M. terrestris, was placed in the Trebouxiophyceae and was strongly related to Chlorella. The genus Mychonastes belonging to the Scotiellocystoideae was also not monophyletic. This study suggests that the subfamily Scotiellocystoideae should be removed from the Chlorellaceae.     

CHARACTER DISCRIMINATORY POWER,CHARACTER-SET CONGRUENCE,AND THE CLASSIFICATION OF INDIVIDUALS FROM HYBRID ZONES: AN EXAMPLE USING STONE CRABS (MENIPPE)

Many investigators categorize individuals from hybrid zones to facilitate comparisons among genotypic classes (e.g., parental, F₁, backcross) for comparative studies in which components of fitness or geographic variation are being analyzed. Frequently, multiple character sets representing genetically independent traits are used to classify these individuals and various methodologies are employed to combine the classifications obtained from the different character sets. We adapted the principles of total evidence and taxonomic congruence (two formalized approaches used by systematists in formulating phylogenetic hypotheses) to address the problem of discriminating hybridizing species and classifying individuals from hybrid zones. As our model, we used two morphological (coloration and morphometric) and two molecular (allozyme and mitochondrial DNA restriction-fragment-length polymorphism) character sets that differentiate two stone crab species (Menippe adina and M. mercenaria). Using principal-components analysis, we determined that combining character sets and eliminating characters or character sets that did not have large eigenvector coefficients for the principal component that best separated the two species yielded the highest level of discrimination between species and allowed us to classify a broad range of morpho-genotypes as hybrids. For the stone crabs, three diagnostic allozyme loci and five diagnostic coloration characters best separated the species. The two character sets were not completely congruent, but they agreed in their classification of 50% of the individuals from the hybrid zone and rarely strongly disagreed in their classifications. Classification discrepancies between the two character sets probably represent variation between traits in interspecific gene flow rather than intraspecific, ecologically mediated variation. Our results support the assertions of previous investigators who espoused the benefits associated with using multiple character sets to classify individuals from hybrid zones and demonstrate that, if character sets are reasonably congruent and numerically balanced, combining diagnostic characters from multiple character sets (a total-evidence approach) can enhance discriminatory power between species and facilitate the assignment of hybrid-zone individuals to genotypic classes. On the contrary, classifying hybrid-zone individuals using character sets separately (a taxonomic-congruence approach) provides the opportunity to compare levels of introgression between species and to assess reasons for discordance among the data sets.     

TOWARD A NATURAL SYSTEM OF SPECIES IN CHLOROGONIUM (VOLVOCALES, CHLOROPHYTA): A COMBINED ANALYSIS OF MORPHOLOGICAL AND rbcL GENE SEQUENCE DATA

The taxonomy of species of Chlorogonium (Volvocales, Chlorophyta) was studied based on comparative light and electron microscopy and DNA sequence data of 23 strains from five major algal culture collections. All of the 23 strains showed pyrenoids under photoautotrophic conditions, but 17 of the 23 exhibited marked reduction in size of pyrenoids, or pyrenoids were absent under photoheterotrophic conditions. The strains could clearly be delineated into six species, C. euchlorum, C. elongatum, C. fusiforme, C. capillatum, C. neglectum, and C. kasakii on the basis of differences in cell shape, number of contractile vacuoles, number and stability of pyrenoids, and ultrastructure of pyrenoids and stigmata. This distinction of species based on morphology was also supported by analyses of rbc L gene sequences. The later strongly showed that each species, C. euchlorum (seven strains), C. elongatum (three strains), and C. capillatum (10 strains), forms a robust clade. Although some morphological differences were noted within different strains of C. euchlorum and C. capillatum, these features were regarded as strain-specific because they were not reflected in the rbc L gene phylogenies. In addition, the rbc L gene trees strongly suggested that C. neglectum and C. kasakii are closely related to each other, consistent with the similarity of the ultrastructure of pyrenoids and stigmata between the two species. However, C. kasakii can be distinguished clearly from C. neglectum by its multiple pyrenoids in the chloroplast and acute anterior and posterior ends in the vegetative cell.     

THE PLEURASTROPHYCEAE AND MICROMONADOPHYCEAE: A CLADISTIC ANALYSIS OF NUCLEAR rRNA SEQUENCE DATA1

Partial sequences from the nuclear-encoded 18S and 26S ribosomal RNA molecules from representatives of the five classes of Chlorophyta sensu Mattox and Stewart (1984) were analyzed cladistically in a study of the phylogenetic relationships among the Micromonadophyceae, Pleurastrophyceae, and other green algae. The sequence data indicate that the Micromonadophyceae (= Prasinophyceae) is not monophyletic but comprises at least three lineages occupying a basal position among the green algae. Though the Pleurastrophyceae and the Ulvophyceae both possess counter-clockwise basal body orientations, the sequence data indicate that the Pleurastrophyceae is the sister group to the Chlorophyceae. The molecular data alone do not resolve the monophyly of the Pleurastrophyceae or the Ulvophyceae; however, a combined data set of molecular and non-molecular characters support a monophyletic Pleurastrophyceae. Analyses with user-defined tree topologies and the bootstrap method of character resampling indicate that the relationships shown in the most parasimonious cladograms are well supported by the character data.     

中国化石两栖类和有鳞类研究进展:过去15年回顾

过去15年中,我国的化石两柄类和有鳞类研究取得了加速进展。共报道了16种两栖类和22种有鳞类,其中15种两栖类和11种有鳞类为新种,包括我国最古老的四足动物宁夏晚泥盆世的潘氏中国螈,湖北中三叠世的大型全椎两栖类宽头远安鲵,东北晚侏罗世/早白垩世的多种滑体两栖类(如无尾类三燕丽蟾和北票中蟾,有尾类奇异热河螈和东方塘螈),华北占近纪的蜥蜴类(如淅川短齿蜥和垣曲响蜥),以及内蒙古晚白垩世的多种蜥蜴类等。部分旧属种被修订,多与热河生物群的种类有关,如细小矢部龙过去依据幼年个体被认为是一种小型细弱的蜥蜴,新材料显示它实为大型强壮的种类。一批新的两栖类和有鳞类重要化石点被发现,如辽宁北票市四合屯、陆家屯和葫芦岛市水口子,河北丰宁县炮仗沟以及内蒙古宁城县道虎沟和乌拉特后旗巴彦满达呼。我国晚侏罗世/早白垩世两栖类和有鳞类对研究滑体两栖类和有鳞类相关类群的起源和早期演化提供了重要信息,但系统发育研究工作尚处于初级阶段。     

PHYLOGENY OF PHAGOTROPHIC EUGLENIDS (EUGLENOZOA): A MOLECULAR APPROACH BASED ON CULTURE MATERIAL AND ENVIRONMENTAL SAMPLES1

Molecular studies based on small subunit (SSU) rDNA sequences addressing euglenid phylogeny hitherto suffered from the lack of available data about phagotrophic species. To extend the taxon sampling, SSU rRNA genes from species of seven genera of phagotrophic euglenids were investigated. Sequence analyses revealed an increasing genetic diversity among euglenid SSU rDNA sequences compared with other well‐known eukaryotic groups, reflecting an equally broad diversity of morphological characters among euglenid phagotrophs. Phylogenetic inference using standard parsimony and likelihood approaches as well as Bayesian inference and spectral analyses revealed no clear support for euglenid monophyly. Among phagotrophs, monophyly of Petalomonas cantuscygni and Notosolenus ostium, both comprising simple ingestion apparatuses, is strongly supported. A moderately supported clade comprises phototrophic euglenids and primary osmotrophic euglenids together with phagotrophs, exhibiting a primarily flexible pellicle composed of numerous helically arranged strips and a complex ingestion apparatus with two supporting rods and four curved vanes. Comparison of molecular and morphological data is used to demonstrate the difficulties to formulate a hypothesis about how the ingestion apparatus evolved in this group.     

BADGE SIZE,PHENOTYPIC QUALITY,AND REPRODUCTIVE SUCCESS IN THE HOUSE SPARROW: A STUDY ON HONEST ADVERTISEMENT

Honest signaling theory suggests that advertising traits must be costly to their bearer; thus, only individuals of high phenotypic quality can exhibit maximal expression of these traits. Males of the sexually dichromatic house sparrow, Passer domesticus, have a black throat patch that functions as a badge of status. I investigated whether badge size honestly shows phenotypic quality. Badge size increases with age and decreases with advancing fledging date in yearling males; thus, badge size was larger in older individuals even though age differences were small. Badge size also increased with physical condition independent of age. These results indicate that badge size functions as an honest signal, possibly because there are costs involved in its production. I also found that males with enlarged badges acquired more nest sites than either control males or males with reduced badges. However, males with enlarged badges possessing a nest site raised fewer fledglings per year than did males with reduced badges, suggesting that cheating has no selective benefit. Further studies that accurately measure the energy expenditure allocated to badge production and that quantify additional fitness components are needed to clarify how reliable badges are maintained.     

ON FITTING EQUATIONS TO SENSORY DATA: A POINT OF VIEW, AND A PARADOX IN MODELING AND OPTIMIZING

When fitting equations to data relating ingredients or factor scores to subjective ratings, there are at least two methods to create the equations. One method, (linear) forces in linear terms and allows additional quadratic and interaction terms. The other method, (quadratic) forces in linear and quadratic terms, and then permits cross-terms to enter. The two methods produce contradictory results. The first (and expected) contradiction is that the quadratic model shows optimum levels in the middle range of the levels tested for some, but not all, ingredients. The second (and unexpected) contradiction is that the linear method (which usually does not incorporate many additional terms) generates better validation predictions for hold-out samples than does the quadratic method. The differences between the optimum generated by the linear model and the optimum generated by the quadratic model can be quite substantial in terms of expected liking, sensory profile, and image profile.     

中国纩蚜属研究及新种新亚种记述(同翅目:纩蚜科)(英文)

通过对中国纩蚜属的研究,作者提出纩蚜属的现代地理分布呈岛状分布的格局;并推测该属的起源中心可能在欧洲,现代分化中心可能在中国的横断山脉地区。从动物地理的角度,探讨了该属内的系统发育关系。同时,发现一新种,即云杉纩蚜Mindaurspiceasuctusspnov.。正模为无翅孤雌蚜,副模为5只有翅孤雌蚜和8只无翅孤雌蚜,分布在云南省昆明市,辽宁省沈阳市和熊岳县。一新亚种,即冷杉纩蚜三圈亚种M.abietinustriprimesensorissp.nov.,正模为有翅孤雌蚜,副模为3只有翅孤雌蚜,分布在云南省丽江市玉龙山。一新纪录种,即冷杉纩蚜指名亚种M.abietinusabietinusKoch1856。并且给出种的检索表,模式标本存放在中国科学院动物研究所标本馆。     

THE EFFECT OF SEASON ON A BIOTIC WATER QUALITY INDEX: A CASE STUDY OF THE YELLOW JACKET AND MAZOWE RIVERS,ZIMBABWE.

Summary

The effect of season on the South African Scoring System (SASS) biotic index for rapid assessment of water quality using benthic macroinvertebrates was investigated using the Yellow Jacket and Mazowe Rivers in Zimbabwe as a case study. Several impacts in the area degraded water quality. These were habitat destruction, acid mine drainage and organic pollution. SASS score at all sites changed with season. At and downstream from polluted sites, water quality determined using SASS was best at the end of the rainy season and it deteriorated steadily into the dry season. SASS scores from sites upstream of pollution appeared to improve towards the end of the rainy season. Average Score Per Taxon indices did not have a significant pattern of seasonal variation. SASS was designed to monitor water quality in South African rivers, so when implementing any monitoring programme, selection of sampling season and the interpretation of results in areas with similar climate patterns should take seasonal effects into account, It must be appreciated that water quality at impacted sites is a dynamic variable related both to the activities of polluters and to season.     

THE USE OF TOXICITY TESTING IN EFFLUENT REGULATION AND CONTROL: A NEW DIMENSION TO ASSESSMENT AND MANAGEMENT OF WATER QUALITY IN SOUTH AFRICA

Summary

Efficient management tools are continually required to cope with increasing demands placed on the quality and quantity of aquatic resources. Recent developments in environmental monitoring indicate the importance of incorporating biological indicators in assessment programmes. Aquatic toxicology has consequently become an important monitoring and regulatory science. Applications of aquatic toxicity testing include: deriving water quality criteria; toxicological evaluations of whole effluents and receiving waters; and the estimation of ecological risk. Toxicity testing can potentially play a significant role in improving water quality in years to come, especially through its application in effluent regulation. Currently however, few environmental laboratories in South Africa have the required expertise and facilities to carry out a representative range of toxicity tests. Training and funding are required to build the capacity for the necessary developmental research, before toxicity testing can routinely be implemented.

The significant problems we face cannot be solved at the same level of thinking we were at when we created them. Albert Einstein.     

液相色谱/光谱(紫外、质谱及核磁共振)联用技术在中草药有效成分研究中的应用

本文综述了液相色谱／光谱(紫外、质谱及核磁共振)联用技术的最新进展及其在中草药有效成分研究中的应用。并对这一新技术在实际应用中的优缺点及应用前景进行了分析和展望。     

射线诱导在体造血细胞凋亡的量时效关系的研究

以4—10Gy射线在体损伤的小鼠为模型,应用DNA电泳和流式细胞术等方法证实细胞凋亡是射线损伤在体骨髓造血细胞的途径之一,发现射线诱导的造血细胞凋亡有明显的量效和时效关系。4、6、8和10Gy照射后,细胞凋亡发生率均表现为升高-降低过程,各剂量诱导的凋亡发生率峰值分别出现在照后12、8、4和4h,6和8Gy诱导的凋亡发生率已达最高水平,约为30％,10Gy诱导的凋亡反而要低。上述结果表明,诱导细胞凋亡是射线损伤骨髓造血细胞的一个重要途径,而且凋亡的发生率受照射剂量和照后时间的影响。因此,深入研究射线诱导的细胞凋亡,将有助于揭示射线损伤造血功能的机理。     

ADJUSTABILITY OF THE CIRCADIAN CLOCK IN THE COCKROACHES: A COMPARATIVE STUDY OF TWO CLOSELY,RELATED SPECIES,BLATTELLA GERMANICA AND BLATTELLA BISIGNATA

A single 2h light pulse (250 lux) was given at various times to phase shift the locomotor circadian rhythm of two species of closely related cockroaches, Blattella bisignata and Blatella germanica. The phase-response curve (PRC) of both species showed a similar pattern. Phase delays and advances were induced by light pulse during the early and late subjective night, respectively, while no clear phase shifting was elicited during the subjective day. However, the magnitude of the phase delay (1.89h ± 0.66h) and advance (0.69h ± 0.36h) of B. bisignata was significantly larger than that of B. germanica (0.78h ± 0.38h and 0.35h ± 0.18h, respectively). This result indicates the superior adjustability of the circadian clock in B. bisignata. The periodresponse curve (PdRC) was also constructed for both species. Although both species did not show great flexibility in circadian period changes, the phase shifts were significantly correlated with the period changes in the advance zone of B. bisignata (r = 0.72, P <. 1). This allowed the circadian clock of B. bisignata to display better entrainability since the phase advance adjustment was significantly more difficult than that of phase delay. The results indicate the overall adjustability of the circadian clock of B. germanica is inferior to that of B. bisignata. The significance of this finding is discussed from an ecological perspective. (Chronobiology International, 18(5), 767– 780, 2001)