Distributional migrations,expansions, and contractions of tropical plant species as revealed in dated herbarium records

Species are predicted to respond to global warming through ‘cold‐ward’ shifts in their geographic distributions due to encroachment into newly suitable habitats and/or dieback in areas that become climatically unsuitable. I conduct one of the first‐ever tests of this hypothesis for tropical plant species. I test for changes in the thermal distributions of 239 South American tropical plant species using dated herbarium records for specimens collected between 1970 and 2009. Supporting a priori predictions, many species (59%) exhibit some evidence of significant cold‐ward range shifts even after correcting for collection biases. Over 1/3 of species (35%) show significant cold‐ward movement in their hot thermal limits (mean rate of change = 0.022 °C yr^?1). Most of these species (85%; 30% of all study species) show no corresponding shift in their cold thermal limits. These unbalanced changes in the species’ thermal range limits may indicate species that are experiencing dieback due to their intolerance of rising temperatures coupled with an inability to expand into newly climatically suitable habitats. On the other hand, 25% of species show significant cold‐ward shifts in their cold thermal range limits (mean rate of change = 0.003 °C yr^?1), but 80% of these species (20% of all study species) show no corresponding shift in their hot thermal range limits. In these cases, the unbalanced shifts may indicate species that are able to ‘benefit’ under global warming, at least temporally, by both tolerating rising temperatures and expanding into new suitable habitat. An important ancillary result of this study is that the number of species exhibiting significant range shifts was greatly influenced by shifting collector biases. This highlights the need to account for biases when analyzing natural history records or other long‐term records.     

The data void in modeling current and future distributions of tropical species

Conserving biodiversity in the face of climate change requires a predictive ecology of species distributions. Nowhere is this need more acute than in the tropics, which harbor the majority of Earth's species and face rapid and large climate and land‐use changes. However, the study of species distributions and their responses to climate change in high diversity tropical regions is potentially crippled by a lack of basic data. We analyzed a database representing more than 800 000 unique geo‐referenced natural history collections to determine what fraction of tropical plant species has sufficient numbers of available collections for use in the habitat or niche models commonly used to predict species responses to climate change. We found that more than nine out of 10 species from the three principle tropical realms are so poorly collected (n < 20 records) that they are essentially invisible to modern modeling and conservation tools. In order to predict the impact of climate change on tropical species, efforts must be made to increase the amount of data available from tropical countries through a combination of collecting new specimens and digitizing existing records.     

Potential effects of future climate change on global reptile distributions and diversity

Aim

Until recently, complete information on global reptile distributions has not been widely available. Here, we provide the first comprehensive climate impact assessment for reptiles on a global scale.

Location

Global, excluding Antarctica.

Time period

1995, 2050 and 2080.

Major taxa studied

Reptiles.

Methods

We modelled the distribution of 6296 reptile species and assessed potential global and realm-specific changes in species richness, the change in global species richness across climate space, and species-specific changes in range extent, overlap and position under future climate change. To assess the future climatic impact on 3768 range-restricted species, which could not be modelled, we compared the future change in climatic conditions between both modelled and non-modelled species.

Results

Reptile richness was projected to decline significantly over time, globally but also for most zoogeographical realms, with the greatest decreases in Brazil, Australia and South Africa. Species richness was highest in warm and moist regions, with these regions being projected to shift further towards climate extremes in the future. Range extents were projected to decline considerably in the future, with a low overlap between current and future ranges. Shifts in range centroids differed among realms and taxa, with a dominant global poleward shift. Non-modelled species were significantly stronger affected by projected climatic changes than modelled species.

Main conclusions

With ongoing future climate change, reptile richness is likely to decrease significantly across most parts of the world. This effect, in addition to considerable impacts on species range extent, overlap and position, was visible across lizards, snakes and turtles alike. Together with other anthropogenic impacts, such as habitat loss and harvesting of species, this is a cause for concern. Given the historical lack of global reptile distributions, this calls for a re-assessment of global reptile conservation efforts, with a specific focus on anticipated future climate change.     

Modelling the responses of Andean and Amazonian plant species to climate change: the effects of georeferencing errors and the importance of data filtering

Aim Species distribution models are a potentially powerful tool for predicting the effects of global change on species distributions and the resulting extinction risks. Distribution models rely on relationships between species occurrences and climate and may thus be highly sensitive to georeferencing errors in collection records. Most errors will not be caught using standard data filters. Here we assess the impacts of georeferencing errors and the importance of improved data filtering for estimates of the elevational distributions, habitat areas and predicted relative extinction risks due to climate change of nearly 1000 Neotropical plant species. Location The Amazon basin and tropical Andes, South America. Methods We model the elevational distributions, or ‘envelopes’, of 932 Amazonian and Andean plant species from 35 families after performing standard data filtering, and again using only data that have passed through an additional layer of data filtering. We test for agreement in the elevations recorded with the collection and the elevation inferred from a digital elevation model (DEM) at the collection coordinates. From each dataset we estimate species range areas and extinction risks due to the changes in habitat area caused by a 4.5 °C increase in temperature. Results Amazonian and Andean plant species have a median elevational range of 717 m. Using only standard data filters inflates range limits by a median of 433 m (55%). This is equivalent to overestimating the temperature tolerances of species by over 3 °C – only slightly less than the entire regional temperature change predicted over the next 50–100 years. Georeferencing errors tend to cause overestimates in the amount of climatically suitable habitat available to species and underestimates in species extinction risks due to global warming. Georeferencing error artefacts are sometimes so great that accurately predicting whether species habitat areas will decrease or increase under global warming is impossible. The drawback of additional data filtering is large decreases in the number of species modelled, with Andean species being disproportionately eliminated. Main conclusions Even with rigorous data filters, distribution models will mischaracterize the climatic conditions under which species occur due to errors in the collection data. These errors affect predictions of the effects of climate change on species ranges and biodiversity, and are particularly problematic in mountainous areas. Additional data filtering reduces georeferencing errors but eliminates many species due to a lack of sufficient ‘clean’ data, thereby limiting our ability to predict the effects of climate change in many ecologically important and sensitive regions such as the Andes Biodiversity Hotspot.     

Global diversity patterns of larger benthic foraminifera under future climate change

Global warming threatens the viability of tropical coral reefs and associated marine calcifiers, including symbiont-bearing larger benthic foraminifera (LBF). The impacts of current climate change on LBF are debated because they were particularly diverse and abundant during past warm periods. Studies on the responses of selected LBF species to changing environmental conditions reveal varying results. Based on a comprehensive review of the scientific literature on LBF species occurrences, we applied species distribution modeling using Maxent to estimate present-day and future species richness patterns on a global scale for the time periods 2040–2050 and 2090–2100. For our future projections, we focus on Representative Concentration Pathway 6.0 from the Intergovernmental Panel on Climate Change, which projects mean surface temperature changes of +2.2°C by the year 2100. Our results suggest that species richness in the Central Indo-Pacific is two to three times higher than in the Bahamian ecoregion, which we have identified as the present-day center of LBF diversity in the Atlantic. Our future predictions project a dramatic temperature-driven decline in low-latitude species richness and an increasing widening bimodal latitudinal pattern of species diversity. While the central Indo-Pacific, now the stronghold of LBF diversity, is expected to be most pushed outside of the currently realized niches of most species, refugia may be largely preserved in the Atlantic. LBF species will face large-scale non-analogous climatic conditions compared to currently realized climate space in the near future, as reflected in the extensive areas of extrapolation, particularly in the Indo-Pacific. Our study supports hypotheses that species richness and biogeographic patterns of LBF will fundamentally change under future climate conditions, possibly initiating a faunal turnover by the late 21st century.     

Climate change and the future distributions of aquatic macrophytes across boreal catchments

Aim Aquatic–terrestrial ecotones are vulnerable to climate change, and degradation of the emergent aquatic macrophyte zone would have severe ecological consequences for freshwater, wetland and terrestrial ecosystems. Our aim was to uncover future changes in boreal emergent aquatic macrophyte zones by modelling the occurrence and percentage cover of emergent aquatic vegetation under different climate scenarios in Finland by the 2050s. Location Finland, northern Europe. Methods Data derived from different GIS sources were used to estimate future emergent aquatic macrophyte distributions in all catchments in Finland (848 in total). We used generalized additive models (GAM) with a full stepwise selection algorithm and Akaike information criterion to explore the main environmental determinates (climate and geomorphology) of emergent aquatic macrophyte distributions, which were derived from the national subclass of CORINE land‐cover classification. The accuracy of the distribution models (GAMs) was cross‐validated, using percentage of explained deviance and the area under the curve derived from the receiver‐operating characteristic plots. Results Our results indicated that emergent aquatic macrophytes will expand their distributions northwards from the current catchments and percentage cover will increase in all of the catchments in all climate scenarios. Growing degree‐days was the primary determinant affecting distributions of emergent aquatic macrophytes. Inclusion of geomorphological variables clearly improved model performance in both model exercises compared with pure climate variables. Main conclusions Emergent aquatic macrophyte distributions will expand due to climate change. Many emergent aquatic plant species have already expanded their distributions during the past decades, and this process will continue in the years 2051–80. Emergent aquatic macrophytes pose an increasing overgrowth risk for sensitive macrophyte species in boreal freshwater ecosystems, which should be acknowledged in management and conservation actions. We conclude that predictions based on GIS data can provide useful ‘first‐filter’ estimates of changes in aquatic–terrestrial ecotones.     

The future representativeness of Madagascar's protected area network in the face of climate change

With many species predicted to respond to a changing climate by shifting their distribution to climatically suitable areas, the effectiveness of static protected areas (PAs) is in question. The Madagascan PA network area has quadrupled over the past 15 years, and, although conservation planning techniques were employed to prioritise suitable areas for protection during this process, climate change impacts were not considered. We make use of species distribution models for 750 Madagascan vertebrate species to assess the potential impacts of climate change on (1) species richness across Madagascar, (2) species gain, loss and turnover in Madagascar's PAs and (3) PA network representativeness. Results indicate that Madagascar is predicted to experience substantial shifts in species richness, with most PAs predicted to experience high rates of species turnover. Provided there are no barriers to species movements, the representativeness of the current PA network will remain high for the species that are predicted to survive changes in climate by 2070, suggesting that little benefit will be gained from establishing new PAs. However, this rests on the assumption of mobility through areas currently characterised by fragmentation and anthropogenic activity, something that will require considerable expansion in conservation efforts in order to achieve.     

Beyond climate control on species range: The importance of soil data to predict distribution of Amazonian plant species

Aim

To evaluate the relative importance of climatic versus soil data when predicting species distributions for Amazonian plants and to gain understanding of potential range shifts under climate change.

Location

Amazon rain forest.

Methods

We produced species distribution models (SDM) at 5‐km spatial resolution for 42 plant species (trees, palms, lianas, monocot herbs and ferns) using species occurrence data from herbarium records and plot‐based inventories. We modelled species distribution with Bayesian logistic regression using either climate data only, soil data only or climate and soil data together to estimate their relative predictive powers. For areas defined as unsuitable to species occurrence, we mapped the difference between the suitability predictions obtained with climate‐only versus soil‐only models to identify regions where climate and soil might restrict species ranges independently or jointly.

Results

For 40 out of the 42 species, the best models included both climate and soil predictors. The models including only soil predictors performed better than the models including only climate predictors, but we still detected a drought‐sensitive response for most of the species. Edaphic conditions were predicted to restrict species occurrence in the centre, the north‐west and in the north‐east of Amazonia, while the climatic conditions were identified as the restricting factor in the eastern Amazonia, at the border of Roraima and Venezuela and in the Andean foothills.

Main conclusions

Our results revealed that soil data are a more important predictor than climate of plant species range in Amazonia. The strong control of species ranges by edaphic features might reduce species’ abilities to track suitable climate conditions under a drought‐increase scenario. Future challenges are to improve the quality of soil data and couple them with process‐based models to better predict species range dynamics under climate change.     

The future of terrestrial mammals in the Mediterranean basin under climate change

The Mediterranean basin is considered a hotspot of biological diversity with a long history of modification of natural ecosystems by human activities, and is one of the regions that will face extensive changes in climate. For 181 terrestrial mammals (68% of all Mediterranean mammals), we used an ensemble forecasting approach to model the future (approx. 2100) potential distribution under climate change considering five climate change model outputs for two climate scenarios. Overall, a substantial number of Mediterranean mammals will be severely threatened by future climate change, particularly endemic species. Moreover, we found important changes in potential species richness owing to climate change, with some areas (e.g. montane region in central Italy) gaining species, while most of the region will be losing species (mainly Spain and North Africa). Existing protected areas (PAs) will probably be strongly influenced by climate change, with most PAs in Africa, the Middle East and Spain losing a substantial number of species, and those PAs gaining species (e.g. central Italy and southern France) will experience a substantial shift in species composition.     

Protecting endemic seed plants on the Tibetan Plateau under future climate change: migration matters

AimsClimate change in the near future may become a major threat to high-altitude endemics by greatly altering their distribution. Our aims are to (i) assess the potential impacts of future climate change on the diversity and distribution of seed plants endemic to the Tibetan Plateau and (ii) evaluate the conservation effectiveness of the current National Nature Reserves (NNRs) in protecting the endemic plants in the face of climate change.     

Integrating bioclimate with population models to improve forecasts of species extinctions under climate change

Climate change is already affecting species worldwide, yet existing methods of risk assessment have not considered interactions between demography and climate and their simultaneous effect on habitat distribution and population viability. To address this issue, an international workshop was held at the University of Adelaide in Australia, 25–29 May 2009, bringing leading species distribution and population modellers together with plant ecologists. Building on two previous workshops in the UK and Spain, the participants aimed to develop methodological standards and case studies for integrating bioclimatic and metapopulation models, to provide more realistic forecasts of population change, habitat fragmentation and extinction risk under climate change. The discussions and case studies focused on several challenges, including spatial and temporal scale contingencies, choice of predictive climate, land use, soil type and topographic variables, procedures for ensemble forecasting of both global climate and bioclimate models and developing demographic structures that are realistic and species-specific and yet allow generalizations of traits that make species vulnerable to climate change. The goal is to provide general guidelines for assessing the Red-List status of large numbers of species potentially at risk, owing to the interactions of climate change with other threats such as habitat destruction, overexploitation and invasive species.     

The impact of global climate change on genetic diversity within populations and species

Genetic diversity provides the basic substrate for evolution, yet few studies assess the impacts of global climate change (GCC) on intraspecific genetic variation. In this review, we highlight the importance of incorporating neutral and non‐neutral genetic diversity when assessing the impacts of GCC, for example, in studies that aim to predict the future distribution and fate of a species or ecological community. Specifically, we address the following questions: Why study the effects of GCC on intraspecific genetic diversity? How does GCC affect genetic diversity? How is the effect of GCC on genetic diversity currently studied? Where is potential for future research? For each of these questions, we provide a general background and highlight case studies across the animal, plant and microbial kingdoms. We further discuss how cryptic diversity can affect GCC assessments, how genetic diversity can be integrated into studies that aim to predict species' responses on GCC and how conservation efforts related to GCC can incorporate and profit from inclusion of genetic diversity assessments. We argue that studying the fate of intraspecifc genetic diversity is an indispensable and logical venture if we are to fully understand the consequences of GCC on biodiversity on all levels.     

Assessing future habitat availability for coastal lowland anurans in the Brazilian Atlantic rainforest

Global warming is expected to cause several modifications to physical environments, and sea level rise is a certain outcome. However, assessment of the potential impacts caused by sea level rise on biodiversity is still emerging. Therefore, we assessed the combined impact of global warming and sea level rise on the potential distribution of 19 coastal lowland anurans in the biodiversity hotspot Atlantic Forest. We applied a correlative species distribution model (SDM) (BIOCLIM) and GIS-based spatial analyses. We evaluated the extent of changes of potential distributions under extreme and moderate global warming scenarios as well as two extreme sea level rise scenarios. Our results suggest wide areas of suitable habitat for most species in the future. However, for 15% of these species the SDMs predict massive losses of range extent as a result of a combination of global warming and sea level rise. Such observations highlight an immediate need to consider the potential effects of sea level rise in conservation action plans. Since the current potential distribution of these anuran species is likely underestimated, we also analyzed their environmental niche under current conditions in order to provide a baseline for further field surveys. Considering this current state of knowledge for such species, species distribution modeling to help gather further information on unknown species is desirable.     

Global warming will affect the maximum potential abundance of boreal plant species

Forecasting the impact of future global warming on biodiversity requires understanding how temperature limits the distribution of species. Here we rely on Liebig's Law of Minimum to estimate the effect of temperature on the maximum potential abundance that a species can attain at a certain location. We develop 95%-quantile regressions to model the influence of effective temperature sum on the maximum potential abundance of 25 common understory plant species of Finland, along 868 nationwide plots sampled in 1985. Fifteen of these species showed a significant response to temperature sum that was consistent in temperature-only models and in all-predictors models, which also included cumulative precipitation, soil texture, soil fertility, tree species and stand maturity as predictors. For species with significant and consistent responses to temperature, we forecasted potential shifts in abundance for the period 2041–2070 under the IPCC A1B emission scenario using temperature-only models. We predict major potential changes in abundance and average northward distribution shifts of 6–8 km yr⁻¹. Our results emphasize inter-specific differences in the impact of global warming on the understory layer of boreal forests. Species in all functional groups from dwarf shrubs, herbs and grasses to bryophytes and lichens showed significant responses to temperature, while temperature did not limit the abundance of 10 species. We discuss the interest of modelling the ‘maximum potential abundance’ to deal with the uncertainty in the predictions of realized abundances associated to the effect of environmental factors not accounted for and to dispersal limitations of species, among others. We believe this concept has a promising and unexplored potential to forecast the impact of specific drivers of global change under future scenarios.     

Early signs of range disjunction of submountainous plant species: an unexplored consequence of future and contemporary climate changes

Poleward and upward species range shifts are the most commonly anticipated and studied consequences of climate warming. However, these global responses to climate change obscure more complex distribution change patterns. We hypothesize that the spatial arrangement of mountain ranges and, consequently, climatic gradients in Europe, will result in range disjunctions. This hypothesis was investigated for submountainous forest plant species at two temporal and spatial scales: (i) under future climate change (between 1950–2000 and 2061–2080 periods) at the European scale and (ii) under contemporary climate change (between 1914–1987 and 1997–2013 periods) at the French scale. We selected 97 submountainous forest plant species occurring in France, among which distribution data across Europe are available for 25 species. By projecting future distribution changes for the 25 submountainous plant species across Europe, we demonstrated that range disjunction is a likely consequence of future climate change. To assess whether it is already taking place, we used a large forest vegetation‐plot database covering the entire French territory over 100 years (1914–2013) and found an average decrease in frequency (?0.01 ± 0.004) in lowland areas for the 97 submountainous species – corresponding to a loss of 6% of their historical frequency – along with southward and upward range shifts, suggesting early signs of range disjunctions. Climate‐induced range disjunctions should be considered more carefully since they could have dramatic consequences on population genetics and the ability of species to face future climate changes.     

Climate induced increases in species richness of marine fishes

Climate change has been predicted to lead to changes in local and regional species richness through species extinctions and latitudinal ranges shifts. Here, we show that species richness of fish in the North Sea, a group of ecological and socio-economical importance, has increased over a 22-year period and that this rise is related to higher water temperatures. Over eight times more fish species displayed increased distribution ranges in the North Sea (mainly small-sized species of southerly origin) compared with those whose range decreased (primarily large and northerly species). This increase in species richness can be explained from the fact that fish species richness in general decreases with latitude. This observation confirms that the interaction between large-scale biogeographical patterns and climate change may lead to increasing species richness at temperate latitudes.     

Precipitation of the warmest quarter and temperature of the warmest month are key to understanding the effect of climate change on plant species diversity in Southern African savannah

In this study, we test for the key bioclimatic variables that significantly explain the current distribution of plant species richness in a southern African ecosystem as a preamble to predicting plant species richness under a changed climate. We used 54,000 records of georeferenced plant species data to calculate species richness and spatially interpolated climate data to derive nineteen bioclimatic variables. Next, we determined the key bioclimatic variables explaining variation in species richness across Zimbabwe using regression analysis. Our results show that two bioclimatic variables, that is, precipitation of the warmest quarter (R² = 0.92, P < 0.001) and temperature of the warmest month (R² = 0.67, P < 0.001) significantly explain variation in plant species richness. In addition, results of bioclimatic modelling using future climate change projections show a reduction in the current bio‐climatically suitable area that supports high plant species richness. However, in high‐altitude areas, plant richness is less sensitive to climate change while low‐altitude areas show high sensitivity. Our results have important implications to biodiversity conservation in areas sensitive to climate change; for example, high‐altitude areas are likely to continue being biodiversity hotspots, as such future conservation efforts should be concentrated in these areas.