慢病毒载体介导的RNA干扰

RNA干扰(RNAinterference)是指由双链RNA分子抑制同源基因的表达。慢病毒载体(lentivirusvector)则是高效的基因转导工具,能将外源序列稳定导入分裂相和非分裂相细胞。将慢病毒载体和RNA干扰结合,能在哺乳动物各类细胞中,特异性抑制同源基因的表达;也是基因功能研究和基因治疗的有力手段。     

小鼠XBP1基因RNA干扰慢病毒载体的构建及筛选

目的:构建小鼠XBP1基因RNA干扰(RNA interference,RNAi)慢病毒载体,筛选具有较好干扰效率的小鼠XBP1 siRNA靶序列.方法:针对小鼠XBP1基因特异性序列,设计4个RNAi靶序列及1个阴性对照序列,合成含有正义和反义Oligo DNA的互补DNA序列,退火形成双链DNA,并克隆到经Age Ⅰ和EcoR Ⅰ酶切后的pGCL-GFP载体连接产生短发卡RNA(shRNA)慢病毒载体,PCR筛选阳性克隆,DNA测序鉴定.由病毒包装系统进行包装,经滴度测定后感染NIH3T3细胞,应用Real-time PCR鉴定干扰效率.结果:PCR鉴定与DNA测序证实合成的寡核苷酸链插入正确,293T细胞测定病毒滴度为1×108TU/ml.Real-timePCR证实XBP1-siRNA-3靶点的干扰效率最高,其干扰效率达到95%以上.结论:成功构建并筛选了小鼠XBP1基因RNAi慢病毒载体,为研究XBP1在巨噬细胞免疫功能调控中的作用奠定了基础.     

小鼠RNA干扰基因RelA慢病毒载体的构建与鉴定

目的：构建小鼠RelA 基因的RNA 干扰慢病毒载体,转染小鼠成骨样细胞并鉴定。方法：针对小鼠RelA 基因序列,设计特异 性的shRNA 序列,应用基因重组技术插入慢病毒载体GV-248。得到的重组质粒转化感受态大肠杆菌DH5-alpha,筛选得到阳性克隆 并扩大培养。所得质粒进行测序分析确定载体构建成功。重组质粒载体及包装辅助质粒转染293T 细胞,得到目的病毒并测定相 应病毒滴度。慢病毒转染MC3T3-E1 细胞后,Real-time PCR 及Western blot 检测MC3T3-E1 细胞RelA 基因及成骨相关基因 ALP、OCN、RANKL的表达。结果：成功构建小鼠RelA 基因的RNA干扰慢病毒载体,感染MC3T3-E1 细胞后,RelA 基因的表达 明显受到抑制,同时RANKL基因表达水平明显下降,ALP、OCN基因表达水平明显上升。结论：成功构建了小鼠RelA 基因的 RNA 干扰慢病毒载体。当小鼠成骨细胞RelA基因表达被干扰,NF-资B 通路被抑制后,小鼠成骨细胞成骨相关基因ALP、OCN的 表达明显上升,成骨功能增强;同时RANKL 的表达明显下降,其介导的破骨细胞骨吸收功能减弱。     

AKT2基因短发夹结构RNA慢病毒载体的构建及鉴定

目的：构建丝/苏氨酸蛋白激酶2（AKT2）基因RNA干扰（RNAi）慢病毒载体。方法：利用公用网站按照RNAi序列设计原则,设计RNAi靶点序列并合成靶序列的Oligo DNA,退火形成双链DNA,与经MluI和ClaI进行酶切后的PLVTHM载体连接产生shRNA慢病毒载体。应用shRNA慢病毒载体转染293T细胞及U87细胞,测定病毒滴度,流式细胞仪测定U87细胞的转染效率,PCR及Western blot鉴定AKT2基因在U87细胞中的下调作用。结果：成功构建了shRNA-AKT2慢病毒载体,经测序与设计合成的靶向链完全一致。荧光显微镜下观察293T细胞感染效率大于90%,病毒滴度为3.59×107TU/ml;流式细胞仪测定对AKT2细胞的转染效率为86.93%。PCR测定shRNA载体感染U87细胞后AKT2的干扰效率为68%。Western Blot结果显示该慢病毒载体对AKT2的表达有较为显著的敲减作用。结论：成功构建了人胶质瘤细胞株AKT2基因RNAi慢病毒载体,为后续的体内外功能学试验创造了条件。     

AKT2 基因短发夹结构RNA 慢病毒载体的构建及鉴定

目的:构建丝/苏氨酸蛋白激酶2(AKT2)基因RNA干扰(RNAi)慢病毒载体。方法:利用公用网站按照RNAi序列设计原则,设计RNAi靶点序列并合成靶序列的Oligo DNA,退火形成双链DNA,与经MluI和ClaI进行酶切后的PLVTHM载体连接产生shRNA慢病毒载体。应用shRNA慢病毒载体转染293T细胞及U87细胞,测定病毒滴度,流式细胞仪测定U87细胞的转染效率,PCR及Western blot鉴定AKT2基因在U87细胞中的下调作用。结果:成功构建了shRNA-AKT2慢病毒载体,经测序与设计合成的靶向链完全一致。荧光显微镜下观察293T细胞感染效率大于90%,病毒滴度为3.59×107TU/ml;流式细胞仪测定对AKT2细胞的转染效率为86.93%。PCR测定shRNA载体感染U87细胞后AKT2的干扰效率为68%。Western Blot结果显示该慢病毒载体对AKT2的表达有较为显著的敲减作用。结论:成功构建了人胶质瘤细胞株AKT2基因RNAi慢病毒载体,为后续的体内外功能学试验创造了条件。     

DPC4／Smad4基因RNA干扰靶点设计和慢病毒载体制备

目的：DPC4／Smad4基因RNA干扰靶点的设计和RNA干扰靶点慢病毒载体制备。方法：针对DPC4／Smad4基因序列,并利用网站设计程序,依据RNA干扰序列设计的原则,设计多个RNA干扰靶点序列。根据设计经验和设计软件将其进行评估测定,选择最佳动力学参数靶点进入其后续的实验流程;生工生物合成含干扰序列的DNAoligo,具有严格的检测体系（PAGE纯化体系）,其两端含酶切位点粘端,直接连入酶切后的RNA干扰载体上。将连接好的产物转入制备好的细菌感受态细胞,并且对长出的克隆进行酶切鉴定。然后挑选出阳性克隆测序,进行测序比对后,鉴定阳性的克隆即为构建成功的目的基因RNA干扰慢病毒载体。将构建的慢病毒载体以及辅助包装载体质粒共转染到293T细胞。收获含有病毒的细胞培养上清,浓缩后进行滴度测定,并检测其感染性。另外应用荧光实时定量PCR检测在感染的293T细胞中敲减效果。结果：成功构建DPC4／Smad4shRNA的慢病毒载体LVshSmad4,并成功制备DPC4／Smad4shRNA慢病毒,三株病毒感染细胞后均具有有效的敲减效应,其中SHl最为显著。结论：DPC4／Smad4基因RNA干扰靶点的成功设计和RNA干扰靶点慢病毒制备,为以后探讨DPC4／Smad4基因与肿瘤的相关性治疗提供了实验基础。     

DPC4/Smad4基因RNA干扰靶点设计和慢病毒载体制备*

摘要目的：DPC4/Smad4 基因RNA干扰靶点的设计和RNA 干扰靶点慢病毒载体制备。方法：针对DPC4/Smad4基因序列,并利 用网站设计程序,依据RNA干扰序列设计的原则,设计多个RNA干扰靶点序列。根据设计经验和设计软件将其进行评估测定, 选择最佳动力学参数靶点进入其后续的实验流程;生工生物合成含干扰序列的DNA oligo,具有严格的检测体系（PAGE 纯化体 系）,其两端含酶切位点粘端,直接连入酶切后的RNA干扰载体上。将连接好的产物转入制备好的细菌感受态细胞,并且对长出 的克隆进行酶切鉴定。然后挑选出阳性克隆测序,进行测序比对后,鉴定阳性的克隆即为构建成功的目的基因RNA 干扰慢病毒 载体。将构建的慢病毒载体以及辅助包装载体质粒共转染到293T 细胞。收获含有病毒的细胞培养上清,浓缩后进行滴度测定,并 检测其感染性。另外应用荧光实时定量PCR 检测在感染的293T细胞中敲减效果。结果：成功构建DPC4/Smad4 shRNA的慢病毒 载体LVshSmad4,并成功制备DPC4/Smad4 shRNA慢病毒,三株病毒感染细胞后均具有有效的敲减效应,其中SH1 最为显著。结 论：DPC4/Smad4 基因RNA干扰靶点的成功设计和RNA 干扰靶点慢病毒制备,为以后探讨DPC4/Smad4 基因与肿瘤的相关性治 疗提供了实验基础。     

p300基因小干扰RNA慢病毒载体的构建及其对乳腺癌ZR75-1细胞的影响

目的:构建p300基因的小干扰RNA(siRNA)慢病毒表达载体,检测其对p300蛋白表达的干扰,以及对乳腺癌细胞ZR75-1生长的影响。方法:利用RNA干扰(RNAi)技术设计并合成针对p300基因的siRNA,并将其克隆到siRNA表达载体pSIH-H1上,经酶切和测序验证,用293T人胚肾细胞包装p300 siRNA慢病毒,感染乳腺癌细胞ZR75-1,建立敲低p300表达的稳定细胞株,通过实时定量PCR和Western印迹检验RNAi的干扰效果,利用细胞生长实验检测p300 siRNA对ZR75-1细胞生长的影响。结果:酶切和测序证明构建了p300 siRNA真核表达载体;实时定量PCR和Western印迹证明构建的siRNA能有效抑制p300基因的表达,并建立了敲低p300表达的稳定细胞株;细胞生长实验证实p300 siRNA可有效促进ZR75-1细胞的生长。结论:构建了p300基因的siRNA真核表达载体,转染细胞后能有效抑制p300基因的表达,且能促进ZR75-1细胞的生长,表明构建的p300 siRNA具有功能。     

EGFL7 基因RNAi慢病毒表达载体的构建及鉴定

目的：构建人类表皮生长因子域7（EGFL7）基因RNA干扰（RNAi）重组慢病毒表达载体。方法：参照小分子干扰RNA 的设 计原则,应用OligoDesigner 3.0 软件设计三条靶向人EGFL7 基因的RNA干扰序列（hEGFL7-RNAi）,并将其分别插入含有绿色 荧光蛋白（GFP）的慢病毒载体pLV3 中,获得重组质粒,与包装质粒pRsv-REV、pMDlg-pRRE 和pMD2G共同转染293T细胞,包 装产生重组慢病毒,培养72 h后,应用qRT-PCR 检测慢病毒感染人脐静脉内皮细胞（HUVEC）后靶基因mRNA 的水平,以评价 其基因沉默效果。结果：筛选出3 条人EGFL7 基因的RNAi 序列,分别包装出重组慢病毒,其滴度分别为1× 108、2× 108和5× 108TU/mL,将其转染入HUVEC 后,EGFL7mRNA表达均受到明显抑制(P<0.05)。结论：成功筛选出三条针对人EGFL7基因的 RNAi有效靶序列,并成功构建重组慢病毒表达载体,证明该序列可沉默HUVECs 中EGFL7 基因的表达。     

CX3CL1 RNA干扰慢病毒载体的构建包装与鉴定

摘要 目的：构建包装趋化因子CX3C的配体1（CX3CL1）RNA干扰慢病毒载体。方法：参考目的基因CX3CL1序列,设计PCR引物扩增相应的干扰序列,然后将干扰序列连接至pLVX-shRNA2酶切后的线性化载体上,通过酶切及测序鉴定获得阳性克隆,即为构建成功的pLVX-shRNA2-CX3CL1慢病毒干扰载体。将构建好的慢病毒干扰载体同慢病毒包装载体共同转染293T细胞,收集上清,纯化浓缩后即为pLVX-shRNA2-CX3CL1慢病毒。最后将慢病毒感染BMSCs细胞,QPCR检测慢病毒的干扰效率。结果：经过酶切能切出大小约为6500bp和1350bp的两条带,获得与预期结果相一致的DNA片段,并通过测序验证了序列的准确性,成功构建CX3CL1 RNA慢病毒干扰载体。然后经过包装、纯化浓缩后得到pLVX-shRNA2-CX3CL1慢病毒。QPCR结果表明干扰组明显抑制了CX3CL1mRNA的表达,干扰效率在70%以上。结论：成功构建包装CX3CL1干扰慢病毒载体,并证实其显著沉默了BMSCs细胞CX3CL1的表达,为CX3CL1在BMSCs移植的大鼠缺血性脑卒中炎症反应的机制研究奠定基础。     

A disintegrin and metalloproteinase (ADAM)-mediated ectodomain shedding of ADAM10

A disintegrin and metalloproteinase (ADAM) 10 is a type I transmembrane glycoprotein responsible for the ectodomain shedding of a range of proteins including the amyloid precursor protein implicated in Alzheimer's disease. In this study we demonstrate that ADAM10 itself is subject to shedding by one or more ADAMs. Expression of epitope-tagged wild-type ADAM10 in SH-SY5Y cells enabled the detection of a soluble ectodomain in conditioned medium. Shedding of the ADAM10 ectodomain was inhibited by a known ADAM inhibitor with a reciprocal accumulation of the full-length mature protein in both cell lysates and extracellular membrane vesicles. Shedding was also stimulated by phorbol ester treatment of cells. A glycosylphosphatidylinositol-anchored form of ADAM10 lacking the cytosolic, transmembrane and α-helical juxtamembrane regions of the wild-type protein was shed in a similar manner. Furthermore, a truncated soluble ADAM10 construct, although correctly post-translationally processed and catalytically active against a synthetic peptide substrate, was incapable of shedding cell-associated amyloid precursor protein. Finally, we show that ADAM9 is, at least in part, responsible for the ectodomain shedding of ADAM10. In conclusion, this is a new mechanism by which levels of ADAM10 are regulated and may have implications in a range of human diseases including Alzheimer's disease.     

Identification of ADAM10 as a major TNF sheddase in ADAM17-deficient fibroblasts

ADAM17 (a disintegrin and metalloprotease)-deficient murine fibroblasts stably transfected with proTNF cDNA release significant amounts of biologically active soluble TNF. The enzyme responsible for this activity is a membrane protein that hydrolyzes the peptide bond Ala⁷⁶:Val⁷⁷ within proTNF. Its activity is inhibited by 1,10-phenantroline and GM6001, insusceptible to TIMP-2 (tissue inhibitor of metalloproteinases-2), and stimulated by ionomycin. These characteristics match ADAM10. The moderate silencing of ADAM10 by shRNA resulted in a significant inhibition of TNF shedding. There was no correlation between the level of ADAM10 expression and the presence of active ADAM17. Our results indicate that ADAM10 may function as the TNF sheddase in cells which lack ADAM17 activity.     

小鼠Smad6基因RNAi慢病毒载体的构建与鉴定

构建小鼠Smad6基因RNA干扰（RNAi）慢病毒载体,有效沉默骨髓树突状细胞（BMDC）的Smad6基因表达,为构建骨髓致耐受DC用于哮喘等自身免疫疾病的研究。设计小鼠Smad6 shRNA序列,合成、退火,得到双链DNA,与经酶切后的Psih1-H1-copGFP shRNA Vector载体连接产生LV-shSmad6慢病毒载体,并测序鉴定。转染293TN细胞,包装产生慢病毒,测定滴度。感染小鼠骨髓树突细胞,检测Smad6基因的表达状况成功构建Smad6 shRNA的慢病毒载体LV-shSmad6。包装慢病毒,并显著抑制Smad6 mRNA水平及蛋白水平的表达。成功构建出小鼠Smad6基因shR-NA慢病毒载体,为后期研究Smad6基因在哮喘发病机制及新治疗方法提供了稳定的转染细胞载体。     

用慢病毒转染RNAi技术沉默胆固醇7α羟化酶的基因表达，降低肝细胞中胆汁酸的分泌

为了降低生物人工肝(bioartificial liver system)中肝细胞胆汁酸的分泌,构建了胆固醇7α羟化酶慢病毒RNA干涉载体,并转染人肝脏细胞(L-02).根据绿色荧光蛋白的表达评估转染效率后进行流式分选,获得高表达慢病毒干涉载体的细胞,并以野生型L-02细胞和仅转染pSicoR空载体的L-02细胞作对照,观察肝细胞胆固醇7α羟化酶的表达以及培养上清中总胆汁酸含量.利用半定量PCR、实时荧光定量PCR及Western-blot等实验方法检测了转染细胞中基因的干涉效果,结果显示:与对照组相比,在mRNA水平,转染慢病毒siRNA载体的L-02细胞,其胆固醇7α羟化酶基因的表达量仅为野生型L-02细胞表达量的31.2%,为转染pSicoR空载体的L-02细胞的34.1%,干涉效率分别为68.8%和65.9%,均具有显著差异(P＜0.05);Western-blot结果显示胆固醇7α羟化酶在蛋白质水平表达也明显受到抑制,表明转染慢病毒siRNA下调了肝细胞中胆固醇7α羟化酶基因的表达,减少了胆汁酸的分泌.以上研究结果表明,利用RNAi技术可以获得低表达胆固醇7α羟化酶基因的肝细胞,并有效降低肝细胞中胆汁酸的分泌,为临床上生物人工肝的构建及应用奠定基础.     

Functional analysis of cholesterol biosynthesis by RNA interference

Inborn errors of cholesterol biosynthesis caused by dysfunctionality of single enzymes are known to cause severe malformation syndromes like X-linked chondrodysplasia punctata (CDPX2), CHILD syndrome or Smith–Lemli–Opitz-syndrome (SLOS). In this study we established the method of RNA interference (RNAi) for analyzing the molecular mechanisms underlying disrupted cholesterol biosynthesis. For different genes involved in the cholesterol biosynthesis pathway-NAD(P) dependent steroid dehydrogenase-like (NSDHL), 17-beta hydroxysteroid dehydrogenase type 7 (HSD17B7) and emopamil binding protein (EBP)-shRNA sequences were designed and tested for their effectiveness. For a better comparability of the experiments and to avoid different transfection efficiencies, examined shRNA sequences which reached a knock down of at least 80% were stably transfected in a HeLa cell line with a tetracycline-regulated expression (HeLa T-REx). These stable transfected cell lines represent novel tools for the analysis of cholesterol biosynthesis.     

Rutaecarpine prevents hypertensive cardiac hypertrophy involving the inhibition of Nox4‐ROS‐ADAM17 pathway

Rutaecarpine attenuates hypertensive cardiac hypertrophy in the rats with abdominal artery constriction (AAC); however, its mechanism of action remains largely unknown. Our previous study indicated that NADPH oxidase 4 (Nox4) promotes angiotensin II (Ang II)‐induced cardiac hypertrophy through the pathway between reactive oxygen species (ROS) and a disintegrin and metalloproteinase‐17 (ADAM17) in primary cardiomyocytes. This research aimed to determine whether the Nox4‐ROS‐ADAM17 pathway is involved in the protective action of rutaecarpine against hypertensive cardiac hypertrophy. AAC‐induced hypertensive rats were adopted to evaluate the role of rutaecarpine in hypertensive cardiac hypertrophy. Western blotting and real‐time PCR were used to detect gene expression. Rutaecarpine inhibited hypertensive cardiac hypertrophy in AAC‐induced hypertensive rats. These findings were confirmed by the results of in vitro experiments that rutaecarpine significantly inhibited Ang II‐induced cardiac hypertrophy in primary cardiomyocytes. Likewise, rutaecarpine significantly suppressed the Nox4‐ROS‐ADAM17 pathway and over‐activation of extracellular signal‐regulated kinase (ERK) 1/2 pathway in the left ventricle of AAC‐induced hypertensive rats and primary cardiomyocytes stimulated with Ang II. The inhibition of Nox4‐ROS‐ADAM17 pathway and over‐activation of ERK1/2 might be associated with the beneficial role of rutaecarpine in hypertensive cardiac hypertrophy, thus providing additional evidence for preventing hypertensive cardiac hypertrophy with rutaecarpine.     

Connective tissue growth factor is a substrate of ADAM28

ADAM28, a member of the ADAM (a disintegrin and metalloproteinase) gene family, is over-expressed by carcinoma cells and the expression correlates with carcinoma cell proliferation and progression in human lung and breast carcinomas. However, information about substrates of ADAM28 is limited. We screened interacting molecules of ADAM28 in human lung cDNA library by yeast two-hybrid system and identified connective tissue growth factor (CTGF). Binding of CTGF to proADAM28 was demonstrated by yeast two-hybrid assay and protein binding assay. ADAM28 cleaved CTGF in dose- and time-dependent manners at the Ala¹⁸¹-Tyr¹⁸² and Asp¹⁹¹-Pro¹⁹² bonds in the hinge region of the molecule. ADAM28 selectively digested CTGF in the complex of CTGF and vascular endothelial growth factor₁₆₅ (VEGF₁₆₅), releasing biologically active VEGF₁₆₅ from the complex. RT-PCR and immunohistochemical analyses demonstrated that ADAM28, CTGF and VEGF are commonly co-expressed in the breast carcinoma tissues. These data provide the first evidence that CTGF is a novel substrate of ADAM28 and suggest that ADAM28 may promote VEGF₁₆₅-induced angiogenesis in the breast carcinomas by the CTGF digestion in the CTGF/VEGF₁₆₅ complex.