Quantifying regional biodiversity in the tropics: A case study of freshwater fish in Trinidad and Tobago

Extinction rates are predicted to accelerate during the Anthropocene. Quantifying and mitigating these extinctions demands robust data on distributions of species and the diversity of taxa in regional biotas. However, many assemblages, particularly those in the tropics, are poorly characterized. Targeted surveys and historical museum collections are increasingly being used to meet the urgent need for accurate information, but the extent to which these contrasting data sources support meaningful inferences about biodiversity change in regional assemblages remains unclear. Here, we seek to elucidate uncertainty surrounding regional biodiversity estimates by evaluating the performance of these alternative methods in estimating the species richness and assemblage composition of the freshwater fish of Trinidad & Tobago. We compared estimates of regional species richness derived from two freshwater fish datasets: a targeted two year survey of Trinidad & Tobago rivers and historical museum collection records submitted to The University of the West Indies Zoology Museum. Richness was estimated using rarefaction and extrapolation, and assemblage composition was benchmarked against a recent literature review. Both datasets provided similar estimates of regional freshwater fish species richness (50 and 46 species, respectively), with a large overlap (85%) in species identities. Regional species richness estimates based on survey and museum data are thus comparable, and consistent in the species they include. Our results suggest that museum collection data are a viable option for setting reliable baselines in many tropical systems, thereby widening options for meaningful monitoring and evaluation of temporal trends. Abstract in Spanish is available with online material.     

Hidalgo Fishes: Dataset on freshwater fishes of Hidalgo state (Mexico) in the MZNA fish collection of the University of Navarra (Spain)

The state of Hidalgo (Mexico) is an important region from the point of view of biodiversity. However, there exists a significant gap in accessible knowledge about species diversity and distribution, especially regarding to freshwater ecosystems. This dataset comprises the sampling records of two projects developed in Hidalgo between 2007 and 2009 about the freshwater fish communities of Tecocomulco lake and rivers belonging to the Metztitlán Canyon Biosphere Reserve. It contains the taxonomic identity (species level) and basic biometric data (total length and weight) as well as date of collection and coordinates of more than 9000 specimens. This dataset is the primary result of the first and unrepeated exhaustive freshwater fish’s survey of Metztitlán Canyon Biosphere Reserve and Tecocomulco lake. It incorporates seven more species to the regional fish fauna, and new exclusive biometric data of ten species. This dataset can be used by studies dealing with, among other interests, North American freshwater fish diversity (species richness, distribution patterns) and biometric analyses, useful for the management and conservation of these areas. The complete dataset is also provided in Darwin Core Archive format.     

Invaders are not a random selection of species

We assembled information on 119 species of freshwater macroinvertebrate invaders in North America and Europe, and compared them to all native freshwater species in North America and Europe. We tested whether the invaders were a random or selected group among taxa (phylum or class), water quality requirements, and feeding habit. We found that freshwater macroinvertebrate invaders are not a random selection of species, and are over-represented by molluscs and crustaceans, while taxa richness of native communities are dominated by insects. Over 35% of native species of aquatic invertebrates in North America are only able to live in areas with excellent or very good water quality, and are intolerant of organic pollution. In contrast, all invaders are tolerant of at least moderate amounts of organic pollution. There was a significant difference in the distribution of feeding habits between native species and invaders: collector-filterers (including suspension feeders) were 2.5–3 times more abundant, and predators were 3–4 times less abundant among invaders than among native invertebrates. The ongoing spread of exotic species affects the biodiversity of selected taxa, shifts communities toward greater tolerance of organic pollution and increases the numbers of suspension feeders, thereby enhancing benthic pelagic coupling in waterbodies with high densities of invaders. Because these processes are very similar in Europe and North America, we suggest that the observed patterns may have a common global effect.     

Biodiversity in Mediterranean-climate streams of California

Although the California mediterranean climate region is widely considered a biodiversity hotspot for terrestrial plants and vertebrates, freshwater biodiversity in this region is generally not well known. Using information from museum specimen databases, published literature, biological assessment surveys, and specialist’s knowledge, we review freshwater biodiversity for several groups of stream organisms in the med-climate region of California, which includes 2,220 species in 292 families. The groups with the highest diversity of lotic species are aquatic insects and diatoms, which comprise 39 and 36 % of species in our lists, respectively. Sequential floods and drying periods limit the overall biodiversity of many stream organisms in California mediterranean rivers, and continued climate and land-use change may cause disproportionate biodiversity declines in the region. However, only 4 % of lotic species have been evaluated in the IUCN Red List of Threatened Species, and many assessments are outdated. Future development of online databases for botanical and zoological collections will significantly enhance biodiversity and distribution knowledge. This information will enable us to more accurately and efficiently assess the effects of global change on biodiversity of freshwater organisms, to evaluate conservation status of individual taxa, and to set conservation priorities for stream ecosystems.     

Global species richness of hydrobiid snails determined by climate and evolutionary history

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Comparative biodiversity of crustaceans and aquatic insects from various water body types in coastal Mediterranean wetlands

Coastal wetlands are characterized by a high biodiversity. At the same time, biodiversity is one of the main criteria used to establish protection policy priorities, or to propose management actions. In this study, crustacean and aquatic insect species richness in the Empordà wetlands was investigated. These two groups contribute in an important way to the total biodiversity, and still they are seldom taken into account in the management of natural areas. Representative samples (38 points) of all aquatic water body types in the Empordà wetlands were taken monthly (dip net with 250 μm mesh). Sampling was carried out between 1996 and 2000, but until present, only qualitative data have been extracted. A rich fauna of 125 crustacean taxa and 295 aquatic insect taxa were found. Some environments were characterized by low richness and high singularity (isolated artesian freshwater springs), some by high richness and high singularity (estuarine waters, brackish and meso-eutrophic freshwater wetlands), and others by low richness and low singularity (hypertrophic freshwater wetlands and hyperhaline wetlands). Factors determining singularity and richness are discussed. Comparison with crustacean richness of other western Mediterranean wetlands showed a similar high species richness in our study sites, probably due to high spatial heterogeneity of these areas.     

The Erwin equation of biodiversity: From little steps to quantum leaps in the discovery of tropical insect diversity

Almost 40 years ago, Terry L. Erwin published a seemingly audacious proposition: There may be as many as 30 million species of insects in the world. Here, we translate Erwin's verbal argument into a diversity-ratio model—the Erwin Equation of Biodiversity—and discuss how it has inspired other biodiversity estimates. We categorize, describe the assumptions for, and summarize the most commonly used methods for calculating estimates of global biodiversity. Subsequent diversity-ratio extrapolations have incorporated parameters representing empirical insect specialization ratios, and how insect specialization changes at different spatial scales. Other approaches include macroecological diversity models and diversity curves. For many insect groups with poorly known taxonomies, diversity estimates are based on the opinions of taxonomic experts. We illustrate our current understanding of insect diversity by focusing on the six most speciose insect orders worldwide. For each order, we compiled estimates of the (a) maximum estimated number of species, (b) minimum estimated number of species, and (c) number of currently described species. By integrating these approaches and considering new information, we believe an estimate of 5.5 million species of insects in the world is much too low. New molecular methodologies (e.g., metabarcoding and NGS studies) are revealing daunting numbers of cryptic and previously undescribed species, at the same time increasing our precision but also uncertainty about present estimates. Not until technologies advance and sampling become more comprehensive, especially of tropical biotas, will we be able to make robust estimates of the total number of insect species on Earth.     

Emerging threat of the 21st century lightscape to global biodiversity

Over the last century the temporal and spatial distribution of light on Earth has been drastically altered by human activity. Despite mounting evidence of detrimental effects of light pollution on organisms and their trophic interactions, the extent to which light pollution threatens biodiversity on a global scale remains unclear. We assessed the spatial extent and magnitude of light encroachment by measuring change in the extent of light using satellite imagery from 1992 to 2012 relative to species richness for terrestrial and freshwater mammals, birds, reptiles, and amphibians. The encroachment of light into previously dark areas was consistently high, often doubling, in areas of high species richness for all four groups. This pattern persisted for nocturnal groups (e.g., bats, owls, and geckos) and species considered vulnerable to extinction. Areas with high species richness and large increases in light extent were clustered within newly industrialized regions where expansion of light is likely to continue unabated unless we act to conserve remaining darkness. Implementing change at a global scale requires global public, and therefore scientific, support. Here, we offer substantial evidence that light extent is increasing where biodiversity is high, representing an emerging threat to global biodiversity requiring immediate attention.     

Does host‐plant diversity explain species richness in insects? A test using Coccidae (Hemiptera)

1. The megadiverse herbivores and their host plants are a major component of biodiversity, and their interactions have been hypothesised to drive the diversification of both. 2. If plant diversity influences the diversity of insects, there is an expectation that insect species richness will be strongly correlated with host‐plant species richness. This should be observable at two levels (i) more diverse host‐plant groups should harbour more species of insects, and (ii) the species richness of a group of insects should correlate with the richness of the host groups it uses. However, such a correlation is also consistent with a hypothesis of random host use, in which insects encounter and use hosts in proportion to the diversity of host plants. Neither of these expectations has been widely tested. 3. These expectations were tested using data from a species‐rich group of insects – the Coccidae (Hemiptera). 4. Significant positive correlations were found between the species richness of coccid clades (genera) and the species richness of the host‐plant family or families upon which the clades occur. On a global scale, more closely related plant families have more similar communities of coccid genera but the correlation is weak. 5. Random host use could not be rejected for many coccids but randomisation tests and similarity of coccid communities on closely related plant families show that there is non‐random host use in some taxa. Overall, our results support the idea that plant diversity is a driver of species richness of herbivorous insects, probably via escape‐and‐radiate or oscillation‐type processes.     

Concordance of species richness patterns among multiple freshwater taxa: a regional perspective

Geographical gradients in species richness and the degree to which different taxa show congruent patterns remain unknown for many taxonomic groups. Here, I examined broad-scale species richness patterns in five groups of freshwater organisms; macrophytes, dragonflies, stoneflies, aquatic beetles and fishes. The analyses were based on provincial distribution records in Denmark, Norway, Sweden and Finland. In general, variation in species richness across provinces was concordant among the groups, but stoneflies showed weaker negative relationships with the other taxonomic groups. Species richness in most groups decreased with increasing latitude and altitude, and a considerable part of the variation was explained by mean July temperature. However, stoneflies showed a reversed pattern, with species richness correlating positively, albeit more weakly, with mean provincial altitude. Nevertheless, combined species richness of all five taxa showed a strong relationship with mean July temperature, accounting for 74% of variation in provincial species richness alone. Such temperature-controlled patterns suggest that regional freshwater biodiversity will strongly respond to climate change, with repercussions for local community organization in freshwater ecosystems in Fennoscandia.     

On the brink of extinction? How climate change may affect global chelonian species richness and distribution

Anthropogenic global climate change has already led to alterations in biodiversity patterns by directly and indirectly affecting species distributions. It has been suggested that poikilothermic animals, including reptiles, will be particularly affected by global change and large‐scale reptile declines have already been observed. Currently, half of the world's freshwater turtles and tortoises are considered threatened with extinction, and climate change may exacerbate these declines. In this study, we assess how global chelonian species richness will change in the near future. We use species distribution models developed under current climate conditions for 78% of all extant species and project them onto different Intergovernmental Panel on Climate Change (IPCC) scenarios for 2080. We detect a strong dependence of temperature shaping most species ranges, which coincide with their general temperature‐related physiological traits (i.e., temperature‐dependent sex determination). Furthermore, the extent and distribution of the current bioclimatic niches of most chelonians may change remarkably in the near future, likely leading to a substantial decrease of local species abundance and ultimately a reduction in species richness. Future climatic changes may cause the ranges of 86% of the species to contract, and of these ranges, nearly 12% are predicted to be situated completely outside their currently realized niches. Hence, the interplay of increasing habitat fragmentation and loss due to climatic stress may result in a serious threat for several chelonian species.     

Indicators for plant species richness in pine (<Emphasis Type="Italic">Pinus sylvestris</Emphasis> L.) forests of Germany

Forestry is obliged to record as well as maintain and/or enhance biological diversity in forests due to national and international agreements. Accordingly, it is necessary to work out methodological approaches for the assessment of biodiversity in forests. In the study presented here, we focus on the total plant species pool (563 vascular plant and bryophyte species) of pine (Pinus sylvestris L.) forests in NE Germany to identify indicators for plant species richness. We distinguished several groups like “herb”, “grass-like”, “woody”, “endangered”, and “exotic species”, for which we detected indicators for low (class #1), intermediate (class #2), and high (class #3) species numbers. From a total of 84 species, which were identified by a three-step procedure, most indicators were found for class #3. Only few indicators have been revealed for intermediate species numbers, i.e. class #2. With help of Ellenberg’s ecological indicator values and information on the main occurrence in Central European vegetation types and plant communities, respectively, we characterized the indicator species ecologically. The ecological site preferences of the indicator species in general reflect the fact that species richness is highest in base-rich, light, and anthropogenically disturbed pine forests. On the contrary, species-poor forests were revealed by indicators, which mainly occur on acidic sites. It is concluded that a considerable set of indicators for species richness can help facilitate biodiversity assessments in forestry and ecosystem restoration practice. Electronic Supplementary Material  The online version of this article (doi: ) contains supplementary material, which is available to authorized users.     

Marine, intertidal, freshwater and terrestrial biodiversity of an isolated polar archipelago

Aim We ask how biodiverse is a polar archipelago; how this faunal richness is spread across marine, intertidal, freshwater, terrestrial and parasitic realms; and how fast species are accumulated with increased sampling effort. Location The South Orkney Islands (SOI), Scotia Arc, Southern Ocean. Methods We sampled mega‐ and macro‐benthos at the SOI using scuba in the shallows (0–10 m), a rough bottom otter trawl at 150–250 m and an Agassiz trawl and epibenthic sledge, both at depths of 200, 500, 1000 and 1500 m. We also collated species occurrence at the SOI in each realm from a century of literature and modern databases to investigate patterns in species accumulation, endemism, faunistic affinities and bathymetric ranges in three model taxa. Results Our 11 benthic samples showed that point biodiversity at the SOI is high, yielding 19 classes and 158 species. Nearly a third were new to the area, whilst five species and one genus were new to science. The shallowest samples were richest but had fewest new records of species. Known richness at the SOI is dominated by marine species (1026), of which 821 (83.3%) were benthic. Across all realms, 1224 species (50 classes, 24 phyla) were recorded, of which 43 were intertidal, 64 freshwater, 100 terrestrial, 60 parasitic and 40 birds. Species accumulation curves for model taxa showed new sampling yields about 0.75% per sample of known benthic richness, so by Antarctic standards we know the SOI quite well. Most species are Southern Ocean endemics, but very few occur only at the SOI. Main conclusions This first estimate of faunal biodiversity of a polar locality demonstrates both high richness and high levels of knowledge at the SOI. As suspected but never quantified, the benthos dominates polar biodiversity, at least at the SOI. Marine species there constitute 20% of those recently listed for the entire Southern Ocean, whilst > 60% of terrestrial species are known from Antarctica. The SOI, being one of the better‐studied polar locations, of known age and with a discrete shelf, represent an important source of comparison for biodiversity studies. Our data clearly show that richness and our knowledge of the polar fauna differ across environments.     

Assessment of the relationships of geographic variation in species richness to climate and landscape variables within and among lineages of North American freshwater fishes

Aim Geographic variation in species richness is a well‐studied phenomenon. However, the unique response of individual lineages to environmental gradients in the context of general patterns of biodiversity across broad spatial scales has received limited attention. The focus of this research is to examine relationships between species richness and climate, topographic heterogeneity and stream channel characteristics within and among families of North American freshwater fishes. Location The United States and Canada. Methods Distribution maps of 828 native species of freshwater fishes were used to generate species richness estimates across the United States and Canada. Variation in species richness was predicted using spatially explicit models incorporating variation in climate, topography and/or stream channel length and stream channel diversity for all 828 species as well as for the seven largest families of freshwater fishes. Results The overall gradient of species richness in North American freshwater fishes is best predicted by a model incorporating variables describing climate and topography. However, the response of species richness to particular climate or landscape variables differed among families, with models possessing the highest predictive ability incorporating data on climate, topography and/or stream channel characteristics within a region. Main conclusions The correlations between species richness and abiotic variables suggest a strong influence of climate and physical habitat on the structuring of regional assemblages of North American freshwater fishes. However, the relationship between these variables and species richness varies among families, suggesting the importance of phylogenetic constraints on the regulation of geographic distributions of species.     

Patterns of composition and species richness of crustaceans and aquatic insects along environmental gradients in Mediterranean water bodies

Differences in the dynamics of ecological processes between Mediterranean and colder temperate aquatic systems could imply different patterns in faunal communities in terms of composition and biodiversity (i.e. species richness and rarity). In order to identify some of these patterns the crustacean and aquatic insect composition and biodiversity of four water body types, classified according to their salinity and water permanence, were compared. Moreover, the relationships between species richness and water, pond and landscape variables were analysed. A total number of 91 water bodies located throughout Catalunya (NE Iberian Peninsula) were sampled. Three species assemblages were observed: one for permanent freshwaters, another for temporary freshwaters, and a third one for saline waters (SW), since permanent and temporary saline water bodies had similar composition. Differences in salinity were associated with proportion of crustaceans versus insects and with singularity. Thus, saline ponds had a higher proportion of crustaceans, and lower values of singularity. Conductivity was significantly related to total (crustaceans plus insects) richness, and also related to insect richness. The main difference between the models obtained for crustacean species richness and insect species richness is the significance of landscape variables in the latter, and this fact could be related to the different dispersion types of these two faunal groups: active for insects versus passive for crustaceans. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: R. Céréghino, J. Biggs, B. Oertli & S. Declerck The ecology of European ponds: defining the characteristics of a neglected freshwater habitat     

中国生物物种编目进展与展望

发现并描述地球上的生物物种, 建立可靠的生物分类系统, 编制权威且具有时效性的生物物种名录, 实现生物物种多样性信息的数字化和共享, 对于生物多样性科学研究、资源管理、科学决策和社会经济发展都有重要意义。在全球和区域层面, 生物物种编目工作越来越被重视, 也取得了一些可喜的进展。为反映中国生物物种编目工作近些年取得的成绩, 本文联合各相关类群的专家, 分别总结了脊椎动物、昆虫和其他无脊椎动物、植物、菌物等主要类群的物种编目进展情况, 并就将来如何更好地促进生物编目工作的开展提出了展望。现有数据显示, 中国已记录哺乳动物698种, 鸟类1,450种, 爬行类586种, 两栖类611种, 淡水鱼类1,591种, 高等植物38,493种(其中维管植物35,379种), 菌物约27,900种, 但尚无全面的包括所有昆虫和无脊椎动物的物种名录。近10年, 中国新增维管植物5个新科、86个新属、2,090个新种、374个新记录; 新增菌物新物种4,679个, 隶属于36纲140目438科1,372属。     

Plantations of exotic tree species in Britain: irrelevant for biodiversity or novel habitat for native species?

Novel or emergent ecosystems arising from human action present both threats and opportunities for biodiversity. It has been suggested that exotic species can “facilitate” or “inhibit” native biodiversity through habitat modification. In Britain, there is a discussion over the contribution to biodiversity of plantations of exotic conifer species as these are commonly thought to have little relevancy as a habitat for native biodiversity. To address this we compared the species richness of a range of different taxonomic groups (lichens, bryophytes, fungi, vascular plants, invertebrates and songbirds) in exotic and native forest stands of differing structural stages in northern and southern Britain. In terms of overall native species-richness there was no significant difference between the exotic and the native stands. In the north, six species groups showed higher values in the exotic Sitka spruce (Picea sitchensis) stands with the remaining six showing higher values in the native Scots pine (Pinus sylvestris) stands. Most notably, lichen species richness was much lower in the exotic stands compared to the native stands, whereas bryophyte and fungal species richness was proportionately higher in the exotic stands. In the south, five species groups (all invertebrate taxa) showed higher species richness in exotic Norway spruce (Picea abies) stands compared to native oak (Quercus robur) stands. Five species groups had higher species-richness in the oak stands, in particular lichens and fungi. It is concluded that emergent ecosystems of exotic conifer species are not irrelevant to biodiversity. Where already well-established they can provide habitat for native species particularly if native woodland is scarce and biodiversity restoration is an immediate priority.     

Local–regional species richness relationships are linear at very small to large scales in west-central Pacific corals

If local communities are saturated with species, the relationship between local and regional species richness [the local species richness (LSR)–regional species richness (RSR) relationship] is predicted to become increasingly curvilinear at more local spatial scales. This study tested whether the LSR–RSR relationship for coral species was linear or curvilinear at three local scales across the west-central Pacific Ocean, along a regional biodiversity gradient that includes the world’s most diverse coral assemblages. The local scales comprised transects 10^0–2 m apart, sites 10^3–4 m apart and islands 10^4–6 m apart. The LSR–RSR relationship was never significantly different from linear at any scale. When the Chao1 estimator was used to predict true RSR and LSR, all relationships were also strongly linear. We conclude that local assemblages are open to regional influences even when the local scale is very small relative to the regional scale, and even in extraordinarily rich regions.     

Insect species richness tracking plant species richness in a diverse flora: gall-insects in the Cape Floristic Region, South Africa

The Cape Floristic Region (CFR) is one of the most plant-species-rich regions in the world. It is also a warm temperate region and hypothetically should have high gall-insect species richness, making it interesting to investigate the relationship between the insects of the region and the rich flora. The relationship between gall-insect species richness (GSR) and plant richness was investigated for the Fynbos and for representatives of vegetation of the whole CFR. Samples (of up to 600 plants per transect for Fynbos) of woody shrubs were investigated for the presence of galls. The species richness of these insects was quantified, as well as plant species richness for each transect. GSR for Fynbos was compared to global figures for GSR. Fynbos harboured significantly more gall-insect species than other CFR vegetation types. GSR was positively correlated with CFR plant richness. GSR also closely tracked plant richness in Fynbos. GSR was not significantly influenced by other variables (elevation and aspect), suggesting that plant richness per se was an important factor in generating GSR. Fynbos GSR is comparable to other sclerophyllous regions of high GSR globally, corroborating that this vegetation type is conducive to gall-insect diversification. There is likely to be a high percentage of gall-insect endemism in the Fynbos, as might be expected from the high host fidelity of this insect group. Received: 22 September 1997 / Accepted: 16 February 1998