The importance of the natural sciences to conservation: (an American Society of Naturalists symposium paper)

The last century has seen enormous environmental degradation: many populations are in drastic decline, and their ecosystems have been vastly altered. There is an urgent need to understand the causes of the decline, how the species interact with other components of the environment, and how ecosystem integrity is determined. A brief review of marine systems emphasizes the importance of natural sciences to understanding the systems and finding solutions. These environmental crises coincide with the virtual banishment of natural sciences in academe, which eliminate the opportunity for both young scientists and the general public to learn the fundamentals that help us predict population levels and the responses by complex systems to environmental variation. Science and management demands that complex systems be simplified, but the art of appropriate simplification depends on a basic understanding of the important natural history. It seems unlikely that meaningful conservation and restoration can be accomplished unless we recover the tradition of supporting research in and the teaching of natural history. We must reinstate natural science courses in all our academic institutions to insure that students experience nature first-hand and are instructed in the fundamentals of the natural sciences.     

Seeing the trees in the forest: selective electroporation of adipocytes within adipose tissue

Electroporation has been recently adapted for the transfer of macromolecules into cells of tissues in vivo. Although mature adipocytes constitute <20% of cells residing in adipose tissue, we hypothesized that fat cells might be susceptible to selective electrotransfer of plasmid DNA owing to their large size relative to other cells in the tissue. Results demonstrate the feasibility of electroporating DNA into mature fat cells with >99% selectivity over other cells in the tissue. Further experiments used the "adiporation" technique to image the subcellular targeting of fluorescent bioreporter molecules to the nucleus, mitochondria, and lipid droplets of adipocytes within intact adipose tissue. Finally, we utilized fluorescent bioreporters to examine the effects of constitutive activation of the beta-adrenergic signaling pathway in adipocytes. These results demonstrate that overexpression of rat beta1-adrenergic receptors alters the cellular morphology of white adipocytes in a fashion that mimics the effects of systemic infusion of beta3-adrenergic receptor agonists. Hallmarks of the altered morphology include pronounced fragmentation of the single lipid droplet, repositioning of the nucleus, and induction of mitochondrial biogenesis. These results indicate that activation of beta-adrenergic signaling within adipocytes is sufficient to induce a phenotype that resembles typical brown adipocytes and suggest that in vivo electroporation will allow molecular dissection of the mechanisms involved.     

Reproductive biology of the dry forest tree Enterolobium cyclocarpum (guanacaste) in Costa Rica: a comparison between trees left in pastures and trees in continuous forest

We compared the rate of pollen deposition, the likelihood of fruit production, the number of seeds per fruit, the outcrossing rate, and the progeny vigor of the tropical dry forest tree Enterolobium cyclocarpum for individuals in pastures vs. individuals in continuous forest. We found that flowers from trees growing in continuous forests were more likely to have pollen deposited on their stigmas than flowers from trees in pastures (52.1 vs. 32.3%, respectively). We also found that trees from continuous forests were almost six times more likely to set fruits and produce more seeds per fruit than trees in pastures. Morever, progeny from trees in continuous forests were, on average, more vigorous than the progeny from trees in pastures, as indicated by 12 of 16 indicators of plant vigor. However, there was no significant difference in the multilocus estimate of the outcrossing rate between the two groups of trees (tm = 1.00 and 0.99 for trees from continuous forest and trees from pastures, respectively). But there are differences in the correlation of paternity between the progeny of the two groups, where the progeny from trees in pastures showed a lower correlation of paternity than progeny of trees from continuous forests (r(p) = 0.104 and r(p) = 0.189, respectively). We argue that the mechanisms that regulate progeny vigor are disrupted in trees from pastures. We discuss the implications of these findings for the conservation of E. cyclocarpum.     

Seeing the forest for the trees: partitioning ecological and phylogenetic components of Bergmann's rule in European Carnivora

Comparative methods have commonly been applied in macroecological research. However, few methods exist to map and analyze phylogenetic variation in geographical space. Here we develop a general analytical framework to partition the phylogenetic and ecological structures of macroecological patterns in geographic space. As an example, we apply the framework to evaluate interspecific patterns of body size geographic variation (Bergmann's rule) in European Carnivora. We model the components of variance attributable to ecological and phylogenetic effects, and to the shared influence of both factors. Spatial patterns in the ecological component are stronger than those in the original body size data. More importantly, the magnitude of intraspecific body size patterns (as measured by the correlation coefficient between body size and latitude) is significantly correlated with the ecological component across species, providing a unified interpretation for Bergmann's rule at multiple levels of biological hierarchy. This approach provides a better understanding of patterns in macroecological traits and allows improved understanding of their underlying ecological and evolutionary mechanisms.     

Neuroimaging: seeing the trees for the forest

New functional imaging studies demonstrate that it is possible to decode a sensory visual pattern, and even an internal perceptual state, by combining seemingly insignificant feature selective signal biases present in a large number of voxels.     

Population, quantitative and comparative genomics of adaptation in forest trees

High-throughput DNA sequencing and genotyping technologies have enabled a new generation of research in plant genetics where combined quantitative and population genetic approaches can be used to better understand the relationship between naturally occurring genotypic and phenotypic diversity. Forest trees are highly amenable to such studies because of their combined undomesticated and partially domesticated state. Forest geneticists are using association genetics to dissect complex adaptive traits and discover the underlying genes. In parallel, they are using resequencing of candidate genes and modern population genetics methods to discover genes under natural selection. This combined approach is identifying the most important genes that determine patterns of complex trait adaptation observed in many tree populations.