Black rat invasion of inland Sahel: insights from interviews and population genetics in south‐western Niger

Human population migrations, as well as long‐distance trade activities, have been responsible for the spread of many invasive organisms. The black rat, Rattus rattus, has colonized most of the world following ship‐mediated trade. Owing to its tight association with human infrastructures, this species has been able to survive in unfavourable environments, such as Sahelian Africa. In this work, we combined interview‐based and population genetic surveys to investigate the processes underlying the ongoing invasion of south‐western Niger by black rats, with special emphasis on the capital city, Niamey. Our trapping and interview data are quite congruent, and all together point towards a patchy, but rather widespread, current distribution of R. rattus. Genetic data strongly suggest that road network development for truck‐based commercial flow from/to international harbours located in neighbouring countries (Benin, Togo, and Nigeria) facilitates the passive dispersal of black rats over a long distance through unfavourable landscapes. Another potentially, more ancient, invasion route may be associated with boat transport along the Niger River. Human‐mediated dispersal thus probably allows the foundation of persisting populations within highly anthropized areas while population dynamics may be more unstable in remote areas and mostly depends on propagule pressure.     

Logging and Edaphic Factors in the Invasion of an Asian Woody Vine in a Mesic North American Forest

Factors contributing to an invasion of the Asian woody vine Celastrus orbiculatus in a mesic forested Massachusetts (USA) sanctuary were investigated. Planting germinated C. orbiculatus seeds in the field revealed that, although they tolerate a wide range of conditions, seedlings grow largest in moist circumneutral soil under high irradiance. A study of naturally occurring vines in a logged forest suggested that C. orbiculatus invaded two years after harvest, and invasion may have been triggered by logging disturbance. Vine stems were more abundant on former logging roads than in surrounding selectively logged areas. Former logging roads had a significantly higher soil pH than surrounding areas and, due to the direction of construction, a significantly more southerly aspect. Fourteen years after harvest, logging roads continued to provide this aggressive exotic with superior habitat for establishment and growth.     

Long-distance Dispersal of Invasive Grasses by Logging Vehicles in a Tropical Dry Forest

Predicting responses of vegetation to environmental factors in human-altered tropical ecosystems requires an understanding of the controls on plant population expansion across landscapes (i.e., long-distance dispersal) as well as of factors affecting recruitment at local scales (i.e., microsite conditions). We studied the roles of light availability, habitat type, soil disturbance, and seed dispersal in a selectively logged forest in lowland Bolivia where the exotic forage grass Urochloa (Panicum) maxima is abundant on roads and log landings but does not invade felling gaps or unlogged forest. Shade-house trials and seed addition experiments with U. maxima revealed that this C₄ grass thrives in high light but also grows in partial shade (10% full sun, but not 1% full sun), and that felling gaps, but not undisturbed forest, are suitable for grass establishment. To determine if seed dispersal by logging vehicles explains the discrepancy between actual and potential grass recruitment sites, we collected grass seeds that fell from trucks onto log landings located long distances (>500 m) from established grass populations. Trucks dispersed an estimated 1800 alien grass seeds per log landing during the early dry season; automobiles also transported seeds of grass (135 seeds/vehicle). The seeds collected (and relative abundances) were the exotics U. (Panicum) maxima (97%) and Urochloa (Brachiaria) brizantha (2%), and the pan-tropical weeds Sorghum halapense (1%) and Rottboellia cochinchinensis (0.2%). Grasses invade this forest where disturbance coincides with seed dispersal by motor vehicles, while dispersal limitation apparently prevents invasion of many sites otherwise suitable for grass recruitment (i.e., felling and natural gaps).     

Shrub Cover Influence on Seedling Growth and Survival Following Logging of a Tropical Forest

Logging in tropical forests may create large canopy openings. These gaps provide suitable conditions for some opportunistic shrubs and herbs to take advantage of the surge in resources and rapidly colonize disturbed sites. This dense plant cover may limit forest regeneration by interfering with tree seedling establishment, growth, and survival by altering the light and nutrients available to seedlings, modifying herbivore behavior, or a number of other factors. In Kibale National Park (Uganda), old logging sites are mainly covered by dense stands of Acanthus pubescens Engl., which appear to inhibit tree regeneration. We wanted to identify the ecological processes underlying this regeneration collapse. To do so, we designed a factorial experiment to evaluate the influences of herbivory and vegetation cover on the growth and survival of tree seedlings. We compared the survival and growth of transplanted tree seedlings in A. pubescens stands and logged forests, in the presence or absence of the understory vegetation layer (logged forest) or vegetation cover (A. pubescens), and with or without herbivory. We found no evidence to support the hypothesis that herbivory is significantly higher under dense A. pubescens cover. Seedling survival was not influenced by the environment. Seedling growth, however, was positively influenced by the removal of A. pubescens, suggesting that changes in resource availability associated with the presence of A. pubescens, may be important for regeneration. Our results suggest that sustained cutting of A. pubescens cover could foster the growth of established seedlings and could lead to tree regeneration and habitat restoration.     

The Stability of Invertebrate Communities in Bromeliad Phytotelmata in a Rain Forest Subject to Hurricanes

Communities of invertebrate animals in lower canopy and saxicolous tank bromeliads, originally studied in 1993–1997, were resampled along an elevational gradient in tabonuco, palo colorado, and dwarf or cloud forest in Puerto Rico in 2010. These Puerto Rican montane rain forests were impacted strongly by hurricanes in 1989 and 1998, so the surveys in the 1990s represented 4–8 yr of post‐hurricane recovery, whereas our recent survey represents 12 yr of post‐hurricane recovery. At most elevations, species diversity, both within individual bromeliads and at the forest scale, declined between the 1990s and 2010. This decline in diversity between decades is associated with reductions in bromeliad density as the canopy progressively closed during recovery from hurricane damage. The observed decline in alpha and gamma diversity appears to have involved the loss of rarer species, as might be expected from standard metapopulation theory. By contrast, the most common species were remarkably stable in abundance, composition, and frequency of occurrence over the two decades. In the lowermost tabonuco forest, two endemic bromeliad specialists, restricted to bromeliads for their entire life cycle, were not found on resampling. This study also demonstrates that, at least in Puerto Rico, sets of ten plants from each forest were sufficient to monitor bromeliad invertebrate populations and their diversity over time.     

Diversity and Coexistence of Ectoparasites in Small Rodents in a Tropical Dry Forest

To understand the mechanisms driving species diversity is central to community ecology. Here, we explored if habitat partitioning is associated with a species‐rich ectoparasite community in small rodents from a tropical dry forest in western Mexico. We trapped 199 mice in three 0.5 ha‐plots from eight small rodent species for every two months, from July 2011 to April 2012, and collected their ectoparasites. We identified 17 species of mites, two sucking lice species, two phoretic species, and one commensal species. The most abundant ectoparasite species was Steptolaelaps liomydis, representing 42 percent of all ectoparasites collected; seven ectoparasite species had < 10 individuals. Eighteen ectoparasite species (of 22 species) were collected from the most abundant rodent Liomys pictus. C‐score and the number of checkerboard species pairs were significantly higher against a random expectation. Ectoparasite species in L. pictus mice showed host microhabitat partitioning; Fahrenholzia ehrlichi and Fahrenholzia texana were found only in the anterior dorsal area, Ornithonysus sp. occurred along the dorsal part, Ixodes species were restricted to the ears, and Steptolaelaps liomydis was found throughout the body. We also identified ectoparasite communities with distinct species composition in two rodent species that use contrasting macrohabitats (L. pictus, strictly terrestrial; Peromyscus perfulvus, mostly arboreal). The remaining and low abundant rodent species showed a species‐poor ectoparasite community composition. We conclude that habitat partitioning at both macro and microhabitat scales appeared to characterize the species‐rich ectoparasite community. Conversely, most rodent host species with low abundances showed a species‐poor ectoparasite community.     

The Relative Contribution of Specialists and Generalists to Mistletoe Dispersal: Insights from a Neotropical Rain Forest

Mistletoes rely on birds for seed dispersal, but the presumed importance of mistletoe‐specialist frugivores has not been critically examined nor compared with generalist frugivores and opportunistic foragers. The contribution of these three groups was compared directly by quantifying bird visitation to fruiting mistletoe plants ( Oryctanthus occidentalis: Loranthaceae) at Barro Colorado Island, Panama, and by comparing these results with proportions calculated from other empirical studies of mistletoe visitation conducted elsewhere. After more than 100 h of timed watches, 23 bird species were recorded visiting eight heavily infected host trees ( Luehea seemannii: Tiliaceae). Eight of these species visited mistletoe, of which five (all tyrannids) consumed mistletoe fruit. Although two mistletoe specialist frugivores ( Tyrannulus elatus and Zimmerius vilissimus) removed most fruit (73%), more than a quarter was consumed by one generalist frugivore ( Mionectes oleagineus) and two opportunists ( Myiozetetes cayanensis and Myiozetetes similis). Post consumption behaviour varied: the specialists flew from mistletoe to mistletoe, the generalist rested in the subcanopy and understory, and the opportunists spent most time hawking insects and resting high in the canopy. Integrating these data with previous work, the dietary specialization, short gut passage rate and strict habitat preferences of mistletoe specialists suggests that their services relate primarily to intensification and contagious dispersal, while species with broader diets are more likely to visit uninfected trees and establish new infections. The presumed importance of mistletoe‐specialist frugivores was not supported and mistletoes are considered to be comparable to many other bird‐dispersed plants, relying on both specialist and generalist frugivores, while opportunists may be disproportionately important in long‐distance dispersal.     

Simulated Small Scale Disturbances Increase Decomposition Rates and Facilitates Invasive Species Encroachment in a High Elevation Tropical Andean Peatland

Tropical alpine peatlands are important carbon reservoirs and are a critical component of local hydrological cycles. In high elevation peatlands slow decomposition rates result from a nutrient‐poor substrate resistant to decay. The responses of páramo peatland ecosystems to increased nutrient additions and physical disturbance due to agricultural activities are unknown. Here, we conducted a two‐year fertilization and physical disturbance experiment in a Sphagnum—dominated peatland in the Central Andes of Colombia. We hypothesized that fertilization and physical disturbance will diminish the ability of the peat to store organic matter by increasing decomposition and that vascular plants will displace Sphagnum as the dominant plant group. We simulated cattle activity by adding manure as a fertilizer and physical disturbance as a proxy for cattle trampling. Species composition varied in proportion to the intensity of disturbance. Sphagnum cover was reduced under any disturbance treatment. Non‐native grasses usually found in cattle pastures invaded treatments with fertilizer additions or physical disturbance. Overall aboveground plant biomass doubled in fertilized treatments, suggesting that plant biomass production was nutrient limited. Decomposition rates tripled in disturbed treatments as compared to controls. This reduces the ability of the peatland to store organic matter. Andean peatlands are prized ecological assets; however, our results show that the El Morro páramo peatland experienced increased decomposition rates over short time periods after small‐scale disturbances. This created profound consequences for the ecological services offered by these peatlands.     

Impacts of rodent eradication on seed predation and plant community biomass on a tropical atoll

Invasive rodent eradications are frequently undertaken to curb island biodiversity loss. However, the breadth of rodents’ ecological impact, even after eradication, is not always fully recognized. For example, the most widespread invasive rodent, the black rat (Rattus rattus), while omnivorous, eats predominantly seeds and fruit. Yet, the effects of seed predation release after eradication on plant communities and ecological functions are not well understood, posing a gap for island restoration. We examined the role of seed predation release following black rat eradication in changes to tree composition and aboveground biomass across an islet network (Palmyra Atoll) in the Central Pacific. We conducted repeated surveys of seed, juvenile, and adult tree biomass and survival in permanent vegetation plots before and after the eradication of rats. We observed a 95% reduction in seed predation for an introduced, previously cultivated tree population (Cocos nucifera). Juvenile tree biomass of all species increased 14‐fold, with C. nucifera increasing the most, suggesting that eradication increased this tree's competitive advantage. Indeed, based on stage‐structured demographic models, rat eradication led to a 10% increase in C. nucifera population growth rate. The effect of invasive rodent seed predation varies considerably among the plant species in a community and can shift competitive dynamics, sometimes in favor of invasive plants. These bottom‐up effects should be considered in evaluating the costs and benefits of eradication. Documenting the variation in invasive rodent diet items, along with long‐term surveys, can help prioritize island eradications where restoration is most likely to be successful.     

Effects of Logging on the Diversity of Lianas in a Lowland Tropical Rain Forest in Hainan Island, South China

Lianas are an integral part of tropical forest ecosystems, which usually respond strongly to severe disturbances, such as logging. To compare the effect of different logging systems on the lianas diversity in tropical rain forest, we recorded all lianas and trees ≥1 cm dbh in two 40-year-old forest sites after clear cutting (CC) and selective cutting (SC) as well as in an old-growth (OG) lowland tropical rain forest on Hainan Island in south China. Results showed that OG contained fewer liana stems and lower species richness (stems: 261, richness: 42 in 1 ha) than CC (606, 52) and SC (727, 50). However, OG had the highest Fisher's α diversity index (17.3) and species richness per stem (0.184). Species composition and dbh class distribution of lianas varied significantly with different logging systems. The mean liana dbh in OG (22.1 cm) were higher than those in CC (7.0 cm) and SC (10.4 cm). Stem twining was the most frequent climbing mechanism represented in the forest, as shown by the greatest species richness, abundance, basal area, and host tree number with this mechanism. The percent of host tree stems ≥4 cm dbh hosting at least one liana individual in SC (39%) was higher than CC (23%) and OG (19.5%). Large host trees (dbh≥60 cm) were more likely to be infested by lianas in SC and OG. Our study demonstrated that logging disturbance could significantly change the composition and structure of liana communities in the lowland tropical rain forest of south China.
     

Movement Patterns of a Native and Non‐native Frugivore in Hawaii and Implications for Seed Dispersal

Avian frugivores historically played important roles as seed dispersers across the Hawaiian Islands, but presently, the ‘ōma‘o (Myadestes obscurus) is the only extant native frugivore in the wild on the Island of Hawaii. During recent decades, the introduced generalist Japanese White‐eye (Zosterops japonicus) has become the most common bird in Hawaii. The movements of avian frugivores largely dictate how far seeds get dispersed and into what kinds of microhabitats. This study compares the movement patterns and diet of the ‘ōma‘o to the Japanese White‐eye to understand how a native differs from a non‐native frugivore in the type and distances of seeds dispersed. Radiotelemetry was conducted on nine ‘ōma‘o and nine Japanese White‐eyes in a system of natural forest fragments (kīpuka) created by lava flows. Japanese White‐eyes disperse seeds approximately twice as far as ‘ōma‘o; during the time of gut passage, ‘ōma‘o move a mean distance of 98.1 m, and Japanese White‐eyes move 170.1–194.8 m. However, the ‘ōma‘o disperses the seeds of at least seven different native fruit species compared with two dispersed by Japanese White‐eyes. Japanese White‐eyes were found to disperse seeds smaller than 1.5 mm, whereas the ‘ōma‘o dispersed seeds up to 6 mm in diameter. Despite their ecological differences, both birds distribute certain seeds within and among kīpuka and likely facilitate primary succession of fruiting plants in the young lava matrix. However, this study suggests that if the ‘ōma‘o were extirpated, a smaller‐bodied generalist cannot entirely substitute for the ecological role played by the native frugivore.     

Contrasting Demographic Structure of Short‐ and Long‐lived Pioneer Tree Species on Amazonian Forest Edges

Although tropical forests have been rapidly converted into human‐modified landscapes, tree species response to forest edges remains poorly examined. In this study, we addressed four pioneer tree species to document demographic shifts experienced by this key ecological group and make inferences about pioneer response to forest edges. All individuals with dbh ≥ 1 cm of two short‐lived (Bellucia grossularioides and Cecropia sciadophylla) and two long‐lived species (Goupia glabra and Laetia procera) were sampled in 20 1‐ha forest edge plots and 20 1‐ha forest interior plots in Oiapoque and Manaus, Northeast and Central Amazon, respectively. As expected, pioneer stem density with dbh ≥ 1 cm increased by around 10–17‐fold along forest edges regardless of species, lifespan, and study site. Edge populations of long‐lived pioneers presented 84–94 percent of their individuals in sapling/subadult size classes, whereas edge populations of short‐lived pioneers showed 56–97 percent of their individuals in adult size classes. These demographic biases were associated with negative and positive net adult recruitment of long‐ and short‐lived pioneers, respectively. Our population‐level analyses support three general statements: (1) native pioneer tree species proliferate along forest edges (i.e., increased density), at least in terms of non‐reproductive individuals; (2) pioneer response to edge establishment is not homogeneous as species differ in terms of demographic structure and net adult recruitment; and (3) some pioneer species, particularly long‐lived ones, may experience population decline due to adult sensitivity to edge‐affected habitats.     

Spatial and Temporal Patterns of Frugivorous Hornbill Movements in Central Africa and their Implications for Rain Forest Conservation

Tropical forest conservation and restoration require an understanding of the movements and habitat preferences of important seed dispersers. With forests now being altered at an unprecedented rate, avian frugivores are becoming increasingly vital for forest regeneration. Seed movement, however, is highly dependent on the behavioral characteristics of their dispersers. Here, we examined the movements, habitat preferences, and range sizes of two African frugivores: the Black‐casqued (Ceratogymna atrata) and the White‐thighed (Bycanistes albotibialis) Hornbill, in the lowland rain forests of southern Cameroon. Using satellite transmitters, we tracked eight hornbills for 3 yr to characterize their movements and relate them to environmental landscape features. Hornbill movements differed significantly, with B. albotibialis ranging over larger areas (mean = 20,274 ha) than C. atrata (mean = 5604 ha), and females of both species covering over 15 times the area of males. Evidence suggests that movements are irruptive during particular periods, perhaps driven by low resource availability. In addition, hornbills often returned to the same localities within a year, although movements were not characterized as migratory. Both species displayed significant differences in habitat preference, with B. albotibialis utilizing disturbed habitat more frequently than C. atrata (t = ?22.04, P = 2.2 × 10^?16). Major roads were found to act as barriers for C. atrata, but not for B. albotibialis. The ability of both hornbill species to move large distances suggests hornbills will play a vital role in the maintenance and regeneration of rain forests in Central Africa as forest fragmentation increases and terrestrial vertebrates decline in numbers.     

Diameter Growth of Juvenile Trees after Gap Formation in a Bolivian Rain Forest: Responses are Strongly Species‐specific and Size‐dependent

We evaluated growth responses to gap formation for juvenile individuals of three canopy rain forest species: Peltogyne cf. heterophylla, Clarisia racemosa and Cedrelinga catenaeformis. Gaps were formed during selective logging operations 7 yr before sampling in a Bolivian rain forest. We collected wood samples for tree‐ring analyses at different distances to the stump (<10, 10–40 and >40 m) and from trees with different diameters (5–30 cm diameter at breast height [dbh]). Tree‐rings width was measured in at least two radii and converted to average diameter growth. Changes in 7‐yr median diameter growth before and after selective logging were analyzed. Diameter growth rates significantly increased by 0.7–0.8 mm/yr after gap formation for P. heterophylla and C. catenaeformis, but not for C. racemosa. We applied a multiple regression analysis to explain variation in growth responses of P. heterophylla and C. catenaeformis by distance to logging gap and tree size. For P. heterophylla we found that growth increase occurring close to logging gaps was strongest for large juvenile trees (20–25 cm dbh) and almost absent in small juveniles. For C. catenaeformis, variation in growth responses was not related to tree size or distance to gaps. Our results show that growth responses to gap formation strongly differ across species and tree sizes. This finding calls for caution in the interpretation of growth releases in tree‐ring series, as gap formation does not necessarily invoke growth responses and if such growth responses occur, their strength is species‐ and size specific.     

Pythons,parasites, and pests: anthropogenic impacts on Sarcocystis (Sarcocystidae) transmission in a multi‐host system

Parasites are essential components of ecosystems and can be instrumental in maintaining host diversity and populations; however, their role in trophic interactions has often been overlooked. Three apicomplexan parasite species of Sarcocystis (S. singaporensis, S. zamani, and S. villivillosi) use the reticulated python as their definitive hosts and several species within the Rattus genus as intermediate hosts, and they form a system useful for studying interactions between host–parasite and predator–prey relationships, as well as anthropogenic impacts on parasite transmission. Based on predictions from a 1998 survey, which detected an inverse relationship between urban development and Sarcocystis infection in Rattus, we tested the hypothesis that Sarcocystis transmission in Singapore will decrease over time due to anthropogenic activities. Despite a large proportion of the reticulated python diet consisting of Rattus species at all sizes of pythons, Sarcocystis infection rates decreased from 1998 to 2010. Pythons found in industrial areas had lower Sarcocystis infection rates, particularly in the western industrial area of Singapore Island. Average python size also decreased, with implications that we predict may disrupt host–parasite relationships. Anthropogenic activities such as habitat modification, fragmentation, and systematic removal and translocation of pythons have negative impacts on Sarcocystis transmission in Singapore, which in turn may augment pest rat populations. Trends observed may ultimately have negative impacts on human health and biodiversity in the region.     

Invasion genetics of American cherry fruit fly in Europe and signals of hybridization with the European cherry fruit fly

The American cherry fruit fly is an invasive pest species in Europe, of serious concern in tart cherry production as well as for the potential to hybridize with the European cherry fruit fly, Rhagoletis cerasi L. (Diptera: Tephritidae), which might induce new pest dynamics. In the first European reports, the question arose whether only the eastern American cherry fruit fly, Rhagoletis cingulata (Loew) (Diptera: Tephritidae), is present, or also the closely related western American cherry fruit fly, Rhagoletis indifferens Curran. In this study, we investigate the species status of European populations by comparing these with populations of both American species from their native ranges, the invasion dynamics in German (first report in 1993) and Hungarian (first report in 2006) populations, and we test for signals of hybridization with the European cherry fruit fly. Although mtDNA sequence genealogy could not separate the two American species, cross‐species amplification of 14 microsatellite loci separated them with high probabilities (0.99–1.0) and provided evidence for R. cingulata in Europe. German and Hungarian R. cingulata populations differed significantly in microsatellite allele frequencies, mtDNA haplotype and wing pattern distributions, and both were genetically depauperate relative to North American populations. The diversity suggests independent founding events in Germany and Hungary. Within each country, R. cingulata displayed little or no structure in any trait, which agrees with rapid local range expansions. In cross‐species amplifications, signals of hybridization between R. cerasi and R. cingulata were found in 2% of R. cingulata individuals and in 3% of R. cerasi. All putative hybrids had R. cerasi mtDNA indicating that the original between‐species mating involved R. cerasi females and R. cingulata males.     

Population status and habitat preference of Soemmerring’s gazelle in Alledeghi Wildlife Reserve,Eastern Ethiopia

This study was undertaken to determine the current population size, structure and habitat preference of Soemmerring's gazelle [Nanger soemmerringii (Cretzschmar 1828)] in the Alledeghi Wildlife Reserve, NE Ethiopia. Animals were counted, both during dry and wet seasons, along 12 line transects each in three habitat types (grassland, tree‐scattered grassland and bushland) in 2015/16. Habitat type had nonsignificant effect on mean population density of Soemmerring's gazelle, but wet season mean density was significantly higher than dry season mean density. Estimated weighted mean (±95% CI) population density of the species in the reserve was 1.90 (±0.17) and 5.99 (±0.370) individuals/km² during the dry and wet seasons, respectively. Total population size of the species in the Alledeghi Wildlife Reserve was estimated at 826 ± 77 and 2,562 ± 158 individuals during the dry and wet seasons, respectively. Over half of the total population of Soemmerring's gazelle was represented by adult females during both seasons. Seasonal habitat preference of Soemmerring's gazelle was statistically significant, with greater preference for grassland habitat during wet season and for bushland habitat during dry season. In conclusion, this study has provided valuable data that will be used as a baseline for future population monitoring.