Changes in phytoperiphyton community during seasonal succession: influence of plankton sedimentation and grazing by phytophages--Chironomid larvae

The investigation of seasonal changes in spatial structure of phytoperiphyton during succession was conducted at the lower reaches of Akulovsky water channel from April to August 2000. At the beginning of succession from April to June dominant forms were chain-forming diatoms and filamentous green algae, sedimented from plankton. Later, at the middle of June under increasing pressure of herbivorous, they were replaced by stretched unicellular diatoms and colonial cyanobacteria. In late June-August, when herbivorous predation was the most intensive, the relative abundance of typical periphytonic forms decreased while that of settled planktonic forms increased. The effect of planktonic algae sedimentation on periphyton composition was evaluated as similarity between phytoperiphyton and phytoplankton communities measured with Chekanovski--Sorensen index. The value of this index tends to decrease with the development of periphyton while showing some relation to intensity of herbivorous pressure. Minimal values of Chekanovski--Sorensen index were under moderate herbivorous density, whereas maximal values were observed in periods of extremely high or low herbivorous density.     

Electron microscopic study of succession in the periphyton community of lake Washington

Microbial succession has been observed on electron microscope grids immersed in lake water for 1, 3, 6, and 10 days. As predicted by ecological theory, the biomass, numbers, and diversity of attached microorganisms increased as succession proceeded. The diversity index of Shannon showed a marked increase from 3.1 at day 1 to 4.2 at day 3. It continued to rise at day 6 and attained the maximum value calculated on day 10 of 4.8. Bacteria were the major pioneer colonizers in this mesotrophic community. Based on these results and the results of other microbiologists who have found bacteria to be the dominant component during the pioneer stage of succession in periphyton communities of varying trophic status, we suggest that microbial heterotrophs may commonly, and perhaps always, be the major component of the early pioneer community of autogenic successions.     

Interannual variability in the seasonal plankton succession of a shallow, warm-water lake

Common seasonal plankton succession patterns in temperate lakes are well understood, and were described in the popular PEG-model. Seasonal plankton succession in warm-water lakes, however, is not as well known. Recent theory suggests that some lake systems are characteristic of having alternate system-states, where one of the system-states is characterized by dominance of cyanobacteria, and transition between system-states can be abrupt and undeterminable. Lake Somerville, a shallow, well-mixed, warm-water reservoir located in eastern TX, U.S.A., experiences occasional periods of cyanobacteria dominance. To increase our understanding of seasonal plankton dynamics in warm-water systems, we analyzed 14-years of plankton data spanning a 22-year period. During this period, succession dynamics characteristic of those described by the PEG-model were observed, as well as succession dynamics expected during periods of cyanobacteria dominance, i.e., greater accumulated phytoplankton biovolume, low secondary productivity, and low light penetration. In addition to the PEG-model and cyanobacteria type system-states, other states of the system that were intermediate between these were observed. Therefore, we conclude the lake does not behave according to the alternate system-states model. The change from year to year in early-year cyanobacteria dominance was abrupt and non-monotonic during this period. In addition, the early year performance of cyanobacteria appeared to influence the plankton succession trajectory for the remainder of the season. While the magnitude of lake-flushing early in the year accounted for ～37% of variability in cyanobacteria prevalence, many of the traditional factors impacting cyanobacteria dominance appeared insignificant.     

Phylogenetic community structure during succession: Evidence from three Neotropical forest sites

The phylogenetic structure of communities can reveal forces shaping community assembly, but the vast majority of work on phylogenetic community structure has been conducted in mature ecosystems. Here, we present an analysis of the phylogenetic structure of three Neotropical rain forest communities undergoing succession. In each site, the net relatedness of the community is initially high and consistently declines during succession. This pattern is evident both when comparing plots of different age classes and when comparing stem size classes within each plot: the oldest plots and the youngest stem cohorts, representing the most advanced stages of succession, have the lowest relatedness. Our results suggest that succession leaves a distinct signature in the phylogenetic structure of communities, which may reflect an increasing role of biotic interactions in community assembly during succession. We discuss theoretical explanations for the decline in community phylogenetic relatedness during succession, and suggest directions for future study.     

Incisor size and community structure in rodents: Two tests of the role of competition

We used two different approaches to test for the effect of interspecific competition on community-wide patterns in the size of the upper incisor in six rodent communities. One tests for constancy of size ratios between adjacent species (Barton and David's test), and the other tests for minimum mean size overlap between species pairs (randomization test). The results of the two tests were more congruent for the radius of the upper incisor than for its diameter. Although a number of tests gave significant results, they led to a consistent rejection of the null hypothesis of a randomly generated pattern only in two communities from an African rainforest. Many factors are likely to disturb community structure, among which we identify recent species introductions and the presence of rare species. Our results also show that Hutchinson's rule of a limiting size similarity does not hold; the mean size ratio between adjacent species was correlated with the overall size range and the number of species in a community.     

The revised edition of a computerized plankton counter for plankton,periphyton and sediment diatom analyses

A revised computer counting program is presented with faster processing and more efficient features to enhance counting precision. The program is now capable of counting epilithic communities and sediment samples for diatom analysis. This version (2.3) is available for APPLE, IBM, TANDY-RADIO SHACK, and HYPERION systems using standard Basic commands. New improvements include, density and biovolume calculations, a Chi square transect test for randomness, D'Agostino's test for a normal taxa distribution and a three file output with raw and processed data.     

The seasonal dynamics of the succession rate in a near-shore macrophytic community

This paper discusses a method for computing an index that reflects the rate of changes in the community species structure. This index is illustrated based on the example of the macrophyte community of Vityaz Bay in the Sea of Japan. The mean annual succession rate of this community was estimated as 0.030 day^?1.     

Change in community phylogenetic structure during tropical forest succession: evidence from New Guinea

Ecologists have recently interpreted patterns of phylogenetic distance among coexisting species as indicative of processes affecting community assembly during forest succession. We investigated plant community phylogenetic structure along a successional gradient in New Guinean lowland rain forest. We surveyed all trees with diameter at breast height ≥ 5 cm in nineteen 0.25 ha plots representing younger secondary, older secondary, and primary forest. We estimated plant community phylogeny from rbcL gene sequences to quantify change in phylogenetic structure during succession. Mean phylogenetic distance among co‐occurring trees increased with total basal area per plot, a proxy for forest age. Significant phylogenetic clustering was detected in secondary forest whereas primary forest was significantly over‐dispersed relative to null expectations. We examined the sensitivity of these patterns to various methods of branch length estimation and phylogenetic uncertainty. Power to detect community phylogenetic patterns when equal branch lengths were assumed was weak in comparison to direct molecular and time‐calibrated measures of divergence. Inferred change during forest succession was also robust to phylogenetic uncertainty so long as temporal information was incorporated in estimates of divergence. The observed patterns are consistent with processes of environmental filtering during tropical forest succession giving way to other processes in primary forests including density‐dependence.     

有机磷培养下水体浮游植物竞争与群落结构演替

磷是浮游植物生长的必要元素,也是调控水体富营养化的重要因子之一。在无机磷缺乏的水域,能够有效利用有机磷的藻类有可能成为浮游植物群落的优势种。为了研究有机磷对浮游植物群落结构演替的影响,分别从3个水库采集表层水样,西陂水库(硅藻70.3%,甲藻19.1%,绿藻9.3%)、山美水库(硅藻31.3%,甲藻59.2%,绿藻3.5%)、三十六脚湖(硅藻43.1%,甲藻50.5%,绿藻5.0%),选用有机磷单磷酸腺苷(Adenosine monophosphate,AMP)作为磷源进行实验室模拟实验,并与无机磷(NaH_2PO_4·2H_2O)作为磷源实验组做同步对比,探讨有机磷源条件下浮游植物竞争及群落结构演替规律。结果显示:AMP培养20 d后,西陂水库、山美水库和三十六脚湖的浮游植物生物量分别增加了6.5倍,2.1倍和1.9倍,浮游植物群落结构都演替为以甲藻门和绿藻门为优势藻,所占比例分别为81.8%和16.7%、55.2%和33.5%、73.2%和24.3%,其中西陂水库甲藻门拟多甲藻对有机磷AMP的利用能力强,其所占比例达到81.8%。表明有机磷AMP能有效地促进甲藻门拟多甲藻属的增殖,进而改变水体浮游植物群落结构。     

The effect of sedimentation and microbial nitrogen regeneration in a plankton community: a simulation investigation

A computer simulation model was developed to investigate nitrogenfluxes associated with microbial interactions in plankton communities.A short time scale was used, appropriate to the build-up anddecline of phytoplankton blooms in temperate shelf waters aftera mixing or upwelling event. The model depicts a continuum ofevents, many of which have been observed in coastal, upwellingand oceanic systems, including two phytoplankton peaks correspondingto ‘new production’ and ‘regenerated production’.It predicts that nitrogen loss through sedimentation of phytoplanktonand faeces may result in a smaller bloom with a delayed onsetand prolonged duration. Microbial regeneration of nitrogen wasfound to be important in sustaining the middle stages of a phytoplanktonbloom, whereas micro- and meso-zooplankton regeneration occurredtowards the end of the bloom.     

Changes in the community structure of ammonia-oxidizing bacteria during secondary succession of calcareous grasslands

The community structure of β-subclass Proteobacteria ammonia-oxidizing bacteria was determined in semi-natural chalk grassland soils at different stages of secondary succession. Both culture-mediated (most probable number; MPN) and direct nucleic acid-based approaches targeting genes encoding 16S rRNA and the AmoA subunit of ammonia monooxygenase were used. Similar shifts were detected in the composition of the ammonia oxidizer communities by both culture-dependent and independent approaches. A predominance of Nitrosospira sequence cluster 3 in early successional fields was replaced by Nitrosospira sequence cluster 4 in late successional fields. The rate of this shift differed between the two areas examined. This shift occurred in a background of relative stability in the dominant bacterial populations in the soil, as determined by domain-level polymerase chain reaction–denaturing gradient gel electrophoresis (PCR–DGGE). Molecular analysis of enrichment cultures obtained using different ammonia concentrations revealed biases towards Nitrosospira sequence cluster 3 or Nitrosospira sequence cluster 4 under high- or low-ammonia conditions respectively. High-ammonia MPNs suggested a decease in ammonia oxidizer numbers with succession, but low-ammonia MPNs and competitive PCR targeting amoA failed to support such a trend. Ammonia turnover rate, not specific changes in plant diversity and species composition, is implicated as the major determinant of ammonia oxidizer community structure in successional chalk grassland soils.     

Impacts of two biomanipulation fishes stocked in a large pen on the plankton abundance and water quality during a period of phytoplankton seasonal succession

Silver and bighead carp were stocked in a large pen to control the nuisance cyanobacterial blooms in Meiliang Bay of Lake Taihu. Plankton abundance and water quality were investigated about once a week from 9 May to 7 July in 2005. Biomass of both total crustacean zooplankton and cladocerans was significantly suppressed by the predation of pen-cultured fishes. There was a significant negative correlation between the N:P weight ratio and phytoplankton biomass. The size-selective predation by the two carps had no effect on the biomass of green alga Ulothrix sp. It may be attributed to the low fish stocking density (less than 40 g m⁻³) before June. When Microcystis dominated in the water of fish pen, the pen-cultured carps effectively suppressed the biomass of Microcystis, as indicated by the significant decline of chlorophyll a in the >38 μm fractions of the fish pen. Based on the results of our experiment and previous other studies, we conclude that silver and bighead carp are two efficient biomanipulation tools to control cyanobacterial (Microcystis) blooms in the tropical/subtropical eutrophic waters. Moreover, we should maintain an enough stocking density for an effective control of phytoplankton biomass.     

Microbial community succession and bacterial diversity in soils during 77,000 years of ecosystem development

The origins of the biological complexity and the factors that regulate the development of community composition, diversity and richness in soil remain largely unknown. To gain a better understanding of how bacterial communities change during soil ecosystem development, their composition and diversity in soils that developed over c. 77 000 years of intermittent aeolian deposition were studied. 16S rRNA gene clone libraries and fatty acid methyl ester (FAME) analyses were used to assess the diversity and composition of the communities. The bacterial community composition changed with soil age, and the overall diversity, richness and evenness of the communities increased as the soil habitat matured. When analysed using a multivariate Bray-Curtis ordination technique, the distribution of ribotypes showed an orderly pattern of bacterial community development that was clearly associated with soil and ecosystem development. Similarly, changes in the composition of the FAMEs across the chronosequence were associated with biomarkers for fungi, actinomycetes and Gram-positive bacteria. The development of the soil ecosystem promoted the development of distinctive microbial communities that were reminiscent of successional processes often evoked to describe change during the development of plant communities in terrestrial ecosystems.     

Competition among the pioneers in a seasonal soft-bottom benthic succession: field experiments and analysis of the Gilpin-Ayala competition model

Summary Controlled experiments, designed to assess the effects of pioneers on succession on an intertidal sandflat, provided evidence for interspecific competition between juvenile Hobsonia florida (Polychaeta, Ampharetidae) and oligochaetes. The field data were fitted to both the linear Volterra and non-linear Gilpin-Ayala competition equations. With its greater number of parameters, the Gilpin-Ayala model must provide a better fit to observed population abundances. The Gilpin-Ayala model is flawed as an explanation of the population trajectories of the H. florida and oligochaetes, because its non-linearity parameter affects only intraspecific competion. With either model our field data demonstrate a solution to Hutchinson's paradox. With competition coefficients near unity and similar carrying capacities, the predicted population trajectories are heavily dependent on initial conditions. The predicted times to competitive exclusion are long and can easily exceed the typical period of environmental constancy. Our study offers evidence for Neill's competitive bottleneck: competition acts primarily on the developmental stages of one of a pair of competing species. The permanent meiofauna may act as a competitive bottleneck for the population growth of benthic macrofauna. The mechanism of this competitive interaction probably involves exploitative interspecific competition for benthic diatoms.     

Comparative study of periphyton community structure in long and short-hydroperiod Everglades marshes

The Florida Everglades is a mosaic of short and long-hydroperiod marshes that differ in the depth, duration, and timing of inundation. Algae are important primary producers in widespread Everglades’ periphyton mats, but relationships of algal production and community structure to hydrologic variability are poorly understood. We quantified differences in algal biomass and community structure between periphyton mats in 5 short and 6 long-hydroperiod marshes in Everglades National Park (ENP) in October 2000. We related differences to water depth and total phosphorus (TP) concentration in the water, periphyton and soils. Long and short-hydroperiod marshes differed in water depth (73 cm vs. 13 cm), periphyton TP concentrations (172μg g⁻¹ vs. 107 μg g⁻¹, respectively) and soil TP (284 μg g⁻¹ vs. 145 μg g⁻¹). Periphyton was abundant in both marshes, with short-hydroperiod sites having greater biomass than long-hydroperiod sites (2936 vs. 575 grams ash-free dry mass m⁻²). A total of 156 algal taxa were identified and separated into diatom (68 species from 21 genera) and “soft algae” (88 non-diatom species from 47 genera) categories for further analyses. Although diatom total abundance was greater in long-hydroperiod mats, diatom species richness was significantly greater in short- hydroperiod periphyton mats (62 vs. 47 diatom taxa). Soft algal species richness was greater in long-hydroperiod sites (81 vs. 67 soft algae taxa). Relative abundances of individual taxa were significantly different among the two site types, with soft algal distributions being driven by water depth, and diatom distributions by water depth and TP concentration in the water and periphyton. Periphyton communities differ between short and long-hydroperiod marshes, but because they share many taxa, alterations in hydroperiod could rapidly promote the alternate community. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Secondary succession and breeding bird community structure: Patterns of resource utilization

Summary Structure of breeding bird communities was compared among four habitat types representative of stages present in most old-field successions in the eastern deciduous forest formation of North America. The successional catagories, defined by vegetational structure, were designated herbaceous (type A habitats) herb, shrub and sapling (type B), young forest (type C), and older forest (type D). Density of breeding birds was lowest in A habitats, rose sharply in B habitats and reached a maximum in D habitats. Species richness and number of feeding guild showed similar patterns. Mean number of species per guilds was highest in D habitats. Generalist feeding guilds were predominant in type A and B habitats, primarily due to the importance of the graminivore-insectivore guild. Specialist guilds increased in importance with succession due to addition of several insectivorous guilds in later successional stages. Patterns of occurrence of individual feeding guilds are analyzed and discussed with respect to changes in vegetational structure. Variance in community structure was generally highest in A habitats and lowest in D habitats; this is discussed in relation to the evolution of saturated, coadapted communities.     

群落结构和叶面积指数在具茨山植被次生演替中的变化

采取3S(GIS,RS和GPS)技术和野外作业相结合的方法,研究了河南省具茨山人为干扰后植被次生演替过程。在此基础上,从宏观和微观尺度对不同演替阶段典型群落的结构变化和植被叶面积指数(LAI)动态进行分析。结果表明:乔木阶段的植被LAI均值为4.1～5.5;灌木阶段为3.0～3.7;草本阶段为1.0～1.5。部分灌木林在生长季的LAI和盖度高于乔木林。随着演替进行,群落结构也发生很大变化,乔木种类和数量逐步上升。植被系统的复杂度和稳定性不断增强,其发挥的生态功能和生态服务价值随之提高。     

Correspondence between community structure and function during succession in phenol- and phenol-plus-trichloroethene-fed sequencing batch reactors

The effects of more than 2 years of trichloroethene (TCE) application on community succession and function were studied in two aerobic sequencing batch reactors. One reactor was fed phenol, and the second reactor was fed both phenol and TCE in sequence twice per day. After initiation of TCE loading in the second reactor, the TCE transformation rates initially decreased, but they stabilized with an average second-order rate coefficient of 0.044 liter mg(-1) day(-1) for 2 years. In contrast, the phenol-fed reactor showed higher and unstable TCE transformation rates, with an average rate coefficient of 0.093 liter mg(-1) day(-1). Community analysis by terminal restriction fragment length polymorphism (T-RFLP) analysis of the 16S rRNA genes showed that the phenol-plus-TCE-fed reactor had marked changes in community structure during the first 100 days and remained relatively stable afterwards, corresponding to the period of stable function. In contrast, the community structure of the phenol-fed reactor changed periodically, and the changes coincided with the periodicity observed in the TCE transformation rates. Correspondence analysis of each reactor community showed that different community structures corresponded with function (TCE degradation rate). Furthermore, the phenol hydroxylase genotypes, as determined by restriction fragment length polymorphism analysis, corresponded to community structure patterns identified by T-RFLP analysis and to periods when the TCE transformation rates were high. Long-term TCE stress appeared to select for a different and stable community structure, with lower but stable TCE degradation rates. In contrast, the community under no stress exhibited a dynamic structure and dynamic function.     

Effects of solar ultraviolet radiation on the periphyton community in lotic systems: comparison of attached algae and bacteria during their development

The effects of solar ultraviolet radiation (UVR) on the development of a periphyton community were studied in an outdoor artificial stream apparatus. Algal biomass, species composition, and bacterial cell density were measured under full sunlight and non-UVR (photosynthetically active radiation [PAR]-only) conditions. Attachment of algae was detected on days 6–9. Although the chlorophyll-a concentration under non-UVR conditions was 2–4 times that under full sunlight (PAR + UVR) throughout the experiment, neither net algal growth rate nor species composition differed significantly between the two light conditions. The relative carotenoid pigment contents of attached algae in the PAR + UVR condition were 1.1–1.3 times those in the non-UVR condition. Rates of increase of bacterial cell densities under the PAR + UVR condition were depressed by solar UVR for the first few days, although there were no apparent differences in the rates of increase between the light conditions later in the experiment. The small effect of UVR on the development of this periphyton community may be attributable to low UV flux at this study site and to the experimental conditions under which the algae were kept: a high physiological state with high nutrient conditions. Attached bacteria and algae that colonize substrata first are likely to be sensitive to solar UVR, and the negative effects of UVR are mitigated by the development of a periphyton community.     

The role of innate immune responses in the outcome of interspecies competition for colonization of mucosal surfaces

Since mucosal surfaces may be simultaneously colonized by multiple species, the success of an organism may be determined by its ability to compete with co-inhabitants of its niche. To explore the contribution of host factors to polymicrobial competition, a murine model was used to study the initiation of colonization by Haemophilus influenzae and Streptococcus pneumoniae. Both bacterial species, which occupy a similar microenvironment within the nasopharynx, persisted during colonization when given individually. Co-colonization, however, resulted in rapid clearance of S. pneumoniae from the upper respiratory tract, associated with increased recruitment of neutrophils into paranasal spaces. Systemic depletion of either neutrophil-like cells or complement was sufficient to eliminate this competitive effect, indicating that clearance was likely due to enhanced opsonophagocytic killing. The hypothesis that modulation of opsonophagocytic activity was responsible for host-mediated competition was tested using in vitro killing assays with elicited neutrophil-like cells. Components of H. influenzae (but not S. pneumoniae) stimulated complement-dependent phagocytic killing of S. pneumoniae. Thus, the recruitment and activation of neutrophils through selective microbial pattern recognition may underlie the H. influenzae-induced clearance of S. pneumoniae. This study demonstrates how innate immune responses may mediate competitive interactions between species and dictate the composition of the colonizing flora.