Exoskeleton anomalies in taiga tick males from populations of the Asian part of Russia

Variation of the exoskeleton is described for 2630 males of the taiga tick Ixodes persulcatus Schulze, 1930 collected by flagging from vegetation in the Far Eastern, Siberian, and Ural Federal Districts of Russia. Two types of conscutum anomalies were found to be prevalent in all the samples. Exoskeleton anomalies were less frequently recorded in the Far Eastern Federal District than in the Siberian and Ural Federal Districts: 6.5 ± 1.05, 29.7 ± 1.03, and 25.8 ± 3.93%, respectively. The observed phenotypic variation seems to be unrelated to anthropogenic impact. In the meridional direction, the taiga tick samples with different frequencies of exoskeleton anomalies correspond to two races of the species.     

Distribution of CCR5-delta 32 gene deletion across the Russian part of Eurasia

32-bp inactivating deletion in the β-chemokine receptor 5 (CCR5) gene, common in Nothern European populations, is associated with reduced HIV-1 transmission risk and delayed disease progression. We have studied the deletion distribution in many populations in Eurasia by polymerase chain reaction analysis of 531 DNA samples representing West and East Siberian, Central Asian, and Far Eastern parts of Russia. An unusually high frequency (11.1%) of the deleted variant in natives of West Siberia, of Finno-Ugrian descent, was observed. Furthermore, the deletion was infrequent in indigenous populations of Central Asia, East Siberia, the Russian Far East, and Canada. We conclude that the Δccr5 distribution is limited primarily to Europeans and related western Siberian Finno-Ugrian populations, with a sharp negative gradient toward the east along the territory of Russian Asia. Received: 22 December 1997 / Accepted: 24 March 1998     

Genetic variation and differentiation in striped field mouse Apodemus agrarius inferred from RAPD-PCR analysis

Genetic variation and differentiation of the trans-Palearctic species Apodemus agrarius (striped field mouse), whose range consists of two large isolates-European-Siberian and Far Eastern-Chinese, were examined using RAPD-PCR analysis. The material from the both parts of the range was examined (41 individual of A. agrarius from 18 localities of Russia, Ukraine, Moldova, and Kazakhstan); the Far-Eastern part was represented by samples from the Amur region, Khabarovsk krai, and Primorye (Russia). Differences in frequencies of polymorphic RAPD loci were found between the European-Siberian and the Far Eastern population groups of striped field mouse. No "fixed" differences between them in RAPD spectra were found, and none of the used statistical methods permitted to distinguish with absolute certainty animals from the two range parts. Thus, genetic isolation of the European-Siberian and the Far Eastern population groups of A. agrarius is not strict. These results support the hypothesis on recent dispersal of striped field mouse from East to West Palearctics (during the Holocene climatic optimum, 7000 to 4500 years ago) and subsequent disjunction of the species range (not earlier than 4000-4500 years ago). The Far Eastern population group is more polymorphic than the European-Siberian one, while genetic heterogeneity is more uniformly distributed within it. This is probably explained by both historical events that happened during the species dispersal in the past, and different environmental conditions for the species in different parts of its range. The Far Eastern population group inhabits the area close to the distribution center of A. agrarius. It is likely that this group preserved genetic variation of the formerly integral ancestral form, while some amount of genetic polymorphism could be lost during the species colonization of the Siberian and European areas. To date, the settlement density and population number in general are higher than within the European-Siberian isolate, which seems to account for closer interpopulation associations, intense genetic exchange, and "smoothing" of polymorphism within the Far Eastern population group of A. agrarius.     

Genetic variation and differentiation in striped field mouse <Emphasis Type="Italic">Apodemus agrarius</Emphasis> inferred from RAPD-PCR analysis

Genetic variation and differentiation of the trans-Palearctic species Apodemus agrarius (striped field mouse), whose range consists of two large isolates—European-Siberian and Far Eastern-Chinese, were examined using RAPD-PCR analysis. The material from the both parts of the range was examined (41 individual of A. agrarius from 18 localities of Russia, Ukraine, Moldova, and Kazakhstan); the Far Eastern-Chinese part was represented by samples from the Amur region, Khabarovsk krai, and Primorye (Russia). Differences in frequencies of polymorphic RAPD loci were found between the European-Siberian and the Far Eastern population groups of striped field mouse. No “fixed” differences between them in RAPD spectra were found, and none of the used statistical methods permitted to distinguish with absolute certainty animals from the two range parts. Thus, genetic isolation of the European-Siberian and the Far Eastern population groups of A. agrarius is not strict. These results support the hypothesis on recent dispersal of striped field mouse from East to West Palearctics (during the Holocene climatic optimum, 7000 to 4500 years ago) and subsequent disjunction of the species range (not earlier than 4000–4500 years ago). The Far Eastern population group is more polymorphic than the European-Siberian one, while genetic heterogeneity is more uniformly distributed within it. This is probably explained by both historical events that happened during the species dispersal in the past, and different environmental conditions for the species in different parts of its range. The Far Eastern population group inhabits the area close to the distribution center of A. agrarius. It is likely that this group preserved genetic variation of the formerly integral ancestral form, while some amount of genetic polymorphism could be lost during the species colonization of the Siberian and European areas. To date, the settlement density and population number in general are higher than within the European-Siberian isolate, which seems to account for closer interpopulation associations, intense genetic exchange, and “smoothing” of polymorphism within the Far Eastern population group of A. agrarius.     

On the Gene Pool of Roe Deer (<Emphasis Type="Italic">Capreolus</Emphasis>) of Eastern Europe: Analysis of the Cyt <Emphasis Type="Italic">b</Emphasis> Gene Sequence Variability

Sequence analysis of the mtDNA cytochrome b gene (974 bp) was performed using 139 roe deer specimens from different regions of the European part of Russia and Ukraine. The data obtained showed that, at present, both European and Siberian roe deer inhabit this part of the range with predominance of the later: about 60% of individuals carry various Siberian haplotypes, most of which are similar to those in the populations of Capreolus pygargus from the Urals, Siberia, and the Far East. A great variety of mtDNA haplotypes of Siberian roe deer in Eastern Europe is undoubtedly caused by the heterogeneity of founder individuals (immigrants) that were imported from different parts of Asia. Some problems of coexistence of closely related species are discussed.     

The genotyping of the West Nile virus in birds in the far eastern region of Russia in 2002-2004

Samples from 20 species of trapped and dead birds were collected in the Far Eastern Region in 2002-2004 and were analyzed by the anti-WNV MAb-modified immunoenzyme assay for antigen detection and RT-PCR for viral RNA detection. Five positive samples from cinereous vultures (Aegypius monachus) and two positive samples from cattle egret (Bubulcus ibis) were found in both tests. The sequencing of the 322 bp fragments of protein E gene showed 99-99.67% homology with the strain WNV/LEIV-VlgOO-27924 of the WNV isolated in Volgograd, Russia, 2000. Additionally, five positive samples from birds (Pica pica, Corvus macrorhynchos, Larus crossirostris, Parus minor, Emberiza spodocephala) collected in autumn 2004 were found during screening with anti-WNV MAb-modified ELISA. These results confirm that the WNV is circulating in the Far Eastern Region of Russia and outbreaks of WN fever in humans may be possible. This demonstrates that the genotype 1a of the West Nile virus could spread in the southern regions of the Far East by migrating birds and introduction of the WNV into other southern regions of the Asian part of Russia are probably.     

Invasive alien plants of Russia: insights from regional inventories

Recent research on plant invasions indicates that some parts of the world are understudied with temperate Asia among them. To contribute towards closing this gap, we provide a standardized list of invasive alien plant species with their distributions in 45 Russian regions, and relate the variation in their richness to climate, socioeconomic parameters and human influence. In total, we report 354 invasive alien species. There are, on average, 27 ± 17 (mean ± SD) invasive plants per region, and the invasive species richness varies from zero in Karelia to 71 in Kaluga. In the European part of Russia, there are 277 invasive species in total, in Siberia 70, and in the Far East 79. The most widespread invaders are, in terms of the number of regions from which they are reported, Acer negundo, Echinocystis lobata (recorded in 34 regions), Erigeron canadensis and Elodea canadensis (recorded in 30 regions). Most invasive species in Russia originate from other parts of temperate Asia and Europe. There were significant differences in the representation of life forms between the European, Siberian and Far East biogeographical regions, with perennials being over-represented in the Far East, and shrubs in the European part of Russia. The richness of invasive species can be explained by climatic factors, human population density and the percentage of urban population in a region. This publication and the associated dataset is the first comprehensive treatment of the invasive flora of Russia using standardized criteria and covering 83% of the territory of this country.     

俄罗斯东部城镇化与生态环境协调发展的时空演变特征

以俄罗斯东部地区为对象,结合PES和PSR模型分别构建其城镇化和生态环境的评价指标体系,结合熵值赋权、变异系数赋权的综合确权法测算城镇化和生态环境的发展水平,利用耦合协调度模型探讨二者协调发展程度,划分其阶段类型。研究表明：2005-2018年,（1）俄东部城镇化发展水平呈上升趋势,经济城镇化的贡献份额最大;生态环境发展水平呈小幅下降态势,生态环境压力的影响作用最大;二者的耦合协调度呈增长趋势,但整体处于基本不协调阶段,其内部由城镇化滞后转变为系统均衡发展。（2）西伯利亚联邦区的城镇化发展水平高于远东联邦区,二联邦区生态环境发展水平差距较小,西伯利亚区协调发展程度略强于远东区;西伯利亚区内部由城镇化滞后→系统均衡发展,远东区内部始终为城镇化滞后。多数联邦主体处于基本不协调阶段、高级协调的数量最少。（3）空间上,城镇化、生态环境、二者协调发展度均呈"西高东低"的格局特征,核心高值区分布在新西伯利亚州-阿尔泰边疆区-克麦罗沃州-克拉斯诺亚尔斯克边疆区-伊尔库茨克州的串联区,边缘低值区位于阿尔泰共和国和楚科奇自治区。最后探讨了促进俄东部城镇化和生态环境协调发展的具体对策。     

Genetic diversity of aboriginal and invasive populations of four‐eyed fir bark beetle Polygraphus proximus Blandford (Coleoptera,Curculionidae, Scolytinae)

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Variation of mitochondrial DNA in Far Eastern mullet pilengas, Liza haematocheilus Temminck and Schlegel, acclimatized in the Azov-Black Sea basin

This study continues the investigation of genetic variation in the populations of native and acclimatized in the Azov-Black Sea basin pilengas from the Sea of Japan. The previous comparison based on allozyme analysis was supplemented by analysis of restriction polymorphism of a mitochondrial DNA fragment containing the cytochrome b gene and the D-loop. Five out of fifteen tested endonucleases detected polymorphic sites. In the samples of native and acclimatized pilengas, five common haplotypes were found; ten and three “unique” haplotypes were detected in the Far Eastern and the Azov populations, respectively. The differences in haplotype distributions between these populations were highly significant (P < 0.001). The mtDNA variation was lower in the Azov than in the Far Eastern population (haplotype diversity μ respectively 6.35 ± 0.27 and 9.14 ± 0.55), which is in good agreement with the decrease in the number of polymorphic loci and the mean number of alleles per locus, found earlier for allozyme markers in this population. The reasons for these differences in the acclimatized population are discussed.     

Karyological and allozyme variability of Far Eastern voles Microtus fortis Büchner, 1889 (Cricetidae, Rodentia) from the Russian Far East

Karyological (G-, C-, and NOR-banding) and allozyme analyses were carried out for island and continental populations of the vole Microtus fortis from the Far East of Russia. Variability of the autosome pair 7 was found. The presence of variation in the number of telomere heterochromatin blocks in the populations of Far Eastern voles was confirmed. NOR-staining of the Far Eastern vole chromosomes was carried out, showin stability of the number and the positions of the nucleolus organizer regions. Ten enzyme systems and three nonenzyme proteins (controlled in total by 25 interpretable loci) were examined in the Far Eastern vole from the island and continental populations. All of the loci were shown to be monomorphic, except for one esterase locus, which exhibited polymorphism at the intrapopulation and interpopulation levels. The issue of distribution of the Far Eastern vole subspecies is discussed. It is suggested that M. fortis pelliceus occurs not only in the Russian Far East, but also in Northern Transbaikalia.     

Karyological and allozyme variability of far eastern voles Microtus fortis Büchner, 1889 (Cricetidae, Rodentia) from the Russian Far East

Karyological (G-, C-, and NOR-banding) and allozyme analyses were carried out for island and continental populations of the vole Microtus fortis from the Far East of Russia. Variability of the autosome pair 7 was found. The presence of variation in the number of telomere heterochromatin blocks in the populations of Far Eastern voles was confirmed. NOR-staining of the Far Eastern vole chromosomes was carried out, showing stability of the number and the positions of the nucleolus organizer regions. Ten enzyme systems and three non-enzyme proteins (controlled in total by 25 interpretable loci) were examined in the Far Eastern vole from the island and continental populations. All of the loci were shown to be monomorphic, except for one esterase locus, which exhibited polymorphism at the intrapopulation and interpopulation levels. The issue of distribution of the Far Eastern vole subspecies is discussed. It is suggested that M. fortis pelliceus occurs not only in the Russian Far East, but also in Northern Transbaikalia.     

Analysis of the variability of the control region and cytochrome b gene of mtDNA of Capreolus pygargus Pall

Analysis the of cytochrome b gene (1140 b.p.) polymorphism and polymorphism of 79 specimens of the control region (934 b.p.) of mtDNA of the Siberian roe deer Capreolus pygargus from 23 regions of Russia and Kazakhstan has been carried out. The combined alignment of two fragments of mitochondrial DNA revealed 36 haplotypes, which are distributed in three haplogroups. The net distance was 0.8, 1.3, and 1.3%. The specific pattern of haplogroups was described for roe deer of each region (Ural, trans-Ural, Eastern Siberia, Far East, Northeastern China). Unrelated haplogroups were found in populations of the Urals and Siberia. The variation pattern and spatial distribution of mitochondrial lines allowed us to suggest that a haplogroup that initially belongs to C. p. tianschanicus occurs secondarily in C. p. pygargus.     

Siganidae,a new family of fishes for the Russian fauna

A representative of the family Siganidae, Mottled spinefoot (Siganus fuscescens), has been found for the first time in Russian waters. It is a Pacific, subtropical-equatorial, and Asian wide-ranging species: from the southern part of the Korean Peninsula and Japan to Papua New Guinea and Australia. In September 2013, it was collected in Far Eastern State Marine Reserve, Far East Branch, Russian Academy of Sciences, near Ostrovok Fal’shivyi Cape (42°26′ N, 130°47′ E).     

Dental polymorphism of the raccoon dog in indigenous and invasive populations: internal and external causation

In total, 721 specimens from eight populations of the raccoon dog Nyctereutes procyonoides across native and colonized areas have been studied. The most polymorphic populations inhabit the European part of Russia and a part of the native area. The raccoon dog from Eastern Poland and the Primorie Far East is characterized by low intrapopulational variability. Quantitative genetic variations in the studied populations indicate a relatively higher level in the population from the Primorie Far East compared to the Southern Vologda and Eastern Poland. The pattern of morphological variability in the raccoon dog is shaped by such factors as the latest phylogenetic history of the species and the structure of the morphotype frequency in the time of the divergence of the populations on both micro-and macro-geographic levels. The influence of geographic and climatic factors forms a well-pronounced trend towards diversification in tooth morphology, which is most probably the consequence of adaptations to changes in the food niche.     

Phylogeography of the Siberian newt Salamandrella keyserlingii by mitochondrial DNA sequence analysis

Differentiation of geographical populations of the Siberian newt Salamandrella keyserlingii throughout the species range was analyzed using a fragment of the cytochrome b gene. The population of the Primorye region (Russian Far East) is separated to the greatest extent; the Japanese and South Kuril populations are the next most separate. These populations are possibly subspecies. Geographical differentiation of populations in the Siberian part of the species range is lower, lacks a clinal variation, and is irregular. The molecular variation of S. keyserlingii supports the hypothesis that several primary vicarious refugia of pre-Pleistocene differentiation of a common ancestor of Salamandrella occurred in the southeastern part of its current distribution range and that northern and western regions were gradually colonized via repeated steps of expansion and retreat in the Siberian part of the modern species range.     

Population structure of chum salmon Oncorhynchus keta in the Russian Far East, as revealed by microsatellite markers

Chum salmon populations in the Russian Far East have a complex multi-level genetic structure. A total of 53 samples (2446 fish) were grouped into five major regional clusters: the southern Kurils, eastern Sakhalin, southwestern Sakhalin, the Amur River, and a northern cluster. The northern cluster consists of chum salmon populations from a vast geographical region, including Chukotka, Kamchatka, and the continental coast of the Sea of Okhotsk. However, the degree of its genetic differentiation is low, 1.9%. In contrast, the southern population cluster exhibits much higher variation; for example, differentiation between chum salmon groups within Sakhalin Island reaches 4.6%, and the differentiation between Iturup Island and Sakhalin Island chum salmon is 7.7%. This suggests that southern populations of Asian chum salmon have a more ancient evolutionary history than northern populations. In contrast to the available data, our study indicates a great deviation of southwestern Sakhalin populations from other Sakhalin chum salmon. The Russian Far East chum salmon are genetically diverse and show statistically significant differentiation even within small geographic localities. This can be used to assign samples of unknown origins to definite local populations.     

Phylogeography of the Siberian newt (Salamandrella keyserlingii) by mitochondrial DNA sequence analysis

Differentiation of geographical populations of the Siberian newt Salamandrella keyserlingii throughout the species range was analyzed using a fragment of the cytochrome b gene. The population of the Primorye region (Russian Far East) is separated to the greatest extent; the Japanese and South Kuril populations are the next most separate. These populations are possibly subspecies. Geographical differentiation of populations in the Siberian part of the species range is lower, lacks a clinal variation, and is irregular. The molecular variation of S. keyserlingii supports the hypothesis that several primary vicarious refugia of pre-Pleistocene differentiation of a common ancestor of Salamandrella occurred in the southeastern part of its current distribution range and that northern and western regions were gradually colonized via repeated steps of expansion and retreat in the Siberian part of the modem species range.     

Morphotype analysis of the sibling vole (Microtus rossiaemeridionalis) casually introduced to the Russian Far East

Here, we present the morphotypic variety of the m1 and M3 teeth diagnostics for the recently formed isolated population of the sibling vole in Far Eastern Russia. In the Far Eastern population, the prevalence of the individuals with m1 with a complicated crown of the forward unpaired loop of the paraconid is characteristic. Namely, m1 in these individuals shows well-expressed sixth exterior and fifth interior salient angles. The structure of the M3 morphotypes is also unique in the sibling voles in Far Eastern Russia. The dominant morphotypes were typica (47 %) and simplex (45 %), whereas the abundance of the duplicata morphotype was 0.08 %. The frequencies of various m1 and M3 morphotypes found in casually introduced sibling voles in the Far East are not typical of any previously studied Microtus rossiaemeridionalis population.     

Conservation genetics of the Far Eastern leopard (Panthera pardus orientalis)

The Far Eastern or Amur leopard (Panthera pardus orientalis) survives today as a tiny relict population of 25-40 individuals in the Russian Far East. The population descends from a 19th-century northeastern Asian subspecies whose range extended over southeastern Russia, the Korean peninsula, and northeastern China. A molecular genetic survey of nuclear microsatellite and mitochondrial DNA (mtDNA) sequence variation validates subspecies distinctiveness but also reveals a markedly reduced level of genetic variation. The amount of genetic diversity measured is the lowest among leopard subspecies and is comparable to the genetically depleted Florida panther and Asiatic lion populations. When considered in the context of nonphysiological perils that threaten small populations (e.g., chance mortality, poaching, climatic extremes, and infectious disease), the genetic and demographic data indicate a critically diminished wild population under severe threat of extinction. An established captive population of P. p. orientalis displays much higher diversity than the wild population sample, but nearly all captive individuals are derived from a history of genetic admixture with the adjacent Chinese subspecies, P. p. japonensis. The conservation management implications of potential restoration/augmentation of the wild population with immigrants from the captive population are discussed.