Yanliaoa, an extinct genus of Cupressaceae s. l. from the Middle Jurassic,northeastern China

Yanliaoa is a common fossil in the Middle Jurassic of western Liaoning, eastern Inner Mongolia and northern Hebei Province, China. It is an important element of the Yanliao biota. The genus was established by Pan in 1977 for fossil plants from the Middle Jurassic Haifanggou Formation in Xiasanjiaochengzi, western Liaoning Province, and in present paper, the genus Yanliaoa is studied based on new material. Pan never designated a type specimen and his fossil material cannot be located. We designate a type specimen here for Yanliaoa, so that the genus name Yanliaoa remains valid. Yanliaoa sinensis Pan emend. Tan et al., is found in the same locality and formation as the lost specimens, Y. sinensis of Pan, 1977. Yanliaoa daohugouensis n. sp., a new species with epidermal anatomy, is from the Middle Jurassic Daohugou, Inner Mongolia. A holotype is also selected from the new material for this new species. Characters of the leafy shoots and ovulate cones of Yanliaoa are emended. The epidermal anatomy of this genus is described for the first time. Compared with other extant and extinct species of Cupressaceae s. l., the current species can be distinguished from any known species both by the leafy shoot characters and its epidermal anatomy. It further indicates that Yanliaoa is an extinct and endemic conifer found in the Middle Jurassic of northeastern China.     

The thioredoxin system in the dental caries pathogen Streptococcus mutans and the food-industry bacterium Streptococcus thermophilus

The Streptococcus genus includes the pathogenic species Streptococcus mutans, the main responsible of dental caries, and the safe microorganism Streptococcus thermophilus, used for the manufacture of dairy products. These facultative anaerobes control the levels of reactive oxygen species (ROS) and indeed, both S. mutans and S. thermophilus possess a cambialistic superoxide dismutase, the key enzyme for a preventive action against ROS. To evaluate the properties of a crucial mechanism for repairing ROS damages, the molecular and functional characterization of the thioredoxin system in these streptococci was investigated. The putative genes encoding its protein components in S. mutans and S. thermophilus were analysed and the corresponding recombinant proteins were purified. A single thioredoxin reductase was obtained from either S. mutans (SmTrxB) or S. thermophilus (StTrxB1), whereas two thioredoxins were prepared from either S. mutans (SmTrxA and SmTrxH1) or S. thermophilus (StTrxA1 and StTrxA2). Both SmTrxB and StTrxB1 reduced the synthetic substrate DTNB in the presence of NADPH, whereas only SmTrxA and StTrxA1 accelerated the insulin reduction in the presence of DTT. To reconstitute an in vitro streptococcal thioredoxin system, the combined activity of the thioredoxin components was tested through the insulin precipitation in the absence of DTT. The assay functions with a combination of SmTrxB or StTrxB1 with either SmTrxA or StTrxA1. These results suggest that the streptococcal members of the thioredoxin system display a direct functional interaction between them and that these protein components are interchangeable within the Streptococcus genus. In conclusion, our data prove the existence of a functioning thioredoxin system even in these microaerophiles.     

Morphology and Molecular Phylogeny of a New Hypotrich Ciliate,Pseudourostyla guizhouensis sp. nov. from Southern China,with Notes on a Chinese Population of Hemicycliostyla franzi (Foissner, 1987) Paiva et al., 2012 (Ciliophora,Hypotricha)

The morphology and molecular phylogeny of a soil hypotrich ciliate, Pseudourostyla guizhouensis sp. nov., collected from southern China, were investigated. Pseudourostyla guizhouensis sp. nov. has an elongate elliptical body measuring 180–310 × 65–85 μm in vivo; invariably two right and three or four left marginal rows; six or seven dorsal kineties; adoral zone consisting of 57–70 membranelles; 12–16 frontal cirri, one buccal cirrus, 13–20 midventral pairs, two frontoterminal cirri, two pretransverse cirri, and five to seven transverse cirri. Morphogenesis during physiological regeneration indicates that the marginal rows of each side originate from a common anlage that differentiates into several rows. Molecular phylogenetic analysis based on SSU rDNA sequence data reveals that P. guizhouensis sp. nov. clusters with the type species P. cristata (Jerka‐Dziadosz, 1964) Borror, 1972 and that the genus Pseudourostyla is monophyletic. The morphological characters of another soil hypotrich ciliate, Hemicycliostyla franzi (Foissner, 1987) Paiva et al., 2012, are also described based on a Chinese (Guizhou) population.     

Isolation of a heavy metal-resistant 4-Chloronitrobenzene degrader Cupriavidus sp. D4 and cloning of its cnb genes

Strain D4 was isolated from the sludge of the wastewater treating system of a 4-Chloronitrobenzene (4-CNB) manufacturer. It was able to utilize 4-CNB as the sole carbon and nitrogen source for growth. Strain D4 was preliminarily identified as Cupriavidus sp. based on its physiological & biochemical characteristics and 16S rRNA gene sequence analysis. It could completely degrade 300 mg L⁻¹ of 4-CNB within 25 h under the condition of 30 °C and pH 7.0. Strain D4 could also degrade 4-CNB in presence of heavy metals including Co²⁺, Cd²⁺, Pb²⁺, Zn²⁺, Mn²⁺and so on, therefore it was an excellent candidate for the bio-treatment of 4-CNB and heavy metals co-contaminated environments. The main 4-CNB degrading related genes (cnb A, B, Cab, D, G, Z) and arsenate resistance gene fragment of strain D4 were cloned, sequenced and analyzed, which showed high similarity with the corresponding genes of a reported 4-CNB-degrader, strain CNB-1. The cnb genes of strain D4 were located on two plasmids. This is the first report on the degradation of 4-CNB by the strain from the genus of Cupriavidus sp.     

Thermoregulation in male western cicada killers (Sphecius grandis Say) in the Chihuahuan desert

(1) Male western cicada killers (Sphecius grandis) had elevated, apparently regulated, thorax temperatures during territorial patrolling. (2) Abdomen temperature increased steeply with increasing ambient temperature, approaching thorax temperature when ambient temperature exceeded 35 °C. (3) Both indirect evidence and heating experiments demonstrated the apparent ability to shunt heat from thorax to abdomen. (4) Dead, dry wasps reached lethal temperatures when placed in full sunlight on the bare ground, and substantially lower temperatures on plants. (5) The percentage of males perching was extremely low, occurring primarily during early morning hours. Most perching occurred on plants, and very little on the ground. (6) In contrast to what has been reported for eastern cicada killers (Sphecius speciosus), S. grandis males did not appear to use sophisticated behaviors to regulate body temperature during territorial defense, relying primarily on physiological mechanisms. (7) This strategy may be more appropriate for S. grandis in the hotter, drier environment of the lowland Chihuahuan desert.     

First record of the insect pathogenic alga Helicosporidium sp. (Chlorophyta: Trebouxiophyceae) infection in larvae and pupae of Rhizophagusgrandis Gyll. (Coleoptera, Rhizophaginae) from Turkey

The predator beetle Rhizophagus grandis Gyll. (Coleoptera, Rhizophaginae) is one of the most important biological control agents, mass-bred and used to suppress populations of an important pest: the great spruce bark beetle, Dendroctonus micans. The achlorophyllous alga Helicosporidium sp. was first discovered in the pest. Later it was also found in the predator, but only in the adults. In this study, the pathogenic alga Helicosporidium sp. was discovered in larvae and early pupae of R. grandis for the first time. The morphological characteristics of the pathogenic alga were revealed by light and electron microscopy. Infection rates of Helicosporidium sp. in the larvae and pupae of R. grandis were 23.5% and 6.25%, respectively.     

Pancreatonema torriensis gen. nov., sp. nov. (Nematoda: Rhabdochonidae) from the pancreatic duct of Raja naevus

A new genus and species of nematode, Pancreatonema torriensis, from the pancreatic duct of Raja naevus caught off Aberdeen and north-west Scotland is described and aspects of its biology are discussed. According to the classification of Skrjabin, Sobolev & Ivashkin (1967) [Spirurata of animals and man and the diseases caused by them (4). Essentials of Nematodology, Vol. 16 (I.P.S.T. Translation No. 5904, Jerusalem, 1971)]it belongs to the family Rhabdochonidae, sub-family Prosungulonematinae, and is closely related to the genus Johnstonmawsonia. The taxonomy of the Prosungulonematinae is confused but it is suggested that Johnstonmawsonia should at present be restricted to those species of the genus described from marine teleosts, and that the species from freshwater teleosts should be included in the genus Prosungulonema.     

Multiple components in ink of the sea hare Aplysia californica are aversive to the sea anemone Anthopleura sola

Sea hares of the genus Aplysia rely on an array of behavioral and chemical defenses, including the release of ink and opaline, to protect themselves from predation. While many studies have demonstrated that ink and opaline are repellent to predators, very little is known about which components of these secretions are active against predators. Ink was previously shown to facilitate the escape of Aplysia from predatory anemones (Anthopleura) by eliciting tentacle retraction and/or shriveling, and gastrovascular eversion, but the metabolites mediating this interaction were not identified. We investigated the metabolites in Aplysia californica secretions that were aversive to the anemone Anthopleura sola, as demonstrated by tentacle shriveling and/or retraction. We found that ink elicited tentacle shriveling and/or retraction, while opaline elicited a feeding response. The active components in ink do not appear to be diet-dependent, as ink was aversive regardless of diet (natural seaweed diet vs. Gracilaria ferox). Furthermore, metabolites extracted from G. ferox were not aversive, suggesting that the aversive components are produced by the sea hares. We then examined escapin, a protein in ink with antimicrobial properties. Escapin quickly forms reaction products when mixed with the amino acids l-lysine and l-arginine, which would occur when ink and opaline are released into the sea hare mantle cavity. Neither escapin alone nor escapin mixed with its amino acid substrate l-lysine elicited aversive behaviors either immediately before or 2 min before applying to the tentacles. In addition, escapin mixed with opaline and applied to tentacles after 2 min did not elicit a significant aversive response. Using bioassay-guided fractionation, we attempted to isolate the components in A. californica ink that are aversive to A. sola. We determined that multiple components in ink, including both lipophilic and hydrophilic constituents, elicited aversive responses. We hypothesize that these components may facilitate A. californica's escape from A. sola by eliciting tentacle shriveling and/or retraction, which lead to anemones dropping ensnared sea hares.     

Selenopeltis (Trilobita) from Brittany and its distribution in the ordovician

The distribution of the genus SelenopeltisHawle & Corda throughout the Selenopeltis Province shows the presence during the Arenig of northern and southern species «groups, and a Llandeilo migration of the latter is identified within the Median Armorican synclinorium. New material of S. macrophthalmus (Kloucek) is described from Brittany together with S. gallicus gallicus nov. sp., nov. subsp. and S. gallicus irroratus nov. sp., nov. subsp.     

New insights into skeletal morphology of the oldest known silicoflagellates: Variramus, Cornua and Gleserocha gen. nov.

Two of the oldest known silicoflagellate-bearing sediments, lower Albian at Ocean Drilling Program Site 693 in the Weddell Sea of Antarctica and Santonian in the Devon Island sequence of the Canadian Archipelago, are re-examined with a focus on silicoflagellate genera Variramus, Cornua, and Gleserocha that lack basal rings, a feature appearing during late Santonian/early Campanian time within the genus Corbisema. The extraordinary variability of Variramus aculeifera is studied, and a new genus Gleserocha is proposed for taxa with apical structures made of three struts, but without pikes. This new genus includes previously described Variramus wisei and Cornua tapiae and new species G. harrisonii, and is here proposed as a genus transitional between Variramus and Cornua. Two unusual new species of Cornua, C. deflandrei and C. witkowskiana, are also described and a revised terminology is proposed for the skeletal components of Cornua and closely related genera.     

A new species of Spirobrachia (Pogonophora) from the Orkney Trench (Antarctica)

Spirobrachia orkneyensis sp. nov. is described from the Orkney Trench to the east of the South Orkney Islands from a depth of 6130–6420 m. It differs from the congeneric species S. grandis (Ivanov 1952) and S. leospira (Gureeva 1975) in the structure of the tube, i.e. shorter segmental collars, peculiarities of their arrangement throughout the tube, and multi-layered, light-coloured tube wall with wrinkles in its inner layers. Also, the wings of the spermatophores of the new species are much larger than those of the two other species of the genus, while most other size characteristics, including the length of the spermatophores, the size of the cuticular plaques, the number of the tentacles and the diameter of the tube, are intermediate between those of S. grandis and S. leospira. A key to the genera and species of the family Spirobrachiidae is provided. Accepted: 31 January 2000     

Evolutionary relatedness of mackerels of the genus Scomber based on complete mitochondrial genomes: Strong support to the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as distinct species

Mackerels of the genus Scomber are commercially important species, but their taxonomic status is still controversial. Although previous phylogenetic data support the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as separate species, it is only based on the analysis of partial mitochondrial and nuclear DNA sequences. In an attempt to shed light on this relevant issue, we have determined the complete mitochondrial DNA sequence of S. colias, S. japonicus, and Scomber australasicus. The total length of the mitogenomes was 16,568 bp for S. colias and 16,570 bp for both S. japonicus and S. australasicus. All mitogenomes had a gene content (13 protein-coding, 2 rRNAs, and 22 tRNAs) and organization similar to that observed in Scomber scombrus and most other vertebrates. The major noncoding region (control region) ranged between 865 and 866 bp in length and showed the typical conserved blocks. Phylogenetic analyses revealed a monophyletic origin of Scomber species with regard to other scombrid fish. The major finding of this study is that S. colias and S. japonicus were significantly grouped in distinct lineages within Scomber cluster, which phylogenetically constitutes evidence that they may be considered as separate species. Additionally, molecular data here presented provide a useful tool for evolutionary as well as population genetic studies.     

Molecular data reveal a new species of Seuratascaris Sprent, 1985 (Nematoda: Ascaridoidea) from Quasipaa exilispinosa (Liu & Hu) (Amphibia: Anura)

The genus Seuratascaris Sprent, 1985 is a group of obligate nematode parasites of amphibians. In the present study, a new species of Seuratascaris, S. physalis sp. n. was described using light and scanning electron microscopy based on specimens collected from Quasipaa exilispinosa (Liu & Hu) (Amphibia: Anura) in China. The new species differs from S. numidica (Seurat, 1917) by the cuticle of the cervical region distinctly inflated to form a cephalic vesicle-like structure and the absence of single medio-ventral precloacal papilla. The molecular characterization of the nuclear large ribosomal DNA (28S) and internal transcribed spacer (ITS) and the mitochondrial cytochrome c oxidase subunit 1 (cox1), cytochrome c oxidase subunit 2 (cox2) and 12S small subunit ribosomal RNA gene of S. physalis sp. n., together with the 28S, cox2 and 12S of S. numidica are provided for the first time. Molecular analysis revealed the presence of high level of interspecific genetic variation between the two species in the ITS (5.50%), cox1 (13.3%), cox2 (10.6%) and 12S regions (10.5%), which strongly supported that S. physalis sp. n. represented a different species from S. numidica. Angusticaecum ranae Wang, Zhao & Chen, 1978 reported from the frog Quasipaa spinosa (David) (Anura: Dicroglossidae) in China was transferred into the genus Seuratascaris as S. ranae (Wang, Zhao & Chen, 1978) comb. n. based on the morphology of lips and the presence of very short and robust spicules without alae and small numbers of precloacal papillae. The present study provided useful genetic data for molecular identification of species of Seuratascaris and provides the foundation for being able to determine if S. numidica represents a species complex of some sibling species or a single species.     

Architecture and function of the lophophore in the problematic brachiopod Heliomedusa orienta (Early Cambrian, South China)

The detailed structure of the lophophore is a key diagnostic character in the definition of higher brachiopod taxa. The problematic Heliomedusa orienta Sun and Hou, from the Lower Cambrian Chengjiang Lagerstätte of Yunnan, southwestern China, has a well-preserved lophophore, which is unlike that of any known extant or extinct brachiopods. Based on a comparative study of lophophore disposition in H. orienta and the extant discinid Pelagodiscus atlanticus, the in- and excurrent pattern and shell orientation of H. orienta are described and discussed. Reconstructions of lophophore shape and function are based on numerous specimens and comparison with P. atlanticus. The lophophore is composed of a pair of lophophoral arms that freely arch posteriorly rather than coiling anteriorly as commonly seen in fossil and recent lingulids. The lophophore is attached to the dorsal lobe of the mantle; it has neither calcareous nor chitinous supporting structures, and is disposed symmetrically on either side of the valve midline. The mouth can be inferred to be located at the base of the two brachial tubes, slightly posterior to the anterodorsal projection of the body wall. The lophophoral arms bear laterofrontal tentacles with a double row of cilia along their lateral edge, as in extant lingulid brachiopods. The main brachial axes are also ciliated, which presumably facilitated transport of mucous-bound nutrient particles to the mouth. The unique organization of the lophophore in Heliomedusa is not like any known fossil and living brachiopods. This clearly demonstrates that H. orienta is not a member of any crown group. It is here considered as a member of the brachiopod stem group, which challenges recent interpretations of a close discinid affinity.     

Taxonomy of the genus Laena from Yunnan in China,with description of eight new species (Coleoptera: Tenebrionidae: Lagriinae)

Eight new species of the genus Laena Dejean, 1821 (subfamily Lagriinae, tribe Laenini) from Yunnan Province of China were described and illustrated: L. acutidentata Wei & Ren, sp. nov., L. brevicarina Wei & Ren, sp. nov., L. dongchuana Zhao & Ren, sp. nov., L. glabridentipa Wei & Ren, sp. nov., L. nuda Zhao & Ren, sp. nov., L. raropuncta Wei & Ren, sp. nov., L. rugulosa Wei & Ren, sp. nov. and L. spinicla Wei & Ren, sp. nov.. Illustrations and a key to the known Laena species from Yunnan Province are provided.www.zoobank.org/urn:urn:lsid:zoobank.org:pub:FDEDA1E8-2F2E-4732-8DB4-FE2D7BDC75D8.     

巨桉根系分解对菊苣生长及光合特性的影响

巨桉是我国退耕还林过程中采用的重要速生树种之一,被广泛用于人工造林。采用盆栽试验,研究了巨桉根系分解初期对菊苣幼苗生长和光合生理特性的影响。试验设置A1(50 g/盆)、A2(100 g/盆)和对照(CK)3个根系水平,将各处理的根系分别与10 kg土壤混合后装盆,播种菊苣。待A2处理植株的第3片真叶完全展开后测定菊苣光合生理指标及相关生长指标。结果表明:在巨桉根系分解初期,明显抑制了菊苣高生长、根生长、生物量积累、叶面积扩展及光合色素的合成,且随着根系添加量的增加抑制作用加大;菊苣叶片胞间CO2浓度(Ci)增加,而净光合速率(Pn)、气孔导度(Gs)和蒸腾速率(Tr)均显著低于对照;随土壤中根系含量的增加,除CO2补偿点(CCP)呈增加趋势外,其他光响应和CO2响应的特征参数均呈明显的下降趋势,并与对照差异显著;各生长指标除与胞间CO2浓度呈现出负相关外,与其它光合特征参数、光合色素以及相应的响应曲线参数之间均呈现出显著或极显著的正相关关系;通过GC-MS检测表明,巨桉根系中含有2,6-二叔丁基对甲酚、N-甲基苯乙胺等多种具有化感潜力化学物质,在其分解过程中,这些化感物质逐步释放并作用于受体植物,抑制其光合色素合成和光合作用,降低其环境适应能力,从而抑制菊苣的生长。