Assessing resource and predator effects on habitat use of tropical small carnivores

Habitat use of animals is influenced by a combination of factors including food abundance and interactions with other species. Animals typically must forage while simultaneously avoiding predation from multiple potential predators, but habitat use in tropical forest ecosystems that assesses effects of both predation risk and resources has rarely been conducted. We used camera traps and occupancy analyses to document small mammalian carnivore occurrence in relation to food abundance and interactions with large predators. We hypothesized that habitat use of six small mammalian carnivores (≤15 kg) would be influenced by (1) abundance of resources (fruit, rodents, and streams) and/or (2) large predators. Predictions regarding food and habitat resources were only supported for one species (crab-eating mongoose, Urva urva), which was positively associated with rodents and streams. Three small carnivores (masked palm civet Paguma larvata, common palm civet Paradoxurus hermaphroditus, yellow-throated marten Martes flavigula) were affected negatively by leopard and mesopredators as predicted. Counter to our predictions, two species (masked palm civet and yellow-throated marten) showed spatial avoidance of tiger suggesting that an apex predator might also pose predation risk to small carnivores. The focal small carnivores and large predators of this study appeared to have moderately to highly overlapping temporal activity indicating no temporal avoidance. In conclusion, food resources appeared to have minimal effects for six small carnivores in this ecosystem probably due to continuous resource availability. Predation risk appeared to affect some species in terms of spatial occupancy but not in temporal activity, indicating perhaps complex, but not entirely negative interactions between larger carnivores and this guild of small carnivores. The mechanisms which facilitate co-occurrence between small carnivores and large predators may, however, operate at finer spatiotemporal scales than we investigated here.     

Food choice and feeding on carrion in two African mongoose species in an urban environment

Urbanisation negatively affects many species, yet small carnivores may flourish in urban spaces because of accessible resources and a reduction of predators. Food choices of urban carnivores might be influenced by the availability and abundance of anthropogenic food resources and the co-existence of competing species. We studied the food selection and feeding on carrion of the yellow mongoose (Cynictis penicillata) and slender mongoose (Galerella sanguinea) in a small urban reserve in South Africa. In cafeteria-style food choice tests, both species preferred meat and insects over bread, dog kibble, chicken eggs, and plants; however, yellow mongoose in a more urbanised area preferred bread to insects. Yellow mongoose had a shorter latency to approach and consume provided food compared to slender mongoose. At carrion-baited stations, slender mongoose were more prevalent at carcasses and displayed aggression and competitive exclusion of yellow mongoose. Slender mongoose fed more on carcasses during the colder months than warmer months when they fed on available insects around and on carcasses. The greater consumption of anthropogenic items by yellow mongoose and the preference by slender mongoose for feeding on carcasses provide evidence of possible resource partitioning, which may aid in the co-existence of these sympatric herpestids in urban areas.     

Interspecific responses of wild African carnivores to odour of 3-mercapto-3-methylbutanol,a component of wildcat and leopard urine

The scent of 3-mercapto-3-methylbutanol (3-M-3-MB), a volatile component of leopard (Panthera pardus) and domestic cat (Felis silvestris catus) urine, released at about 10 ng/s from slow-release dispensers, elicited scent-marking from African civet (Civettictis civetta), small-spotted genet (Genetta genetta) and slender mongoose (Galerella sanguinea), as well as African wildcat (F. s. cafra). A female leopard was apparently repelled by the scent. The scent-marking and scent-rubbing by species other than African wildcats and leopards were unexpected and have important implications for the design of studies to investigate chemical communication between wild mammals and the use of camera traps to estimate animal numbers. Videos showing the behaviours referred to in this article are available at; http://www.momo-p.com/showdetail-e.php?movieid=momo161223fs01a; http://www.momo-p.com/showdetail-e.php?movieid=momo161223gs01a; http://www.momo-p.com/showdetail-e.php?movieid=momo161223gg01a.     

Fruit consumption by carnivores in Mediterranean Europe

• 1 We reviewed patterns of fruit consumption amongst 10 species of mesocarnivores: red fox Vulpes vulpes, weasel Mustela nivalis, stoat Mustela erminea, polecat Mustela putorius, stone marten Martes foina, pine marten Martes martes, Eurasian badger Meles meles, common genet Genetta genetta, Egyptian mongoose Herpestes ichneumon and wildcat Felis silvestris in Mediterranean Europe.
• 2 The 65 reviewed studies recorded 79 different fruits eaten by carnivores, 58 of which were identified to species. Most records (63%) were of fleshy fruits with high pulp content. The frequency of occurrence of fruit items varied widely amongst species and regions. Four of the carnivore species (red fox, stone marten, badger and common genet) included more than 30 fruit species in their diet.
• 3 A longitudinal pattern was detected in the consumption of fruit in the Mediterranean region, with the frequency of occurrence of fruit consumption increasing towards the east.

     

Spatial and temporal adjustments allowing the coexistence among carnivores in Liguria (N-W Italy)

We investigated the seasonal spatial and temporal co-occurrence of three carnivore species in Liguria region (NW Italy)—the red fox (Vulpes vulpes), the European badger (Meles meles) and the wolf (Canis lupus)—using the information provided by camera-trapping monitoring. Data were collected from January 2013 to January 2015 by positioning camera traps in 200 sample stations. During 3479 trap days, we collected 1048 independent videos of target carnivore species, which revealed a general spatial coexistence among carnivores with some differences in seasonal occurrence of species. The red fox and the European badger showed temporal segregation, as their activity patterns suggested a differential use of night-time in all seasons. Activity patterns of the red fox and the wolf revealed moderate-high overlap and similar density distributions in all seasons except during winter. Coexistence between these species may be allowed by temporal segregation during winter and spatial segregation during spring. Finally, results regarding the European badger and the wolf suggest a moderate temporal segregation with a marked avoidance effect for the European badger induced by the presence of tracks left by wolves. Programmes aimed at carnivore conservation, and management should treat the entire guild, as it has been demonstrated that populations of different carnivores interact with each other in complex ways and that fine-scale mechanisms regulating carnivore assemblage influence different aspects of natural communities.     

Prevalence and Phylogenetic Analysis of <Emphasis Type="Italic">Bartonella</Emphasis> Species of Wild Carnivores and Their Fleas in Northwestern Mexico

The host–parasite–vector relationship of Bartonella spp. system in wild carnivores and their fleas from northwestern Mexico was investigated. Sixty-six carnivores belonging to eight species were sampled, and 285 fleas belonging to three species were collected during spring (April–May) and fall (October–November) seasons. We detected Bartonella species in 7 carnivores (10.6%) and 27 fleas (9.5%) through either blood culture or PCR. Of the 27 Bartonella-positive fleas, twenty-two were Pulex simulans, three were Pulex irritans and one was Echidnophaga gallinacea. The gltA gene and ITS region sequences alignment revealed six and eight genetic variants of Bartonella spp., respectively. These variants were clustered into Bartonella rochalimae, Bartonella vinsonii subsp. berkhoffii and another genotype, which likely represents a novel species of Bartonella spp. Although experimental infection studies are required to prove the vector role of P. simulans, our results suggest that this flea may play an important role in the Bartonella transmission. The results indicated possible host-specific relationships between Bartonella genotypes and the families of the carnivores, but further studies are needed to verify this finding. The presence of zoonotic species of Bartonella spp. in wild carnivores raises the issue of their potential risk for humans in fragmented ecosystems.     

Floral divergence and temporal pollinator partitioning in two synchronopatric species of <Emphasis Type="Italic">Vigna</Emphasis> (Leguminosae-Papilionoideae)

Exclusivity of pollinators, temporal partitioning of shared pollinators and divergence in pollen placement on the shared pollinators’ bodies are mechanisms that prevent interspecific pollen flow and minimize competitive interactions in synchronopatric plant species. We investigated the floral biology, flower visitors, pollinator effectiveness and seasonal flower availability of two syntopic legume species of the genus Vigna, V. longifolia and V. luteola, in ‘restinga’ vegetation of an island in southern Brazil. Our goal was to identify the strategies that might mitigate negative consequences of their synchronous flowering. Vigna longifolia and V. luteola were self-compatible, but depended on pollinators to set seeds. Only medium to large bees were able to trigger the ‘brush type’ pollination mechanism. Vigna longifolia, with its asymmetrical corolla and hugging mechanism, showed a more restrictive pollination system, with precise sites of pollen deposition/removal on the bee’s body, compared to V. luteola, with its zygomorphic corolla and cymbiform keel. There was a daily temporal substitution in flower visitation by the main pollinators. Vigna longifolia and V. luteola had overlapping flowering phenology but the densities of their flowers fluctuated, resulting in a seasonal partitioning of flower visitation. The differences in corolla symmetry and mainly the temporal partitioning among pollinators throughout the day and the flowering season proved to be important factors in maintaining the synchronopatry of V. longifolia and V. luteola.     

First assessment of the diet composition and trophic level of an assemblage of poorly known chondrichthyans off the central coast of Peru

Although chondrichthyans are conspicuously present in shallow waters, many ecological aspects of neritic species in the Humboldt Current System remain unknown. This study provides a first assessment of the diet of seven commercially exploited and understudied sympatric chondrichthyans inhabiting nearshore habitats off the central coast of Peru: four stingrays (Hypanus dipterurus, Myliobatis peruvianus, M. chilensis, and Urotrygon chilensis), a guitarfish (Pseudobatos planiceps), a smooth-hound shark (Mustelus mento), and a chimaera (Callorhinchus callorynchus). A total of 166 stomachs were examined between 2012 and 2015 and prey items were pooled for the total of years for analysis. Although our analysis did not account for inter seasons variability, our results suggest diet partitioning among species, except for the stingrays’ group. A diet based on soft-bottom polychaetes and fish was shared by H. dipterurus, M. peruvianus, and M. chilensis, while soft-bottom polychaetes and crabs were more important in U. chilensis. The smooth-hound shark and guitarfish exhibited a diet dominated by crabs, and the chimaera consumed mainly hard-bottom mollusks. Foraging habitat estimations distinguished two main habitats of association: Benthic, including the stingray U. chilensis, the chimaera, and the smooth-hound shark; and benthic-demersal, including the guitarfish, and the rest of stingrays. A pattern of feeding specialization was observed for H. dipterurus, P. planiceps, and C. callorynchus. Preliminary trophic level estimations based on diet composition placed these species as secondary consumers. Intraspecific dietary variation was assessed for P. planiceps and H. dipterurus as their sampled sizes allowed meaningful comparisons. The diet of P. planiceps varied from small to large sizes but not for H. dipterurus. No differences were detected on diet composition between males and females in either species. Despite the limited temporal resolution, this study provides the first insights of chondrichthyans predatory activity, suggesting diet partitioning among the species of this assemblage in a nearshore habitat of the central coast of Peru. Enhancing the temporal resolution of this type of studies would improve our knowledge on trophic functioning in the Humboldt Current ecosystem.     

Seasonal occupancy of sympatric larger carnivores in the southern San Andres Mountains,south-central New Mexico,USA

We investigated factors facilitating coexistence of pumas (Puma concolor), coyotes (Canis latrans), and bobcats (Lynx rufus) in the arid San Andres Mountains of south-central New Mexico, during the season (winter and spring, prior to the annual monsoon) of greatest resource stress. We established a camera-trapping grid in the San Andres, 2007–2011, and modeled occupancy of the three carnivores as a function of habitat, prey, and presence of the other carnivore species. Species interaction factors were >1.3 for each pair of carnivores, and the presence of the other carnivore species never significantly influenced occupancy of any other carnivore. Similarly, occupancy of the San Andres landscape was positively correlated among all carnivores. Occupancy of pumas was most influenced by proximity of water; coyote occupancy was influenced by terrain ruggedness and presence of medium (primarily lagomorph) prey, and bobcat occupancy was influence primarily small prey and proximity to water. The three carnivores also did not show temporal partitioning in use of habitats. Rather than segregation driven by competition, predation, or despotism, our results appeared to reflect preferences for differing habitat characteristics between ambush and cursorial predators and preferred habitats for travel.     

Cleaning up the grasses dustbin: systematics of the Arundinoideae subfamily (Poaceae)

Among the 12 subfamilies currently considered in the systematics of Poaceae, the Arundinoideae have long been considered as a dustbin group, with a diversity of forms putatively hiding incertae sedis. Because this subfamily has been poorly investigated using molecular markers for the last two decades, the present study provides the first complete phylogeny of the Arundinoideae based on five plastid DNA loci sequenced for 12 genera, and analysed with and without plastome data from previous studies. The refined Arundinoideae appear to be a robust evolutionary lineage of Poaceae, divided into three tribes with some biogeographical patterns: (1) tribe Arundineae, the most heterogeneous tribe, including Eurasian Arundo, Australian Amphipogon and Monachather, and South African Dregeochloa; (2) tribe Crinipedeae (described here), including Crinipes, Elytrophorus, Styppeiochloa and Pratochloa (described here), with a South and East African distribution; and (3) tribe Molinieae, including Hakonechloa, Molinia and Phragmites, with a Eurasian distribution. Despite reduction in size, this small subfamily conserves a high diversity of morphological forms, with several small but highly differentiated genera. Finally, the molecular dating approach provides an evolutionary framework to understand the diversification of Arundinoideae, refuting Gondwanan vicariance between genera and suggesting capability for long distance dispersal.     

Fleas (Siphonaptera) associated with mammals and birds in the Ciscaucasia

The flea fauna of the Ciscaucasia comprises 76 species, 13 of which are associated with birds and the rest, with mammals. Rodent parasites are the most numerous; fleas associated with carnivores, bats, and insectivores are less abundant. Fleas parasitize different species of birds of the orders Passeriformes, Anseriformes, Falconiformes, and Strigiformes. Among 41 flea genera known from the Caucasus, species of the genera Amalaraeus, Araeopsylla, Atyphloceras, Caenopsylla, Callopsylla, Doratopsylla, Paraneopsylla, Peromyscopsylla, Phaenopsylla, Tarsopsylla, and Wagnerina are absent in the Ciscaucasia. Only two subendemic species were revealed in the region; 33 flea species are distributed over the entire Ciscaucasia, while the distribution of others is limited to landscapes of one or two natural zones.     

The search for proteins involved in the formation of crustacean cuticular structures

Summer ichthyoplankton surveys were conducted in the northern Gulf of Mexico from 2007 to 2010 to characterize the distribution and abundance of tuna larvae. Larval assemblages of tunas were comprised of four genera: Thunnus, Auxis, Euthynnus, and Katsuwonus. Thunnus were the most abundant and four species were detected; T. atlanticus [blackfin tuna], T. obesus [bigeye tuna], T. albacares [yellowfin tuna], and T. thynnus [bluefin tuna]. Intra- and inter-annual variability in the distribution and abundance of Thunnus species were observed with higher densities in 2008 and 2009, with a decline in abundance observed in 2010. Distribution and abundance of Thunnus larvae were influenced by physical and chemical conditions of the water mass, notably sea surface temperature and salinity. Distinct species-specific habitat preferences were observed and the location of mesoscale oceanographic features influenced larval abundance with higher densities of T. atlanticus, T. obesus, and T. albacares near anticyclonic (warm core) regions and the Loop Current, while T. thynnus was observed in higher densities near cyclonic (cold core) regions. This study demonstrates that spatial and temporal variability in the location of mesoscale oceanographic features may be important to partitioning nursery habitat among Thunnus species.     

Female in the inside,male in the outside: insights into the spatial organization of a European wildcat population

Hybridization between the European wildcat, Felis silvestris silvestris, and the domestic cat, Felis silvestris catus, has been found in several European countries with different landscape structures and in various proportions. In this study, we focus on a local population of European wildcats in forests fragmented by agricultural lands in northeastern France. Our aim is to better understand how the spatial organization of the wildcats in this particular type of environment might impact the proportion of hybridization. We combined radio-tracking and genetics through the use of microsatellite markers in order to assess both the spacing pattern and the level of hybridization of this wildcat population. Hybridization is rare in this wildcat population with only one putative hybrid (most likely backcrossed) detected out of 42 putative wildcats. We found that most females were concentrated inside the forest while males stood in the periphery or outside the forest. Furthermore, many males and females resulted related. Such a spacing pattern might limit contacts between male domestic cats and female wildcats and can be one of the causes that explain the low level of hybridization in the wildcat population in this environment. We could not exclude the possibility of hybrid presence in the neighboring domestic cat populations. Our results yield new insights on the influence that the landscape configuration and the spacing pattern can have on genetic flow between the populations of the two subspecies.     

Effects of alien invasion by <Emphasis Type="Italic">Bombus terrestris</Emphasis> L. (Apidae) on the visitation patterns of native bumblebees in coastal plants in northern Japan

When alien pollinator species enter a native community of pollinators in which resource partitioning has been established, the pollination network between plants and pollinators may be modified through the interactions between the pollinators over the use of floral resources. We observed the floral-use patterns of native (Bombus hypocrita and B. deuteronymus) and alien (B. terrestris) bumblebee species in a coastal grassland in northern Japan. We analyzed the factors determining resource partitioning patterns. B. hypocrita tended to visit flowers with shallow or wide open corollas, such as Rosa rugosa, whereas B. deuteronymus visited flowers with complex or deeper corollas, such as Lathyrus japonicus. Given the wider floral preference of B. terrestris, floral use by the alien bumblebees consistently overlapped with that of native bumblebees. The visitation of B. terrestris to R. rugosa flowers was positively correlated with that of B. hypocrita. These bumblebee species frequently used similar floral resources, in part because of the large overlap in the seasonality of their foraging activity. The visitation frequency of B. deuteronymus to L. japonicus flowers was independent of the visitation frequency of other bumblebee species. The major visitation periods of the bumblebees to L. japonicus flowers reciprocally differed between B. deuteronymus and B. terrestris, suggesting phenological resource partitioning between these species. Our study suggests that phenological niche partitioning is more common in specialized flowers (L. japonicus) than in generalized flowers (R. rugosa).     

Carnivore mammals in a fragmented landscape in northeast of São Paulo State,Brazil

São Paulo is the most developed state in Brazil and little of its native vegetation remains. In Luiz Antonio and Santa Rita do Passa Quatro municipalities, only small fragments of cerrado (Brazilian savanna) physiognomies (cerradão, cerrado sensu stricto) and of semideciduous forest have been left, surrounded by eucalyptus silviculture and sugar-cane agriculture. However, that vegetation mosaic still shelters large mammals, including several carnivore species. To detect the carnivores present in such a mosaic area (50,000 ha), and to find out how they use the landscape, we recorded them through 21 camera traps and 21 track plots, during 18 months. Species richness, diversity and relative frequency were evaluated according to the habitat. Ten species were recorded, some of them locally threatened to extinction (Puma concolor, Leopardus pardalis, Chrysocyon brachyurus). Species diversity did not significantly differ among fragments, and although most species preferred one or another habitat, the carnivore community as a whole explored all the study area regardless of the vegetation cover; eucalyptus plantations were as used by the carnivores as the native fragments. Therefore, it seems possible to maintain such animals in agricultural landscapes, where some large native fragments are left and the matrix is permeable to native fauna.     

Feeding habits of the swordfish (<Emphasis Type="Italic">Xiphias gladius</Emphasis> Linnaeus, 1758) in the subtropical northeast Pacific

Most of the studies carried out in the past on economically important fish species rely on single species approach. Ecosystem dynamics are characterized by complex interaction among species, sharing common habitat needs and thus forming characteristic assemblages. The analysis of spatio-temporal variability of fish community, coupled to the analysis of spatial indices, provides a synthetic view of the fish community status evidencing, if any, the way a community changes. Such considerations drive also to the development of ecosystem-based fishery management paradigm. In the present study changes in pelagic fish community structure in an upwelling ecosystem of the central Mediterranean Sea during the last 10 years was analysed, by focusing the attention on the five most abundant small pelagic species: Engraulis encrasicolus, Sardina pilchardus, Sardinella aurita, Trachurus trachurus and Boops boops. Our results evidenced a quite stable community structure, characterized by spatial occupation strongly driven by ecosystem characteristics and modulated according to specie-specific behaviour. Obtained results lead us to hypothesize that the observed stability of community could be linked to the presence of different environments leading to efficient space partitioning and resources utilization among species.     

Feeding of pelagic fish in waters of Mauritania: 2. Representatives of Families Carangidae,Scombridae, Pomatomidae,and Trichiuridae

Feeding peculiarities of mass pelagic ichtyophagous fish from the Canary upwelling waters and frontal zones of Mauritania have been investigated: vadigo Campogramma glaycos, false scad Caranx rhonchus, bluefish Pomatomus saltatrix, Atlantic bonito Sarda sarda, West African Spanish mackerel Scomberomorus tritor, large-eyed hairtail Trichiurus lepturus and pompano Trachinotus ovatus. These species feed on epipelagic fish living or forming temporary agglomerations at the depths up to 200–250 m from the surface.     

Detection and Quantification of <Emphasis Type="Italic">Vibrio cholerae,Vibrio parahaemolyticus</Emphasis>, <Emphasis Type="Italic">and Vibrio vulnificus</Emphasis> in Coastal Waters of Guinea-Bissau (West Africa)

V. cholerae, V. parahaemolyticus, and V. vulnificus are recognized human pathogens. Although several studies are available worldwide, both on environmental and clinical contexts, little is known about the ecology of these vibrios in African coastal waters. In this study, their co-occurrence and relationships to key environmental constraints in the coastal waters of Guinea-Bissau were examined using the most probable number-polymerase chain reaction (MPN-PCR) approach. All Vibrio species were universally detected showing higher concentrations by the end of the wet season. The abundance of V. cholerae (ISR 16S-23S rRNA) ranged 0–1.2 × 10⁴ MPN/L, whereas V. parahaemolyticus (toxR) varied from 47.9 to 1.2 × 10⁵ MPN/L. Although the presence of genotypes associated with virulence was found in environmental V. cholerae isolates, ctxA+ V. cholerae was detected, by MPN-PCR, only on two occasions. Enteropathogenic (tdh+ and trh+) V. parahaemolyticus were detected at concentrations up to 1.2 × 10³ MPN/L. V. vulnificus (vvhA) was detected simultaneously in all surveyed sites only at the end of the wet season, with maximum concentrations of 1.2 × 10⁵ MPN/L. Our results suggest that sea surface water temperature and salinity were the major environmental controls to all Vibrio species. This study represents the first detection and quantification of co-occurring Vibrio species in West African coastal waters, highlighting the potential health risk associated with the persistence of human pathogenic Vibrio species.     

Cytotaxonomic notes on the generaIndigofera L. andCyamopsis DC.

Continuing cytotaxonomic research in the generaCyamopsis andIndigofera, this time with attention payed for the greater part to East Tropical African species yielded the following results:

1. 1.
   Except for four rather small subsections ofIndigofera proper and the related genusRhynchotropis Harms, information was obtained about all Taxa. Of the 283 species described inGillett'ss monograph, some 80 species, among them a few with subspecies and varieties, now have been cytologically examined.